>LOC_Os01g72330:12001.t06521:unspliced-genomic OsRR4 - Rice type-A response regulator, expressed|
Length = 3437
Score = 78.0 bits (164), Expect(7) = 2e-61
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2 / +2
Query: 458 AMTVVDAESRFHVLAVDDSVIDRKLIEMLLKTSSYQ 565
AMTVVDAESRFHVLAVDDS+IDRKLIEMLLK SSYQ
Sbjct: 407 AMTVVDAESRFHVLAVDDSLIDRKLIEMLLKNSSYQ 514
Score = 68.4 bits (143), Expect(7) = 2e-61
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +2 / +1
Query: 836 RCLEDGAEEFFLKPVKLADMKKLKSHLVR 922
RCLEDGAEEFFLKPVKLADMKKLKSHL++
Sbjct: 2599 RCLEDGAEEFFLKPVKLADMKKLKSHLLK 2685
Score = 57.4 bits (119), Expect(7) = 2e-61
Identities = 22/30 (73%), Positives = 27/30 (90%)
Frame = +1 / +1
Query: 100 EVKEGKSWRRFAVEIRVRDLVGSCFPGKKR 189
E ++ KSWRRFAVEIRV DLVGSCFPG+++
Sbjct: 52 EREKRKSWRRFAVEIRVCDLVGSCFPGRRK 141
Score = 56.1 bits (116), Expect(7) = 2e-61
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +2 / +1
Query: 761 VKGSSSLKDIPVVIMSSENVPARISRCLED 850
V+GSSSLKDIPVVIMSSENVPARI+R E+
Sbjct: 1063 VQGSSSLKDIPVVIMSSENVPARINR*AEN 1152
Score = 42.8 bits (87), Expect(7) = 2e-61
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2 / +1
Query: 566 VTTVDSGSKALEVLGLRDE 622
VTTVDSGSKALE+LGLRDE
Sbjct: 649 VTTVDSGSKALELLGLRDE 705
Score = 40.9 bits (83), Expect(7) = 2e-61
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +1 / +2
Query: 706 DHH*LLHAGHDRIRSAEEGQGVIL 777
D+H*LLHA HDR+ SA+EG+G L
Sbjct: 887 DNH*LLHAWHDRV*SAQEGEGKFL 958
Score = 24.9 bits (48), Expect(7) = 2e-61
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 1112 GSRKRKAAMMEQD 1150
GS KRKAA MEQ+
Sbjct: 2827 GSSKRKAAAMEQE 2865
Score = 73.5 bits (154), Expect(7) = 8e-57
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = -2 / -3
Query: 564 W*EEVLSSISMSFRSMTLSSTARTWNRDSASTTVMAR 454
W*+E LSSISMSF S+ LSSTARTWNRDSASTTVMAR
Sbjct: 513 W*DEFLSSISMSFLSIRLSSTARTWNRDSASTTVMAR 403
Score = 63.4 bits (132), Expect(7) = 8e-57
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = -2 / -1
Query: 846 SKHLLILAGTFSEDMITTGMSFSEDDPLT 760
S HLLILAGTFSEDMITTGMSF+EDDP T
Sbjct: 1148 SAHLLILAGTFSEDMITTGMSFNEDDPCT 1062
Score = 58.3 bits (121), Expect(7) = 8e-57
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = -2 / -1
Query: 918 TR*DLSFFMSASFTGLRKNSSAPSSKHL 835
+R*DLSFFMSAS TG RKNSSAPSSKHL
Sbjct: 2681 SR*DLSFFMSASLTGFRKNSSAPSSKHL 2598
Score = 48.3 bits (99), Expect(7) = 8e-57
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = -3 / -1
Query: 176 GKQDPTRSRTRISTANRLHD 117
GKQDPTRS TRISTANRLHD
Sbjct: 128 GKQDPTRSHTRISTANRLHD 69
Score = 46.4 bits (95), Expect(7) = 8e-57
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = -2 / -2
Query: 762 TLLSRSYPVMPGMQ*SVMIKFTPTS 688
TLLSRSYPVMPGMQ*SV+I+ T S
Sbjct: 943 TLLSRSYPVMPGMQ*SVIIRLTSIS 869
Score = 35.9 bits (72), Expect(7) = 8e-57
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -2 / -1
Query: 615 LNPSTSSALLPESTVVT 565
LNPS+S ALLPESTVVT
Sbjct: 698 LNPSSSKALLPESTVVT 648
Score = 27.2 bits (53), Expect(7) = 8e-57
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2 / -1
Query: 1149 SCSIIAAFLFLLP 1111
SCSI AAFL LLP
Sbjct: 2864 SCSIAAAFLLLLP 2826
Score = 67.0 bits (140), Expect(4) = 2e-27
Identities = 23/38 (60%), Positives = 30/38 (78%)
Frame = -1 / -2
Query: 547 EQHLDELPVDDAVVHRQDVEPGLGVHHRHGASRQEEEP 434
EQHLDELPVD A++HR+D+EP L ++HRHG +R P
Sbjct: 496 EQHLDELPVDQAIIHREDMEPRLRINHRHGETRTRRNP 383
Score = 46.9 bits (96), Expect(4) = 2e-27
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / -3
Query: 174 KAGSDQITDPNLHSKSPP*FP 112
KA SDQIT PNLHSKSPP*FP
Sbjct: 126 KARSDQITHPNLHSKSPP*FP 64
Score = 42.3 bits (86), Expect(4) = 2e-27
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = -3 / -2
Query: 839 TC*SWQAHSQRT*SPPECPSVRMTP*P 759
TC*S QAHSQ+T*S CPS++M P P
Sbjct: 1141 TC*SLQAHSQKT*SQLVCPSMKMIPVP 1061
Score = 36.8 bits (74), Expect(4) = 2e-27
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -1 / -1
Query: 748 IVSCHARHAVVSDDQIHAHLL 686
I+ CHARHAVVSD Q+ +LL
Sbjct: 929 IIPCHARHAVVSDYQVDINLL 867
Score = 65.7 bits (137), Expect(5) = 1e-26
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = +2 / +3
Query: 686 QEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDI 790
QE+ VNLIITDYCMPGMTGYDLL+RVK S L+ I
Sbjct: 867 QEIDVNLIITDYCMPGMTGYDLLKRVKVSFCLQRI 971
Score = 50.1 bits (103), Expect(5) = 1e-26
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +2 / +2
Query: 116 NHGGDLLWRFGSVIWSDPAF 175
NHGGDLLWRFG VIWSD AF
Sbjct: 68 NHGGDLLWRFGCVIWSDLAF 127
Score = 40.0 bits (81), Expect(5) = 1e-26
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / +3
Query: 835 QVLGGWRGGVLPQAREARRHEEAQV 909
QVLG W GVLP+ +AR HEEAQV
Sbjct: 2598 QVLGRWCRGVLPETCQAR*HEEAQV 2672
Score = 29.9 bits (59), Expect(5) = 1e-26
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +1 / +1
