ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf164b16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042267.1| Zea mays ZmRR5 mRNA for response regulator 5, complete cds Length = 1654 Score = 285 bits (144), Expect = 2e-73 Identities = 201/220 (91%) Strand = Plus / Plus Query: 697 cgtgaatttgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgag 756 ||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 611 cgtgaatctcatcatcactgactactgcatgccaggcatgacaggatacgatctgctcaa 670 Query: 757 gagggtcaaggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaa 816 ||| || |||||||| ||||| || ||||||||||| |||||||||||||| |||||||| Sbjct: 671 gagagtgaaggggtcctcctcgctcaaggacattcctgtggtgatcatgtcgtctgagaa 730 Query: 817 tgtgcctgccaggatcagcaggtgcttggaggatggcgcggaggagttcttcctcaagcc 876 |||||||||| ||||||||||||||||| | || |||||||||||||||||||| ||||| Sbjct: 731 tgtgcctgcccggatcagcaggtgcttgcaagacggcgcggaggagttcttcctgaagcc 790 Query: 877 cgtgaagctcgccgacatgaagaagctcaagtctcacctg 916 ||||||||| ||||||||||||||||||||||| |||||| Sbjct: 791 cgtgaagctggccgacatgaagaagctcaagtcgcacctg 830 Score = 192 bits (97), Expect = 3e-45 Identities = 139/153 (90%) Strand = Plus / Plus Query: 457 cgccatgacggtggtggacgccgagtcccggttccacgtcctggcggtggacgacagcgt 516 ||||||||||||| ||| |||||||| || ||||| ||||| ||||||||||||||| | Sbjct: 404 cgccatgacggtgccggatgccgagtcgcgcttccatgtcctcgcggtggacgacagcct 463 Query: 517 catcgaccggaagctcatcgagatgctgctcaagacctcctcctaccaagtgaccacggt 576 | ||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 464 cgtcgacaggaaactcatcgagatgctgctcaagacctcgtcctaccaagtgaccacggt 523 Query: 577 ggactccgggagcaaggcgctggaggtgctggg 609 ||| ||||||||||||||||||||| ||||||| Sbjct: 524 ggattccgggagcaaggcgctggagctgctggg 556 Score = 93.7 bits (47), Expect = 2e-15 Identities = 62/67 (92%) Strand = Plus / Plus Query: 114 gaaatcatggaggcgatttgctgtggagattcgggtccgtgatctggtcggatcctgctt 173 |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| ||||| Sbjct: 82 gaaatcatggagccgatttgctgtggagattcgggcgcgtgatccggtcggatcttgctt 141 Query: 174 tcccggg 180 ||||||| Sbjct: 142 tcccggg 148 Score = 48.1 bits (24), Expect = 0.097 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1180 cagcagcagcctggcggtggagacctga 1207 ||||| |||||||||||||||||||||| Sbjct: 1091 cagcaacagcctggcggtggagacctga 1118
>dbj|AB042261.1| Zea mays ZmRR4 mRNA for response regulator 4, complete cds Length = 891 Score = 278 bits (140), Expect = 6e-71 Identities = 212/236 (89%) Strand = Plus / Plus Query: 681 accatcaggaggtgggcgtgaatttgatcatcactgactactgcatgccgggcatgacag 740 ||||||||||| | | ||||| | | ||||||||||||||||||||||| |||||||||| Sbjct: 271 accatcaggagatcgacgtgagtctcatcatcactgactactgcatgcccggcatgacag 330 Query: 741 gatacgatctgctgaggagggtcaaggggtcatcctcactgaaggacattccggtggtga 800 ||||||||||||| | | | || |||||||| || || || ||||||||||||||||||| Sbjct: 331 gatacgatctgctcaagcgagtgaaggggtcctcatcgctcaaggacattccggtggtga 390 Query: 801 tcatgtcctctgagaatgtgcctgccaggatcagcaggtgcttggaggatggcgcggagg 860 ||||||| |||||||| ||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 391 tcatgtcgtctgagaacgtgcctgcccggatcagcaggtgcttgcaggatggcgcggagg 450 Query: 861 agttcttcctcaagcccgtgaagctcgccgacatgaagaagctcaagtctcacctg 916 |||||||||| ||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 451 agttcttcctgaagcccgtgaagccggccgacatgaagaagctcaagtcacacctg 506 Score = 214 bits (108), Expect = 7e-52 Identities = 141/152 (92%) Strand = Plus / Plus Query: 458 gccatgacggtggtggacgccgagtcccggttccacgtcctggcggtggacgacagcgtc 517 |||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||| || Sbjct: 45 gccatgacggtgctggacgccgagtcgcggttccatgtcctggcggtggacgacagcatc 104 Query: 518 atcgaccggaagctcatcgagatgctgctcaagacctcctcctaccaagtgaccacggtg 577 |||||| ||||||||||||||||||||||||||| ||| || |||||||||||||||||| Sbjct: 105 atcgacaggaagctcatcgagatgctgctcaagagctcgtcttaccaagtgaccacggtg 164 Query: 578 gactccgggagcaaggcgctggaggtgctggg 609 || ||||||| ||||||||||||| ||||||| Sbjct: 165 gagtccgggaacaaggcgctggagctgctggg 196
>gb|AY104728.1| Zea mays PCO113156 mRNA sequence Length = 1312 Score = 270 bits (136), Expect = 1e-68 Identities = 199/220 (90%) Strand = Plus / Plus Query: 697 cgtgaatttgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgag 756 ||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 342 cgtgaatctcatcatcactgactactgcatgccaggcatgacaggatacgatctgctcaa 401 Query: 757 gagggtcaaggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaa 816 ||| | |||||||| || || || ||||||||||| |||||||||||||| |||||||| Sbjct: 402 gagaatgaaggggtcctcttcgctcaaggacattcctgtggtgatcatgtcgtctgagaa 461 Query: 817 tgtgcctgccaggatcagcaggtgcttggaggatggcgcggaggagttcttcctcaagcc 876 |||||||||| ||||||||||||||||| | || |||||||||||||||||||| ||||| Sbjct: 462 tgtgcctgcccggatcagcaggtgcttgcaagacggcgcggaggagttcttcctgaagcc 521 Query: 877 cgtgaagctcgccgacatgaagaagctcaagtctcacctg 916 ||||||||| ||||||||||||||||||||||| |||||| Sbjct: 522 cgtgaagctggccgacatgaagaagctcaagtcgcacctg 561 Score = 184 bits (93), Expect = 6e-43 Identities = 138/153 (90%) Strand = Plus / Plus Query: 457 cgccatgacggtggtggacgccgagtcccggttccacgtcctggcggtggacgacagcgt 516 ||||||||||||| || |||||||| || ||||| ||||| ||||||||||||||| | Sbjct: 135 cgccatgacggtgccagatgccgagtcgcgcttccatgtcctcgcggtggacgacagcct 194 Query: 517 catcgaccggaagctcatcgagatgctgctcaagacctcctcctaccaagtgaccacggt 576 | ||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 195 cgtcgacaggaaactcatcgagatgctgctcaagacctcgtcctaccaagtgaccacggt 254 Query: 577 ggactccgggagcaaggcgctggaggtgctggg 609 ||| ||||||||||||||||||||| ||||||| Sbjct: 255 ggattccgggagcaaggcgctggagctgctggg 287 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1183 cagcagcctggcggtggagacctga 1207 |||||||||||||||||| |||||| Sbjct: 843 cagcagcctggcggtggaaacctga 867
>ref|NM_001051955.1| Oryza sativa (japonica cultivar-group) Os01g0952500 (Os01g0952500) mRNA, complete cds Length = 1605 Score = 230 bits (116), Expect = 1e-56 Identities = 188/212 (88%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||| |||||||||||||||||||| ||||||||||| || |||||||| | |||||| | Sbjct: 636 tgataatcactgactactgcatgcctggcatgacagggtatgatctgctcaagagggtga 695 Query: 765 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 824 |||| ||||| ||| |||||||||| || || ||||||||||| |||||||||||||||| Sbjct: 696 agggatcatcttcattgaaggacataccagttgtgatcatgtcttctgagaatgtgcctg 755 Query: 825 ccaggatcagcaggtgcttggaggatggcgcggaggagttcttcctcaagcccgtgaagc 884 | ||||||| |||||||||||| ||||| || |||||||||||||| || || || |||| Sbjct: 756 caaggatcaacaggtgcttggaagatggtgcagaggagttcttcctgaaacctgtcaagc 815 Query: 885 tcgccgacatgaagaagctcaagtctcacctg 916 |||| ||||||||||||||||||||||||||| Sbjct: 816 tcgctgacatgaagaagctcaagtctcacctg 847 Score = 157 bits (79), Expect = 1e-34 Identities = 139/159 (87%) Strand = Plus / Plus Query: 457 cgccatgacggtggtggacgccgagtcccggttccacgtcctggcggtggacgacagcgt 516 ||||||||||||||| || || ||||| |||||||| ||||| |||||||| || ||| | Sbjct: 406 cgccatgacggtggttgatgcggagtcgcggttccatgtcctcgcggtggatgatagcct 465 Query: 517 catcgaccggaagctcatcgagatgctgctcaagacctcctcctaccaagtgaccacggt 576 |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||| || Sbjct: 466 gatcgacaggaagctcatcgagatgctgctcaagaactcgtcctaccaagtgaccactgt 525 Query: 577 ggactccgggagcaaggcgctggaggtgctgggattgag 615 ||| || ||||||||||| ||||| |||| |||||||| Sbjct: 526 ggattctgggagcaaggccttggagctgcttggattgag 564 Score = 105 bits (53), Expect = 5e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 113 ggaaatcatggaggcgatttgctgtggagattcgggtccgtgatctggtcggatcctgct 172 ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 65 ggaaatcatggaggcgatttgctgtggagattcgggtgtgtgatctggtcggatcttgct 124 Query: 173 ttcccggga 181 |||| |||| Sbjct: 125 ttcctggga 133 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1110 gcggcagcagaaagaggaaggcggc 1134 |||||||||| |||||||||||||| Sbjct: 993 gcggcagcagcaagaggaaggcggc 1017
>dbj|AB249658.1| Oryza sativa (japonica cultivar-group) OsRR4 mRNA for typeA response regulator 4, complete cds Length = 699 Score = 230 bits (116), Expect = 1e-56 Identities = 188/212 (88%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||| |||||||||||||||||||| ||||||||||| || |||||||| | |||||| | Sbjct: 227 tgataatcactgactactgcatgcctggcatgacagggtatgatctgctcaagagggtga 286 Query: 765 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 824 |||| ||||| ||| |||||||||| || || ||||||||||| |||||||||||||||| Sbjct: 287 agggatcatcttcattgaaggacataccagttgtgatcatgtcttctgagaatgtgcctg 346 Query: 825 ccaggatcagcaggtgcttggaggatggcgcggaggagttcttcctcaagcccgtgaagc 884 | ||||||| |||||||||||| ||||| || |||||||||||||| || || || |||| Sbjct: 347 caaggatcaacaggtgcttggaagatggtgcagaggagttcttcctgaaacctgtcaagc 406 Query: 885 tcgccgacatgaagaagctcaagtctcacctg 916 |||| ||||||||||||||||||||||||||| Sbjct: 407 tcgctgacatgaagaagctcaagtctcacctg 438 Score = 149 bits (75), Expect = 4e-32 Identities = 135/155 (87%) Strand = Plus / Plus Query: 461 atgacggtggtggacgccgagtcccggttccacgtcctggcggtggacgacagcgtcatc 520 ||||||||||| || || ||||| |||||||| ||||| |||||||| || ||| | ||| Sbjct: 1 atgacggtggttgatgcggagtcgcggttccatgtcctcgcggtggatgatagcctgatc 60 Query: 521 gaccggaagctcatcgagatgctgctcaagacctcctcctaccaagtgaccacggtggac 580 ||| ||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||| Sbjct: 61 gacaggaagctcatcgagatgctgctcaagaactcgtcctaccaagtgaccactgtggat 120 Query: 581 tccgggagcaaggcgctggaggtgctgggattgag 615 || ||||||||||| ||||| |||| |||||||| Sbjct: 121 tctgggagcaaggccttggagctgcttggattgag 155 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1110 gcggcagcagaaagaggaaggcggc 1134 |||||||||| |||||||||||||| Sbjct: 584 gcggcagcagcaagaggaaggcggc 608
>emb|AJ938073.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 4 (rr4 gene) Length = 702 Score = 230 bits (116), Expect = 1e-56 Identities = 188/212 (88%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||| |||||||||||||||||||| ||||||||||| || |||||||| | |||||| | Sbjct: 227 tgataatcactgactactgcatgcctggcatgacagggtatgatctgctcaagagggtga 286 Query: 765 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 824 |||| ||||| ||| |||||||||| || || ||||||||||| |||||||||||||||| Sbjct: 287 agggatcatcttcattgaaggacataccagttgtgatcatgtcttctgagaatgtgcctg 346 Query: 825 ccaggatcagcaggtgcttggaggatggcgcggaggagttcttcctcaagcccgtgaagc 884 | ||||||| |||||||||||| ||||| || |||||||||||||| || || || |||| Sbjct: 347 caaggatcaacaggtgcttggaagatggtgcagaggagttcttcctgaaacctgtcaagc 406 Query: 885 tcgccgacatgaagaagctcaagtctcacctg 916 |||| ||||||||||||||||||||||||||| Sbjct: 407 tcgctgacatgaagaagctcaagtctcacctg 438 Score = 149 bits (75), Expect = 4e-32 Identities = 135/155 (87%) Strand = Plus / Plus Query: 461 atgacggtggtggacgccgagtcccggttccacgtcctggcggtggacgacagcgtcatc 520 ||||||||||| || || ||||| |||||||| ||||| |||||||| || ||| | ||| Sbjct: 1 atgacggtggttgatgcggagtcgcggttccatgtcctcgcggtggatgatagcctgatc 60 Query: 521 gaccggaagctcatcgagatgctgctcaagacctcctcctaccaagtgaccacggtggac 580 ||| ||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||| Sbjct: 61 gacaggaagctcatcgagatgctgctcaagaactcgtcctaccaagtgaccactgtggat 120 Query: 581 tccgggagcaaggcgctggaggtgctgggattgag 615 || ||||||||||| ||||| |||| |||||||| Sbjct: 121 tctgggagcaaggccttggagctgcttggattgag 155 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1110 gcggcagcagaaagaggaaggcggc 1134 |||||||||| |||||||||||||| Sbjct: 584 gcggcagcagcaagaggaaggcggc 608
>dbj|AK101721.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061A20, full insert sequence Length = 1607 Score = 230 bits (116), Expect = 1e-56 Identities = 188/212 (88%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||| |||||||||||||||||||| ||||||||||| || |||||||| | |||||| | Sbjct: 638 tgataatcactgactactgcatgcctggcatgacagggtatgatctgctcaagagggtga 697 Query: 765 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 824 |||| ||||| ||| |||||||||| || || ||||||||||| |||||||||||||||| Sbjct: 698 agggatcatcttcattgaaggacataccagttgtgatcatgtcttctgagaatgtgcctg 757 Query: 825 ccaggatcagcaggtgcttggaggatggcgcggaggagttcttcctcaagcccgtgaagc 884 | ||||||| |||||||||||| ||||| || |||||||||||||| || || || |||| Sbjct: 758 caaggatcaacaggtgcttggaagatggtgcagaggagttcttcctgaaacctgtcaagc 817 Query: 885 tcgccgacatgaagaagctcaagtctcacctg 916 |||| ||||||||||||||||||||||||||| Sbjct: 818 tcgctgacatgaagaagctcaagtctcacctg 849 Score = 157 bits (79), Expect = 1e-34 Identities = 139/159 (87%) Strand = Plus / Plus Query: 457 cgccatgacggtggtggacgccgagtcccggttccacgtcctggcggtggacgacagcgt 516 ||||||||||||||| || || ||||| |||||||| ||||| |||||||| || ||| | Sbjct: 408 cgccatgacggtggttgatgcggagtcgcggttccatgtcctcgcggtggatgatagcct 467 Query: 517 catcgaccggaagctcatcgagatgctgctcaagacctcctcctaccaagtgaccacggt 576 |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||| || Sbjct: 468 gatcgacaggaagctcatcgagatgctgctcaagaactcgtcctaccaagtgaccactgt 527 Query: 577 ggactccgggagcaaggcgctggaggtgctgggattgag 615 ||| || ||||||||||| ||||| |||| |||||||| Sbjct: 528 ggattctgggagcaaggccttggagctgcttggattgag 566 Score = 105 bits (53), Expect = 5e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 113 ggaaatcatggaggcgatttgctgtggagattcgggtccgtgatctggtcggatcctgct 172 ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 66 ggaaatcatggaggcgatttgctgtggagattcgggtgtgtgatctggtcggatcttgct 125 Query: 173 ttcccggga 181 |||| |||| Sbjct: 126 ttcctggga 134 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1110 gcggcagcagaaagaggaaggcggc 1134 |||||||||| |||||||||||||| Sbjct: 995 gcggcagcagcaagaggaaggcggc 1019
