| Clone Name | FLbaf166e10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 278 bits (140), Expect = 2e-71 Identities = 203/224 (90%) Strand = Plus / Plus Query: 2 gccgcccattgcttcccctttctccaatctttctcatcttcggcgacctagcgcagatgt 61 |||||||||||||||||||||| |||||||||||| ||| || |||||||||| |||||| Sbjct: 215626 gccgcccattgcttcccctttccccaatctttctcttctccgacgacctagcgtagatgt 215685 Query: 62 ctacctcctccaccacacactcaaaatggtgacagtatggtccaatgcctctcacaaggt 121 ||||||||| | ||||||| ||||||||| ||| ||||||| ||||||||||||||||| Sbjct: 215686 ctacctcctacgccacacattcaaaatggcaacaatatggtctaatgcctctcacaaggt 215745 Query: 122 gtcctgactacccacgcccagagcctcttaaacggtgggtcagtaagactgatgacaacg 181 ||||||||| || ||||| ||||||||||||||| || ||| |||||||||||||||| | Sbjct: 215746 gtcctgactgcctacgccgagagcctcttaaacgttgagtctgtaagactgatgacaatg 215805 Query: 182 gcaaccttgggcgcgaatttgtgaaatgcttgagcaaaacaatg 225 | |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 215806 gaaaccttgggcacgaatttgtgaaatgcttgagcaaaacaatg 215849 Score = 176 bits (89), Expect = 7e-41 Identities = 147/167 (88%), Gaps = 2/167 (1%) Strand = Plus / Plus Query: 443 ctgaagaagatcaagaaacatctaatgcagatgatcgatttgcataagcaagcaaatatc 502 |||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 216175 ctgaggaagatcaggaaacatctaatgcagatgatcgatttgcagaagcaagcaaatatc 216234 Query: 503 atggaannnnnnnttctattgttgtatcattgctctgtttttcttttacttgttgttcat 562 |||| | ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 216235 atggcaggggg--ttctattgttgtatcattgctctgtttttcttttacttgttattcaa 216292 Query: 563 ccgtcatgagaatgagcatttgggcctgttagggtagaggacgcgat 609 || |||| | |||| |||||| | |||||||||| |||||||||||| Sbjct: 216293 ccatcattacaatgggcatttagtcctgttagggcagaggacgcgat 216339 Score = 143 bits (72), Expect = 9e-31 Identities = 150/176 (85%) Strand = Plus / Plus Query: 272 attcagtttgagggctacattgattcgagcgggaccgtaatctaggagctcaatttgggc 331 ||||| ||| ||||||||||||||||||||||| ||| ||||| |||||||||||||||| Sbjct: 215992 attcaatttaagggctacattgattcgagcggggccgcaatctgggagctcaatttgggc 216051 Query: 332 ggggagtccccgattgttgtgaagaatttggggatctcggacagaggggcaagcagggtc 391 | |||| | |||||||||||| |||||||||||| ||||| | | |||| ||| ||| Sbjct: 216052 gaggagccgccgattgttgtggagaatttggggagttcggagaaacgggcgtgcaaagtc 216111 Query: 392 ttgtcgatggcgaggtattcgcgcaatgctgaactgcacgcgaagtccgaactgaa 447 || |||||| ||||||| | ||||||| ||||||||||||| |||| |||||||| Sbjct: 216112 ctgccgatggtgaggtatgcacgcaatgttgaactgcacgcggagtctgaactgaa 216167
>gb|AC131297.11| Mus musculus chromosome 8, clone RP23-284E15, complete sequence Length = 188817 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 tgaagaagatcaagaaacatct 465 |||||||||||||||||||||| Sbjct: 97503 tgaagaagatcaagaaacatct 97524
>emb|CR956619.7| M.truncatula DNA sequence from clone MTH2-65F22 on chromosome 3, complete sequence Length = 148409 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Minus Query: 531 attgctctgtttttcttttact 552 |||||||||||||||||||||| Sbjct: 57073 attgctctgtttttcttttact 57052
>dbj|AB191243.1| Homo sapiens DNA, transposon SVA sequence Length = 463567 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 644 aagcaaaaaattggaaaatta 664 ||||||||||||||||||||| Sbjct: 307867 aagcaaaaaattggaaaatta 307847
>gb|CP000383.1| Cytophaga hutchinsonii ATCC 33406, complete genome Length = 4433218 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 attgctctgtttttcttttac 551 ||||||||||||||||||||| Sbjct: 1386452 attgctctgtttttcttttac 1386472