Query: 526 EAHRDAAQDLLLP 564
EAHRDAAQ+L+LP
Sbjct: 475 EAHRDAAQELVLP 513
Score = 24.0 bits (46), Expect(5) = 1e-26
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3 / +3
Query: 801 SCPLRMCLPGSAGAWRM 851
SCPL + PG+ W M
Sbjct: 1161 SCPLILAYPGNYCCWSM 1211
Score = 49.2 bits (101), Expect(3) = 4e-13
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +1 / +3
Query: 760 GQGVILTEGHSGGDHVL*ECACQDQQV 840
G G+I EGH+ DHV *ECAC+DQQV
Sbjct: 1062 GTGIIFIEGHTSCDHVF*ECACKDQQV 1142
Score = 47.3 bits (97), Expect(3) = 4e-13
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +3 / +3
Query: 114 EIMEAICCGDSGP*SGRILLS 176
EIMEAICCGDSG *SGRILLS
Sbjct: 66 EIMEAICCGDSGV*SGRILLS 128
Score = 26.3 bits (51), Expect(3) = 4e-13
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +3 / +1
Query: 711 SLTTACRA*QDTIC*GGSR 767
SLTTAC A*Q IC G R
Sbjct: 892 SLTTACLA*QGMICSRG*R 948
Score = 46.0 bits (94), Expect(2) = 5e-07
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = -1 / -2
Query: 178 RESRIRPDHGPESPQQIASMI 116
+ES+IRPDH PESPQQIASMI
Sbjct: 130 QESKIRPDHTPESPQQIASMI 68
Score = 34.5 bits (69), Expect(2) = 5e-07
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -1 / -3
Query: 850 ILQAPADPGRHILRGHDHH 794
I +P DP RHILR HDH+
Sbjct: 1152 IFSSPVDPCRHILRRHDHN 1096
Score = 42.8 bits (87), Expect = 0.007
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +3 / +2
Query: 759 GSRGHPH*RTFRW*SCPLRMCLPGSAG 839
G R H H*RT++ *SC LRMCL GS G
Sbjct: 1061 GYRDHLH*RTYQL*SCLLRMCLQGSTG 1141
>LOC_Os12g04500:12012.t00339:unspliced-genomic OsRR10 - Rice type-A response regulator, expressed|
Length = 1743
Score = 65.2 bits (136), Expect(5) = 1e-41
Identities = 24/27 (88%), Positives = 27/27 (100%)
Frame = +2 / +1
Query: 686 QEVGVNLIITDYCMPGMTGYDLLRRVK 766
QEVGVNLIITDYCMPGMTGYDLL+++K
Sbjct: 526 QEVGVNLIITDYCMPGMTGYDLLKKIK 606
Score = 57.0 bits (118), Expect(5) = 1e-41
Identities = 20/29 (68%), Positives = 27/29 (93%)
Frame = +2 / +1
Query: 836 RCLEDGAEEFFLKPVKLADMKKLKSHLVR 922
RCLE+GA+EFFLKPV+L+DM KLK H+++
Sbjct: 1480 RCLEEGADEFFLKPVRLSDMSKLKPHILK 1566
Score = 54.2 bits (112), Expect(5) = 1e-41
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +2 / +3
Query: 470 VDAESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTT 574
V E+ FHVLAVDDS+ DRKLIE LLKTSS+Q T
Sbjct: 144 VAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQGIT 248
Score = 43.2 bits (88), Expect(5) = 1e-41
Identities = 17/23 (73%), Positives = 22/23 (95%)
Frame = +2 / +2
Query: 770 SSSLKDIPVVIMSSENVPARISR 838
SS L+DIPVVIMSS+N+P+RI+R
Sbjct: 725 SSYLRDIPVVIMSSDNIPSRINR 793
Score = 38.2 bits (77), Expect(5) = 1e-41
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +2 / +3
Query: 566 VTTVDSGSKALEVLGLRDED 625
VTTVDSGSKALE LGL D +
Sbjct: 339 VTTVDSGSKALEFLGLHDHE 398
Score = 54.7 bits (113), Expect(5) = 9e-31
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = -2 / -3
Query: 582 ESTVVTW*EEVLSSISMSFRSMTLSSTARTWNRDSASTTV 463
++ V+ W EEVLSS+SMSF S LSSTARTWN S +T +
Sbjct: 256 KNLVIPWKEEVLSSLSMSFLSGRLSSTARTWNGASIATAM 137
Score = 52.4 bits (108), Expect(5) = 9e-31
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = -2 / -2
Query: 765 LTLLSRSYPVMPGMQ*SVMIKFTPTS 688
L L RSYPVMPGMQ*SVMI+FTPTS
Sbjct: 605 LIFLRRSYPVMPGMQ*SVMIRFTPTS 528
Score = 42.8 bits (87), Expect(5) = 9e-31
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -2 / -2
Query: 903 SFFMSASFTGLRKNSSAPSSKHLL 832
S MS S TGLRKNSSAPSS+HL+
Sbjct: 1547 SLLMSESRTGLRKNSSAPSSRHLI 1476
Score = 41.4 bits (84), Expect(5) = 9e-31
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -2 / -1
Query: 846 SKHLLILAGTFSEDMITTGMSFSEDD 769
S HLLIL G S+DMITTGMS DD
Sbjct: 801 SVHLLILEGMLSDDMITTGMSLK*DD 724
Score = 29.0 bits (57), Expect(5) = 9e-31
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -2 / -3
Query: 612 NPSTSSALLPESTVVT 565
+P S ALLPESTVVT
Sbjct: 385 SPKNSRALLPESTVVT 338
Score = 47.3 bits (97), Expect(2) = 2e-07
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -1 / -1
Query: 748 IVSCHARHAVVSDDQIHAHLLMV 680
I+SCHARHAVV DDQ+H++LL +
Sbjct: 588 IISCHARHAVVCDDQVHSNLLFI 520
Score = 33.1 bits (66), Expect(2) = 2e-07
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1 / -2
Query: 538 LDELPVDDAVVHRQDVEPGLGVH 470
LDELPV A++H QD+E L H
Sbjct: 212 LDELPVRKAIIHSQDMERSLYSH 144
Score = 38.2 bits (77), Expect(3) = 0.001
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +1 / +3
Query: 706 DHH*LLHAGHDRIRSAEEGQG 768
DHH LLHA HDRI S++E QG
Sbjct: 546 DHHRLLHAWHDRI*SSQEDQG 608
Score = 25.8 bits (50), Expect(3) = 0.001
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1 / +2
Query: 526 EAHRDAAQDLLLP 564
EAHR+A QDL P
Sbjct: 200 EAHREATQDLFFP 238
Score = 23.5 bits (45), Expect(3) = 0.001
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1 / +1
Query: 766 GVILTEGHSGGDHVL 810
