ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf166c18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 1037 bits (523), Expect = 0.0 Identities = 553/563 (98%) Strand = Plus / Minus Query: 573 agaactccccgtgcgacccatgcatggctcactgctgcctgcactggtgtgccaactgcc 632 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 51117 agaactccccgtgcgacccatgcatggctcactgctgcctgcactggtgcgccaactgcc 51058 Query: 633 aggagcaccgcgagaggaggggccgcctggccgaccacagcgctgtgcccatgactgttg 692 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51057 aggagcaccgcgagaggaggggccgcctggccgaccacagcgctgtgcccatgactgttg 50998 Query: 693 tcaacccgcccccggtccaggagatgagcatgtcagagaaccgcgacgcccctgcccctg 752 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50997 tcaacccgcccccggtccaggagatgagcatgtcagagaaccgcgacgcccctgcccctg 50938 Query: 753 ccaacccggagaacggatcatccaacaaggctgagctcgaagcgcgcaagagcgaccacg 812 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 50937 ccaacccggagaacggatcatccaacaaggctgagctcgaagcgcgcaagagcaaccacg 50878 Query: 813 acgatgtggaggtcatccctctatagaccaaccaaagaaagaaaaataaagccaacggag 872 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50877 acgacgtcgaggtcatccctctatagaccaaccaaagaaagaaaaataaagccaacggag 50818 Query: 873 tttcgatatacagaagaatgttaggatagcatgatggcgggagcgagcgaggcatgagaa 932 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 50817 tttcgatatacagaagaatgttaggatagcatgatggctggagcgagcgaggcatgagaa 50758 Query: 933 aggaaagattgtccctccgtgaacttgttagtggaatcgctgatcaatgttctcgtctcc 992 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50757 aggaaagattgtccgtccgtgaacttgttagtggaatcgctgatcaatgttctcgtctcc 50698 Query: 993 aatcttgaaccattactgtaactcaatgaggtcgttagttcgttatcttctgatgaaggt 1052 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 50697 aatcttgaaccattactgtaactcaacgaggtcgttagtttgttatcttctgatgaaggt 50638 Query: 1053 ggtttttatgtgtacaatcgaagaagataaccagagctaattatttgtctgctgaatcga 1112 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 50637 ggtttttatgtgtacaatcgaagaagatagccagagctaattatttgtctgctgaatcga 50578 Query: 1113 ctacttcaaattcattcgcaaat 1135 ||||||||||||||||| ||||| Sbjct: 50577 ctacttcaaattcattcacaaat 50555 Score = 519 bits (262), Expect = e-144 Identities = 265/266 (99%) Strand = Plus / Minus Query: 309 gtcgcactggattgttctgtccttgtgtactgtttgggcgcaacgttgaggccctcagag 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51969 gtcgcactggattgttctgtccttgtgtactgtttgggcgcaacgttgaggccctcagag 51910 Query: 369 aggatataccttggacaacgccttgtgtttgccatgccatctttgtggaaggagggatta 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51909 aggatataccttggacaacgccttgtgtttgccatgccatctttgtggaaggagggatta 51850 Query: 429 cacttgcaatcctgacagcaatatttcatggtgttgacccaagatcatcgtttcttattg 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51849 cacttgcaatcctgacagcaatatttcatggtgttgacccaagatcatcgtttcttattg 51790 Query: 489 gagaaggcctggtgtttagttggtggttatgtggtacctatactggcattttccgtcagg 548 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 51789 gagaaggcctggtgtttagttggtggttgtgtggtacctatactggcattttccgtcagg 51730 Query: 549 aactccagaagagatatcatctcaag 574 |||||||||||||||||||||||||| Sbjct: 51729 aactccagaagagatatcatctcaag 51704 Score = 359 bits (181), Expect = 1e-95 Identities = 190/193 (98%) Strand = Plus / Minus Query: 1 tggagtcaggtcagatctggcagccgccccccgctgcggccagtcttagcagtgtccgcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 54171 tggagtcaggtcagatctggcagccgccccccgctgcggccagtcttagcagtgtccgcc 54112 Query: 61 gggtcgccgccgccggcaagcaatggcggaggagggccacccgtcccgctacgtcaagct 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 54111 gggtcgccgccgccggcaagcaatggcggaggagggccacccgtcccgctacgtcaagct 54052 Query: 121 caccaaggaccaggacgcccccggcgaggacatccgccccggcgagctcaaccagcccgt 180 |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 54051 caccaaggaccaggacgctcccagcgaggacatccgccccggcgagctcaaccagcccgt 53992 Query: 181 ccacgtcccccag 193 ||| ||||||||| Sbjct: 53991 ccatgtcccccag 53979 Score = 238 bits (120), Expect = 4e-59 Identities = 120/120 (100%) Strand = Plus / Minus Query: 191 cagctcgagggcaggaggtgcggcgagtgcggccaggtcctcccggagagctacgagccg 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53897 cagctcgagggcaggaggtgcggcgagtgcggccaggtcctcccggagagctacgagccg 53838 Query: 251 cccgccgacgagccgtggaccaccgggatcttcggctgcaccgacgaccccgagagctgt 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53837 cccgccgacgagccgtggaccaccgggatcttcggctgcaccgacgaccccgagagctgt 53778