>gb|AC099631.6| Mus musculus chromosome 1, clone RP24-93F22, complete sequence Length = 185048 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 539 gtttttcttttacttgttgtt 559 ||||||||||||||||||||| Sbjct: 156375 gtttttcttttacttgttgtt 156395
>gb|AC099589.12| Mus musculus chromosome 1, clone RP23-337A19, complete sequence Length = 264062 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 539 gtttttcttttacttgttgtt 559 ||||||||||||||||||||| Sbjct: 214714 gtttttcttttacttgttgtt 214694
>gb|AC129190.3| Mus musculus BAC clone RP24-79D2 from chromosome 1, complete sequence Length = 236342 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 539 gtttttcttttacttgttgtt 559 ||||||||||||||||||||| Sbjct: 191453 gtttttcttttacttgttgtt 191433
>gb|AC139029.10| Mus musculus chromosome 14, clone RP23-393A18, complete sequence Length = 204943 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 535 ctctgtttttcttttacttgttgtt 559 |||||||||||||||||||| |||| Sbjct: 25404 ctctgtttttcttttacttggtgtt 25380
>gb|AC140322.4| Mus musculus BAC clone RP23-413F14 from chromosome 14, complete sequence Length = 205679 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 535 ctctgtttttcttttacttgttgtt 559 |||||||||||||||||||| |||| Sbjct: 65781 ctctgtttttcttttacttggtgtt 65805
>emb|AL356257.14| Human DNA sequence from clone RP11-789G22 on chromosome 13 Contains the 5' end of the ABCC4 gene for ATP-binding cassette, sub-family C (CFTR/MRP), member4, a novel gene and a CpG island, complete sequence Length = 193483 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 529 tcattgctctgtttttctttt 549 ||||||||||||||||||||| Sbjct: 40917 tcattgctctgtttttctttt 40897
>emb|AL138969.16| Human DNA sequence from clone RP1-110C15 on chromosome X, complete sequence Length = 144658 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 348 ttgtgaagaatttggggatct 368 ||||||||||||||||||||| Sbjct: 28958 ttgtgaagaatttggggatct 28938
>gb|AC108479.5| Homo sapiens BAC clone RP11-1378G18 from 2, complete sequence Length = 184433 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 ttgtgaagaatttggggatct 368 ||||||||||||||||||||| Sbjct: 23987 ttgtgaagaatttggggatct 24007
>gb|AC113036.8| Mus musculus chromosome 13, clone RP23-223B10, complete sequence Length = 190133 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 643 gaagcaaaaaattggaaaatt 663 ||||||||||||||||||||| Sbjct: 65892 gaagcaaaaaattggaaaatt 65872
>emb|AL590763.2|HSXDPB Homo sapiens chromosome X sequence from 6 PACs 1 BAC and 1 cosmid, region GJB1-DXS559 map Xq13.1, complete sequence Length = 248968 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 644 aagcaaaaaattggaaaatta 664 ||||||||||||||||||||| Sbjct: 25800 aagcaaaaaattggaaaatta 25780
>emb|AL845352.7| Mouse DNA sequence from clone RP23-29A7 on chromosome 2, complete sequence Length = 196996 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 537 ctgtttttcttttacttgttg 557 ||||||||||||||||||||| Sbjct: 144992 ctgtttttcttttacttgttg 145012 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 120,350,130 Number of extensions: 6443396 Number of successful extensions: 170714 Number of sequences better than 10.0: 16 Number of HSP's gapped: 170713 Number of HSP's successfully gapped: 19 Length of query: 682 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 660 Effective length of database: 18,508,616,841 Effective search space: 12215687115060 Effective search space used: 12215687115060 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)