G++L +GH DHV+
Sbjct: 721 GIVLFKGHPSCDHVI 765
>LOC_Os11g04720:12011.t00365:unspliced-genomic OsRR9 - Rice type-A response regulator, expressed|
Length = 2035
Score = 62.5 bits (130), Expect(5) = 1e-40
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = +2 / +1
Query: 686 QEVGVNLIITDYCMPGMTGYDLLRRVK 766
QEV VNLIITDYCMPGMTGYDLL+++K
Sbjct: 544 QEVAVNLIITDYCMPGMTGYDLLKKIK 624
Score = 57.0 bits (118), Expect(5) = 1e-40
Identities = 20/29 (68%), Positives = 27/29 (93%)
Frame = +2 / +1
Query: 836 RCLEDGAEEFFLKPVKLADMKKLKSHLVR 922
RCLE+GA+EFFLKPV+L+DM KLK H+++
Sbjct: 1498 RCLEEGADEFFLKPVRLSDMSKLKPHILK 1584
Score = 54.2 bits (112), Expect(5) = 1e-40
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +2 / +2
Query: 470 VDAESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTT 574
V E+ FHVLAVDDS+ DRKLIE LLKTSS+Q T
Sbjct: 140 VAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQGIT 244
Score = 43.2 bits (88), Expect(5) = 1e-40
Identities = 17/23 (73%), Positives = 22/23 (95%)
Frame = +2 / +2
Query: 770 SSSLKDIPVVIMSSENVPARISR 838
SS L+DIPVVIMSS+N+P+RI+R
Sbjct: 743 SSYLRDIPVVIMSSDNIPSRINR 811
Score = 38.2 bits (77), Expect(5) = 1e-40
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +2 / +2
Query: 566 VTTVDSGSKALEVLGLRDED 625
VTTVDSGSKALE LGL D +
Sbjct: 335 VTTVDSGSKALEFLGLHDHE 394
Score = 54.7 bits (113), Expect(5) = 1e-29
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = -2 / -2
Query: 582 ESTVVTW*EEVLSSISMSFRSMTLSSTARTWNRDSASTTV 463
++ V+ W EEVLSS+SMSF S LSSTARTWN S +T +
Sbjct: 252 KNLVIPWKEEVLSSLSMSFLSGRLSSTARTWNGASIATAM 133
Score = 48.7 bits (100), Expect(5) = 1e-29
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = -2 / -3
Query: 765 LTLLSRSYPVMPGMQ*SVMIKFTPTS 688
L L RSYPVMPGMQ*SVMI+FT TS
Sbjct: 623 LIFLRRSYPVMPGMQ*SVMIRFTATS 546
Score = 42.8 bits (87), Expect(5) = 1e-29
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -2 / -3
Query: 903 SFFMSASFTGLRKNSSAPSSKHLL 832
S MS S TGLRKNSSAPSS+HL+
Sbjct: 1565 SLLMSESRTGLRKNSSAPSSRHLI 1494
Score = 41.8 bits (85), Expect(5) = 1e-29
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -2 / -2
Query: 846 SKHLLILAGTFSEDMITTGMSFSEDD 769
S HLLIL G S+DMITTGMS DD
Sbjct: 819 SAHLLILEGMLSDDMITTGMSLK*DD 742
Score = 29.0 bits (57), Expect(5) = 1e-29
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -2 / -2
Query: 612 NPSTSSALLPESTVVT 565
+P S ALLPESTVVT
Sbjct: 381 SPKNSRALLPESTVVT 334
Score = 47.8 bits (98), Expect(2) = 2e-07
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -1 / -2
Query: 748 IVSCHARHAVVSDDQIHAHLLMV 680
I+SCHARHAVV DDQ+H +LL++
Sbjct: 606 IISCHARHAVVCDDQVHCNLLLI 538
Score = 33.1 bits (66), Expect(2) = 2e-07
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1 / -1
Query: 538 LDELPVDDAVVHRQDVEPGLGVH 470
LDELPV A++H QD+E L H
Sbjct: 208 LDELPVRKAIIHSQDMERSLYSH 140
Score = 38.2 bits (77), Expect(3) = 0.001
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +1 / +3
Query: 706 DHH*LLHAGHDRIRSAEEGQG 768
DHH LLHA HDRI S++E QG
Sbjct: 564 DHHRLLHAWHDRI*SSQEDQG 626
Score = 25.8 bits (50), Expect(3) = 0.001
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1 / +1
Query: 526 EAHRDAAQDLLLP 564
EAHR+A QDL P
Sbjct: 196 EAHREATQDLFFP 234
Score = 23.5 bits (45), Expect(3) = 0.001
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1 / +1
Query: 766 GVILTEGHSGGDHVL 810
G++L +GH DHV+
Sbjct: 739 GIVLFKGHPSCDHVI 783
>LOC_Os04g57720:12004.t05238:unspliced-genomic OsRR6 - Rice type-A response regulator, expressed|
Length = 1380
Score = 81.7 bits (172), Expect(3) = 2e-37
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +2 / +3
Query: 770 SSSLKDIPVVIMSSENVPARISRCLEDGAEEFFLKPVKLADMKKLKSHL 916
SS LK+IPVVIMSSENVP RISRCLE+GAE+F LKPV+ +D+ +L S +
Sbjct: 567 SSQLKEIPVVIMSSENVPNRISRCLEEGAEDFLLKPVRPSDVSRLCSRI 713
Score = 63.8 bits (133), Expect(3) = 2e-37
Identities = 26/47 (55%), Positives = 38/47 (80%)
Frame = +2 / +1
Query: 473 DAESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGL 613
+A+S HVLAVDDS +DR +I +L++S Y+VTTV+S ++ALE+L L
Sbjct: 235 EAQSEMHVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCL 375
Score = 50.1 bits (103), Expect(3) = 2e-37
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +2 / +1
Query: 698 VNLIITDYCMPGMTGYDLLRRVK 766
VN+IITDY MPGMTGY+LL+RVK
Sbjct: 391 VNMIITDYWMPGMTGYELLKRVK 459
Score = 60.6 bits (126), Expect(3) = 4e-18
Identities = 26/37 (70%), Positives = 30/37 (81%)
Frame = -2 / -3
Query: 879 TGLRKNSSAPSSKHLLILAGTFSEDMITTGMSFSEDD 769
TGL + SSAPSS+H LI GTFS+DMITTG+S S DD
Sbjct: 676 TGLSRKSSAPSSRHRLIRFGTFSDDMITTGISLS*DD 566
Score = 35.9 bits (72), Expect(3) = 4e-18
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -2 / -2
Query: 603 TSSALLPESTVVTW*EEVLSSISMSFRSMTLSSTART 493
+SSAL+ +STVVT E+ ++M+ RS LSSTA T