>gb|AY105961.1| Zea mays PCO076606 mRNA sequence Length = 932 Score = 127 bits (64), Expect = 1e-25 Identities = 100/112 (89%) Strand = Plus / Plus Query: 487 gttccacgtcctggcggtggacgacagcgtcatcgaccggaagctcatcgagatgctgct 546 |||||| ||||||||||||||||||||| || ||| ||||||||||||||| ||| || Sbjct: 161 gttccatgtcctggcggtggacgacagcctcccggacaggaagctcatcgagaggctcct 220 Query: 547 caagacctcctcctaccaagtgaccacggtggactccgggagcaaggcgctg 598 ||||||||| |||| |||||||||||| || ||||||||||||||||||||| Sbjct: 221 caagacctcttccttccaagtgaccactgtcgactccgggagcaaggcgctg 272 Score = 103 bits (52), Expect = 2e-18 Identities = 181/224 (80%) Strand = Plus / Plus Query: 684 atcaggaggtgggcgtgaatttgatcatcactgactactgcatgccgggcatgacaggat 743 ||||||| |||| ||||| |||||||||| |||||||||||||| ||||||||||||| Sbjct: 346 atcaggatgtggctgtgaacctgatcatcacagactactgcatgcctggcatgacaggat 405 Query: 744 acgatctgctgaggagggtcaaggggtcatcctcactgaaggacattccggtggtgatca 803 | || ||||| | || | |||||| ||| || || || | || || ||||||||||||| Sbjct: 406 atgacctgctcaagaagatcaaggagtcgtcgtctctcagagatatcccggtggtgatca 465 Query: 804 tgtcctctgagaatgtgcctgccaggatcagcaggtgcttggaggatggcgcggaggagt 863 ||||||||||||| | ||| | ||||||| |||||| ||||||| || || || |||| Sbjct: 466 tgtcctctgagaacattccttcaaggatcaataggtgcctggaggaaggagctgacgagt 525 Query: 864 tcttcctcaagcccgtgaagctcgccgacatgaagaagctcaag 907 ||||||| || || ||| ||| | |||||||| ||||||||| Sbjct: 526 tcttcctaaaacctgtgcggctatcagacatgaacaagctcaag 569
>dbj|AB042268.1| Zea mays ZmRR6 mRNA for response regulator 6, complete cds Length = 1158 Score = 127 bits (64), Expect = 1e-25 Identities = 100/112 (89%) Strand = Plus / Plus Query: 487 gttccacgtcctggcggtggacgacagcgtcatcgaccggaagctcatcgagatgctgct 546 |||||| ||||||||||||||||||||| || ||| ||||||||||||||| ||| || Sbjct: 147 gttccatgtcctggcggtggacgacagcctcccggacaggaagctcatcgagaggctcct 206 Query: 547 caagacctcctcctaccaagtgaccacggtggactccgggagcaaggcgctg 598 ||||||||| |||| |||||||||||| || ||||||||||||||||||||| Sbjct: 207 caagacctcttccttccaagtgaccactgtcgactccgggagcaaggcgctg 258 Score = 103 bits (52), Expect = 2e-18 Identities = 181/224 (80%) Strand = Plus / Plus Query: 684 atcaggaggtgggcgtgaatttgatcatcactgactactgcatgccgggcatgacaggat 743 ||||||| |||| ||||| |||||||||| |||||||||||||| ||||||||||||| Sbjct: 332 atcaggatgtggctgtgaacctgatcatcacagactactgcatgcctggcatgacaggat 391 Query: 744 acgatctgctgaggagggtcaaggggtcatcctcactgaaggacattccggtggtgatca 803 | || ||||| | || | |||||| ||| || || || | || || ||||||||||||| Sbjct: 392 atgacctgctcaagaagatcaaggagtcgtcgtctctcagagatatcccggtggtgatca 451 Query: 804 tgtcctctgagaatgtgcctgccaggatcagcaggtgcttggaggatggcgcggaggagt 863 ||||||||||||| | ||| | ||||||| |||||| ||||||| || || || |||| Sbjct: 452 tgtcctctgagaacattccttcaaggatcaataggtgcctggaggaaggagctgacgagt 511 Query: 864 tcttcctcaagcccgtgaagctcgccgacatgaagaagctcaag 907 ||||||| || || ||| ||| | |||||||| ||||||||| Sbjct: 512 tcttcctaaaacctgtgcggctatcagacatgaacaagctcaag 555
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 115 bits (58), Expect = 5e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 457 cgccatgacggtggtggacgccgagtcccggttccacgtcctggcggtggacgacagcgt 516 ||||||||||||||| || || ||||| |||||||| ||||| |||||||| || ||| | Sbjct: 41941716 cgccatgacggtggttgatgcggagtcgcggttccatgtcctcgcggtggatgatagcct 41941775 Query: 517 catcgaccggaagctcatcgagatgctgctcaagacctcctcctaccaag 566 |||||| ||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 41941776 gatcgacaggaagctcatcgagatgctgctcaagaactcgtcctaccaag 41941825 Score = 105 bits (53), Expect = 5e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 113 ggaaatcatggaggcgatttgctgtggagattcgggtccgtgatctggtcggatcctgct 172 ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 41941375 ggaaatcatggaggcgatttgctgtggagattcgggtgtgtgatctggtcggatcttgct 41941434 Query: 173 ttcccggga 181 |||| |||| Sbjct: 41941435 ttcctggga 41941443 Score = 99.6 bits (50), Expect = 3e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 835 caggtgcttggaggatggcgcggaggagttcttcctcaagcccgtgaagctcgccgacat 894 |||||||||||| ||||| || |||||||||||||| || || || |||||||| ||||| Sbjct: 41943908 caggtgcttggaagatggtgcagaggagttcttcctgaaacctgtcaagctcgctgacat 41943967 Query: 895 gaagaagctcaagtctcacctg 916 |||||||||||||||||||||| Sbjct: 41943968 gaagaagctcaagtctcacctg 41943989 Score = 79.8 bits (40), Expect = 3e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 765 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 824 |||| ||||| ||| |||||||||| || || ||||||||||| |||||||||||||||| Sbjct: 41942377 agggatcatcttcattgaaggacataccagttgtgatcatgtcttctgagaatgtgcctg 41942436 Query: 825 ccaggatcagcaggtg 840 | ||||||| |||||| Sbjct: 41942437 caaggatcaacaggtg 41942452 Score = 69.9 bits (35), Expect = 3e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||| |||||||||||||||||||| ||||||||||| || |||||||| | |||||| | Sbjct: 41942196 tgataatcactgactactgcatgcctggcatgacagggtatgatctgctcaagagggtga 41942255 Query: 765 agg 767 ||| Sbjct: 41942256 agg 41942258 Score = 46.1 bits (23), Expect = 0.38 Identities = 44/51 (86%) Strand = Plus / Plus Query: 565 agtgaccacggtggactccgggagcaaggcgctggaggtgctgggattgag 615 ||||||||| ||||| || ||||||||||| ||||| |||| |||||||| Sbjct: 41941958 agtgaccactgtggattctgggagcaaggccttggagctgcttggattgag 41942008 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1110 gcggcagcagaaagaggaaggcggc 1134 |||||||||| |||||||||||||| Sbjct: 41944135 gcggcagcagcaagaggaaggcggc 41944159
>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431G06 Length = 140466 Score = 115 bits (58), Expect = 5e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 457 cgccatgacggtggtggacgccgagtcccggttccacgtcctggcggtggacgacagcgt 516 ||||||||||||||| || || ||||| |||||||| ||||| |||||||| || ||| | Sbjct: 43793 cgccatgacggtggttgatgcggagtcgcggttccatgtcctcgcggtggatgatagcct 43852 Query: 517 catcgaccggaagctcatcgagatgctgctcaagacctcctcctaccaag 566 |||||| ||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 43853 gatcgacaggaagctcatcgagatgctgctcaagaactcgtcctaccaag 43902 Score = 105 bits (53), Expect = 5e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 113 ggaaatcatggaggcgatttgctgtggagattcgggtccgtgatctggtcggatcctgct 172 ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 43452 ggaaatcatggaggcgatttgctgtggagattcgggtgtgtgatctggtcggatcttgct 43511 Query: 173 ttcccggga 181 |||| |||| Sbjct: 43512 ttcctggga 43520 Score = 99.6 bits (50), Expect = 3e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 835 caggtgcttggaggatggcgcggaggagttcttcctcaagcccgtgaagctcgccgacat 894 |||||||||||| ||||| || |||||||||||||| || || || |||||||| ||||| Sbjct: 45985 caggtgcttggaagatggtgcagaggagttcttcctgaaacctgtcaagctcgctgacat 46044 Query: 895 gaagaagctcaagtctcacctg 916 |||||||||||||||||||||| Sbjct: 46045 gaagaagctcaagtctcacctg 46066 Score = 79.8 bits (40), Expect = 3e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 765 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 824 |||| ||||| ||| |||||||||| || || ||||||||||| |||||||||||||||| Sbjct: 44454 agggatcatcttcattgaaggacataccagttgtgatcatgtcttctgagaatgtgcctg 44513 Query: 825 ccaggatcagcaggtg 840 | ||||||| |||||| Sbjct: 44514 caaggatcaacaggtg 44529 Score = 69.9 bits (35), Expect = 3e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||| |||||||||||||||||||| ||||||||||| || |||||||| | |||||| | Sbjct: 44273 tgataatcactgactactgcatgcctggcatgacagggtatgatctgctcaagagggtga 44332 Query: 765 agg 767 ||| Sbjct: 44333 agg 44335 Score = 46.1 bits (23), Expect = 0.38 Identities = 44/51 (86%) Strand = Plus / Plus Query: 565 agtgaccacggtggactccgggagcaaggcgctggaggtgctgggattgag 615 ||||||||| ||||| || ||||||||||| ||||| |||| |||||||| Sbjct: 44035 agtgaccactgtggattctgggagcaaggccttggagctgcttggattgag 44085 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1110 gcggcagcagaaagaggaaggcggc 1134 |||||||||| |||||||||||||| Sbjct: 46212 gcggcagcagcaagaggaaggcggc 46236
>ref|NM_001059883.1| Oryza sativa (japonica cultivar-group) Os04g0524300 (Os04g0524300) mRNA, complete cds Length = 841 Score = 103 bits (52), Expect = 2e-18 Identities = 145/176 (82%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||| |||||||||||||| ||||||| ||||| || || || || |||| || ||||| Sbjct: 260 tgattatcactgactactggatgccggagatgaccgggtatgaactcctgaagaaggtca 319 Query: 765 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 824 ||| ||| ||| |||||||| || || ||||||||||||||||| ||||| || || Sbjct: 320 aggagtcgtccaggctgaaggagatccctgtggtgatcatgtcctcggagaacgtctcta 379 Query: 825 ccaggatcagcaggtgcttggaggatggcgcggaggagttcttcctcaagcccgtg 880 | ||||||| ||||||||||||||| || |||||||| ||||| || ||||||||| Sbjct: 380 caaggatcaacaggtgcttggaggaaggagcggaggatttcttgctgaagcccgtg 435
>dbj|AB249654.1| Oryza sativa (japonica cultivar-group) OsRR5 mRNA for typeA response regulator 5, complete cds Length = 405 Score = 103 bits (52), Expect = 2e-18 Identities = 145/176 (82%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||| |||||||||||||| ||||||| ||||| || || || || |||| || ||||| Sbjct: 185 tgattatcactgactactggatgccggagatgaccgggtatgaactcctgaagaaggtca 244 Query: 765 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 824 ||| ||| ||| |||||||| || || ||||||||||||||||| ||||| || || Sbjct: 245 aggagtcgtccaggctgaaggagatccctgtggtgatcatgtcctcggagaacgtctcta 304 Query: 825 ccaggatcagcaggtgcttggaggatggcgcggaggagttcttcctcaagcccgtg 880 | ||||||| ||||||||||||||| || |||||||| ||||| || ||||||||| Sbjct: 305 caaggatcaacaggtgcttggaggaaggagcggaggatttcttgctgaagcccgtg 360
>emb|AJ938074.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 5 (rr5 gene) Length = 405 Score = 103 bits (52), Expect = 2e-18 Identities = 145/176 (82%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||| |||||||||||||| ||||||| ||||| || || || || |||| || ||||| Sbjct: 185 tgattatcactgactactggatgccggagatgaccgggtatgaactcctgaagaaggtca 244 Query: 765 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 824 ||| ||| ||| |||||||| || || ||||||||||||||||| ||||| || || Sbjct: 245 aggagtcgtccaggctgaaggagatccctgtggtgatcatgtcctcggagaacgtctcta 304 Query: 825 ccaggatcagcaggtgcttggaggatggcgcggaggagttcttcctcaagcccgtg 880 | ||||||| ||||||||||||||| || |||||||| ||||| || ||||||||| Sbjct: 305 caaggatcaacaggtgcttggaggaaggagcggaggatttcttgctgaagcccgtg 360
>dbj|AK106426.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-B09, full insert sequence Length = 839 Score = 103 bits (52), Expect = 2e-18 Identities = 145/176 (82%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||| |||||||||||||| ||||||| ||||| || || || || |||| || ||||| Sbjct: 260 tgattatcactgactactggatgccggagatgaccgggtatgaactcctgaagaaggtca 319 Query: 765 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 824 ||| ||| ||| |||||||| || || ||||||||||||||||| ||||| || || Sbjct: 320 aggagtcgtccaggctgaaggagatccctgtggtgatcatgtcctcggagaacgtctcta 379 Query: 825 ccaggatcagcaggtgcttggaggatggcgcggaggagttcttcctcaagcccgtg 880 | ||||||| ||||||||||||||| || |||||||| ||||| || ||||||||| Sbjct: 380 caaggatcaacaggtgcttggaggaaggagcggaggatttcttgctgaagcccgtg 435
>ref|NM_001054036.1| Oryza sativa (japonica cultivar-group) Os02g0631700 (Os02g0631700) mRNA, complete cds Length = 444 Score = 93.7 bits (47), Expect = 2e-15 Identities = 134/163 (82%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||| ||||| |||||||| ||||||| ||||| |||||||| || |||| || |||| Sbjct: 224 tgataatcacggactactggatgccggagatgacgggatacgagctcctgaagaaagtca 283 Query: 765 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 824 ||| ||||||| |||||| | || || ||||||||||||||||| ||||||||||| Sbjct: 284 aggagtcatccaagctgaagaagatccccgtggtgatcatgtcctcggagaatgtgccaa 343 Query: 825 ccaggatcagcaggtgcttggaggatggcgcggaggagttctt 867 | || |||||||| ||| | ||||| ||||||||||| ||||| Sbjct: 344 caagaatcagcagatgccttgaggaaggcgcggaggatttctt 386
>dbj|AB249656.1| Oryza sativa (japonica cultivar-group) OsRR11 mRNA for typeA response regulator 11, complete cds Length = 444 Score = 93.7 bits (47), Expect = 2e-15 Identities = 134/163 (82%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||| ||||| |||||||| ||||||| ||||| |||||||| || |||| || |||| Sbjct: 224 tgataatcacggactactggatgccggagatgacgggatacgagctcctgaagaaagtca 283 Query: 765 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 824 ||| ||||||| |||||| | || || ||||||||||||||||| ||||||||||| Sbjct: 284 aggagtcatccaagctgaagaagatccccgtggtgatcatgtcctcggagaatgtgccaa 343 Query: 825 ccaggatcagcaggtgcttggaggatggcgcggaggagttctt 867 | || |||||||| ||| | ||||| ||||||||||| ||||| Sbjct: 344 caagaatcagcagatgccttgaggaaggcgcggaggatttctt 386