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 577 bits (291), Expect = e-161 Identities = 453/504 (89%), Gaps = 11/504 (2%) Strand = Plus / Minus Query: 573 agaactccccgtgcgacccatgcatggctcactgctgcctgcactggtgtgccaactgcc 632 |||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 27249 agaactccccatgcgacccatgcatggcccactgctgcctgcactggtgcgccaactgcc 27190 Query: 633 aggagcaccgcgagaggaggggccgcctggccgaccacagcgctgtgcccatgactgttg 692 ||||||||||||||||||| |||| |||||||||||||||||| |||||||||| || | Sbjct: 27189 aggagcaccgcgagaggagaggccacctggccgaccacagcgccatgcccatgaccgtcg 27130 Query: 693 tcaacccgcccccggtccaggagatgagcatgtcagagaaccgcgacgcccc------tg 746 ||||||||||||| || || |||||||||||||||||||||| || |||||| || Sbjct: 27129 tcaacccgccccccgtgcaagagatgagcatgtcagagaaccacgccgcccccgcccctg 27070 Query: 747 cccctgccaacccggagaac---ggatcatccaacaaggctgagctcgaagcgcgcaaga 803 |||||||||||||||||| | ||| |||| |||| ||||||||| ||||||||||||| Sbjct: 27069 cccctgccaacccggagaccaatggagcatcgaacagggctgagctggaagcgcgcaaga 27010 Query: 804 gcgaccacgacgatgtggaggtcatccctctatagaccaaccaaagaaagaaaaataaag 863 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27009 gcgaccacgacgacgtcgaggtcatccctctatagaccaaccaaagaaagaaaaataaag 26950 Query: 864 ccaacggagtttcgatatacagaagaatgttaggatagcatgatggcgggagcgagcgag 923 |||| ||| ||| ||||||| ||||||||||||||||||| ||| | |||| ||||||| Sbjct: 26949 ccaatggaattttgatataccgaagaatgttaggatagca-gatcgatggagtgagcgag 26891 Query: 924 gcatgagaaaggaaagattgtccctccgtgaacttgttagtggaatcgctgatcaatgtt 983 |||||||||||||||||||| ||||||||||| ||||||||||||| |||||| ||||| Sbjct: 26890 gcatgagaaaggaaagattgaccctccgtgaatttgttagtggaattgctgattgatgtt 26831 Query: 984 ctcgtctccaatcttgaaccattactgtaactcaatgaggtcgttagttcgttatcttct 1043 ||||||||||||||||||||||||||||||||||| || |||||||||||| || ||| Sbjct: 26830 ctcgtctccaatcttgaaccattactgtaactcaacgatgtcgttagttcg-cattatct 26772 Query: 1044 gatgaaggtggtttttatgtgtac 1067 | |||||||||||||||||||||| Sbjct: 26771 gctgaaggtggtttttatgtgtac 26748 Score = 456 bits (230), Expect = e-125 Identities = 257/266 (96%) Strand = Plus / Minus Query: 309 gtcgcactggattgttctgtccttgtgtactgtttgggcgcaacgttgaggccctcagag 368 ||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||| Sbjct: 28054 gtcgcactggattgttctgtccttgcgtgctgtttgggcgcaatgttgaggccctcagag 27995 Query: 369 aggatataccttggacaacgccttgtgtttgccatgccatctttgtggaaggagggatta 428 ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 27994 aggatatcccttggacaacgccttgtgtttgccatgctatctttgtggaaggagggatta 27935 Query: 429 cacttgcaatcctgacagcaatatttcatggtgttgacccaagatcatcgtttcttattg 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27934 cacttgcaatcctgacagcaatatttcatggtgttgacccaagatcatcgtttcttattg 27875 Query: 489 gagaaggcctggtgtttagttggtggttatgtggtacctatactggcattttccgtcagg 548 ||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||| | Sbjct: 27874 gagaaggtctggtgtttagttggtggctgtgtggtacctatactggcattttccgtcaag 27815 Query: 549 aactccagaagagatatcatctcaag 574 |||||||||||||||||||||||||| Sbjct: 27814 aactccagaagagatatcatctcaag 27789 Score = 291 bits (147), Expect = 3e-75 Identities = 147/147 (100%) Strand = Plus / Minus Query: 47 tagcagtgtccgccgggtcgccgccgccggcaagcaatggcggaggagggccacccgtcc 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29860 tagcagtgtccgccgggtcgccgccgccggcaagcaatggcggaggagggccacccgtcc 29801 Query: 107 cgctacgtcaagctcaccaaggaccaggacgcccccggcgaggacatccgccccggcgag 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29800 cgctacgtcaagctcaccaaggaccaggacgcccccggcgaggacatccgccccggcgag 29741 Query: 167 ctcaaccagcccgtccacgtcccccag 193 ||||||||||||||||||||||||||| Sbjct: 29740 ctcaaccagcccgtccacgtcccccag 29714 Score = 214 bits (108), Expect = 5e-52 Identities = 117/120 (97%) Strand = Plus / Minus Query: 191 cagctcgagggcaggaggtgcggcgagtgcggccaggtcctcccggagagctacgagccg 250 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29640 cagctcgagggccggaggtgcggcgagtgcggccaggtcctcccggagagctacgagccg 29581 Query: 251 cccgccgacgagccgtggaccaccgggatcttcggctgcaccgacgaccccgagagctgt 310 |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 29580 cccgccgacgagccgtggtccaccgggatcttcgggtgcaccgacgaccccgagagctgt 29521 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gtcaggtcagatctggcagcc 25 ||||||||||||||||||||| Sbjct: 29896 gtcaggtcagatctggcagcc 29876
>gb|AY107371.1| Zea mays PCO141127 mRNA sequence Length = 976 Score = 565 bits (285), Expect = e-157 Identities = 543/629 (86%) Strand = Plus / Plus Query: 96 gccacccgtcccgctacgtcaagctcaccaaggaccaggacgcccccggcgaggacatcc 155 |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 88 gccacccgtcacgctacgtcaagctcaccaaggaccaggacgcccccgccgaggacatcc 147 Query: 156 gccccggcgagctcaaccagcccgtccacgtcccccagctcgagggcaggaggtgcggcg 215 |||||||||||||||||||||| || |||||||| |||||||| ||| ||||||| ||| Sbjct: 148 gccccggcgagctcaaccagccagttcacgtcccgcagctcgaaggccggaggtgtagcg 207 Query: 216 agtgcggccaggtcctcccggagagctacgagccgcccgccgacgagccgtggaccaccg 275 ||||||| |||||||| || ||||||||||||||||||||||||||||| |||||||||| Sbjct: 208 agtgcggtcaggtcctgcccgagagctacgagccgcccgccgacgagccctggaccaccg 267 Query: 276 ggatcttcggctgcaccgacgaccccgagagctgtcgcactggattgttctgtccttgtg 335 |||||||||| |||||||| ||||| |||| ||| || ||||||||||| || || || | Sbjct: 268 ggatcttcggatgcaccgatgacccagagacctgccgaactggattgttttgcccctgcg 327 Query: 