Sbjct: 365 SSSALVADSTVVTLYLELRRILAMTARSTELSSTAST 255
Score = 33.1 bits (66), Expect(3) = 4e-18
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -2 / -2
Query: 765 LTLLSRSYPVMPGMQ*SVMIKFT 697
LT L S PVMPG+Q*SVMI T
Sbjct: 458 LTRLRSS*PVMPGIQ*SVMIMLT 390
Score = 42.8 bits (87), Expect(3) = 1e-08
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = +1 / +2
Query: 766 GVILTEGHSGGDHVL*ECACQDQQVLGGWRGGVLPQAREARRHEEA 903
G++ +G GGDHV+ E A DQ V GG R G+ QAR R A
Sbjct: 563 GIVSAQGDPGGDHVVGERAEPDQPVPGGGRRGLPAQARTPLRRVAA 700
Score = 31.8 bits (63), Expect(3) = 1e-08
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1 / +3
Query: 706 DHH*LLHAGHDRIRSAEEGQG 768
DHH LL A HDR+R+ + QG
Sbjct: 399 DHHRLLDARHDRLRAPQARQG 461
Score = 22.1 bits (42), Expect(3) = 1e-08
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1 / +3
Query: 532 HRDAAQDLLLPSDHGGLREQ 591
HR +L + DHGG+ ++
Sbjct: 294 HRQDPPELQVQGDHGGVGDE 353
Score = 48.7 bits (100), Expect(2) = 9e-05
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = -1 / -2
Query: 853 AILQAPADPGRHILRGHDHHRNV 785
A+LQAPADP RH+LR HDHHR++
Sbjct: 650 ALLQAPADPVRHVLRRHDHHRDL 582
Score = 22.6 bits (43), Expect(2) = 9e-05
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1 / -3
Query: 481 LGVHHRHGASR 449
LGV H HG+SR
Sbjct: 520 LGVPHSHGSSR 488
Score = 40.5 bits (82), Expect = 0.033
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = +3 / +1
Query: 747 IC*GGSRGHPH*RTFRW*SCPLRMCLPGSAGAWRMA 854
+C R R RW*SC R C GSAGAWR A
Sbjct: 544 VCGSCCRNRLSSRRSRW*SCRRRTCRTGSAGAWRRA 651
>LOC_Os02g58350:12002.t05406:unspliced-genomic OsRR3 - Rice type-A response regulator, expressed|
Length = 1144
Score = 73.9 bits (155), Expect(4) = 9e-31
Identities = 28/50 (56%), Positives = 41/50 (82%)
Frame = +2 / +2
Query: 770 SSSLKDIPVVIMSSENVPARISRCLEDGAEEFFLKPVKLADMKKLKSHLV 919
S+ LK+IPVV+MSSEN P RI RCLE+GAE+F +KPV+ +D+ +L + ++
Sbjct: 680 SAELKEIPVVLMSSENSPTRIRRCLEEGAEDFLIKPVRPSDVSRLCNRVI 829
Score = 52.4 bits (108), Expect(4) = 9e-31
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +2 / +3
Query: 686 QEVGVNLIITDYCMPGMTGYDLLRRVKGSSS 778
Q+ V++IITDYCMP MTG+DLL+RVK S S
Sbjct: 507 QDRNVHMIITDYCMPEMTGFDLLKRVKVSIS 599
Score = 41.8 bits (85), Expect(4) = 9e-31
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2 / +3
Query: 491 HVLAVDDSVIDRKLIEMLLKTSSYQVT 571
HVLAVDDS++DR +I LL++S Y+ T
Sbjct: 78 HVLAVDDSIVDRTVISRLLRSSKYRGT 158
Score = 31.3 bits (62), Expect(4) = 9e-31
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2 / +2
Query: 560 YQVTTVDSGSKALEVLGL 613
+ VTTVDSG +ALEVL L
Sbjct: 365 HAVTTVDSGKRALEVLSL 418
Score = 55.6 bits (115), Expect(4) = 2e-15
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = -2 / -2
Query: 879 TGLRKNSSAPSSKHLLILAGTFSEDMITTGMSFSEDD 769
TGL K SSAPSS+H IL G FS+D+ TTG+SFS D
Sbjct: 789 TGLIKKSSAPSSRHRRILVGEFSDDISTTGISFSSAD 679
Score = 34.5 bits (69), Expect(4) = 2e-15
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -2 / -1
Query: 780 SEDDPLTLLSRSYPVMPGMQ*SVMI 706
SE LTLL RS PV+ GMQ*SVMI
Sbjct: 601 SEMLTLTLLRRSNPVISGMQ*SVMI 527
Score = 29.9 bits (59), Expect(4) = 2e-15
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -2 / -1
Query: 555 EVLSSISMSFRSMTLSSTARTWNRDSASTTVMARPGRKKSQ 433
E+ S+ M+ RS LSSTART S + V R ++S+
Sbjct: 142 ELRRSLEMTVRSTMLSSTARTCGSGSGTVFVDMRQRMEQSR 20
Score = 26.3 bits (51), Expect(4) = 2e-15
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -2 / -2
Query: 603 TSSALLPESTVVT 565
TSSALLP STVVT
Sbjct: 408 TSSALLPLSTVVT 370
Score = 45.1 bits (92), Expect(2) = 3e-06
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1 / +2
Query: 703 FDHH*LLHAGHDRIRSAEEGQG 768
+DHH LLHAG DR+RS +EGQG
Sbjct: 524 YDHHGLLHAGDDRVRSPQEGQG 589
Score = 27.2 bits (53), Expect(2) = 3e-06
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3 / +3
Query: 765 RGHPH*RTFRW*SCPLRMCLPGSAGAWR 848
R *R FRW C R+ S GAWR
Sbjct: 675 RSRRS*RRFRWC*CRRRIRRRESGGAWR 758
Score = 35.9 bits (72), Expect(3) = 6e-06
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1 / -1
Query: 850 ILQAPADPGRHILRGHDHHRNV 785
+LQAP D R ILR H HHRN+
Sbjct: 760 LLQAPPDSRRRILRRH*HHRNL 695
Score = 32.2 bits (64), Expect(3) = 6e-06
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1 / -3
Query: 748 IVSCHARHAVVSDDQIHAHLL 686
I CH RHAV+ DD +H +L
Sbjct: 569 IEPCHLRHAVIRDDHMHIPIL 507
Score = 26.3 bits (51), Expect(3) = 6e-06
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1 / -3
Query: 535 DELPVDDAVVHRQDV 491
D+ VDDAVVH +DV
Sbjct: 122 DDSTVDDAVVHGEDV 78
Score = 28.6 bits (56), Expect(2) = 0.20
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -3 / -3
Query: 848 PPSTC*SWQAHSQRT*SPPECPSVRMTP 765
PP T A+S T +PPE PS TP
Sbjct: 758 PPGTAGFSSANSPTTLAPPESPSAPPTP 675
Score = 26.7 bits (52), Expect(2) = 0.20
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3 / -2