>gb|DQ531611.1| Musa acuminata clone 1-59 reponse regulator 6 mRNA, partial cds Length = 468 Score = 83.8 bits (42), Expect = 2e-12 Identities = 93/110 (84%) Strand = Plus / Plus Query: 707 atcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtcaag 766 ||||||||||||||||||||||| || |||||||||||||||||||| | || | ||||| Sbjct: 296 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 355 Query: 767 gggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaa 816 | ||| || || | | |||||| ||||| ||||||||||| || ||||| Sbjct: 356 gagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaa 405 Score = 71.9 bits (36), Expect = 7e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 487 gttccacgtcctggcggtggacgacagcgtcatcgaccggaagctcatcgagatgctgct 546 |||||| ||| |||| ||||| ||||||||| | ||| ||||||||||||||| ||| || Sbjct: 100 gttccatgtcttggccgtggatgacagcgtccttgacaggaagctcatcgagaggctcct 159 Query: 547 caagacctcctcctaccaagtgaccacggtggactccgggagcaaggc 594 |||||| || || | |||||| ||||| ||||| || |||| |||||| Sbjct: 160 caagacatcttcgttccaagttaccactgtggattctgggaccaaggc 207
>gb|DQ683568.1| Oryza sativa (japonica cultivar-group) response regulator (RR) mRNA, complete cds Length = 633 Score = 77.8 bits (39), Expect = 1e-10 Identities = 141/175 (80%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||||||||| |||||||| ||||||| ||||| || ||||| ||||| | || | ||| Sbjct: 413 tgatcatcacggactactggatgccggagatgaccgggtacgacctgctcaagaagatca 472 Query: 765 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 824 ||| || || |||||| | || ||||||||||| ||||| || ||||| ||||| Sbjct: 473 aggaatcgtctgagctgaagcagatcccggtggtgataatgtcgtcagagaacgtgccca 532 Query: 825 ccaggatcagcaggtgcttggaggatggcgcggaggagttcttcctcaagcccgt 879 | ||||||||||| |||||||| || ||||||||||| ||| | ||||||||||| Sbjct: 533 caaggatcagcagatgcttggaagaaggcgcggaggacttcctgctcaagcccgt 587
>dbj|AB249657.1| Oryza sativa (japonica cultivar-group) OsRR7 mRNA for typeA response regulator 7, complete cds Length = 621 Score = 77.8 bits (39), Expect = 1e-10 Identities = 141/175 (80%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||||||||| |||||||| ||||||| ||||| || ||||| ||||| | || | ||| Sbjct: 401 tgatcatcacggactactggatgccggagatgaccgggtacgacctgctcaagaagatca 460 Query: 765 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 824 ||| || || |||||| | || ||||||||||| ||||| || ||||| ||||| Sbjct: 461 aggaatcgtctgagctgaagcagatcccggtggtgataatgtcgtcagagaacgtgccca 520 Query: 825 ccaggatcagcaggtgcttggaggatggcgcggaggagttcttcctcaagcccgt 879 | ||||||||||| |||||||| || ||||||||||| ||| | ||||||||||| Sbjct: 521 caaggatcagcagatgcttggaagaaggcgcggaggacttcctgctcaagcccgt 575
>emb|AJ938078.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 9 (rr9 gene) Length = 606 Score = 77.8 bits (39), Expect = 1e-10 Identities = 96/115 (83%) Strand = Plus / Plus Query: 487 gttccacgtcctggcggtggacgacagcgtcatcgaccggaagctcatcgagatgctgct 546 |||||| |||||||||||||| || ||| | ||| ||||||||||||||| ||| || Sbjct: 24 gttccatgtcctggcggtggatgatagccttcctgacaggaagctcatcgagaggctact 83 Query: 547 caagacctcctcctaccaagtgaccacggtggactccgggagcaaggcgctggag 601 ||||||||| || | |||||| ||||| || || |||||||||||||| |||||| Sbjct: 84 caagacctcttctttccaagttaccactgttgattccgggagcaaggctctggag 138 Score = 67.9 bits (34), Expect = 1e-07 Identities = 43/46 (93%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatct 750 |||||||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 212 tgatcatcacagactactgcatgcctggcatgacaggatatgatct 257
>emb|AJ938076.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 7 (rr7 gene) Length = 621 Score = 77.8 bits (39), Expect = 1e-10 Identities = 141/175 (80%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||||||||| |||||||| ||||||| ||||| || ||||| ||||| | || | ||| Sbjct: 401 tgatcatcacggactactggatgccggagatgaccgggtacgacctgctcaagaagatca 460 Query: 765 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 824 ||| || || |||||| | || ||||||||||| ||||| || ||||| ||||| Sbjct: 461 aggaatcgtctgagctgaagcagatcccggtggtgataatgtcgtcagagaacgtgccca 520 Query: 825 ccaggatcagcaggtgcttggaggatggcgcggaggagttcttcctcaagcccgt 879 | ||||||||||| |||||||| || ||||||||||| ||| | ||||||||||| Sbjct: 521 caaggatcagcagatgcttggaagaaggcgcggaggacttcctgctcaagcccgt 575
>dbj|AB024291.1| Zea mays ZmRR2 mRNA, complete cds Length = 793 Score = 77.8 bits (39), Expect = 1e-10 Identities = 141/175 (80%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||||||||| |||||||| ||||| || ||||| || ||||| ||||||| | || | Sbjct: 329 tgatcatcacggactactggatgcccgggatgaccgggtacgagctgctgaagcacgtga 388 Query: 765 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 824 ||| ||| || | ||| || ||| ||||||||||||||||| || ||||| ||||| Sbjct: 389 aggagtcgtcggcgctgcgggccatcccggtggtgatcatgtcgtcggagaacgtgccca 448 Query: 825 ccaggatcagcaggtgcttggaggatggcgcggaggagttcttcctcaagcccgt 879 || | |||||| ||||| ||||||| ||||| ||||| ||| ||||||||||||| Sbjct: 449 cccgcatcagccggtgcctggaggagggcgccgaggacttcctcctcaagcccgt 503
>dbj|AB031012.1| Zea mays ZmRR2 gene for response regulator 2, complete cds Length = 3846 Score = 77.8 bits (39), Expect = 1e-10 Identities = 141/175 (80%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||||||||| |||||||| ||||| || ||||| || ||||| ||||||| | || | Sbjct: 3382 tgatcatcacggactactggatgcccgggatgaccgggtacgagctgctgaagcacgtga 3441 Query: 765 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 824 ||| ||| || | ||| || ||| ||||||||||||||||| || ||||| ||||| Sbjct: 3442 aggagtcgtcggcgctgcgggccatcccggtggtgatcatgtcgtcggagaacgtgccca 3501 Query: 825 ccaggatcagcaggtgcttggaggatggcgcggaggagttcttcctcaagcccgt 879 || | |||||| ||||| ||||||| ||||| ||||| ||| ||||||||||||| Sbjct: 3502 cccgcatcagccggtgcctggaggagggcgccgaggacttcctcctcaagcccgt 3556
>dbj|AB042260.1| Zea mays ZmRR3 mRNA for response regulator, complete cds Length = 545 Score = 77.8 bits (39), Expect = 1e-10 Identities = 141/175 (80%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 ||||||| || |||||||| ||||| | ||||| |||||||| || || | || | ||| Sbjct: 232 tgatcattaccgactactggatgcccgagatgactggatacgagctcctcaagaagatca 291 Query: 765 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 824 ||| ||| ||| |||||||| || || ||||||||||||||||| ||||| ||||| Sbjct: 292 aggagtcgtccaggctgaaggagatccccgtggtgatcatgtcctcagagaacgtgccga 351 Query: 825 ccaggatcagcaggtgcttggaggatggcgcggaggagttcttcctcaagcccgt 879 | ||||||| ||||||| ||||||| ||||| ||||| ||| | || |||||||| Sbjct: 352 caaggatcaacaggtgcctggaggaaggcgccgaggatttcctgctgaagcccgt 406
>emb|CT827985.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA126I16, full insert sequence Length = 931 Score = 73.8 bits (37), Expect = 2e-09 Identities = 58/65 (89%) Strand = Plus / Plus Query: 686 caggaggtgggcgtgaatttgatcatcactgactactgcatgccgggcatgacaggatac 745 |||||||| || ||||| |||||||||| |||||||||||||| |||||||||||||| Sbjct: 413 caggaggttggagtgaacctgatcatcacagactactgcatgcctggcatgacaggatat 472 Query: 746 gatct 750 ||||| Sbjct: 473 gatct 477 Score = 65.9 bits (33), Expect = 4e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 525 ggaagctcatcgagatgctgctcaagacctcctcctaccaagtgaccacggtggactccg 584 ||||||||||||||| ||| ||||||||||| || | |||||| ||||| || || || | Sbjct: 282 ggaagctcatcgagaggctactcaagacctcttctttccaagtaaccactgttgattcgg 341 Query: 585 ggagcaaggcgctggag 601 |||||||||| |||||| Sbjct: 342 ggagcaaggctctggag 358
>ref|NM_001072650.1| Oryza sativa (japonica cultivar-group) Os12g0139400 (Os12g0139400) mRNA, complete cds Length = 2061 Score = 73.8 bits (37), Expect = 2e-09 Identities = 58/65 (89%) Strand = Plus / Plus Query: 686 caggaggtgggcgtgaatttgatcatcactgactactgcatgccgggcatgacaggatac 745 |||||||| || ||||| |||||||||| |||||||||||||| |||||||||||||| Sbjct: 1648 caggaggttggagtgaacctgatcatcacagactactgcatgcctggcatgacaggatat 1707 Query: 746 gatct 750 ||||| Sbjct: 1708 gatct 1712 Score = 65.9 bits (33), Expect = 4e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 525 ggaagctcatcgagatgctgctcaagacctcctcctaccaagtgaccacggtggactccg 584 ||||||||||||||| ||| ||||||||||| || | |||||| ||||| || || || | Sbjct: 1517 ggaagctcatcgagaggctactcaagacctcttctttccaagtaaccactgttgattcgg 1576 Query: 585 ggagcaaggcgctggag 601 |||||||||| |||||| Sbjct: 1577 ggagcaaggctctggag 1593
>ref|NM_001072254.1| Oryza sativa (japonica cultivar-group) Os11g0143300 (Os11g0143300) mRNA, complete cds Length = 919 Score = 73.8 bits (37), Expect = 2e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 525 ggaagctcatcgagatgctgctcaagacctcctcctaccaagtgaccacggtggactccg 584 ||||||||||||||| ||| ||||||||||| || | |||||| ||||| || || |||| Sbjct: 151 ggaagctcatcgagaggctactcaagacctcttctttccaagttaccactgttgattccg 210 Query: 585 ggagcaaggcgctggag 601 |||||||||| |||||| Sbjct: 211 ggagcaaggctctggag 227 Score = 67.9 bits (34), Expect = 1e-07 Identities = 43/46 (93%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatct 750 |||||||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 301 tgatcatcacagactactgcatgcctggcatgacaggatatgatct 346
>dbj|AB249660.1| Oryza sativa (japonica cultivar-group) OsRR10 mRNA for typeA response regulator 10, complete cds Length = 606 Score = 73.8 bits (37), Expect = 2e-09 Identities = 58/65 (89%) Strand = Plus / Plus Query: 686 caggaggtgggcgtgaatttgatcatcactgactactgcatgccgggcatgacaggatac 745 |||||||| || ||||| |||||||||| |||||||||||||| |||||||||||||| Sbjct: 193 caggaggttggagtgaacctgatcatcacagactactgcatgcctggcatgacaggatat 252 Query: 746 gatct 750 ||||| Sbjct: 253 gatct 257 Score = 65.9 bits (33), Expect = 4e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 525 ggaagctcatcgagatgctgctcaagacctcctcctaccaagtgaccacggtggactccg 584 ||||||||||||||| ||| ||||||||||| || | |||||| ||||| || || || | Sbjct: 62 ggaagctcatcgagaggctactcaagacctcttctttccaagtaaccactgttgattcgg 121 Query: 585 ggagcaaggcgctggag 601 |||||||||| |||||| Sbjct: 122 ggagcaaggctctggag 138
>dbj|AB249659.1| Oryza sativa (japonica cultivar-group) OsRR9 mRNA for typeA response regulator 9, complete cds Length = 606 Score = 73.8 bits (37), Expect = 2e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 525 ggaagctcatcgagatgctgctcaagacctcctcctaccaagtgaccacggtggactccg 584 ||||||||||||||| ||| ||||||||||| || | |||||| ||||| || || |||| Sbjct: 62 ggaagctcatcgagaggctactcaagacctcttctttccaagttaccactgttgattccg 121 Query: 585 ggagcaaggcgctggag 601 |||||||||| |||||| Sbjct: 122 ggagcaaggctctggag 138 Score = 67.9 bits (34), Expect = 1e-07 Identities = 43/46 (93%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatct 750 |||||||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 212 tgatcatcacagactactgcatgcctggcatgacaggatatgatct 257
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 73.8 bits (37), Expect = 2e-09 Identities = 58/65 (89%) Strand = Plus / Plus Query: 686 caggaggtgggcgtgaatttgatcatcactgactactgcatgccgggcatgacaggatac 745 |||||||| || ||||| |||||||||| |||||||||||||| |||||||||||||| Sbjct: 1915427 caggaggttggagtgaacctgatcatcacagactactgcatgcctggcatgacaggatat 1915486 Query: 746 gatct 750 ||||| Sbjct: 1915487 gatct 1915491 Score = 46.1 bits (23), Expect = 0.38 Identities = 29/31 (93%) Strand = Plus / Plus Query: 525 ggaagctcatcgagatgctgctcaagacctc 555 ||||||||||||||| ||| ||||||||||| Sbjct: 1915100 ggaagctcatcgagaggctactcaagacctc 1915130
>dbj|AK058585.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-G01, full insert sequence Length = 919 Score = 73.8 bits (37), Expect = 2e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 525 ggaagctcatcgagatgctgctcaagacctcctcctaccaagtgaccacggtggactccg 584 ||||||||||||||| ||| ||||||||||| || | |||||| ||||| || || |||| Sbjct: 151 ggaagctcatcgagaggctactcaagacctcttctttccaagttaccactgttgattccg 210 Query: 585 ggagcaaggcgctggag 601 |||||||||| |||||| Sbjct: 211 ggagcaaggctctggag 227 Score = 67.9 bits (34), Expect = 1e-07 Identities = 43/46 (93%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatct 750 |||||||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 301 tgatcatcacagactactgcatgcctggcatgacaggatatgatct 346
>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128619 Score = 73.8 bits (37), Expect = 2e-09 Identities = 58/65 (89%) Strand = Plus / Plus Query: 686 caggaggtgggcgtgaatttgatcatcactgactactgcatgccgggcatgacaggatac 745 |||||||| || ||||| |||||||||| |||||||||||||| |||||||||||||| Sbjct: 110118 caggaggttggagtgaacctgatcatcacagactactgcatgcctggcatgacaggatat 110177 Query: 746 gatct 750 ||||| Sbjct: 110178 gatct 110182 Score = 46.1 bits (23), Expect = 0.38 Identities = 29/31 (93%) Strand = Plus / Plus Query: 525 ggaagctcatcgagatgctgctcaagacctc 555 ||||||||||||||| ||| ||||||||||| Sbjct: 109791 ggaagctcatcgagaggctactcaagacctc 109821
>emb|AL928752.2|CNS08CBP Oryza sativa chromosome 12, . BAC OSJNBb0034E23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107247 Score = 73.8 bits (37), Expect = 2e-09 Identities = 58/65 (89%) Strand = Plus / Minus Query: 686 caggaggtgggcgtgaatttgatcatcactgactactgcatgccgggcatgacaggatac 745 |||||||| || ||||| |||||||||| |||||||||||||| |||||||||||||| Sbjct: 52794 caggaggttggagtgaacctgatcatcacagactactgcatgcctggcatgacaggatat 52735 Query: 746 gatct 750 ||||| Sbjct: 52734 gatct 52730 Score = 46.1 bits (23), Expect = 0.38 Identities = 29/31 (93%) Strand = Plus / Minus Query: 525 ggaagctcatcgagatgctgctcaagacctc 555 ||||||||||||||| ||| ||||||||||| Sbjct: 53121 ggaagctcatcgagaggctactcaagacctc 53091