336 tactgtttgggcgcaacgttgaggccctcagagaggatataccttggacaacgccttgtg 395 | ||||||||||||||||||||||| | || ||||| || ||||||||||| ||||| | Sbjct: 328 tgctgtttgggcgcaacgttgaggctgttagggaggacatcccttggacaactccttgcg 387 Query: 396 tttgccatgccatctttgtggaaggagggattacacttgcaatcctgacagcaatatttc 455 | |||||||| | || || ||||||||||| || || || || ||||| || ||||||| Sbjct: 388 tgtgccatgctgtattcgttgaaggagggatcacgctggcgattctgacggcgatatttc 447 Query: 456 atggtgttgacccaagatcatcgtttcttattggagaaggcctggtgtttagttggtggt 515 | |||||||| || || | || || || ||||||||||| |||||||| || ||||||| Sbjct: 448 acggtgttgatccgaggacgtcattcctgattggagaaggtctggtgttcagctggtggt 507 Query: 516 tatgtggtacctatactggcattttccgtcaggaactccagaagagatatcatctcaaga 575 |||||| |||||| |||||||| ||||| |||| || |||| || |||||||||||||| Sbjct: 508 tatgtgctacctacactggcatcttccgccaggggcttcagaggaaatatcatctcaaga 567 Query: 576 actccccgtgcgacccatgcatggctcactgctgcctgcactggtgtgccaactgccagg 635 |||| ||||| ||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 568 actctccgtgtgacccatgcatggtccactgctgcttgcactggtgtgccaactgccagg 627 Query: 636 agcaccgcgagaggaggggccgcctggccgaccacagcgctgtgcccatgactgttgtca 695 |||| |||||||||| ||| || || || || ||| ||| ||||||||||| ||||| | Sbjct: 628 agcatcgcgagaggacgggacggcttgcagagaacaacgcagtgcccatgacggttgtga 687 Query: 696 acccgcccccggtccaggagatgagcatg 724 ||||||| ||||| || |||||||||||| Sbjct: 688 acccgcctccggtgcaagagatgagcatg 716 Score = 48.1 bits (24), Expect = 0.071 Identities = 36/40 (90%) Strand = Plus / Plus Query: 800 aagagcgaccacgacgatgtggaggtcatccctctataga 839 ||||| || ||||| |||||||||||||| |||||||||| Sbjct: 747 aagagtgaacacgatgatgtggaggtcattcctctataga 786
>ref|NM_001055192.1| Oryza sativa (japonica cultivar-group) Os03g0101800 (Os03g0101800) mRNA, complete cds Length = 1003 Score = 472 bits (238), Expect = e-129 Identities = 478/558 (85%) Strand = Plus / Plus Query: 136 cgcccccggcgaggacatccgccccggcgagctcaaccagcccgtccacgtcccccagct 195 |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 108 cgcccccgccgaggacatccgccccggcgagctcaaccagccagtccacgtcccgcagct 167 Query: 196 cgagggcaggaggtgcggcgagtgcggccaggtcctcccggagagctacgagccgcccgc 255 |||||||||||||||| ||||||||||||||||||| ||||| ||||||||| ||||| Sbjct: 168 cgagggcaggaggtgcagcgagtgcggccaggtcctgccggaatcctacgagccccccgc 227 Query: 256 cgacgagccgtggaccaccgggatcttcggctgcaccgacgaccccgagagctgtcgcac 315 ||||||||| ||||||||||||||||||| |||||||||||| || | | ||| || || Sbjct: 228 cgacgagccctggaccaccgggatcttcgcctgcaccgacgatccacaaacctgccgaac 287 Query: 316 tggattgttctgtccttgtgtactgtttgggcgcaacgttgaggccctcagagaggatat 375 ||| ||||||||||||||||| || ||||| ||||| |||||||||||||||||||||| Sbjct: 288 tgggttgttctgtccttgtgttctttttggacgcaatattgaggccctcagagaggatat 347 Query: 376 accttggacaacgccttgtgtttgccatgccatctttgtggaaggagggattacacttgc 435 ||||||||||||||||||||||||||||| ||||||| |||||||||||| | ||||| Sbjct: 348 cccttggacaacgccttgtgtttgccatgctgtctttgttgaaggagggattgcgcttgc 407 Query: 436 aatcctgacagcaatatttcatggtgttgacccaagatcatcgtttcttattggagaagg 495 ||| || || |||||||||||||||||||| || ||| | || || || ||||||||||| Sbjct: 408 aattctcaccgcaatatttcatggtgttgatcccagaacgtctttcctgattggagaagg 467 Query: 496 cctggtgtttagttggtggttatgtggtacctatactggcattttccgtcaggaactcca 555 ||||||| || |||||||| |||||||| ||||| ||||| || || || ||||| || Sbjct: 468 tttggtgttcagctggtggttgtgtggtacttatacgggcatctttcgccaagaacttca 527 Query: 556 gaagagatatcatctcaagaactccccgtgcgacccatgcatggctcactgctgcctgca 615 || || ||| ||||||||||| || || || ||||| ||||||| || |||||| |||| Sbjct: 528 gaggaaataccatctcaagaattctccatgtgacccttgcatggtccattgctgcttgca 587 Query: 616 ctggtgtgccaactgccaggagcaccgcgagaggaggggccgcctggccgaccacagcgc 675 |||||| || || || ||||||||||| || |||| ||| || || || || ||||||| Sbjct: 588 ctggtgcgcgaattgtcaggagcaccgtgaaaggacggggcggcttgcagagaacagcgc 647 Query: 676 tgtgcccatgactgttgt 693 ||||| ||||| ||||| Sbjct: 648 ggtgccaatgaccgttgt 665
>dbj|AK104399.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-D11, full insert sequence Length = 1023 Score = 472 bits (238), Expect = e-129 Identities = 478/558 (85%) Strand = Plus / Plus Query: 136 cgcccccggcgaggacatccgccccggcgagctcaaccagcccgtccacgtcccccagct 195 |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 108 cgcccccgccgaggacatccgccccggcgagctcaaccagccagtccacgtcccgcagct 167 Query: 196 cgagggcaggaggtgcggcgagtgcggccaggtcctcccggagagctacgagccgcccgc 255 |||||||||||||||| ||||||||||||||||||| ||||| ||||||||| ||||| Sbjct: 168 cgagggcaggaggtgcagcgagtgcggccaggtcctgccggaatcctacgagccccccgc 227 Query: 256 cgacgagccgtggaccaccgggatcttcggctgcaccgacgaccccgagagctgtcgcac 315 ||||||||| ||||||||||||||||||| |||||||||||| || | | ||| || || Sbjct: 228 cgacgagccctggaccaccgggatcttcgcctgcaccgacgatccacaaacctgccgaac 287 Query: 316 tggattgttctgtccttgtgtactgtttgggcgcaacgttgaggccctcagagaggatat 375 ||| ||||||||||||||||| || ||||| ||||| |||||||||||||||||||||| Sbjct: 288 