Query: 767 P*PSSADRILSCPAC 723
P*PS DR LS PAC
Sbjct: 588 P*PS*GDRTLSSPAC 544
>LOC_Os02g42060:12002.t03793:unspliced-genomic two-component response regulator ARR3, putative, expressed|
Length = 982
Score = 46.4 bits (95), Expect(5) = 6e-28
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = +2 / +2
Query: 686 QEVGVNLIITDYCMPGMTGYDLLRRVK 766
QE V++IITDY MP MTGY+LL++VK
Sbjct: 485 QEPNVSMIITDYWMPEMTGYELLKKVK 565
Score = 45.1 bits (92), Expect(5) = 6e-28
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +2 / +1
Query: 770 SSSLKDIPVVIMSSENVPARISR 838
SS LK IPVVIMSSENVP RISR
Sbjct: 673 SSKLKKIPVVIMSSENVPTRISR 741
Score = 41.4 bits (84), Expect(5) = 6e-28
Identities = 14/30 (46%), Positives = 25/30 (83%)
Frame = +2 / +2
Query: 830 ISRCLEDGAEEFFLKPVKLADMKKLKSHLV 919
++RCLE+GAE+F +KPV+ +D+ +L S ++
Sbjct: 857 LTRCLEEGAEDFLVKPVRPSDVSRLFSRVL 946
Score = 36.3 bits (73), Expect(5) = 6e-28
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +2 / +2
Query: 491 HVLAVDDSVIDRKLIEMLLKTSSYQVTTV 577
HVLAVDDS +DR +I +L++S ++ T V
Sbjct: 161 HVLAVDDSSVDRAVIAGILRSSRFRGTCV 247
Score = 28.1 bits (55), Expect(5) = 6e-28
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2 / +3
Query: 566 VTTVDSGSKALEVLG 610
VT VDSG +ALE+LG
Sbjct: 330 VTAVDSGKRALELLG 374
Score = 47.8 bits (98), Expect(3) = 2e-11
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = -2 / -3
Query: 843 KHLLILAGTFSEDMITTGMSFSEDD 769
K+LLIL GTFSEDMITTG+ FS DD
Sbjct: 746 KYLLILVGTFSEDMITTGIFFSLDD 672
Score = 29.9 bits (59), Expect(3) = 2e-11
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -2 / -2
Query: 765 LTLLSRSYPVMPGMQ*SVMIKFT 697
LT SYPV+ G+Q*SV+I T
Sbjct: 564 LTFFRSSYPVISGIQ*SVIIMLT 496
Score = 29.0 bits (57), Expect(3) = 2e-11
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2 / -2
Query: 879 TGLRKNSSAPSSKHLL 832
TG K SSAPSS+HL+
Sbjct: 906 TGFTKKSSAPSSRHLV 859
Score = 38.6 bits (78), Expect(2) = 7e-06
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = +3 / +2
Query: 765 RGHPH*RTFRW*SCPLRMCLPGSAG 839
R HP *R W*SCP RMC SAG
Sbjct: 668 RSHPS*RRSPW*SCPRRMCQQESAG 742
Score = 32.2 bits (64), Expect(2) = 7e-06
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1 / +1
Query: 706 DHH*LLHAGHDRIRSAEEGQGV 771
D+H LL AG D IR+ EE QG+
Sbjct: 505 DNHGLLDAGDDGIRAPEESQGI 570
Score = 34.5 bits (69), Expect(2) = 0.77
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1 / -2
Query: 847 LQAPADPGRHILRGHDHH 794
++ PAD HILRGHDHH
Sbjct: 750 IKIPADSCWHILRGHDHH 697
Score = 22.6 bits (43), Expect(2) = 0.77
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -2
Query: 537 SMSFRSMTLSSTART 493
+M+ RS LSSTART
Sbjct: 207 AMTARSTELSSTART 163
Score = 33.1 bits (66), Expect = 5.3
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1 / +3
Query: 766 GVILTEGHSGGDHVL*ECACQDQQV 840
GVI E GDHVL ECA ++QQV
Sbjct: 669 GVIQAEEDPRGDHVLGECANKNQQV 743
>LOC_Os07g26720:12007.t02368:unspliced-genomic OsRR7 - Rice type-A response regulator, expressed|
Length = 1292
Score = 48.3 bits (99), Expect(5) = 2e-25
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +2 / +3
Query: 683 HQEVGVNLIITDYCMPGMTGYDLLRRVK 766
+QE V++IITDY MP MTGYDLL+++K
Sbjct: 633 NQEPNVSMIITDYWMPEMTGYDLLKKIK 716
Score = 45.5 bits (93), Expect(5) = 2e-25
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +2 / +2
Query: 770 SSSLKDIPVVIMSSENVPARISR 838
SS LK IPVVIMSSENVP RISR
Sbjct: 1022 SSELKQIPVVIMSSENVPTRISR 1090
Score = 43.7 bits (89), Expect(5) = 2e-25
Identities = 15/29 (51%), Positives = 24/29 (82%)
Frame = +2 / +3
Query: 836 RCLEDGAEEFFLKPVKLADMKKLKSHLVR 922
RCLE+GAE+F LKPV+ AD+ ++ S +++
Sbjct: 1203 RCLEEGAEDFLLKPVRPADISRITSRMLQ 1289
Score = 33.6 bits (67), Expect(5) = 2e-25
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2 / +1
Query: 491 HVLAVDDSVIDRKLIEMLLKTSSYQ 565
+V+AVDDS +DR +I LL+ S Y+
Sbjct: 274 YVMAVDDSSVDRAVITALLRRSKYR 348
Score = 29.0 bits (57), Expect(5) = 2e-25
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2 / +3
Query: 566 VTTVDSGSKALEVLG 610
VT VDSG +ALE+LG
Sbjct: 504 VTAVDSGKRALEILG 548
Score = 48.7 bits (100), Expect(3) = 5e-13
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = -2 / -3
Query: 840 HLLILAGTFSEDMITTGMSFSEDDPLTLLSRSY 742
HLLIL GTFS+D+ITTG+ FS DD +S Y
Sbjct: 1092 HLLILVGTFSDDIITTGICFSSDDSCLQISFCY 994
Score = 35.9 bits (72), Expect(3) = 5e-13
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -2 / -2
Query: 765 LTLLSRSYPVMPGMQ*SVMIKFT 697
L LSRSYPV+ G+Q*SVMI T
Sbjct: 715 LIFLSRSYPVISGIQ*SVMIMLT 647
Score = 35.0 bits (70), Expect(3) = 5e-13
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -2 / -2
Query: 894 MSASFTGLRKNSSAPSSKHL 835
MSA TGL + SSAPSSKHL
Sbjct: 1261 MSAGRTGLSRKSSAPSSKHL 1202
Score = 38.6 bits (78), Expect(3) = 3e-04
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1 / +2