>emb|CT833475.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA022O21, full insert sequence Length = 946 Score = 71.9 bits (36), Expect = 7e-09 Identities = 143/176 (81%), Gaps = 2/176 (1%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||||||||| |||||||| ||||| |||||||| || ||||| || || | | | |||| Sbjct: 393 tgatcatcaccgactactggatgcccggcatgaccggctacgagctcctcaagcgcgtca 452 Query: 765 aggggtcatcctca-ctgaaggacattccggtggtgatcatgtcctctgagaatgtgcct 823 ||| || || ||| || ||||| || ||||||||||||||||| || ||||| ||||| Sbjct: 453 aggaatcgtc-tcagctcaaggagatcccggtggtgatcatgtcgtcggagaacgtgccg 511 Query: 824 gccaggatcagcaggtgcttggaggatggcgcggaggagttcttcctcaagcccgt 879 | |||||||| ||||| ||||||| ||||| ||||| ||| | ||||||||||| Sbjct: 512 aaccggatcagccggtgcctggaggagggcgccgaggacttcctgctcaagcccgt 567
>ref|NM_001060766.1| Oryza sativa (japonica cultivar-group) Os04g0673300 (Os04g0673300) mRNA, complete cds Length = 1011 Score = 71.9 bits (36), Expect = 7e-09 Identities = 143/176 (81%), Gaps = 2/176 (1%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||||||||| |||||||| ||||| |||||||| || ||||| || || | | | |||| Sbjct: 398 tgatcatcaccgactactggatgcccggcatgaccggctacgagctcctcaagcgcgtca 457 Query: 765 aggggtcatcctca-ctgaaggacattccggtggtgatcatgtcctctgagaatgtgcct 823 ||| || || ||| || ||||| || ||||||||||||||||| || ||||| ||||| Sbjct: 458 aggaatcgtc-tcagctcaaggagatcccggtggtgatcatgtcgtcggagaacgtgccg 516 Query: 824 gccaggatcagcaggtgcttggaggatggcgcggaggagttcttcctcaagcccgt 879 | |||||||| ||||| ||||||| ||||| ||||| ||| | ||||||||||| Sbjct: 517 aaccggatcagccggtgcctggaggagggcgccgaggacttcctgctcaagcccgt 572
>dbj|AB249653.1| Oryza sativa (japonica cultivar-group) OsRR6 mRNA for typeA response regulator 6, complete cds Length = 513 Score = 71.9 bits (36), Expect = 7e-09 Identities = 143/176 (81%), Gaps = 2/176 (1%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||||||||| |||||||| ||||| |||||||| || ||||| || || | | | |||| Sbjct: 296 tgatcatcaccgactactggatgcccggcatgaccggctacgagctcctcaagcgcgtca 355 Query: 765 aggggtcatcctca-ctgaaggacattccggtggtgatcatgtcctctgagaatgtgcct 823 ||| || || ||| || ||||| || ||||||||||||||||| || ||||| ||||| Sbjct: 356 aggaatcgtc-tcagctcaaggagatcccggtggtgatcatgtcgtcggagaacgtgccg 414 Query: 824 gccaggatcagcaggtgcttggaggatggcgcggaggagttcttcctcaagcccgt 879 | |||||||| ||||| ||||||| ||||| ||||| ||| | ||||||||||| Sbjct: 415 aaccggatcagccggtgcctggaggagggcgccgaggacttcctgctcaagcccgt 470
>emb|AJ938075.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 6 (rr6 gene) Length = 513 Score = 71.9 bits (36), Expect = 7e-09 Identities = 143/176 (81%), Gaps = 2/176 (1%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||||||||| |||||||| ||||| |||||||| || ||||| || || | | | |||| Sbjct: 296 tgatcatcaccgactactggatgcccggcatgaccggctacgagctcctcaagcgcgtca 355 Query: 765 aggggtcatcctca-ctgaaggacattccggtggtgatcatgtcctctgagaatgtgcct 823 ||| || || ||| || ||||| || ||||||||||||||||| || ||||| ||||| Sbjct: 356 aggaatcgtc-tcagctcaaggagatcccggtggtgatcatgtcgtcggagaacgtgccg 414 Query: 824 gccaggatcagcaggtgcttggaggatggcgcggaggagttcttcctcaagcccgt 879 | |||||||| ||||| ||||||| ||||| ||||| ||| | ||||||||||| Sbjct: 415 aaccggatcagccggtgcctggaggagggcgccgaggacttcctgctcaagcccgt 470
>dbj|AK059734.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B01, full insert sequence Length = 1011 Score = 71.9 bits (36), Expect = 7e-09 Identities = 143/176 (81%), Gaps = 2/176 (1%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||||||||| |||||||| ||||| |||||||| || ||||| || || | | | |||| Sbjct: 398 tgatcatcaccgactactggatgcccggcatgaccggctacgagctcctcaagcgcgtca 457 Query: 765 aggggtcatcctca-ctgaaggacattccggtggtgatcatgtcctctgagaatgtgcct 823 ||| || || ||| || ||||| || ||||||||||||||||| || ||||| ||||| Sbjct: 458 aggaatcgtc-tcagctcaaggagatcccggtggtgatcatgtcgtcggagaacgtgccg 516 Query: 824 gccaggatcagcaggtgcttggaggatggcgcggaggagttcttcctcaagcccgt 879 | |||||||| ||||| ||||||| ||||| ||||| ||| | ||||||||||| Sbjct: 517 aaccggatcagccggtgcctggaggagggcgccgaggacttcctgctcaagcccgt 572
>emb|CT833577.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA124K08, full insert sequence Length = 1279 Score = 67.9 bits (34), Expect = 1e-07 Identities = 64/74 (86%) Strand = Plus / Plus Query: 794 gtggtgatcatgtcctctgagaatgtgcctgccaggatcagcaggtgcttggaggatggc 853 |||| |||||||||||| ||||||||||| | || |||||||| ||| ||||||| ||| Sbjct: 77 gtggcgatcatgtcctcggagaatgtgccgacaagaatcagcagatgcctggaggaaggc 136 Query: 854 gcggaggagttctt 867 |||||||| ||||| Sbjct: 137 gcggaggatttctt 150
>emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0403D02, complete sequence Length = 138387 Score = 67.9 bits (34), Expect = 1e-07 Identities = 82/98 (83%) Strand = Plus / Plus Query: 782 aaggacattccggtggtgatcatgtcctctgagaatgtgcctgccaggatcagcaggtgc 841 ||||| || ||||||||||||||||| || ||||| ||||| | |||||||| ||||| Sbjct: 32969 aaggagatcccggtggtgatcatgtcgtcggagaacgtgccgaaccggatcagccggtgc 33028 Query: 842 ttggaggatggcgcggaggagttcttcctcaagcccgt 879 ||||||| ||||| ||||| ||| | ||||||||||| Sbjct: 33029 ctggaggagggcgccgaggacttcctgctcaagcccgt 33066
>emb|AL732355.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0322F07, complete sequence Length = 100419 Score = 67.9 bits (34), Expect = 1e-07 Identities = 82/98 (83%) Strand = Plus / Plus Query: 782 aaggacattccggtggtgatcatgtcctctgagaatgtgcctgccaggatcagcaggtgc 841 ||||| || ||||||||||||||||| || ||||| ||||| | |||||||| ||||| Sbjct: 100007 aaggagatcccggtggtgatcatgtcgtcggagaacgtgccgaaccggatcagccggtgc 100066 Query: 842 ttggaggatggcgcggaggagttcttcctcaagcccgt 879 ||||||| ||||| ||||| ||| | ||||||||||| Sbjct: 100067 ctggaggagggcgccgaggacttcctgctcaagcccgt 100104
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06, complete sequence Length = 185449 Score = 67.9 bits (34), Expect = 1e-07 Identities = 43/46 (93%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatct 750 |||||||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 68252 tgatcatcacagactactgcatgcctggcatgacaggatatgatct 68297 Score = 46.1 bits (23), Expect = 0.38 Identities = 29/31 (93%) Strand = Plus / Plus Query: 525 ggaagctcatcgagatgctgctcaagacctc 555 ||||||||||||||| ||| ||||||||||| Sbjct: 67884 ggaagctcatcgagaggctactcaagacctc 67914
>emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004A17, complete sequence Length = 159894 Score = 67.9 bits (34), Expect = 1e-07 Identities = 82/98 (83%) Strand = Plus / Plus Query: 782 aaggacattccggtggtgatcatgtcctctgagaatgtgcctgccaggatcagcaggtgc 841 ||||| || ||||||||||||||||| || ||||| ||||| | |||||||| ||||| Sbjct: 134765 aaggagatcccggtggtgatcatgtcgtcggagaacgtgccgaaccggatcagccggtgc 134824 Query: 842 ttggaggatggcgcggaggagttcttcctcaagcccgt 879 ||||||| ||||| ||||| ||| | ||||||||||| Sbjct: 134825 ctggaggagggcgccgaggacttcctgctcaagcccgt 134862
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 67.9 bits (34), Expect = 1e-07 Identities = 43/46 (93%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatct 750 |||||||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 1996697 tgatcatcacagactactgcatgcctggcatgacaggatatgatct 1996742 Score = 46.1 bits (23), Expect = 0.38 Identities = 29/31 (93%) Strand = Plus / Plus Query: 525 ggaagctcatcgagatgctgctcaagacctc 555 ||||||||||||||| ||| ||||||||||| Sbjct: 1996329 ggaagctcatcgagaggctactcaagacctc 1996359
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 67.9 bits (34), Expect = 1e-07 Identities = 82/98 (83%) Strand = Plus / Plus Query: 782 aaggacattccggtggtgatcatgtcctctgagaatgtgcctgccaggatcagcaggtgc 841 ||||| || ||||||||||||||||| || ||||| ||||| | |||||||| ||||| Sbjct: 34411691 aaggagatcccggtggtgatcatgtcgtcggagaacgtgccgaaccggatcagccggtgc 34411750 Query: 842 ttggaggatggcgcggaggagttcttcctcaagcccgt 879 ||||||| ||||| ||||| ||| | ||||||||||| Sbjct: 34411751 ctggaggagggcgccgaggacttcctgctcaagcccgt 34411788 Score = 63.9 bits (32), Expect = 2e-06 Identities = 62/72 (86%) Strand = Plus / Minus Query: 769 gtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctgccag 828 |||||| ||| |||||||||| || || |||||||| || ||||||||||||||||| | Sbjct: 24696060 gtcatcttcattgaaggacataccagttgtgatcatttcttctgagaatgtgcctgcaat 24696001 Query: 829 gatcagcaggtg 840 ||||| |||||| Sbjct: 24696000 gatcaacaggtg 24695989 Score = 52.0 bits (26), Expect = 0.006 Identities = 41/46 (89%) Strand = Plus / Plus Query: 835 caggtgcttggaggatggcgcggaggagttcttcctcaagcccgtg 880 ||||||||||||||| || |||||||| ||||| || ||||||||| Sbjct: 26201427 caggtgcttggaggaaggagcggaggatttcttgctgaagcccgtg 26201472 Score = 48.1 bits (24), Expect = 0.097 Identities = 33/36 (91%) Strand = Plus / Minus Query: 705 tgatcatcactgactactgcatgccgggcatgacag 740 |||| ||||||||||||| |||||| |||||||||| Sbjct: 24696240 tgataatcactgactactacatgcctggcatgacag 24696205 Score = 44.1 bits (22), Expect = 1.5 Identities = 34/38 (89%) Strand = Plus / Plus Query: 779 ctgaaggacattccggtggtgatcatgtcctctgagaa 816 |||||||| || || ||||||||||||||||| ||||| Sbjct: 26201282 ctgaaggagatccctgtggtgatcatgtcctcggagaa 26201319
>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05, complete sequence Length = 164943 Score = 67.9 bits (34), Expect = 1e-07 Identities = 82/98 (83%) Strand = Plus / Plus Query: 782 aaggacattccggtggtgatcatgtcctctgagaatgtgcctgccaggatcagcaggtgc 841 ||||| || ||||||||||||||||| || ||||| ||||| | |||||||| ||||| Sbjct: 29176 aaggagatcccggtggtgatcatgtcgtcggagaacgtgccgaaccggatcagccggtgc 29235 Query: 842 ttggaggatggcgcggaggagttcttcctcaagcccgt 879 ||||||| ||||| ||||| ||| | ||||||||||| Sbjct: 29236 ctggaggagggcgccgaggacttcctgctcaagcccgt 29273
>dbj|AK120926.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035P07, full insert sequence Length = 825 Score = 67.9 bits (34), Expect = 1e-07 Identities = 43/46 (93%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatct 750 |||||||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 294 tgatcatcacagactactgcatgcctggcatgacaggatatgatct 339 Score = 46.1 bits (23), Expect = 0.38 Identities = 29/31 (93%) Strand = Plus / Plus Query: 525 ggaagctcatcgagatgctgctcaagacctc 555 ||||||||||||||| ||| ||||||||||| Sbjct: 123 ggaagctcatcgagaggctactcaagacctc 153
>emb|CR855187.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0103O01, complete sequence Length = 105035 Score = 63.9 bits (32), Expect = 2e-06 Identities = 62/72 (86%) Strand = Plus / Minus Query: 769 gtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctgccag 828 |||||| ||| |||||||||| || || |||||||| || ||||||||||||||||| | Sbjct: 55895 gtcatcttcattgaaggacataccagttgtgatcatttcttctgagaatgtgcctgcaat 55836 Query: 829 gatcagcaggtg 840 ||||| |||||| Sbjct: 55835 gatcaacaggtg 55824 Score = 48.1 bits (24), Expect = 0.097 Identities = 33/36 (91%) Strand = Plus / Minus Query: 705 tgatcatcactgactactgcatgccgggcatgacag 740 |||| ||||||||||||| |||||| |||||||||| Sbjct: 56075 tgataatcactgactactacatgcctggcatgacag 56040
>ref|NM_001059722.1| Oryza sativa (japonica cultivar-group) Os04g0494400 (Os04g0494400) mRNA, complete cds Length = 1968 Score = 63.9 bits (32), Expect = 2e-06 Identities = 62/72 (86%) Strand = Plus / Plus Query: 769 gtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctgccag 828 |||||| ||| |||||||||| || || |||||||| || ||||||||||||||||| | Sbjct: 759 gtcatcttcattgaaggacataccagttgtgatcatttcttctgagaatgtgcctgcaat 818 Query: 829 gatcagcaggtg 840 ||||| |||||| Sbjct: 819 gatcaacaggtg 830 Score = 48.1 bits (24), Expect = 0.097 Identities = 33/36 (91%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacag 740 |||| ||||||||||||| |||||| |||||||||| Sbjct: 579 tgataatcactgactactacatgcctggcatgacag 614
>dbj|AK109703.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-F10, full insert sequence Length = 1968 Score = 63.9 bits (32), Expect = 2e-06 Identities = 62/72 (86%) Strand = Plus / Plus Query: 769 gtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctgccag 828 |||||| ||| |||||||||| || || |||||||| || ||||||||||||||||| | Sbjct: 759 gtcatcttcattgaaggacataccagttgtgatcatttcttctgagaatgtgcctgcaat 818 Query: 829 gatcagcaggtg 840 ||||| |||||| Sbjct: 819 gatcaacaggtg 830 Score = 48.1 bits (24), Expect = 0.097 Identities = 33/36 (91%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacag 740 |||| ||||||||||||| |||||| |||||||||| Sbjct: 579 tgataatcactgactactacatgcctggcatgacag 614
>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11, complete sequence Length = 133856 Score = 63.9 bits (32), Expect = 2e-06 Identities = 62/72 (86%) Strand = Plus / Minus Query: 769 gtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctgccag 828 |||||| ||| |||||||||| || || |||||||| || ||||||||||||||||| | Sbjct: 85583 gtcatcttcattgaaggacataccagttgtgatcatttcttctgagaatgtgcctgcaat 85524 Query: 829 gatcagcaggtg 840 ||||| |||||| Sbjct: 85523 gatcaacaggtg 85512 Score = 48.1 bits (24), Expect = 0.097 Identities = 33/36 (91%) Strand = Plus / Minus Query: 705 tgatcatcactgactactgcatgccgggcatgacag 740 |||| ||||||||||||| |||||| |||||||||| Sbjct: 85763 tgataatcactgactactacatgcctggcatgacag 85728