tgggttgttctgtccttgtgttctttttggacgcaatattgaggccctcagagaggatat 347 Query: 376 accttggacaacgccttgtgtttgccatgccatctttgtggaaggagggattacacttgc 435 ||||||||||||||||||||||||||||| ||||||| |||||||||||| | ||||| Sbjct: 348 cccttggacaacgccttgtgtttgccatgctgtctttgttgaaggagggattgcgcttgc 407 Query: 436 aatcctgacagcaatatttcatggtgttgacccaagatcatcgtttcttattggagaagg 495 ||| || || |||||||||||||||||||| || ||| | || || || ||||||||||| Sbjct: 408 aattctcaccgcaatatttcatggtgttgatcccagaacgtctttcctgattggagaagg 467 Query: 496 cctggtgtttagttggtggttatgtggtacctatactggcattttccgtcaggaactcca 555 ||||||| || |||||||| |||||||| ||||| ||||| || || || ||||| || Sbjct: 468 tttggtgttcagctggtggttgtgtggtacttatacgggcatctttcgccaagaacttca 527 Query: 556 gaagagatatcatctcaagaactccccgtgcgacccatgcatggctcactgctgcctgca 615 || || ||| ||||||||||| || || || ||||| ||||||| || |||||| |||| Sbjct: 528 gaggaaataccatctcaagaattctccatgtgacccttgcatggtccattgctgcttgca 587 Query: 616 ctggtgtgccaactgccaggagcaccgcgagaggaggggccgcctggccgaccacagcgc 675 |||||| || || || ||||||||||| || |||| ||| || || || || ||||||| Sbjct: 588 ctggtgcgcgaattgtcaggagcaccgtgaaaggacggggcggcttgcagagaacagcgc 647 Query: 676 tgtgcccatgactgttgt 693 ||||| ||||| ||||| Sbjct: 648 ggtgccaatgaccgttgt 665
>dbj|AK103196.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121P22, full insert sequence Length = 1048 Score = 472 bits (238), Expect = e-129 Identities = 478/558 (85%) Strand = Plus / Plus Query: 136 cgcccccggcgaggacatccgccccggcgagctcaaccagcccgtccacgtcccccagct 195 |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 112 cgcccccgccgaggacatccgccccggcgagctcaaccagccagtccacgtcccgcagct 171 Query: 196 cgagggcaggaggtgcggcgagtgcggccaggtcctcccggagagctacgagccgcccgc 255 |||||||||||||||| ||||||||||||||||||| ||||| ||||||||| ||||| Sbjct: 172 cgagggcaggaggtgcagcgagtgcggccaggtcctgccggaatcctacgagccccccgc 231 Query: 256 cgacgagccgtggaccaccgggatcttcggctgcaccgacgaccccgagagctgtcgcac 315 ||||||||| ||||||||||||||||||| |||||||||||| || | | ||| || || Sbjct: 232 cgacgagccctggaccaccgggatcttcgcctgcaccgacgatccacaaacctgccgaac 291 Query: 316 tggattgttctgtccttgtgtactgtttgggcgcaacgttgaggccctcagagaggatat 375 ||| ||||||||||||||||| || ||||| ||||| |||||||||||||||||||||| Sbjct: 292 tgggttgttctgtccttgtgttctttttggacgcaatattgaggccctcagagaggatat 351 Query: 376 accttggacaacgccttgtgtttgccatgccatctttgtggaaggagggattacacttgc 435 ||||||||||||||||||||||||||||| ||||||| |||||||||||| | ||||| Sbjct: 352 cccttggacaacgccttgtgtttgccatgctgtctttgttgaaggagggattgcgcttgc 411 Query: 436 aatcctgacagcaatatttcatggtgttgacccaagatcatcgtttcttattggagaagg 495 ||| || || |||||||||||||||||||| || ||| | || || || ||||||||||| Sbjct: 412 aattctcaccgcaatatttcatggtgttgatcccagaacgtctttcctgattggagaagg 471 Query: 496 cctggtgtttagttggtggttatgtggtacctatactggcattttccgtcaggaactcca 555 ||||||| || |||||||| |||||||| ||||| ||||| || || || ||||| || Sbjct: 472 tttggtgttcagctggtggttgtgtggtacttatacgggcatctttcgccaagaacttca 531 Query: 556 gaagagatatcatctcaagaactccccgtgcgacccatgcatggctcactgctgcctgca 615 || || ||| ||||||||||| || || || ||||| ||||||| || |||||| |||| Sbjct: 532 gaggaaataccatctcaagaattctccatgtgacccttgcatggtccattgctgcttgca 591 Query: 616 ctggtgtgccaactgccaggagcaccgcgagaggaggggccgcctggccgaccacagcgc 675 |||||| || || || ||||||||||| || |||| ||| || || || || ||||||| Sbjct: 592 ctggtgcgcgaattgtcaggagcaccgtgaaaggacggggcggcttgcagagaacagcgc 651 Query: 676 tgtgcccatgactgttgt 693 ||||| ||||| ||||| Sbjct: 652 ggtgccaatgaccgttgt 669
>dbj|AK061186.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-E05, full insert sequence Length = 1002 Score = 472 bits (238), Expect = e-129 Identities = 478/558 (85%) Strand = Plus / Plus Query: 136 cgcccccggcgaggacatccgccccggcgagctcaaccagcccgtccacgtcccccagct 195 |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 108 cgcccccgccgaggacatccgccccggcgagctcaaccagccagtccacgtcccgcagct 167 Query: 196 cgagggcaggaggtgcggcgagtgcggccaggtcctcccggagagctacgagccgcccgc 255 |||||||||||||||| ||||||||||||||||||| ||||| ||||||||| ||||| Sbjct: 168 cgagggcaggaggtgcagcgagtgcggccaggtcctgccggaatcctacgagccccccgc 227 Query: 256 cgacgagccgtggaccaccgggatcttcggctgcaccgacgaccccgagagctgtcgcac 315 ||||||||| ||||||||||||||||||| |||||||||||| || | | ||| || || Sbjct: 228 cgacgagccctggaccaccgggatcttcgcctgcaccgacgatccacaaacctgccgaac 287 Query: 316 tggattgttctgtccttgtgtactgtttgggcgcaacgttgaggccctcagagaggatat 375 ||| ||||||||||||||||| || ||||| ||||| |||||||||||||||||||||| Sbjct: 288 tgggttgttctgtccttgtgttctttttggacgcaatattgaggccctcagagaggatat 347 Query: 376 accttggacaacgccttgtgtttgccatgccatctttgtggaaggagggattacacttgc 435 ||||||||||||||||||||||||||||| ||||||| |||||||||||| | ||||| Sbjct: 348 cccttggacaacgccttgtgtttgccatgctgtctttgttgaaggagggattgcgcttgc 407 Query: 436 aatcctgacagcaatatttcatggtgttgacccaagatcatcgtttcttattggagaagg 495 ||| || || |||||||||||||||||||| || ||| | || || || ||||||||||| Sbjct: 408 aattctcaccgcaatatttcatggtgttgatcccagaacgtctttcctgattggagaagg 