Query: 706 DHH*LLHAGHDRIRSAEEGQGVILTEGHS 792
DHH LL AG DR+R A+E QG LT+ +
Sbjct: 656 DHHGLLDAGDDRVRPAQEDQGN*LTQNRT 742
Score = 28.1 bits (55), Expect(3) = 3e-04
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1 / +1
Query: 766 GVILTEGHSGGDHVL*ECACQDQQV 840
G++ E GGD+V+ E A +DQQV
Sbjct: 1018 GIV*AEADPGGDNVVRERAHKDQQV 1092
Score = 22.1 bits (42), Expect(3) = 3e-04
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1 / +2
Query: 835 QVLGGWRGGVLPQAREARRH 894
Q+LG RGG+ QAR H
Sbjct: 1202 QMLGRRRGGLPAQARPTGGH 1261
>LOC_Os04g44280:12004.t03968:unspliced-genomic OsRR5 - Rice type-A response regulator, expressed|
Length = 1220
Score = 46.4 bits (95), Expect(4) = 3e-19
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = +2 / +3
Query: 686 QEVGVNLIITDYCMPGMTGYDLLRRVK 766
QE V++IITDY MP MTGY+LL++VK
Sbjct: 420 QEPNVSMIITDYWMPEMTGYELLKKVK 500
Score = 40.9 bits (83), Expect(4) = 3e-19
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +2 / +3
Query: 770 SSSLKDIPVVIMSSENVPARISR 838
SS LK+IPVVIMSSENV RI+R
Sbjct: 615 SSRLKEIPVVIMSSENVSTRINR 683
Score = 35.0 bits (70), Expect(4) = 3e-19
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +2 / +1
Query: 491 HVLAVDDSVIDRKLIEMLLKTSSYQ 565
HVLAVDDS +DR +I +L++S ++
Sbjct: 121 HVLAVDDSSVDRAVISGILRSSQFR 195
Score = 28.1 bits (55), Expect(4) = 3e-19
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2 / +3
Query: 566 VTTVDSGSKALEVLG 610
VT VDSG +ALE+LG
Sbjct: 273 VTAVDSGKRALELLG 317
Score = 44.6 bits (91), Expect(2) = 3e-07
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +2 / +2
Query: 797 VIMSSENVPARISRCLEDGAEEFFLKPVKLADMKKLKSHLVR 922
+ SS +V +RCLE+GAE+F LKPV+ +D+ +L S ++R
Sbjct: 731 IYSSS*HVFG*FARCLEEGAEDFLLKPVQPSDVSRLCSRVLR 856
Score = 35.0 bits (70), Expect(2) = 3e-07
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1 / +2
Query: 706 DHH*LLHAGHDRIRSAEEGQG 768
D+H*LL AG DR+ + EEGQG
Sbjct: 440 DYH*LLDAGDDRV*TPEEGQG 502
Score = 44.1 bits (90), Expect(2) = 8e-07
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2 / -2
Query: 840 HLLILAGTFSEDMITTGMSFSEDD 769
+LLIL TFSEDMITTG+SFS DD
Sbjct: 685 NLLILVETFSEDMITTGISFSLDD 614
Score = 29.9 bits (59), Expect(2) = 8e-07
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -2 / -2
Query: 765 LTLLSRSYPVMPGMQ*SVMIKFT 697
LT SYPV+ G+Q*SV+I T
Sbjct: 499 LTFFRSSYPVISGIQ*SVIIMLT 431
Score = 37.7 bits (76), Expect(2) = 0.063
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -1 / -1
Query: 838 PADPGRHILRGHDHHRNV 785
P DP R +LRGHDHHR++
Sbjct: 683 PVDPCRDVLRGHDHHRDL 630
Score = 23.5 bits (45), Expect(2) = 0.063
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2 / -1
Query: 534 MSFRSMTLSSTARTWNRDSAST 469
M+ RS LSSTART ST
Sbjct: 164 MTARSTELSSTARTCGAPPLST 99
>LOC_Os04g36070:12004.t03277:unspliced-genomic OsRR1 - Rice type-A response regulator, expressed|
Length = 3849
Score = 50.1 bits (103), Expect(5) = 2e-18
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = +2 / +1
Query: 680 HHQEVGVNLIITDYCMPGMTGYDLLRRVK 766
H QE +++++TDYCMP MTGY+LL+ +K
Sbjct: 1564 HVQEQAIDMVLTDYCMPEMTGYELLKAIK 1650
Score = 38.6 bits (78), Expect(5) = 2e-18
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2 / +3
Query: 773 SSLKDIPVVIMSSENVPARISR 838
S LK IPV++MSSEN P RISR
Sbjct: 1812 SPLKPIPVIVMSSENEPQRISR 1877
Score = 33.1 bits (66), Expect(5) = 2e-18
Identities = 10/25 (40%), Positives = 20/25 (80%)
Frame = +2 / +2
Query: 836 RCLEDGAEEFFLKPVKLADMKKLKS 910
RC+ GAE+F +KP++ D+++L++
Sbjct: 2594 RCMNAGAEDFIVKPLQSKDVQRLRN 2668
Score = 31.8 bits (63), Expect(5) = 2e-18
Identities = 11/22 (50%), Positives = 19/22 (86%)
Frame = +2 / +2
Query: 494 VLAVDDSVIDRKLIEMLLKTSS 559
VL VDDS +DR+++++LL +S+
Sbjct: 392 VLLVDDSPVDRRVVQLLLSSSA 457
Score = 28.1 bits (55), Expect(5) = 2e-18
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 566 VTTVDSGSKALEVLGLRDE 622
V VDS KA+E LGL++E
Sbjct: 970 VIAVDSAKKAMEFLGLKEE 1026
Score = 34.1 bits (68), Expect = 2.8
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -2 / -3
Query: 849 SSKHLLILAGTFSEDMITTGMSF 781
S HLLIL G+FS+DM TG+ F
Sbjct: 1888 SLPHLLILWGSFSDDMTITGIGF 1820
>LOC_Os02g35180:12002.t03156:unspliced-genomic OsRR2 - Rice type-A response regulator, expressed|
Length = 2751
Score = 48.3 bits (99), Expect(4) = 2e-16
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = +2 / +3
Query: 686 QEVGVNLIITDYCMPGMTGYDLLRRVK 766
Q+ +++++TDYCMP MTGYDLL+ +K
Sbjct: 873 QDQAIDIVLTDYCMPEMTGYDLLKAIK 953
Score = 39.6 bits (80), Expect(4) = 2e-16
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +2 / +3
Query: 833 SRCLEDGAEEFFLKPVKLADMKKLK 907
SRCL GAE+F LKP+K+ D+++L+
Sbjct: 1365 SRCLTAGAEDFILKPLKMNDVQRLR 1439
Score = 34.1 bits (68), Expect(4) = 2e-16
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2 / +3
Query: 788 IPVVIMSSENVPARISR 838
