ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf166e10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK121011:Os04g0498700 31 0.68
2AK059661:Os04g0498700 31 0.68
3Os03g0116000:Os03g0116000 29 3.4
4AK072481:Os10g0503200 28 4.4
5AK070086:Os02g0176100 28 7.5
6AK063386:Os02g0176100 28 7.5
7AB100408:Os10g0402200 28 7.5
8AK110015: 27 9.8

>AK121011:Os04g0498700 |
          Length = 508
 Score = 31.2 bits (69), Expect = 0.68
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = -3

Query: 410 NTSPSTRPCLPLCPRSPNSSQQSGTPRPN*AP---RLRSRSNQCSPQTES 270
           ++ P+ RP  PL PR+P     +  P+P+ +P      S +N  SP T +
Sbjct: 154 SSPPAPRPSPPLPPRTPPPPPPAAAPKPSPSPPPAPTNSTTNSSSPSTST 203



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>AK059661:Os04g0498700 |
          Length = 508

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = -3

Query: 410 NTSPSTRPCLPLCPRSPNSSQQSGTPRPN*AP---RLRSRSNQCSPQTES 270
           ++ P+ RP  PL PR+P     +  P+P+ +P      S +N  SP T +
Sbjct: 154 SSPPAPRPSPPLPPRTPPPPPPAAAPKPSPSPPPAPTNSTTNSSSPSTST 203



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>Os03g0116000:Os03g0116000 |
          Length = 440

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -3

Query: 419 HCANTSPSTRPC-LPLCPRSPNSSQQSGTPRPN*APRLRSRSNQCSPQT 276
           H  N SP  +P  LP   RSP+ SQ  G P P        RS   SP++
Sbjct: 36  HSENPSPPAQPPPLPSALRSPSRSQALGLPLPFGLLHASRRSLSTSPRS 84



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>AK072481:Os10g0503200 |
          Length = 577

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +3

Query: 9  IASPFSNLSHLRRPSADVYLLHH 77
          +A P   L+HLRR S+ + LLHH
Sbjct: 30 VAMPPPRLAHLRRRSSSLLLLHH 52



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>AK070086:Os02g0176100 |
          Length = 621

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = -3

Query: 410 NTSPSTRPCLPLCPRSPNSSQQSGTPRPN*APRLRSRSNQCSPQTESSKWVH 255
           + SPS+ P      ++P+S   SGTP P+ +P   S  +     +  S   H
Sbjct: 263 SASPSSTPTGSTPTQTPSSPSSSGTPSPSSSPSNSSGGSTARDSSSPSSRKH 314



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>AK063386:Os02g0176100 |
          Length = 795

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = -3

Query: 410 NTSPSTRPCLPLCPRSPNSSQQSGTPRPN*APRLRSRSNQCSPQTESSKWVH 255
           + SPS+ P      ++P+S   SGTP P+ +P   S  +     +  S   H
Sbjct: 263 SASPSSTPTGSTPTQTPSSPSSSGTPSPSSSPSNSSGGSTARDSSSPSSRKH 314



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>AB100408:Os10g0402200 |
          Length = 718

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = -3

Query: 413 ANTSPSTRPCLPLCPRSPNSSQQSGTPRPN*APRLRSRSNQCSPQTESSKWVHFFRI 243
           A++S S+ P LP   R+      SG   PN  P  RSR +  +   +  +     R+
Sbjct: 29  ASSSSSSAPSLPSSGRARRRIDVSGLASPNPKPGKRSRDDDAAEDDDDDELYERLRL 85



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>AK110015: |
          Length = 840

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +2

Query: 260 PISRIQFEGYIDSSGTVI*ELNLGGESPIVVKNLGISDRGASRVLSMARYSRNAELHAKS 439
           P+  +Q E    SS +     +  GES + +K LG  D  ASR +S  + +  A+  + S
Sbjct: 765 PVHALQAEALERSSSS-----DGAGESHMTIKGLGSEDASASRSVSTPKLTGQAQAGSSS 819


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 20,544,342
Number of extensions: 484443
Number of successful extensions: 1477
Number of sequences better than 10.0: 8
Number of HSP's gapped: 1477
Number of HSP's successfully gapped: 8
Length of query: 227
Length of database: 15,399,855
Length adjustment: 97
Effective length of query: 130
Effective length of database: 11,515,878
Effective search space: 1497064140
Effective search space used: 1497064140
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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