467 Query: 496 cctggtgtttagttggtggttatgtggtacctatactggcattttccgtcaggaactcca 555 ||||||| || |||||||| |||||||| ||||| ||||| || || || ||||| || Sbjct: 468 tttggtgttcagctggtggttgtgtggtacttatacgggcatctttcgccaagaacttca 527 Query: 556 gaagagatatcatctcaagaactccccgtgcgacccatgcatggctcactgctgcctgca 615 || || ||| ||||||||||| || || || ||||| ||||||| || |||||| |||| Sbjct: 528 gaggaaataccatctcaagaattctccatgtgacccttgcatggtccattgctgcttgca 587 Query: 616 ctggtgtgccaactgccaggagcaccgcgagaggaggggccgcctggccgaccacagcgc 675 |||||| || || || ||||||||||| || |||| ||| || || || || ||||||| Sbjct: 588 ctggtgcgcgaattgtcaggagcaccgtgaaaggacggggcggcttgcagagaacagcgc 647 Query: 676 tgtgcccatgactgttgt 693 ||||| ||||| ||||| Sbjct: 648 ggtgccaatgaccgttgt 665
>dbj|AK061092.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-H10, full insert sequence Length = 1097 Score = 472 bits (238), Expect = e-129 Identities = 478/558 (85%) Strand = Plus / Plus Query: 136 cgcccccggcgaggacatccgccccggcgagctcaaccagcccgtccacgtcccccagct 195 |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 110 cgcccccgccgaggacatccgccccggcgagctcaaccagccagtccacgtcccgcagct 169 Query: 196 cgagggcaggaggtgcggcgagtgcggccaggtcctcccggagagctacgagccgcccgc 255 |||||||||||||||| ||||||||||||||||||| ||||| ||||||||| ||||| Sbjct: 170 cgagggcaggaggtgcagcgagtgcggccaggtcctgccggaatcctacgagccccccgc 229 Query: 256 cgacgagccgtggaccaccgggatcttcggctgcaccgacgaccccgagagctgtcgcac 315 ||||||||| ||||||||||||||||||| |||||||||||| || | | ||| || || Sbjct: 230 cgacgagccctggaccaccgggatcttcgcctgcaccgacgatccacaaacctgccgaac 289 Query: 316 tggattgttctgtccttgtgtactgtttgggcgcaacgttgaggccctcagagaggatat 375 ||| ||||||||||||||||| || ||||| ||||| |||||||||||||||||||||| Sbjct: 290 tgggttgttctgtccttgtgttctttttggacgcaatattgaggccctcagagaggatat 349 Query: 376 accttggacaacgccttgtgtttgccatgccatctttgtggaaggagggattacacttgc 435 ||||||||||||||||||||||||||||| ||||||| |||||||||||| | ||||| Sbjct: 350 cccttggacaacgccttgtgtttgccatgctgtctttgttgaaggagggattgcgcttgc 409 Query: 436 aatcctgacagcaatatttcatggtgttgacccaagatcatcgtttcttattggagaagg 495 ||| || || |||||||||||||||||||| || ||| | || || || ||||||||||| Sbjct: 410 aattctcaccgcaatatttcatggtgttgatcccagaacgtctttcctgattggagaagg 469 Query: 496 cctggtgtttagttggtggttatgtggtacctatactggcattttccgtcaggaactcca 555 ||||||| || |||||||| |||||||| ||||| ||||| || || || ||||| || Sbjct: 470 tttggtgttcagctggtggttgtgtggtacttatacgggcatctttcgccaagaacttca 529 Query: 556 gaagagatatcatctcaagaactccccgtgcgacccatgcatggctcactgctgcctgca 615 || || ||| ||||||||||| || || || ||||| ||||||| || |||||| |||| Sbjct: 530 gaggaaataccatctcaagaattctccatgtgacccttgcatggtccattgctgcttgca 589 Query: 616 ctggtgtgccaactgccaggagcaccgcgagaggaggggccgcctggccgaccacagcgc 675 |||||| || || || ||||||||||| || |||| ||| || || || || ||||||| Sbjct: 590 ctggtgcgcgaattgtcaggagcaccgtgaaaggacggggcggcttgcagagaacagcgc 649 Query: 676 tgtgcccatgactgttgt 693 ||||| ||||| ||||| Sbjct: 650 ggtgccaatgaccgttgt 667
>gb|AY572543.1|AY572542S2 Triticum monococcum cultivar PI277133 unknown gene, exons 3, 4, and complete cds Length = 1153 Score = 456 bits (230), Expect = e-125 Identities = 257/266 (96%) Strand = Plus / Plus Query: 309 gtcgcactggattgttctgtccttgtgtactgtttgggcgcaacgttgaggccctcagag 368 ||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||| Sbjct: 9 gtcgcactggattgttctgtccttgcgtgctgtttgggcgcaatgttgaggccctcagag 68 Query: 369 aggatataccttggacaacgccttgtgtttgccatgccatctttgtggaaggagggatta 428 ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 69 aggatatcccttggacaacgccttgtgtttgccatgctatctttgtggaaggagggatta 128 Query: 429 cacttgcaatcctgacagcaatatttcatggtgttgacccaagatcatcgtttcttattg 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 cacttgcaatcctgacagcaatatttcatggtgttgacccaagatcatcgtttcttattg 188 Query: 489 gagaaggcctggtgtttagttggtggttatgtggtacctatactggcattttccgtcagg 548 ||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||| | Sbjct: 189 gagaaggtctggtgtttagttggtggctgtgtggtacctatactggcattttccgtcaag 248 Query: 549 aactccagaagagatatcatctcaag 574 |||||||||||||||||||||||||| Sbjct: 249 aactccagaagagatatcatctcaag 274 Score = 402 bits (203), Expect = e-108 Identities = 306/340 (90%), Gaps = 9/340 (2%) Strand = Plus / Plus Query: 573 agaactccccgtgcgacccatgcatggctcactgctgcctgcactggtgtgccaactgcc 632 |||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 814 agaactccccatgcgacccatgcatggcccactgctgcctgcactggtgcgccaactgcc 873 Query: 633 aggagcaccgcgagaggaggggccgcctggccgaccacagcgctgtgcccatgactgttg 692 ||||||||||||||||||| |||| |||||||||||||||||| |||||||||| || | Sbjct: 874 aggagcaccgcgagaggagaggccacctggccgaccacagcgccatgcccatgaccgtcg 933 Query: 693 tcaacccgcccccggtccaggagatgagcatgtcagagaaccgcg------acgcccctg 746 ||||||||||||| || || |||||||||||||||||||||| || |||||||| Sbjct: 934 tcaacccgccccccgtgcaagagatgagcatgtcagagaaccacgccgcccccgcccctg 993 Query: 747 cccctgccaacccggag---aacggatcatccaacaaggctgagctcgaagcgcgcaaga 803 ||||||||||||||||| || ||| |||| |||| ||||||||| ||||||||||||| Sbjct: 994 cccctgccaacccggagaccaatggagcatcgaacagggctgagctggaagcgcgcaaga 1053 Query: 804 gcgaccacgacgatgtggaggtcatccctctatagaccaaccaaagaaagaaaaataaag 863 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1054 gcgaccacgacgacgtcgaggtcatccctctatagaccaaccaaagaaagaaaaataaag 1113 Query: 864 ccaacggagtttcgatatacagaagaatgttaggatagca 903 |||| ||| ||| ||||||| ||||||||||||||||||| Sbjct: 1114 ccaatggaattttgatataccgaagaatgttaggatagca 1153