>ref|NM_001055148.1| Oryza sativa (japonica cultivar-group) Os02g0830200 (Os02g0830200) mRNA, complete cds Length = 396 Score = 58.0 bits (29), Expect = 1e-04 Identities = 92/113 (81%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||||||||| || ||||||||||||| |||||||| | |||||| || | |||||||| Sbjct: 173 tgatcatcacggattactgcatgccggagatgacagggttcgatctcctcaagagggtca 232 Query: 765 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaat 817 ||| ||| | |||||||| |||||||||||| | ||||| || |||||| Sbjct: 233 aggagtcggcggagctgaaggagattccggtggtgctaatgtcgtcggagaat 285
>dbj|AB249655.1| Oryza sativa (japonica cultivar-group) OsRR3 mRNA for typeA response regulator 3, complete cds Length = 396 Score = 58.0 bits (29), Expect = 1e-04 Identities = 92/113 (81%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||||||||| || ||||||||||||| |||||||| | |||||| || | |||||||| Sbjct: 173 tgatcatcacggattactgcatgccggagatgacagggttcgatctcctcaagagggtca 232 Query: 765 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaat 817 ||| ||| | |||||||| |||||||||||| | ||||| || |||||| Sbjct: 233 aggagtcggcggagctgaaggagattccggtggtgctaatgtcgtcggagaat 285
>emb|AJ938072.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 3 (rr3 gene) Length = 396 Score = 58.0 bits (29), Expect = 1e-04 Identities = 92/113 (81%) Strand = Plus / Plus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||||||||| || ||||||||||||| |||||||| | |||||| || | |||||||| Sbjct: 173 tgatcatcacggattactgcatgccggagatgacagggttcgatctcctcaagagggtca 232 Query: 765 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaat 817 ||| ||| | |||||||| |||||||||||| | ||||| || |||||| Sbjct: 233 aggagtcggcggagctgaaggagattccggtggtgctaatgtcgtcggagaat 285
>ref|NM_001053677.1| Oryza sativa (japonica cultivar-group) Os02g0557800 (Os02g0557800) mRNA, complete cds Length = 1663 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 716 gactactgcatgccgggcatgacaggatacgatct 750 |||||||||||||||| ||||||||||||||||| Sbjct: 431 gactactgcatgccggagatgacaggatacgatct 465
>gb|AC144404.35| Medicago truncatula clone mth2-19f21, complete sequence Length = 132619 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Plus Query: 698 gtgaatttgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgag 756 |||||| ||||||| ||||| ||||| ||||| || |||||||| || ||||||||||| Sbjct: 92321 gtgaatctgatcataactgattactgtatgccaggaatgacaggctatgatctgctgag 92379
>dbj|AB249662.1| Oryza sativa (japonica cultivar-group) OsRR2 mRNA for typeA response regulator 2, complete cds Length = 759 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 716 gactactgcatgccgggcatgacaggatacgatct 750 |||||||||||||||| ||||||||||||||||| Sbjct: 268 gactactgcatgccggagatgacaggatacgatct 302
>emb|AJ938071.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 2 (rr2 gene) Length = 759 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 716 gactactgcatgccgggcatgacaggatacgatct 750 |||||||||||||||| ||||||||||||||||| Sbjct: 268 gactactgcatgccggagatgacaggatacgatct 302
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Minus Query: 716 gactactgcatgccgggcatgacaggatacgatct 750 |||||||||||||||| ||||||||||||||||| Sbjct: 21149862 gactactgcatgccggagatgacaggatacgatct 21149828 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Minus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||||||||| || ||||||||||||| |||||||| | |||||| || | |||||||| Sbjct: 35708358 tgatcatcacggattactgcatgccggagatgacagggttcgatctcctcaagagggtca 35708299 Query: 765 agg 767 ||| Sbjct: 35708298 agg 35708296 Score = 52.0 bits (26), Expect = 0.006 Identities = 41/46 (89%) Strand = Plus / Minus Query: 794 gtggtgatcatgtcctctgagaatgtgcctgccaggatcagcaggt 839 ||||||||||||||||| ||||||||||| | || |||||||||| Sbjct: 25305715 gtggtgatcatgtcctcggagaatgtgccaacaagaatcagcaggt 25305670 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1480 gctggccgccgcggcgcgcgcgccct 1505 |||||||||||| ||||||||||||| Sbjct: 20191628 gctggccgccgccgcgcgcgcgccct 20191603 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 cctcctcctcctccttccact 415 ||||||||||||||||||||| Sbjct: 12683185 cctcctcctcctccttccact 12683205
>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_D06 Length = 102239 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Minus Query: 705 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 764 |||||||||| || ||||||||||||| |||||||| | |||||| || | |||||||| Sbjct: 68972 tgatcatcacggattactgcatgccggagatgacagggttcgatctcctcaagagggtca 68913 Query: 765 agg 767 ||| Sbjct: 68912 agg 68910
>dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0038F20 Length = 129595 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Minus Query: 716 gactactgcatgccgggcatgacaggatacgatct 750 |||||||||||||||| ||||||||||||||||| Sbjct: 56578 gactactgcatgccggagatgacaggatacgatct 56544
>dbj|AK070645.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061L14, full insert sequence Length = 1666 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 716 gactactgcatgccgggcatgacaggatacgatct 750 |||||||||||||||| ||||||||||||||||| Sbjct: 434 gactactgcatgccggagatgacaggatacgatct 468
>dbj|AK069453.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020J18, full insert sequence Length = 1412 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 716 gactactgcatgccgggcatgacaggatacgatct 750 |||||||||||||||| ||||||||||||||||| Sbjct: 406 gactactgcatgccggagatgacaggatacgatct 440
>emb|CR855229.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0153E02-OSIGBa0093I20, complete sequence Length = 174064 Score = 52.0 bits (26), Expect = 0.006 Identities = 41/46 (89%) Strand = Plus / Plus Query: 835 caggtgcttggaggatggcgcggaggagttcttcctcaagcccgtg 880 ||||||||||||||| || |||||||| ||||| || ||||||||| Sbjct: 93477 caggtgcttggaggaaggagcggaggatttcttgctgaagcccgtg 93522 Score = 44.1 bits (22), Expect = 1.5 Identities = 34/38 (89%) Strand = Plus / Plus Query: 779 ctgaaggacattccggtggtgatcatgtcctctgagaa 816 |||||||| || || ||||||||||||||||| ||||| Sbjct: 93332 ctgaaggagatccctgtggtgatcatgtcctcggagaa 93369
>dbj|AK228970.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-27-H23 Length = 1046 Score = 52.0 bits (26), Expect = 0.006 Identities = 41/46 (89%) Strand = Plus / Plus Query: 702 atttgatcatcactgactactgcatgccgggcatgacaggatacga 747 |||||||||||||||| ||||| ||||| || ||||| |||||||| Sbjct: 344 atttgatcatcactgattactgtatgcctggaatgactggatacga 389
>ref|NM_104686.2| Arabidopsis thaliana ARR3 (RESPONSE REGULATOR 3); transcription regulator/ two-component response regulator (ARR3) mRNA, complete cds Length = 1051 Score = 52.0 bits (26), Expect = 0.006 Identities = 41/46 (89%) Strand = Plus / Plus Query: 702 atttgatcatcactgactactgcatgccgggcatgacaggatacga 747 |||||||||||||||| ||||| ||||| || ||||| |||||||| Sbjct: 344 atttgatcatcactgattactgtatgcctggaatgactggatacga 389
>gb|AC007258.3| Arabidopsis thaliana chromosome I BAC F23H11 genomic sequence, complete sequence Length = 144422 Score = 52.0 bits (26), Expect = 0.006 Identities = 41/46 (89%) Strand = Plus / Minus Query: 702 atttgatcatcactgactactgcatgccgggcatgacaggatacga 747 |||||||||||||||| ||||| ||||| || ||||| |||||||| Sbjct: 132325 atttgatcatcactgattactgtatgcctggaatgactggatacga 132280
>gb|BT024848.1| Arabidopsis thaliana At1g59940 gene, complete cds Length = 696 Score = 52.0 bits (26), Expect = 0.006 Identities = 41/46 (89%) Strand = Plus / Plus Query: 702 atttgatcatcactgactactgcatgccgggcatgacaggatacga 747 |||||||||||||||| ||||| ||||| || ||||| |||||||| Sbjct: 266 atttgatcatcactgattactgtatgcctggaatgactggatacga 311
>emb|AL663010.4|OSJN00211 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0065J09, complete sequence Length = 117443 Score = 52.0 bits (26), Expect = 0.006 Identities = 41/46 (89%) Strand = Plus / Plus Query: 835 caggtgcttggaggatggcgcggaggagttcttcctcaagcccgtg 880 ||||||||||||||| || |||||||| ||||| || ||||||||| Sbjct: 88612 caggtgcttggaggaaggagcggaggatttcttgctgaagcccgtg 88657 Score = 44.1 bits (22), Expect = 1.5 Identities = 34/38 (89%) Strand = Plus / Plus Query: 779 ctgaaggacattccggtggtgatcatgtcctctgagaa 816 |||||||| || || ||||||||||||||||| ||||| Sbjct: 88467 ctgaaggagatccctgtggtgatcatgtcctcggagaa 88504
>dbj|AP006452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1250G12 Length = 144590 Score = 52.0 bits (26), Expect = 0.006 Identities = 41/46 (89%) Strand = Plus / Minus Query: 794 gtggtgatcatgtcctctgagaatgtgcctgccaggatcagcaggt 839 ||||||||||||||||| ||||||||||| | || |||||||||| Sbjct: 72866 gtggtgatcatgtcctcggagaatgtgccaacaagaatcagcaggt 72821
>dbj|AB008486.1| Arabidopsis thaliana ARR3 mRNA for response regulator 3, complete cds Length = 1028 Score = 52.0 bits (26), Expect = 0.006 Identities = 41/46 (89%) Strand = Plus / Plus Query: 702 atttgatcatcactgactactgcatgccgggcatgacaggatacga 747 |||||||||||||||| ||||| ||||| || ||||| |||||||| Sbjct: 321 atttgatcatcactgattactgtatgcctggaatgactggatacga 366
>gb|AC189506.1| Brassica rapa subsp. pekinensis clone KBrB088E10, complete sequence Length = 102939 Score = 50.1 bits (25), Expect = 0.025 Identities = 34/37 (91%) Strand = Plus / Plus Query: 803 atgtcctctgagaatgtgcctgccaggatcagcaggt 839 |||||||||||||| || ||||| ||||||||||||| Sbjct: 70058 atgtcctctgagaacgttcctgcaaggatcagcaggt 70094
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 50.1 bits (25), Expect = 0.025 Identities = 25/25 (100%) Strand = Plus / Minus Query: 869 ctcaagcccgtgaagctcgccgaca 893 ||||||||||||||||||||||||| Sbjct: 2533697 ctcaagcccgtgaagctcgccgaca 2533673
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 50.1 bits (25), Expect = 0.025 Identities = 25/25 (100%) Strand = Plus / Minus Query: 869 ctcaagcccgtgaagctcgccgaca 893 ||||||||||||||||||||||||| Sbjct: 713742 ctcaagcccgtgaagctcgccgaca 713718
>gb|AC163280.2| Mus musculus BAC clone RP23-478G5 from chromosome 14, complete sequence Length = 202761 Score = 48.1 bits (24), Expect = 0.097 Identities = 30/32 (93%) Strand = Plus / Plus Query: 334 tctccctcaaatcctctcctcctctcccccac 365 |||||||| || |||||||||||||||||||| Sbjct: 141877 tctccctctaaacctctcctcctctcccccac 141908
>gb|AC154276.2| Mus musculus BAC clone RP24-260F19 from chromosome 14, complete sequence Length = 186529 Score = 48.1 bits (24), Expect = 0.097 Identities = 30/32 (93%) Strand = Plus / Minus Query: 334 tctccctcaaatcctctcctcctctcccccac 365 |||||||| || |||||||||||||||||||| Sbjct: 465 tctccctctaaacctctcctcctctcccccac 434
>emb|CT030647.17| Mouse DNA sequence from clone RP23-379I9 on chromosome 14, complete sequence Length = 205598 Score = 48.1 bits (24), Expect = 0.097 Identities = 30/32 (93%) Strand = Plus / Minus Query: 334 tctccctcaaatcctctcctcctctcccccac 365 |||||||| || |||||||||||||||||||| Sbjct: 178441 tctccctctaaacctctcctcctctcccccac 178410
>gb|DQ431689.1| Striga asiatica SRR198 mRNA, complete cds Length = 717 Score = 46.1 bits (23), Expect = 0.38 Identities = 38/43 (88%) Strand = Plus / Plus Query: 804 tgtcctctgagaatgtgcctgccaggatcagcaggtgcttgga 846 ||||||||||||||||||| | ||||||| ||| |||||||| Sbjct: 326 tgtcctctgagaatgtgccatcaaggatcaccagatgcttgga 368
>gb|AF534890.1| Catharanthus roseus type-A response regulator (RR3) mRNA, complete cds Length = 567 Score = 46.1 bits (23), Expect = 0.38 Identities = 140/179 (78%) Strand = Plus / Plus Query: 698 gtgaatttgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgagg 757 |||||| |||| |||||||| || | |||||| |||||||| || |||||||| || || Sbjct: 205 gtgaatctgattatcactgattattccatgcccggcatgaccggctacgatcttctcaga 264 Query: 758 agggtcaaggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaat 817 | || |||| ||||| | |||||||||| || || || || ||||||||||||||| Sbjct: 265 aaagtgaaggaatcatcatacttgaaggacatcccagtagtaataatgtcctctgagaat 324 Query: 818 gtgcctgccaggatcagcaggtgcttggaggatggcgcggaggagttcttcctcaagcc 876 | ||| | || |||| ||| ||||| || || || || || || |||||||||||||| Sbjct: 325 attccttcaagaatcaacagatgcttagaagaaggagctgatgatttcttcctcaagcc 383
>emb|CR936838.15| Mouse DNA sequence from clone DN-127N6 on chromosome 3, complete sequence Length = 174972 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 393 tccctcctcctcctccttccact 415 ||||||||||||||||||||||| Sbjct: 148508 tccctcctcctcctccttccact 148486
>gb|AC164541.3| Mus musculus chromosome 1, clone RP24-172N7, complete sequence Length = 161969 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 395 cctcctcctcctccttccactct 417 ||||||||||||||||||||||| Sbjct: 53639 cctcctcctcctccttccactct 53661
>gb|AC105073.16| Mus musculus chromosome 1, clone RP23-288J11, complete sequence Length = 210509 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 395 cctcctcctcctccttccactct 417 ||||||||||||||||||||||| Sbjct: 32265 cctcctcctcctccttccactct 32243