IPVV+MSSEN P RISR
Sbjct: 1083 IPVVVMSSENEPQRISR 1133
Score = 31.8 bits (63), Expect(4) = 2e-16
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +2 / +1
Query: 494 VLAVDDSVIDRKLIEMLLK 550
VL VDDS +DR+++E+LL+
Sbjct: 187 VLVVDDSPVDRRVVELLLR 243
Score = 37.3 bits (75), Expect(3) = 6e-05
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = -2 / -3
Query: 840 HLLILAGTFSEDMITTGMSFSE 775
HLLIL G+FS+DM TTG+ F +
Sbjct: 1135 HLLILWGSFSDDMTTTGIGFGD 1070
Score = 29.0 bits (57), Expect(3) = 6e-05
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2 / -3
Query: 765 LTLLSRSYPVMPGMQ*SV 712
L L RSYPV+ GMQ*SV
Sbjct: 952 LMALRRSYPVISGMQ*SV 899
Score = 27.2 bits (53), Expect(3) = 6e-05
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2 / -3
Query: 876 GLRKNSSAPSSKHLL 832
GLR SSAP+ KHLL
Sbjct: 1408 GLRMKSSAPAVKHLL 1364
Score = 30.9 bits (61), Expect(2) = 0.023
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1 / +2
Query: 718 LLHAGHDRIRSAEEGQG 768
LLHAG DRIRS++ QG
Sbjct: 905 LLHAGDDRIRSSQSHQG 955
Score = 27.6 bits (54), Expect(2) = 0.023
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1 / +2
Query: 766 GVILTEGHSGGDHVL*ECACQDQQV 840
GV + E GG HV+ E A +DQQV
Sbjct: 1061 GVGVAESDPGGGHVVGE*APEDQQV 1135
Score = 31.8 bits (63), Expect(2) = 0.24
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1 / -2
Query: 841 APADPGRHILRGHDHHRN 788
+PADP ILR HDHHR+
Sbjct: 1136 SPADPLGLILRRHDHHRD 1083
Score = 28.6 bits (56), Expect(2) = 0.24
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1 / -2
Query: 748 IVSCHARHAVVSDDQIHAHLL 686
IVSCH RHAVV + +L
Sbjct: 935 IVSCHLRHAVVGQHDVDRLIL 873
Score = 28.6 bits (56), Expect(2) = 3.7
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -3 / -1
Query: 839 TC*SWQAHSQRT*SPPECPSVRMTP 765
TC*S AHS T* PP S TP
Sbjct: 1134 TC*SSGAHSPTT*PPPGSDSATPTP 1060
Score = 22.1 bits (42), Expect(2) = 3.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / -1
Query: 749 DRILSCPAC 723
DRILS PAC
Sbjct: 936 DRILSSPAC 910
>LOC_Os08g26990:12008.t02463:unspliced-genomic two-component response regulator ARR3, putative, expressed|
Length = 836
Score = 50.1 bits (103), Expect(4) = 1e-15
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +2 / +3
Query: 686 QEVGVNLIITDYCMPGMTGYDLLRRVK 766
QE VN+I++DYCMP MTGYDLL VK
Sbjct: 381 QEHDVNMIVSDYCMPEMTGYDLLMEVK 461
Score = 37.3 bits (75), Expect(4) = 1e-15
Identities = 11/27 (40%), Positives = 22/27 (81%)
Frame = +2 / +3
Query: 836 RCLEDGAEEFFLKPVKLADMKKLKSHL 916
RC + GA+++ LKPVK+AD+ ++ +++
Sbjct: 753 RCFDGGAKDYILKPVKIADVPRILNYI 833
Score = 29.0 bits (57), Expect(4) = 1e-15
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2 / +3
Query: 476 AESRFHVLAVDDSVIDRKLIEMLL 547
A S HVL VDD+ +DR +I M L
Sbjct: 36 AMSSPHVLVVDDTHVDRHVISMAL 107
Score = 29.0 bits (57), Expect(4) = 1e-15
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2 / +3
Query: 770 SSSLKDIPVVIMSSENVPARISR 838
S L +PV+I SS+N+P RI +
Sbjct: 579 SPRLVHLPVIIASSDNIPERIRK 647
>LOC_Os08g28900:12008.t02646:unspliced-genomic OsRR8 - Rice type-A response regulator, expressed|
Length = 782
Score = 46.0 bits (94), Expect(4) = 1e-14
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +2 / +3
Query: 686 QEVGVNLIITDYCMPGMTGYDLLRRVK 766
QE V++I++DYCMP MTGY+LL VK
Sbjct: 342 QEHDVDMIVSDYCMPDMTGYNLLMEVK 422
Score = 37.3 bits (75), Expect(4) = 1e-14
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = +2 / +3
Query: 836 RCLEDGAEEFFLKPVKLADMKKLKSHL 916
RCL+ GA+++ LKPVK+ D+ ++ ++
Sbjct: 699 RCLDGGAKDYILKPVKIVDVPRIMKYI 779
Score = 30.4 bits (60), Expect(4) = 1e-14
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2 / +2
Query: 770 SSSLKDIPVVIMSSENVPARISR 838
S L +PVVI SS+N+P RI +
Sbjct: 524 SPKLAHLPVVIASSDNIPERIRK 592
Score = 28.1 bits (55), Expect(4) = 1e-14
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 491 HVLAVDDSVIDRKLIEMLL 547
HVL VDD+ +DR ++ M L
Sbjct: 13 HVLVVDDTHVDRHVVSMAL 69
Score = 26.7 bits (52), Expect(3) = 0.83
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2 / -3
Query: 840 HLLILAGTFSEDMITTGMSFSEDD 769
+ LIL+G SE+ ITTG S D
Sbjct: 594 YFLILSGMLSEEAITTGRCASLGD 523
Score = 24.9 bits (48), Expect(3) = 0.83
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2 / -2
Query: 762 TLLSRSYPVMPGMQ*SVMIKFTPTS 688
T +SR PVM G+Q*S+ I T S
Sbjct: 418 TSMSRL*PVMSGIQ*SLTIMSTSCS 344
Score = 23.1 bits (44), Expect(3) = 0.83
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2 / -1
Query: 549 LSSISMSFRSMTLSSTARTWNRD 481
+ ++ ++RS +SST TW D
Sbjct: 71 IKAMETTWRSTWVSSTTSTWGDD 3
>LOC_Os08g28950:12008.t02650:unspliced-genomic two-component response regulator ARR3, putative, expressed|
Length = 796
Score = 51.0 bits (105), Expect(3) = 3e-13
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +2 / +1