>gb|AY572537.1|AY572536S2 Triticum monococcum cultivar PI355532 unknown gene, exons 3, 4, and complete cds Length = 1153 Score = 448 bits (226), Expect = e-122 Identities = 256/266 (96%) Strand = Plus / Plus Query: 309 gtcgcactggattgttctgtccttgtgtactgtttgggcgcaacgttgaggccctcagag 368 ||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||| Sbjct: 9 gtcgcactggattgttctgtccttgcgtgctgtttgggcgcaatgttgaggccctcagag 68 Query: 369 aggatataccttggacaacgccttgtgtttgccatgccatctttgtggaaggagggatta 428 ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 69 aggatatcccttggacaacgccttgtgtttgccatgctatctttgtggaaggagggatta 128 Query: 429 cacttgcaatcctgacagcaatatttcatggtgttgacccaagatcatcgtttcttattg 488 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 129 cacttgcaatcctgacagcaatatttcatggtgttgacccgagatcatcgtttcttattg 188 Query: 489 gagaaggcctggtgtttagttggtggttatgtggtacctatactggcattttccgtcagg 548 ||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||| | Sbjct: 189 gagaaggtctggtgtttagttggtggctgtgtggtacctatactggcattttccgtcaag 248 Query: 549 aactccagaagagatatcatctcaag 574 |||||||||||||||||||||||||| Sbjct: 249 aactccagaagagatatcatctcaag 274 Score = 402 bits (203), Expect = e-108 Identities = 306/340 (90%), Gaps = 9/340 (2%) Strand = Plus / Plus Query: 573 agaactccccgtgcgacccatgcatggctcactgctgcctgcactggtgtgccaactgcc 632 |||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 814 agaactccccatgcgacccatgcatggcccactgctgcctgcactggtgcgccaactgcc 873 Query: 633 aggagcaccgcgagaggaggggccgcctggccgaccacagcgctgtgcccatgactgttg 692 ||||||||||||||||||| |||| |||||||||||||||||| |||||||||| || | Sbjct: 874 aggagcaccgcgagaggagaggccacctggccgaccacagcgccatgcccatgaccgtcg 933 Query: 693 tcaacccgcccccggtccaggagatgagcatgtcagagaaccgcg------acgcccctg 746 ||||||||||||| || || |||||||||||||||||||||| || |||||||| Sbjct: 934 tcaacccgccccccgtgcaagagatgagcatgtcagagaaccacgccgcccccgcccctg 993 Query: 747 cccctgccaacccggag---aacggatcatccaacaaggctgagctcgaagcgcgcaaga 803 ||||||||||||||||| || ||| |||| |||| ||||||||| ||||||||||||| Sbjct: 994 cccctgccaacccggagaccaatggagcatcgaacagggctgagctggaagcgcgcaaga 1053 Query: 804 gcgaccacgacgatgtggaggtcatccctctatagaccaaccaaagaaagaaaaataaag 863 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1054 gcgaccacgacgacgtcgaggtcatccctctatagaccaaccaaagaaagaaaaataaag 1113 Query: 864 ccaacggagtttcgatatacagaagaatgttaggatagca 903 |||| ||| ||| ||||||| ||||||||||||||||||| Sbjct: 1114 ccaatggaattttgatataccgaagaatgttaggatagca 1153
>gb|AY572536.1|AY572536S1 Triticum monococcum cultivar PI355532 unknown gene, exons 1 and 2 Length = 402 Score = 291 bits (147), Expect = 3e-75 Identities = 147/147 (100%) Strand = Plus / Plus Query: 47 tagcagtgtccgccgggtcgccgccgccggcaagcaatggcggaggagggccacccgtcc 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34 tagcagtgtccgccgggtcgccgccgccggcaagcaatggcggaggagggccacccgtcc 93 Query: 107 cgctacgtcaagctcaccaaggaccaggacgcccccggcgaggacatccgccccggcgag 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 cgctacgtcaagctcaccaaggaccaggacgcccccggcgaggacatccgccccggcgag 153 Query: 167 ctcaaccagcccgtccacgtcccccag 193 ||||||||||||||||||||||||||| Sbjct: 154 ctcaaccagcccgtccacgtcccccag 180 Score = 214 bits (108), Expect = 5e-52 Identities = 117/120 (97%) Strand = Plus / Plus Query: 191 cagctcgagggcaggaggtgcggcgagtgcggccaggtcctcccggagagctacgagccg 250 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 cagctcgagggccggaggtgcggcgagtgcggccaggtcctcccggagagctacgagccg 313 Query: 251 cccgccgacgagccgtggaccaccgggatcttcggctgcaccgacgaccccgagagctgt 310 |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 314 cccgccgacgagccgtggtccaccgggatcttcgggtgcaccgacgaccccgagagctgt 373
>gb|AY572542.1|AY572542S1 Triticum monococcum cultivar PI277133 unknown gene, exons 1 and 2 Length = 405 Score = 291 bits (147), Expect = 3e-75 Identities = 147/147 (100%) Strand = Plus / Plus Query: 47 tagcagtgtccgccgggtcgccgccgccggcaagcaatggcggaggagggccacccgtcc 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34 tagcagtgtccgccgggtcgccgccgccggcaagcaatggcggaggagggccacccgtcc 93 Query: 107 cgctacgtcaagctcaccaaggaccaggacgcccccggcgaggacatccgccccggcgag 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 cgctacgtcaagctcaccaaggaccaggacgcccccggcgaggacatccgccccggcgag 153 Query: 167 ctcaaccagcccgtccacgtcccccag 193 ||||||||||||||||||||||||||| Sbjct: 154 ctcaaccagcccgtccacgtcccccag 180 Score = 214 bits (108), Expect = 5e-52 Identities = 117/120 (97%) Strand = Plus / Plus Query: 191 cagctcgagggcaggaggtgcggcgagtgcggccaggtcctcccggagagctacgagccg 250 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 cagctcgagggccggaggtgcggcgagtgcggccaggtcctcccggagagctacgagccg 313 Query: 251 cccgccgacgagccgtggaccaccgggatcttcggctgcaccgacgaccccgagagctgt 310 |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 314 cccgccgacgagccgtggtccaccgggatcttcgggtgcaccgacgaccccgagagctgt 373