>emb|AL731716.10| Mouse DNA sequence from clone RP23-130L10 on chromosome 3, complete sequence Length = 49105 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 393 tccctcctcctcctccttccact 415 ||||||||||||||||||||||| Sbjct: 36835 tccctcctcctcctccttccact 36813
>ref|XM_001221792.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_05698) mRNA, complete cds Length = 3432 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 cctcaaacccaccaccaccacc 62 |||||||||||||||||||||| Sbjct: 2008 cctcaaacccaccaccaccacc 1987
>dbj|AK231807.1| Sus scrofa mRNA, clone:LNG010026B01, expressed in lung Length = 1168 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 396 ctcctcctcctccttccactctgcct 421 ||||||||||| |||||||||||||| Sbjct: 554 ctcctcctccttcttccactctgcct 529
>ref|NM_001053607.1| Oryza sativa (japonica cultivar-group) Os02g0543100 (Os02g0543100) mRNA, complete cds Length = 1467 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1480 gctggccgccgcggcgcgcgcgccct 1505 |||||||||||| ||||||||||||| Sbjct: 195 gctggccgccgccgcgcgcgcgccct 220
>gb|AC119911.10| Mus musculus chromosome 1, clone RP24-242P4, complete sequence Length = 175107 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1425 gagcaggggaggggaaaggaag 1446 |||||||||||||||||||||| Sbjct: 174317 gagcaggggaggggaaaggaag 174338
>gb|AC130544.3| Mus musculus BAC clone RP24-209I17 from chromosome 19, complete sequence Length = 166863 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 ttccaaagccaaagaagagagc 35 |||||||||||||||||||||| Sbjct: 150312 ttccaaagccaaagaagagagc 150333
>gb|AC098878.3| Mus musculus BAC clone RP23-2G23 from 4, complete sequence Length = 209021 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 395 cctcctcctcctccttccactc 416 |||||||||||||||||||||| Sbjct: 183669 cctcctcctcctccttccactc 183648
>gb|AC166100.2| Mus musculus BAC clone RP24-64H18 from chromosome 19, complete sequence Length = 275852 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 ttccaaagccaaagaagagagc 35 |||||||||||||||||||||| Sbjct: 122429 ttccaaagccaaagaagagagc 122450
>gb|AC175203.2| Sporobolomyces roseus clone JGIBAIF-5E21, complete sequence Length = 35046 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 388 agatttccctcctcctcctcct 409 |||||||||||||||||||||| Sbjct: 14099 agatttccctcctcctcctcct 14078
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 1.5 Identities = 43/50 (86%) Strand = Plus / Plus Query: 791 ccggtggtgatcatgtcctctgagaatgtgcctgccaggatcagcaggtg 840 ||||||||||| ||||| || ||||| ||||| | |||||||||||||| Sbjct: 15388352 ccggtggtgataatgtcgtcagagaacgtgcccacaaggatcagcaggtg 15388401 Score = 42.1 bits (21), Expect = 6.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 839 tgcttggaggatggcgcggaggagttcttcctcaagcccgt 879 |||||||| || ||||||||||| ||| | ||||||||||| Sbjct: 15388515 tgcttggaagaaggcgcggaggacttcctgctcaagcccgt 15388555
>emb|AL353631.17| Human DNA sequence from clone RP11-5N16 on chromosome 9 Contains the 5' end of the gene for netrin G2 protein (KIAA1857) and three CpG islands, complete sequence Length = 97112 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 391 tttccctcctcctcctccttccactc 416 ||||||||||||||||||| |||||| Sbjct: 69098 tttccctcctcctcctcctcccactc 69073
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1480 gctggccgccgcggcgcgcgcg 1501 |||||||||||||||||||||| Sbjct: 2268271 gctggccgccgcggcgcgcgcg 2268292 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1484 gccgccgcggcgcgcgcgccc 1504 ||||||||||||||||||||| Sbjct: 1083793 gccgccgcggcgcgcgcgccc 1083813
>emb|AL844848.12| Mouse DNA sequence from clone RP23-247N5 on chromosome 4 Contains part of the Ptprd gene for receptor type protein tyrosine phosphatase D and a CpG island, complete sequence Length = 199012 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 395 cctcctcctcctccttccactc 416 |||||||||||||||||||||| Sbjct: 141026 cctcctcctcctccttccactc 141005
>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_A06 Length = 111673 Score = 44.1 bits (22), Expect = 1.5 Identities = 43/50 (86%) Strand = Plus / Plus Query: 791 ccggtggtgatcatgtcctctgagaatgtgcctgccaggatcagcaggtg 840 ||||||||||| ||||| || ||||| ||||| | |||||||||||||| Sbjct: 95351 ccggtggtgataatgtcgtcagagaacgtgcccacaaggatcagcaggtg 95400 Score = 42.1 bits (21), Expect = 6.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 839 tgcttggaggatggcgcggaggagttcttcctcaagcccgt 879 |||||||| || ||||||||||| ||| | ||||||||||| Sbjct: 95514 tgcttggaagaaggcgcggaggacttcctgctcaagcccgt 95554
>dbj|AP004877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0472F10 Length = 136076 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1480 gctggccgccgcggcgcgcgcgccct 1505 |||||||||||| ||||||||||||| Sbjct: 64934 gctggccgccgccgcgcgcgcgccct 64909
>emb|AL117692.5|CNS01DRP Human chromosome 14 DNA sequence BAC R-58E21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 168874 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 434 tggctcttcttcctgcctggac 455 |||||||||||||||||||||| Sbjct: 143796 tggctcttcttcctgcctggac 143775
>gb|AY609772.1| Sus scrofa clone Clu_30504.scr.msk.p1.Contig1, mRNA sequence Length = 1133 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 396 ctcctcctcctccttccactctgcct 421 ||||||||||| |||||||||||||| Sbjct: 520 ctcctcctccttcttccactctgcct 495
>emb|AL928706.6| Mouse DNA sequence from clone RP23-54E16 on chromosome 2, complete sequence Length = 205358 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 391 tttccctcctcctcctccttcc 412 |||||||||||||||||||||| Sbjct: 18640 tttccctcctcctcctccttcc 18619
>emb|AL807771.6| Mouse DNA sequence from clone RP23-141C15 on chromosome 4, complete sequence Length = 233077 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 390 atttccctcctcctcctccttc 411 |||||||||||||||||||||| Sbjct: 75379 atttccctcctcctcctccttc 75400
>gb|AC117673.18| Mus musculus chromosome 1, clone RP23-390I1, complete sequence Length = 182102 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1425 gagcaggggaggggaaaggaag 1446 |||||||||||||||||||||| Sbjct: 121211 gagcaggggaggggaaaggaag 121190
>ref|XM_415090.2| PREDICTED: Gallus gallus hypothetical LOC416799 (LOC416799), mRNA Length = 2863 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 ctcctcctcctccttccactc 416 ||||||||||||||||||||| Sbjct: 1041 ctcctcctcctccttccactc 1021
>ref|XM_425050.2| PREDICTED: Gallus gallus similar to hyperpolarization-activated cyclic nucleotide gated cation channel hHCN4 (LOC427478), mRNA Length = 3567 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1173 gcggcggcagcagcagcctgg 1193 ||||||||||||||||||||| Sbjct: 2219 gcggcggcagcagcagcctgg 2199
>emb|CT030159.11| Mouse DNA sequence from clone RP24-145F3 on chromosome 13, complete sequence Length = 203647 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 ttccctcctcctcctccttcc 412 ||||||||||||||||||||| Sbjct: 142361 ttccctcctcctcctccttcc 142341
>dbj|AK232553.1| Sus scrofa mRNA, clone:LVR010071B05, expressed in liver Length = 1142 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1170 ccagcggcggcagcagcagcc 1190 ||||||||||||||||||||| Sbjct: 260 ccagcggcggcagcagcagcc 280
>emb|CU012066.3| Wallaby DNA sequence from clone MEKBa-107A11, complete sequence Length = 159867 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tttccctcctcctcctccttc 411 ||||||||||||||||||||| Sbjct: 30967 tttccctcctcctcctccttc 30987
>ref|XM_518756.2| PREDICTED: Pan troglodytes v-myb myeloblastosis viral oncogene homolog (MYB), mRNA Length = 4801 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gatttccctcctcctcctcct 409 ||||||||||||||||||||| Sbjct: 369 gatttccctcctcctcctcct 349
>gb|CP000453.1| Alkalilimnicola ehrlichei MLHE-1, complete genome Length = 3275944 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1160 gcgagcctctccagcggcggcagca 1184 |||||||||||| |||||||||||| Sbjct: 926024 gcgagcctctccggcggcggcagca 926000
>gb|AC171816.4| Rhesus Macaque BAC CH250-408H21 () complete sequence Length = 167066 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1222 aaccaagaaacctcatgtttc 1242 ||||||||||||||||||||| Sbjct: 80862 aaccaagaaacctcatgtttc 80882
>dbj|AK226322.1| Arabidopsis thaliana mRNA for putative response regulator 3, complete cds, clone: RAFL05-13-J02 Length = 1004 Score = 42.1 bits (21), Expect = 6.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 702 atttgatcatcactgactactgcatgccgggcatgac 738 |||||||||||||||| ||||| ||||| || ||||| Sbjct: 329 atttgatcatcactgattactgtatgcctggaatgac 365
>emb|CR381703.9| Zebrafish DNA sequence from clone DKEY-72P23 in linkage group 7, complete sequence Length = 28824 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 881 aagctcgccgacatgaagaag 901 ||||||||||||||||||||| Sbjct: 14277 aagctcgccgacatgaagaag 14257
>gb|DQ513200.1| Populus trichocarpa clone 205099 TIR-NBS-LRR type disease resistance protein mRNA, complete cds Length = 3849 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1168 ctccagcggcggcagcagcag 1188 ||||||||||||||||||||| Sbjct: 3742 ctccagcggcggcagcagcag 3762
>gb|AC187101.1| Pongo pygmaeus abelii chromosome UNK clone CH276-37H12, complete sequence Length = 104009 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 ttccctcctcctcctccttcc 412 ||||||||||||||||||||| Sbjct: 74516 ttccctcctcctcctccttcc 74536
>ref|NM_104929.2| Arabidopsis thaliana lipid binding (AT1G62500) mRNA, complete cds Length = 1458 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gatttccctcctcctcctcct 409 ||||||||||||||||||||| Sbjct: 399 gatttccctcctcctcctcct 379
>ref|NM_100921.2| Arabidopsis thaliana ARR4 (RESPONSE REGULATOR 4); transcription regulator/ two-component response regulator (ARR4) mRNA, complete cds Length = 1275 Score = 42.1 bits (21), Expect = 6.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 702 atttgatcatcactgactactgcatgccgggcatgac 738 |||||||||||||||| ||||| ||||| || ||||| Sbjct: 467 atttgatcatcactgattactgtatgcctggaatgac 503
>gb|AC135667.5| Mus musculus BAC clone RP24-536G18 from chromosome 13, complete sequence Length = 166185 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 ttccctcctcctcctccttcc 412 ||||||||||||||||||||| Sbjct: 56484 ttccctcctcctcctccttcc 56504
>gb|AC153645.4| Mus musculus BAC clone RP24-534E8 from chromosome 13, complete sequence Length = 182805 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 ttccctcctcctcctccttcc 412 ||||||||||||||||||||| Sbjct: 170330 ttccctcctcctcctccttcc 170350
>gb|AC167185.4| Mus musculus chromosome 3, clone RP23-355G8, complete sequence Length = 213731 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tttccctcctcctcctccttc 411 ||||||||||||||||||||| Sbjct: 157722 tttccctcctcctcctccttc 157742
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 498 tggcggtggacgacagcgtca 518 ||||||||||||||||||||| Sbjct: 4077426 tggcggtggacgacagcgtca 4077446
>gb|AE008971.1| Agrobacterium tumefaciens str. C58 AT plasmid section 46 of 49 of the complete sequence Length = 10260 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 710 atcactgactactgcatgccgggcatgac 738 ||||||||||| | ||||||||||||||| Sbjct: 5922 atcactgactattccatgccgggcatgac 5894
>gb|AC120359.8| Mus musculus chromosome 5, clone RP24-285E7, complete sequence Length = 141594 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 cctcaaatcctctcctcctct 358 ||||||||||||||||||||| Sbjct: 29629 cctcaaatcctctcctcctct 29649
>ref|XM_588871.2| PREDICTED: Bos taurus similar to HIRA interacting protein 3 (LOC539704), mRNA Length = 2214 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 tttccctcctcctcctccttc 411 ||||||||||||||||||||| Sbjct: 755 tttccctcctcctcctccttc 735
>gb|AC079277.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-65N7, complete sequence Length = 190328 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 ctcctcctcctccttccactc 416 ||||||||||||||||||||| Sbjct: 147086 ctcctcctcctccttccactc 147066
>gb|AE007919.1| Agrobacterium tumefaciens str. C58 plasmid AT, section 47 of 50 of the complete sequence Length = 10329 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 710 atcactgactactgcatgccgggcatgac 738 ||||||||||| | ||||||||||||||| Sbjct: 5991 atcactgactattccatgccgggcatgac 5963
>gb|AC102312.11| Mus musculus chromosome 10, clone RP24-428L4, complete sequence Length = 182940 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 cctcctcctcctccttccact 415 ||||||||||||||||||||| Sbjct: 5317 cctcctcctcctccttccact 5337
>gb|AC163285.3| Mus musculus BAC clone RP23-379H2 from chromosome 16, complete sequence Length = 184951 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 393 tccctcctcctcctccttccactct 417 |||||||||||||||||| |||||| Sbjct: 15783 tccctcctcctcctcctttcactct 15759
>gb|AC122746.7| Mus musculus chromosome 17, clone RP23-144A20, complete sequence Length = 218858 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 ccctcctcctcctccttccac 414 ||||||||||||||||||||| Sbjct: 35128 ccctcctcctcctccttccac 35148
