ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf166d19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os05g0533800:Os05g0533800 221 5e-58
2AK121212:Os01g0600000 191 4e-49
3AK069826:Os03g0849800 30 2.8
4Os11g0696400:Os11g0696400 28 8.0

>Os05g0533800:Os05g0533800 |
          Length = 125
 Score =  221 bits (563), Expect = 5e-58
 Identities = 99/125 (79%), Positives = 112/125 (89%)
 Frame = +2

Query: 152 MAALGSKLAQLQAKACEATRFAARHGCAYHKTLMEKNKQFVVQPPTVEKCQELSKQLFYT 331
           MAAL SKLAQ+QAKAC+A RFAA+HGCAYH+ LMEKN+++V  PPT+E+CQELSKQLFYT
Sbjct: 1   MAALASKLAQMQAKACDAARFAAKHGCAYHRALMEKNQKYVADPPTIERCQELSKQLFYT 60

Query: 332 RIASIPGRCEAFWKEVDQVKQLWRNRSDLNVEHAGIAALFGLELYGWFCVGEIAGRGFTL 511
           R+AS+PGR EAFWKE DQVK LWRNR DLNVEHAG+AALFG+ELY WFCVGEI GRGFT 
Sbjct: 61  RLASLPGRYEAFWKEADQVKNLWRNRKDLNVEHAGVAALFGIELYAWFCVGEIVGRGFTF 120

Query: 512 TGYSV 526
           TGY V
Sbjct: 121 TGYHV 125



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>AK121212:Os01g0600000 |
          Length = 122

 Score =  191 bits (486), Expect = 4e-49
 Identities = 86/122 (70%), Positives = 103/122 (84%)
 Frame = +2

Query: 161 LGSKLAQLQAKACEATRFAARHGCAYHKTLMEKNKQFVVQPPTVEKCQELSKQLFYTRIA 340
           + S+LAQL++KA +A+   ++HGCAY+K +MEKNKQ VVQPPTVEKCQELSKQLFYTR+A
Sbjct: 1   MASRLAQLRSKAAQASELVSKHGCAYYKEVMEKNKQHVVQPPTVEKCQELSKQLFYTRLA 60

Query: 341 SIPGRCEAFWKEVDQVKQLWRNRSDLNVEHAGIAALFGLELYGWFCVGEIAGRGFTLTGY 520
           S+PGR EAFWKE D VKQ+W+NR +L VE  GI  LFG+ELY WFCVGEI GRGFT+TGY
Sbjct: 61  SLPGRYEAFWKEFDGVKQVWKNRKELKVEDLGIVTLFGVELYAWFCVGEIVGRGFTITGY 120

Query: 521 SV 526
            V
Sbjct: 121 KV 122



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>AK069826:Os03g0849800 |
          Length = 246

 Score = 29.6 bits (65), Expect = 2.8
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +2

Query: 275 VQPPTVEKCQELSKQLFYTRIASIPGRCEAFWKEVDQVKQLW-RNRSDLNVEHAGIAALF 451
           + P   E CQ + +  ++ R   +  R E  +   D ++ +W RN+    +   G   LF
Sbjct: 170 MDPAAYEGCQAVHRHCYFLRTTGVDYRSEKMFMSKDYLEMMWGRNKFQQTILELGYNFLF 229

Query: 452 GLELYGWF 475
                 WF
Sbjct: 230 TDVDVMWF 237



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>Os11g0696400:Os11g0696400 |
          Length = 816

 Score = 28.1 bits (61), Expect = 8.0
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 140 ADPSMAALGSKLAQLQAKACEATRFA 217
           A P+  A+G   A++  K C+ATRFA
Sbjct: 34  ASPADTAVGGIAAKVYTKVCDATRFA 59


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 21,545,552
Number of extensions: 439659
Number of successful extensions: 1441
Number of sequences better than 10.0: 4
Number of HSP's gapped: 1439
Number of HSP's successfully gapped: 4
Length of query: 281
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 182
Effective length of database: 11,435,796
Effective search space: 2081314872
Effective search space used: 2081314872
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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