>ref|NM_001071909.1| Oryza sativa (japonica cultivar-group) Os10g0560200 (Os10g0560200) mRNA, complete cds Length = 1081 Score = 256 bits (129), Expect = 2e-64 Identities = 417/513 (81%) Strand = Plus / Plus Query: 145 cgaggacatccgccccggcgagctcaaccagcccgtccacgtcccccagctcgagggcag 204 ||||||||||||||||||||||||||||| ||| | |||| |||| ||||| ||| || Sbjct: 197 cgaggacatccgccccggcgagctcaacctgccggcccacttcccgcagctggagcagag 256 Query: 205 gaggtgcggcgagtgcggccaggtcctcccggagagctacgagccgcccgccgacgagcc 264 ||||||| |||||||||| ||| || ||||||||||||||| |||| || |||||||| Sbjct: 257 gaggtgctgcgagtgcgggcagcagctgccggagagctacgaggcgccggcggacgagcc 316 Query: 265 gtggaccaccgggatcttcggctgcaccgacgaccccgagagctgtcgcactggattgtt 324 |||||||||||| |||| ||| ||| |||| ||| |||||||||| | ||||||| || Sbjct: 317 gtggaccaccggcatctgcggatgcgccgaggacaccgagagctgctggactggatcatt 376 Query: 325 ctgtccttgtgtactgtttgggcgcaacgttgaggccctcagagaggatataccttggac 384 || |||||||| |||||||| | || ||||||||||| ||||| ||||| || ||||| Sbjct: 377 cttcccttgtgtgctgtttggacataatgttgaggccctaagagaagatatcccatggac 436 Query: 385 aacgccttgtgtttgccatgccatctttgtggaaggagggattacacttgcaatcctgac 444 || ||||| ||||||||| | | ||| ||||| || ||| || | |||||||| || Sbjct: 437 tacaccttgcacttgccatgctgtttgtgttgaaggtggcattgcattagcaatcctaac 496 Query: 445 agcaatatttcatggtgttgacccaagatcatcgtttcttattggagaaggcctggtgtt 504 || ||||||| |||| |||| ||||| |||| | | ||||| ||||| |||||||| Sbjct: 497 agtgatatttcctggtattgatccaagcacatcaatcttgattggtgaaggactggtgtt 556 Query: 505 tagttggtggttatgtggtacctatactggcattttccgtcaggaactccagaagagata 564 |||||||||||||| || |||||||||||| ||||| ||||| ||||||||| | ||| Sbjct: 557 tagttggtggttatttgctacctatactggaatttttcgtcaacaactccagagaaaata 616 Query: 565 tcatctcaagaactccccgtgcgacccatgcatggctcactgctgcctgcactggtgtgc 624 |||||||||| | || ||||| || || ||| ||| || ||||||||||||||||| || Sbjct: 617 tcatctcaaggattcaccgtgtgatccttgcctggtccattgctgcctgcactggtgcgc 676 Query: 625 caactgccaggagcaccgcgagaggaggggccg 657 ||||| |||||||| || || |||| |||||| Sbjct: 677 gaactgtcaggagcatcgagaaaggaagggccg 709
>dbj|AK069913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037N12, full insert sequence Length = 1082 Score = 256 bits (129), Expect = 2e-64 Identities = 417/513 (81%) Strand = Plus / Plus Query: 145 cgaggacatccgccccggcgagctcaaccagcccgtccacgtcccccagctcgagggcag 204 ||||||||||||||||||||||||||||| ||| | |||| |||| ||||| ||| || Sbjct: 198 cgaggacatccgccccggcgagctcaacctgccggcccacttcccgcagctggagcagag 257 Query: 205 gaggtgcggcgagtgcggccaggtcctcccggagagctacgagccgcccgccgacgagcc 264 ||||||| |||||||||| ||| || ||||||||||||||| |||| || |||||||| Sbjct: 258 gaggtgctgcgagtgcgggcagcagctgccggagagctacgaggcgccggcggacgagcc 317 Query: 265 gtggaccaccgggatcttcggctgcaccgacgaccccgagagctgtcgcactggattgtt 324 |||||||||||| |||| ||| ||| |||| ||| |||||||||| | ||||||| || Sbjct: 318 gtggaccaccggcatctgcggatgcgccgaggacaccgagagctgctggactggatcatt 377 Query: 325 ctgtccttgtgtactgtttgggcgcaacgttgaggccctcagagaggatataccttggac 384 || |||||||| |||||||| | || ||||||||||| ||||| ||||| || ||||| Sbjct: 378 cttcccttgtgtgctgtttggacataatgttgaggccctaagagaagatatcccatggac 437 Query: 385 aacgccttgtgtttgccatgccatctttgtggaaggagggattacacttgcaatcctgac 444 || ||||| ||||||||| | | ||| ||||| || ||| || | |||||||| || Sbjct: 438 tacaccttgcacttgccatgctgtttgtgttgaaggtggcattgcattagcaatcctaac 497 Query: 445 agcaatatttcatggtgttgacccaagatcatcgtttcttattggagaaggcctggtgtt 504 || ||||||| |||| |||| ||||| |||| | | ||||| ||||| |||||||| Sbjct: 498 agtgatatttcctggtattgatccaagcacatcaatcttgattggtgaaggactggtgtt 557 Query: 505 tagttggtggttatgtggtacctatactggcattttccgtcaggaactccagaagagata 564 |||||||||||||| || |||||||||||| ||||| ||||| ||||||||| | ||| Sbjct: 558 tagttggtggttatttgctacctatactggaatttttcgtcaacaactccagagaaaata 617 Query: 565 tcatctcaagaactccccgtgcgacccatgcatggctcactgctgcctgcactggtgtgc 624 |||||||||| | || ||||| || || ||| ||| || ||||||||||||||||| || Sbjct: 618 tcatctcaaggattcaccgtgtgatccttgcctggtccattgctgcctgcactggtgcgc 677 Query: 625 caactgccaggagcaccgcgagaggaggggccg 657 ||||| |||||||| || || |||| |||||| Sbjct: 678 gaactgtcaggagcatcgagaaaggaagggccg 710