>gb|AC137108.12| Mus musculus chromosome 9, clone RP23-277J20, complete sequence Length = 204108 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tccctcctcctcctccttcca 413 ||||||||||||||||||||| Sbjct: 48865 tccctcctcctcctccttcca 48845
>gb|AC130969.4| Rattus norvegicus 2 BAC CH230-105B13 (Children's Hospital Oakland Research Institute) complete sequence Length = 238254 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 796 ggtgatcatgtcctctgagaa 816 ||||||||||||||||||||| Sbjct: 118936 ggtgatcatgtcctctgagaa 118956
>gb|AC127560.4| Mus musculus BAC clone RP24-267I18 from chromosome 5, complete sequence Length = 186768 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 tttccctcctcctcctccttc 411 ||||||||||||||||||||| Sbjct: 16379 tttccctcctcctcctccttc 16359
>gb|AC125150.3| Mus musculus BAC clone RP24-354K9 from chromosome 19, complete sequence Length = 154390 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 393 tccctcctcctcctccttccactct 417 |||||||||||||||||||| |||| Sbjct: 45607 tccctcctcctcctccttcctctct 45631
>gb|AC122537.4| Mus musculus BAC clone RP24-548A15 from chromosome 7, complete sequence Length = 195987 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 tttccctcctcctcctccttc 411 ||||||||||||||||||||| Sbjct: 137220 tttccctcctcctcctccttc 137200
>gb|AC121774.3| Mus musculus BAC clone RP23-350E1 from chromosome 5, complete sequence Length = 191733 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 cctcaaatcctctcctcctct 358 ||||||||||||||||||||| Sbjct: 12521 cctcaaatcctctcctcctct 12501
>gb|AC124178.3| Mus musculus BAC clone RP23-193J15 from 18, complete sequence Length = 206833 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tttccctcctcctcctccttc 411 ||||||||||||||||||||| Sbjct: 195107 tttccctcctcctcctccttc 195127
>gb|AC118632.7| Mus musculus chromosome 18, clone RP24-94D24, complete sequence Length = 198636 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 cctcctcctcctccttccact 415 ||||||||||||||||||||| Sbjct: 48525 cctcctcctcctccttccact 48545
>gb|AC102375.8| Mus musculus chromosome 3, clone RP23-281M6, complete sequence Length = 149467 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 tttccctcctcctcctccttc 411 ||||||||||||||||||||| Sbjct: 131081 tttccctcctcctcctccttc 131061
>dbj|AK126639.1| Homo sapiens cDNA FLJ44681 fis, clone BRACE3010086, moderately similar to Homo sapiens chondroitin sulfate proteoglycan 3 (neurocan) (CSPG3) Length = 4481 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 ttccctcctcctcctccttccactc 416 |||||||| |||||||||||||||| Sbjct: 1001 ttccctccccctcctccttccactc 1025
>gb|AC161518.3| Mus musculus chromosome 19, clone RP24-232M2, complete sequence Length = 176356 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 393 tccctcctcctcctccttccactct 417 |||||||||||||||||||| |||| Sbjct: 166973 tccctcctcctcctccttcctctct 166949
>gb|BC114062.1| Bos taurus cDNA clone MGC:137539 IMAGE:8161659, complete cds Length = 1626 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1170 ccagcggcggcagcagcagcc 1190 ||||||||||||||||||||| Sbjct: 271 ccagcggcggcagcagcagcc 291
>gb|AY079346.1| Arabidopsis thaliana putative proline-rich cell wall protein (At1g62500) mRNA, complete cds Length = 925 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gatttccctcctcctcctcct 409 ||||||||||||||||||||| Sbjct: 263 gatttccctcctcctcctcct 243
>gb|AY045962.1| Arabidopsis thaliana putative proline-rich cell wall protein (At1g62500) mRNA, complete cds Length = 1068 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gatttccctcctcctcctcct 409 ||||||||||||||||||||| Sbjct: 272 gatttccctcctcctcctcct 252
>gb|AC161470.3| Gallus gallus BAC clone CH261-85J8 from chromosome ul, complete sequence Length = 213142 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1171 cagcggcggcagcagcagcct 1191 ||||||||||||||||||||| Sbjct: 163661 cagcggcggcagcagcagcct 163641
>gb|AC091564.12| Homo sapiens chromosome 11, clone RP11-732A19, complete sequence Length = 211735 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tttccctcctcctcctccttc 411 ||||||||||||||||||||| Sbjct: 64241 tttccctcctcctcctccttc 64261
>gb|AC117419.5| Homo sapiens 3 BAC RP11-138C11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 63032 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 393 tccctcctcctcctccttccactct 417 |||||||||||||||||||| |||| Sbjct: 41557 tccctcctcctcctccttcctctct 41581
>gb|AC131374.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0008A05, complete sequence Length = 124366 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 523 ccggaagctcatcgagatgctgctc 547 ||||||||||||| ||||||||||| Sbjct: 105483 ccggaagctcatcaagatgctgctc 105459
>gb|BT024478.1| Arabidopsis thaliana At1g10470 mRNA, complete cds Length = 780 Score = 42.1 bits (21), Expect = 6.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 702 atttgatcatcactgactactgcatgccgggcatgac 738 |||||||||||||||| ||||| ||||| || ||||| Sbjct: 269 atttgatcatcactgattactgtatgcctggaatgac 305
>ref|XM_752248.1| Ustilago maydis 521 hypothetical protein (UM01194.1) partial mRNA Length = 1791 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1169 tccagcggcggcagcagcagc 1189 ||||||||||||||||||||| Sbjct: 271 tccagcggcggcagcagcagc 291
>gb|AC016644.9| Homo sapiens chromosome 5 clone RP11-52M14, complete sequence Length = 157751 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1222 aaccaagaaacctcatgtttc 1242 ||||||||||||||||||||| Sbjct: 122642 aaccaagaaacctcatgtttc 122622
>ref|XM_745054.1| Aspergillus fumigatus Af293 mitochondrial translation initiation factor IF-2 (Afu1g03970) partial mRNA Length = 3207 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1171 cagcggcggcagcagcagcct 1191 ||||||||||||||||||||| Sbjct: 1090 cagcggcggcagcagcagcct 1070
>gb|AC022023.7| Homo sapiens chromosome 10 clone RP11-411P18, complete sequence Length = 160420 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 cgaggaggtaaaggaggggaa 116 ||||||||||||||||||||| Sbjct: 152795 cgaggaggtaaaggaggggaa 152815
>gb|AC016825.12| Homo sapiens chromosome 10 clone RP11-498B4, complete sequence Length = 198261 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 tttccctcctcctcctccttc 411 ||||||||||||||||||||| Sbjct: 164091 tttccctcctcctcctccttc 164071
>emb|X63054.1|HSCMYBI1T H.sapiens DNA for transcriptional block in c-myb, intron 1 Length = 4278 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gatttccctcctcctcctcct 409 ||||||||||||||||||||| Sbjct: 706 gatttccctcctcctcctcct 686
>gb|AC036101.6| Homo sapiens chromosome 10 clone RP11-71J2, complete sequence Length = 175492 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 810 ctgagaatgtgcctgccagga 830 ||||||||||||||||||||| Sbjct: 124827 ctgagaatgtgcctgccagga 124847
>emb|CR690030.3|CNS0FVDM Tetraodon nigroviridis full-length cDNA Length = 1069 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1173 gcggcggcagcagcagcctgg 1193 ||||||||||||||||||||| Sbjct: 149 gcggcggcagcagcagcctgg 129
>gb|AC099552.6| Homo sapiens BAC clone RP11-1430O6 from 7, complete sequence Length = 165873 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 ttccctcctcctcctccttcc 412 ||||||||||||||||||||| Sbjct: 147049 ttccctcctcctcctccttcc 147069 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 ttccctcctcctcctccttcc 412 ||||||||||||||||||||| Sbjct: 147066 ttccctcctcctcctccttcc 147086 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 ttccctcctcctcctccttcc 412 ||||||||||||||||||||| Sbjct: 147083 ttccctcctcctcctccttcc 147103
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 523 ccggaagctcatcgagatgctgctc 547 ||||||||||||| ||||||||||| Sbjct: 8900876 ccggaagctcatcaagatgctgctc 8900852
>emb|CR855377.7| Zebrafish DNA sequence from clone DKEY-263F15 in linkage group 8, complete sequence Length = 107728 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gatttccctcctcctcctcct 409 ||||||||||||||||||||| Sbjct: 13163 gatttccctcctcctcctcct 13143
>gb|AC024094.28| Homo sapiens 4 RP11-193M13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161973 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 ctctcctcaaacccaccaccaccac 61 |||||||||| |||||||||||||| Sbjct: 59958 ctctcctcaaccccaccaccaccac 59982
>emb|AL683807.22| Human DNA sequence from clone RP13-297E16 on chromosome X Contains the DXYS155E gene for DNA segment on chromosome X and Y (unique) 155 expressed sequence (XE7, XE7Y), the ASMT gene for acetylserotonin O-methyltransferase (ASMTY, HIOMT, HIOMTY), three novel genes and three CpG islands, complete sequence Length = 189825 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 ttccctcctcctcctccttcc 412 ||||||||||||||||||||| Sbjct: 152653 ttccctcctcctcctccttcc 152673
>emb|AL365494.17| Human DNA sequence from clone RP11-317B10 on chromosome 9 Contains the 3' end of the SARDH gene for sarcosine dehydrogenase (SAR, SDH, SARD, DMGDHL1), the DBH gene for dopamine beta-hydroxylase (dopamine beta-monooxygenase) and a novel gene, complete sequence Length = 53242 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 393 tccctcctcctcctccttccactct 417 |||||||||||||||||||| |||| Sbjct: 41132 tccctcctcctcctccttcctctct 41156
>emb|AL354919.16| Human DNA sequence from clone RP11-84A19 on chromosome 1 Contains the 5' end of the BAI2 gene for brain-specific angiogenesis inhibitor 2, the gene for a novel protein (FLJ33697, FLJ25348, FLJ39908, FLJ25348, FLJ38510, FLJ38873), a novel gene (FLJ46627) and three CpG islands, complete sequence Length = 124413 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 tttccctcctcctcctccttc 411 ||||||||||||||||||||| Sbjct: 56272 tttccctcctcctcctccttc 56252
>emb|AL139288.15| Human DNA sequence from clone RP5-915N17 on chromosome 1q42.11-42.3, complete sequence Length = 151563 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 ttccctcctcctcctccttcc 412 ||||||||||||||||||||| Sbjct: 40439 ttccctcctcctcctccttcc 40419
>gb|AC161247.2| Mus musculus BAC clone RP24-447J22 from chromosome 12, complete sequence Length = 159391 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 ttccctcctcctcctccttcc 412 ||||||||||||||||||||| Sbjct: 36036 ttccctcctcctcctccttcc 36016
>emb|AL133274.8| Human DNA sequence from clone RP13-94P8 on chromosome X Contains part of the PCDH11X gene for protocadherin 11 X-linked, complete sequence Length = 96062 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 392 ttccctcctcctcctccttccactc 416 |||||||||||||||||| |||||| Sbjct: 55903 ttccctcctcctcctcctcccactc 55879
>emb|AL078602.14|HSJ360M22 Human DNA sequence from clone RP3-360M22 on chromosome 6q26-27 Contains a CpG island, complete sequence Length = 152129 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 829 gatcagcaggtgcttggagga 849 ||||||||||||||||||||| Sbjct: 53134 gatcagcaggtgcttggagga 53154
>emb|AL023693.25|HS32B1 Human DNA sequence from clone RP1-32B1 on chromosome 6q22.33-23.3 Contains the MYB gene for v-myb myeloblastosis viral oncogene homolog (avian), 2 novel genes, the 3' end of a novel protein and a CpG island, complete sequence Length = 188287 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gatttccctcctcctcctcct 409 ||||||||||||||||||||| Sbjct: 69634 gatttccctcctcctcctcct 69614
>gb|AC008937.7| Homo sapiens chromosome 5 clone CTD-2310F14, complete sequence Length = 171480 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1222 aaccaagaaacctcatgtttc 1242 ||||||||||||||||||||| Sbjct: 81572 aaccaagaaacctcatgtttc 81552
>gb|AC158573.5| Mus musculus chromosome 8, clone RP23-101F17, complete sequence Length = 204567 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tttccctcctcctcctccttc 411 ||||||||||||||||||||| Sbjct: 20260 tttccctcctcctcctccttc 20280
>gb|AC008902.5| Homo sapiens chromosome 5 clone CTD-2249G23, complete sequence Length = 101352 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1420 ggaatgagcaggggaggggaaagga 1444 ||||| ||||||||||||||||||| Sbjct: 30305 ggaataagcaggggaggggaaagga 30281
>gb|AY087579.1| Arabidopsis thaliana clone 36784 mRNA, complete sequence Length = 1134 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gatttccctcctcctcctcct 409 ||||||||||||||||||||| Sbjct: 316 gatttccctcctcctcctcct 296
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1176 gcggcagcagcagcctggcgg 1196 ||||||||||||||||||||| Sbjct: 3012964 gcggcagcagcagcctggcgg 3012944
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 869 ctcaagcccgtgaagctcgccgaca 893 |||| |||||||||||||||||||| Sbjct: 444624 ctcacgcccgtgaagctcgccgaca 444600
>gb|AC010339.8|AC010339 Homo sapiens chromosome 5 clone CTD-2009A17, complete sequence Length = 122480 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 tcctctcctcctctcccccac 365 ||||||||||||||||||||| Sbjct: 81460 tcctctcctcctctcccccac 81440
>emb|AJ309022.1|GFL309022 Grapevine fleck virus complete genome, isolate MT48, genomic RNA Length = 7564 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tttccctcctcctcctccttc 411 ||||||||||||||||||||| Sbjct: 7482 tttccctcctcctcctccttc 7502