Query: 686 QEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARIS 835
QE VN+I++DYCMP MTGYDLL VK + + I V SS + +S
Sbjct: 340 QEHDVNMIVSDYCMPDMTGYDLLMEVKVRTIVSRIGV*C*SSSYIFYNVS 489
Score = 37.7 bits (76), Expect(3) = 3e-13
Identities = 11/27 (40%), Positives = 22/27 (81%)
Frame = +2 / +2
Query: 836 RCLEDGAEEFFLKPVKLADMKKLKSHL 916
RCL+ GA+++ LKPVK+ D+ ++ +++
Sbjct: 713 RCLDGGAKDYILKPVKIVDLPRILNYI 793
Score = 29.9 bits (59), Expect(3) = 3e-13
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2 / +1
Query: 491 HVLAVDDSVIDRKLIEMLL 547
HVL VDD+++DR ++ M L
Sbjct: 13 HVLVVDDTLVDRHVVSMAL 69
Score = 29.9 bits (59), Expect(3) = 0.028
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -2 / -3
Query: 762 TLLSRSYPVMPGMQ*SVMIKFTPTS 688
T +S+S PVM G+Q*S+ I FT S
Sbjct: 416 TSMSKS*PVMSGIQ*SLTIMFTSCS 342
Score = 26.7 bits (52), Expect(3) = 0.028
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2 / -3
Query: 840 HLLILAGTFSEDMITTGMSFSEDD 769
+ LIL+G SE+ ITTG S D
Sbjct: 608 YFLILSGMLSEEAITTGRCASLGD 537
Score = 23.5 bits (45), Expect(3) = 0.028
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2 / -3
Query: 549 LSSISMSFRSMTLSSTARTWNRD 481
+ ++ ++RS +SST TW D
Sbjct: 71 IKAMETTWRSTRVSSTTSTWGDD 3
>LOC_Os04g41700:12004.t05469:unspliced-genomic expressed protein|
Length = 3150
Score = 58.3 bits (121), Expect(2) = 2e-10
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = -2 / -1
Query: 846 SKHLLILAGTFSEDMITTGMSFSEDDPLTLLSRS 745
S HLLI+AGTFSE+MITTGMSF+EDD T RS
Sbjct: 1974 SAHLLIIAGTFSEEMITTGMSFNEDDTCTPKMRS 1873
Score = 28.1 bits (55), Expect(2) = 2e-10
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -2
Query: 739 CHARHAVVSDDQIHAHL 689
CHARH VVSD + +L
Sbjct: 1751 CHARHVVVSDYHVDINL 1701
Score = 47.8 bits (98), Expect(3) = 6e-10
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +2 / +2
Query: 749 LLRRVKGSSSLKDIPVVIMSSENVPARISR 838
L+ V+ SSSLKDIPVVI+SSENVPA I+R
Sbjct: 1877 LILGVQVSSSLKDIPVVIISSENVPAMINR 1966
Score = 35.0 bits (70), Expect(3) = 6e-10
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2 / +3
Query: 689 EVGVNLIITDYCMPGMT 739
E+ VN+IITDY MPGMT
Sbjct: 1701 EIDVNVIITDYYMPGMT 1751
Score = 28.6 bits (56), Expect(3) = 6e-10
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2 / +3
Query: 578 DSGSKALEVLGLRDE 622
DSGSKALE+ G RDE
Sbjct: 1497 DSGSKALELHGSRDE 1541
Score = 44.1 bits (90), Expect(2) = 9e-04
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +1 / +1
Query: 760 GQGVILTEGHSGGDHVL*ECACQDQQV 840
G VI EGH+ DH *ECAC DQQV
Sbjct: 1888 GTSVIFIEGHTSCDHFF*ECACNDQQV 1968
Score = 24.9 bits (48), Expect(2) = 9e-04
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 706 DHH*LLHAGHD 738
D+H*LLHA HD
Sbjct: 1718 DNH*LLHAWHD 1750
Score = 37.7 bits (76), Expect(3) = 0.024
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -3 / -2
Query: 839 TC*SWQAHSQRT*SPPECPSVRMT 768
TC*S QAHSQ+ *S CPS++MT
Sbjct: 1967 TC*SLQAHSQKK*SQLVCPSMKMT 1896
Score = 23.5 bits (45), Expect(3) = 0.024
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2 / -3
Query: 753 SRSYPVMPGMQ*SVMIKFTPTS 688
S + VMPGM *SV+I T S
Sbjct: 1765 SVDHTVMPGM**SVIITLTSIS 1700
Score = 23.1 bits (44), Expect(3) = 0.024
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2 / -3
Query: 615 LNPSTSSALLPES 577
L+P +S ALLPES
Sbjct: 1534 LDPCSSKALLPES 1496
>LOC_Os01g02740:12001.t00167:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 12447
Score = 29.5 bits (58), Expect(3) = 2.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3 / -2
Query: 300 CRISHQRSTSTVSLKSSPPLPH 365
C+ +HQ +S V L+ S PLPH
Sbjct: 5516 CKKNHQNKSSKV*LQLSKPLPH 5451
Score = 26.3 bits (51), Expect(3) = 2.3
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1 / -3
Query: 232 GVNESCRPARLYPPRSPPSQPR 297
GV+ +C P PP P++PR
Sbjct: 12373 GVSRTCGPT*HLPPHREPARPR 12308
Score = 24.9 bits (48), Expect(3) = 2.3
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2 / -2
Query: 1208 RTRPPTKKPHVSVGS 1252
RT PPT + H+ VGS
Sbjct: 4775 RTSPPTHQKHI*VGS 4731
>LOC_Os01g71860:12001.t06478:unspliced-genomic glycosyl hydrolases family 17 protein, expressed|
Length = 2613
Score = 32.2 bits (64), Expect = 9.9
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +1 / -3
Query: 106 KEGKSWRRFAVEIRVRDLVGSCFPGKKRPXXXXXXXXVLPWCGVNESCR 252
+EGKSWR + R + C P + R PWC + CR
Sbjct: 1729 REGKSWRSRRISPRWKP*CRRCRPRQGRS*RCAWPGGCSPWCRLPPRCR 1583
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 406,897,074
Number of extensions: 5231464
Number of successful extensions: 31261
Number of sequences better than 10.0: 53
Length of query: 523
Length of database: 55,613,886
Length adjustment: 51
Effective length of query: 472
Effective length of database: 52,743,708
Effective search space: 24895030176
Effective search space used: 24895030176
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)