>emb|AL929155.4| Zebrafish DNA sequence from clone DKEY-265M8 in linkage group 7 Contains a novel gene similar to mouse and human MRPL46 (mitochondrial ribosomal protein L46), a novel gene similar to mouse and human MRPS11 (mitochondrial ribosomal protein S11) and four CpG islands, complete sequence Length = 173326 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 881 aagctcgccgacatgaagaag 901 ||||||||||||||||||||| Sbjct: 60986 aagctcgccgacatgaagaag 61006
>gb|AC109614.9| Mus musculus chromosome 5, clone RP23-107M21, complete sequence Length = 194308 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 ctcaaacccaccaccaccacc 62 ||||||||||||||||||||| Sbjct: 141414 ctcaaacccaccaccaccacc 141394
>gb|AC005805.12| Homo sapiens 12 PAC RP3-473L9 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 113064 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 ttccctcctcctcctccttcc 412 ||||||||||||||||||||| Sbjct: 2783 ttccctcctcctcctccttcc 2803
>gb|AC007223.5| Homo sapiens chromosome 16 clone RP11-468I15, complete sequence Length = 159520 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 ttccctcctcctcctccttcc 412 ||||||||||||||||||||| Sbjct: 81858 ttccctcctcctcctccttcc 81838
>dbj|AB010915.1| Arabidopsis thaliana mRNA for responce regulator1, complete cds Length = 1227 Score = 42.1 bits (21), Expect = 6.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 702 atttgatcatcactgactactgcatgccgggcatgac 738 |||||||||||||||| ||||| ||||| || ||||| Sbjct: 467 atttgatcatcactgattactgtatgcctggaatgac 503
>gb|AC138430.2| Homo sapiens chromosome 19 clone LLNLR-259H9, complete sequence Length = 43185 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 392 ttccctcctcctcctccttccactc 416 |||||||| |||||||||||||||| Sbjct: 25896 ttccctccccctcctccttccactc 25872
>gb|AC005698.1|AC005698 Genomic sequence for Arabidopsis thaliana BAC T3P18 from Chromosome 1, complete sequence Length = 97054 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gatttccctcctcctcctcct 409 ||||||||||||||||||||| Sbjct: 23431 gatttccctcctcctcctcct 23411
>dbj|AP005651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0086N11 Length = 146185 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 cctcctcctcctccttccact 415 ||||||||||||||||||||| Sbjct: 31462 cctcctcctcctccttccact 31482
>dbj|AP004024.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1134_B09 Length = 105247 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 cctcctcctcctccttccact 415 ||||||||||||||||||||| Sbjct: 80244 cctcctcctcctccttccact 80264
>gb|AC116910.11| Homo sapiens chromosome 17, clone CTD-2573C9, complete sequence Length = 149156 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 ttccctcctcctcctccttcc 412 ||||||||||||||||||||| Sbjct: 131633 ttccctcctcctcctccttcc 131653
>dbj|BS000050.1| Pan troglodytes chromosome 22 clone:RP43-038C12, map 22, complete sequences Length = 202014 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1429 aggggaggggaaaggaaggttgaaa 1453 ||||||||||||||||||| ||||| Sbjct: 111227 aggggaggggaaaggaaggatgaaa 111203
>dbj|AB113202.1| Aotus trivirgatus Aotr-G2 gene for MHC class I antigen, complete cds Length = 2921 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 gaggtaaaggaggggaaatca 120 ||||||||||||||||||||| Sbjct: 1206 gaggtaaaggaggggaaatca 1226
>gb|AC007067.4|AC007067 Genomic sequence for Arabidopsis thaliana BAC T10O24 from Chromosome 1, complete sequence Length = 89934 Score = 42.1 bits (21), Expect = 6.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 702 atttgatcatcactgactactgcatgccgggcatgac 738 |||||||||||||||| ||||| ||||| || ||||| Sbjct: 24402 atttgatcatcactgattactgtatgcctggaatgac 24366
>emb|BX817837.1|CNS0ACFZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZB06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 883 Score = 42.1 bits (21), Expect = 6.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 702 atttgatcatcactgactactgcatgccgggcatgac 738 |||||||||||||||| ||||| ||||| || ||||| Sbjct: 301 atttgatcatcactgattactgtatgcctggaatgac 337
>emb|BX817831.1|CNS0ACG5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL43ZH11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 979 Score = 42.1 bits (21), Expect = 6.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 702 atttgatcatcactgactactgcatgccgggcatgac 738 |||||||||||||||| ||||| ||||| || ||||| Sbjct: 348 atttgatcatcactgattactgtatgcctggaatgac 384
>gb|AC163725.4| Pan troglodytes BAC clone CH251-612A20 from chromosome unknown, complete sequence Length = 179999 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1222 aaccaagaaacctcatgtttc 1242 ||||||||||||||||||||| Sbjct: 86083 aaccaagaaacctcatgtttc 86063
>gb|AC110171.29| Mus musculus chromosome 12, clone RP23-400A5, complete sequence Length = 188590 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 cctcctcctcctccttccact 415 ||||||||||||||||||||| Sbjct: 115352 cctcctcctcctccttccact 115332
>dbj|AP001675.1| Homo sapiens genomic DNA, chromosome 21q, section 19/105 Length = 340000 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1429 aggggaggggaaaggaaggttgaaa 1453 ||||||||||||||||||| ||||| Sbjct: 237599 aggggaggggaaaggaaggatgaaa 237575
>dbj|AP003035.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-482L11, complete sequence Length = 170638 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 393 tccctcctcctcctccttccactct 417 |||||||||||| |||||||||||| Sbjct: 99813 tccctcctcctcttccttccactct 99837
>gb|AC005660.3|AC005660 citb_163_g_10, complete sequence Length = 112652 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tttccctcctcctcctccttc 411 ||||||||||||||||||||| Sbjct: 49418 tttccctcctcctcctccttc 49438
>gb|AC112948.12| Mus musculus chromosome 8, clone RP23-299I18, complete sequence Length = 197546 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 tttccctcctcctcctccttc 411 ||||||||||||||||||||| Sbjct: 82372 tttccctcctcctcctccttc 82352
>gb|AF170550.1|AF170550 Arabidopsis thaliana germin-like protein 7 (GLP7) gene, complete cds Length = 5437 Score = 42.1 bits (21), Expect = 6.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 702 atttgatcatcactgactactgcatgccgggcatgac 738 |||||||||||||||| ||||| ||||| || ||||| Sbjct: 109 atttgatcatcactgattactgtatgcctggaatgac 145
>gb|BC089912.1| Rattus norvegicus cDNA clone IMAGE:7304849 Length = 1195 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 796 ggtgatcatgtcctctgagaa 816 ||||||||||||||||||||| Sbjct: 167 ggtgatcatgtcctctgagaa 147
>emb|AL929524.16| Mouse DNA sequence from clone RP23-440D4 on chromosome 4, complete sequence Length = 159107 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tttccctcctcctcctccttc 411 ||||||||||||||||||||| Sbjct: 130263 tttccctcctcctcctccttc 130283
>gb|AC154179.1| Mus musculus BAC clone RP23-468C22 from 16, complete sequence Length = 183622 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 393 tccctcctcctcctccttccactct 417 |||||||||||||||||| |||||| Sbjct: 57291 tccctcctcctcctcctttcactct 57315
>gb|AF057282.1|AF057282 Arabidopsis thaliana two-component response regulator homolog (IBC7) mRNA, complete cds Length = 1056 Score = 42.1 bits (21), Expect = 6.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 702 atttgatcatcactgactactgcatgccgggcatgac 738 |||||||||||||||| ||||| ||||| || ||||| Sbjct: 344 atttgatcatcactgattactgtatgcctggaatgac 380
>gb|AC005254.1|AC005254 Homo sapiens chromosome 19, long range PCR product from cosmid R29861, complete sequence Length = 20988 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 ttccctcctcctcctccttccactc 416 |||||||| |||||||||||||||| Sbjct: 6353 ttccctccccctcctccttccactc 6377
>emb|AL355543.13| Human DNA sequence from clone RP11-86E10 on chromosome 10 Contains the ADRB1 gene for adrenergic beta-1- receptor, a ubiquitin-conjugating enzyme E2 variant 1 (UBE2V1) pseudogene, the gene for CTCL tumor antigen L14-2 (FLJ10188 DKFZp762M1412 FLJ32946 FLJ37179 FLJ21086 FLJ32946 FLJ35301), the 5' end of the TDRD1 gene for tudor domain containing 1 and three CpG islands, complete sequence Length = 179009 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 cgaggaggtaaaggaggggaa 116 ||||||||||||||||||||| Sbjct: 83784 cgaggaggtaaaggaggggaa 83764
>gb|AC124126.14| Mus musculus chromosome 18, clone RP23-377C8, complete sequence Length = 192355 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 tttccctcctcctcctccttc 411 ||||||||||||||||||||| Sbjct: 123863 tttccctcctcctcctccttc 123843
>gb|AC000404.1|AC000404 Genomic sequence from Human 9q34, complete sequence Length = 46651 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 393 tccctcctcctcctccttccactct 417 |||||||||||||||||||| |||| Sbjct: 19861 tccctcctcctcctccttcctctct 19837
>gb|U22376.1|HSU22376 Human (c-myb) gene, complete primary cds, and five complete alternatively spliced cds Length = 40433 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gatttccctcctcctcctcct 409 ||||||||||||||||||||| Sbjct: 3024 gatttccctcctcctcctcct 3004
>emb|AL732626.8| Mouse DNA sequence from clone RP23-191F22 on chromosome 4, complete sequence Length = 151688 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tttccctcctcctcctccttc 411 ||||||||||||||||||||| Sbjct: 109216 tttccctcctcctcctccttc 109236
>gb|AC167687.2| Daphnia pulex clone JGIAZSN-5L15, complete sequence Length = 33538 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gatttccctcctcctcctcct 409 ||||||||||||||||||||| Sbjct: 27504 gatttccctcctcctcctcct 27484
>emb|AL663088.10| Mouse DNA sequence from clone RP23-293H17 on chromosome 11, complete sequence Length = 243290 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1427 gcaggggaggggaaaggaagg 1447 ||||||||||||||||||||| Sbjct: 30177 gcaggggaggggaaaggaagg 30197
>gb|U42461.1|XLU42461 Xenopus laevis neural specific DNA binding protein (Xgli3) mRNA, complete cds Length = 6695 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 tttccctcctcctcctccttc 411 ||||||||||||||||||||| Sbjct: 169 tttccctcctcctcctccttc 149
>gb|M95584.1|HUMMYBDBP Human MYB DNA binding protein (c-myb) gene, 5' end Length = 5096 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gatttccctcctcctcctcct 409 ||||||||||||||||||||| Sbjct: 1396 gatttccctcctcctcctcct 1376
>gb|AC158595.25| Mus musculus 10 BAC RP24-216B14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 231740 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 cctcctcctcctccttccact 415 ||||||||||||||||||||| Sbjct: 59885 cctcctcctcctccttccact 59865
>gb|AC123661.22| Mus musculus chromosome 5, clone RP23-211E12, complete sequence Length = 190017 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 tttccctcctcctcctccttc 411 ||||||||||||||||||||| Sbjct: 70224 tttccctcctcctcctccttc 70204
>dbj|AB008487.1| Arabidopsis thaliana ARR4 mRNA for response regulator 4, complete cds Length = 1193 Score = 42.1 bits (21), Expect = 6.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 702 atttgatcatcactgactactgcatgccgggcatgac 738 |||||||||||||||| ||||| ||||| || ||||| Sbjct: 385 atttgatcatcactgattactgtatgcctggaatgac 421
>dbj|AP000855.3| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B697D18, LL56-APP region, complete sequence Length = 142223 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1429 aggggaggggaaaggaaggttgaaa 1453 ||||||||||||||||||| ||||| Sbjct: 69270 aggggaggggaaaggaaggatgaaa 69246
>gb|AC010330.7| Homo sapiens chromosome 19 clone CTD-2657C13, complete sequence Length = 80240 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 ttccctcctcctcctccttcc 412 ||||||||||||||||||||| Sbjct: 48037 ttccctcctcctcctccttcc 48017
>gb|AC133110.2| Homo sapiens BAC clone RP11-761N10 from 4, complete sequence Length = 59902 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tttccctcctcctcctccttc 411 ||||||||||||||||||||| Sbjct: 35201 tttccctcctcctcctccttc 35221
>ref|NM_174757.2| Bos taurus aspartate beta-hydroxylase (ASPH), mRNA gb|M91213.1|BOVASBHY Bos taurus aspartyl (asparaginyl) beta hydroxylase mRNA, complete cds Length = 2739 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1170 ccagcggcggcagcagcagcc 1190 ||||||||||||||||||||| Sbjct: 265 ccagcggcggcagcagcagcc 285
>emb|AL670260.10| Mouse DNA sequence from clone RP23-1I17 on chromosome 4, complete sequence Length = 147052 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 gatttccctcctcctcctcct 409 ||||||||||||||||||||| Sbjct: 132609 gatttccctcctcctcctcct 132629 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 236,387,353 Number of extensions: 17313139 Number of successful extensions: 892392 Number of sequences better than 10.0: 220 Number of HSP's gapped: 892386 Number of HSP's successfully gapped: 283 Length of query: 1570 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1547 Effective length of database: 18,503,978,556 Effective search space: 28625654826132 Effective search space used: 28625654826132 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