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 224 bits (113), Expect = 5e-55 Identities = 224/261 (85%) Strand = Plus / Plus Query: 314 actggattgttctgtccttgtgtactgtttgggcgcaacgttgaggccctcagagaggat 373 ||||| ||||||||||||||||| || ||||| ||||| |||||||||||||||||||| Sbjct: 48575 actgggttgttctgtccttgtgttctttttggacgcaatattgaggccctcagagaggat 48634 Query: 374 ataccttggacaacgccttgtgtttgccatgccatctttgtggaaggagggattacactt 433 || ||||||||||||||||||||||||||||| ||||||| |||||||||||| | ||| Sbjct: 48635 atcccttggacaacgccttgtgtttgccatgctgtctttgttgaaggagggattgcgctt 48694 Query: 434 gcaatcctgacagcaatatttcatggtgttgacccaagatcatcgtttcttattggagaa 493 ||||| || || |||||||||||||||||||| || ||| | || || || ||||||||| Sbjct: 48695 gcaattctcaccgcaatatttcatggtgttgatcccagaacgtctttcctgattggagaa 48754 Query: 494 ggcctggtgtttagttggtggttatgtggtacctatactggcattttccgtcaggaactc 553 || ||||||| || |||||||| |||||||| ||||| ||||| || || || ||||| Sbjct: 48755 ggtttggtgttcagctggtggttgtgtggtacttatacgggcatctttcgccaagaactt 48814 Query: 554 cagaagagatatcatctcaag 574 |||| || ||| ||||||||| Sbjct: 48815 cagaggaaataccatctcaag 48835 Score = 149 bits (75), Expect = 3e-32 Identities = 99/107 (92%) Strand = Plus / Plus Query: 191 cagctcgagggcaggaggtgcggcgagtgcggccaggtcctcccggagagctacgagccg 250 ||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||| Sbjct: 47833 cagctcgagggcaggaggtgcagcgagtgcggccaggtcctgccggaatcctacgagccc 47892 Query: 251 cccgccgacgagccgtggaccaccgggatcttcggctgcaccgacga 297 |||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 47893 cccgccgacgagccctggaccaccgggatcttcgcctgcaccgacga 47939 Score = 91.7 bits (46), Expect = 5e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 136 cgcccccggcgaggacatccgccccggcgagctcaaccagcccgtccacgtccc 189 |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 47706 cgcccccgccgaggacatccgccccggcgagctcaaccagccagtccacgtccc 47759 Score = 46.1 bits (23), Expect = 0.28 Identities = 86/107 (80%) Strand = Plus / Plus Query: 587 gacccatgcatggctcactgctgcctgcactggtgtgccaactgccaggagcaccgcgag 646 ||||| ||||||| || |||||| |||||||||| || || || ||||||||||| || Sbjct: 49377 gacccttgcatggtccattgctgcttgcactggtgcgcgaattgtcaggagcaccgtgaa 49436 Query: 647 aggaggggccgcctggccgaccacagcgctgtgcccatgactgttgt 693 |||| ||| || || || || ||||||| ||||| ||||| ||||| Sbjct: 49437 aggacggggcggcttgcagagaacagcgcggtgccaatgaccgttgt 49483
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 224 bits (113), Expect = 5e-55 Identities = 224/261 (85%) Strand = Plus / Plus Query: 314 actggattgttctgtccttgtgtactgtttgggcgcaacgttgaggccctcagagaggat 373 ||||| ||||||||||||||||| || ||||| ||||| |||||||||||||||||||| Sbjct: 114575 actgggttgttctgtccttgtgttctttttggacgcaatattgaggccctcagagaggat 114634 Query: 374 ataccttggacaacgccttgtgtttgccatgccatctttgtggaaggagggattacactt 433 || ||||||||||||||||||||||||||||| ||||||| |||||||||||| | ||| Sbjct: 114635 atcccttggacaacgccttgtgtttgccatgctgtctttgttgaaggagggattgcgctt 114694 Query: 434 gcaatcctgacagcaatatttcatggtgttgacccaagatcatcgtttcttattggagaa 493 ||||| || || |||||||||||||||||||| || ||| | || || || ||||||||| Sbjct: 114695 gcaattctcaccgcaatatttcatggtgttgatcccagaacgtctttcctgattggagaa 114754 Query: 494 ggcctggtgtttagttggtggttatgtggtacctatactggcattttccgtcaggaactc 553 || ||||||| || |||||||| |||||||| ||||| ||||| || || || ||||| Sbjct: 114755 ggtttggtgttcagctggtggttgtgtggtacttatacgggcatctttcgccaagaactt 114814 Query: 554 cagaagagatatcatctcaag 574 |||| || ||| ||||||||| Sbjct: 114815 cagaggaaataccatctcaag 114835 Score = 149 bits (75), Expect = 3e-32 Identities = 99/107 (92%) Strand = Plus / Plus Query: 191 cagctcgagggcaggaggtgcggcgagtgcggccaggtcctcccggagagctacgagccg 250 ||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||| Sbjct: 113833 cagctcgagggcaggaggtgcagcgagtgcggccaggtcctgccggaatcctacgagccc 113892 Query: 251 cccgccgacgagccgtggaccaccgggatcttcggctgcaccgacga 297 |||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 113893 cccgccgacgagccctggaccaccgggatcttcgcctgcaccgacga 113939 Score = 91.7 bits (46), Expect = 5e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 136 cgcccccggcgaggacatccgccccggcgagctcaaccagcccgtccacgtccc 189 |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 113706 cgcccccgccgaggacatccgccccggcgagctcaaccagccagtccacgtccc 113759 Score = 46.1 bits (23), Expect = 0.28 Identities = 86/107 (80%) Strand = Plus / Plus Query: 587 gacccatgcatggctcactgctgcctgcactggtgtgccaactgccaggagcaccgcgag 646 ||||| ||||||| || |||||| |||||||||| || || || ||||||||||| || Sbjct: 115377 gacccttgcatggtccattgctgcttgcactggtgcgcgaattgtcaggagcaccgtgaa 115436 Query: 647 aggaggggccgcctggccgaccacagcgctgtgcccatgactgttgt 693 |||| ||| || || || || ||||||| ||||| ||||| ||||| Sbjct: 115437 aggacggggcggcttgcagagaacagcgcggtgccaatgaccgttgt 115483
>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0079B22, from chromosome 3, complete sequence Length = 125217 Score = 224 bits (113), Expect = 5e-55 Identities = 224/261 (85%) Strand = Plus / Minus Query: 314 actggattgttctgtccttgtgtactgtttgggcgcaacgttgaggccctcagagaggat 373 ||||| ||||||||||||||||| || ||||| ||||| |||||||||||||||||||| Sbjct: 10643 actgggttgttctgtccttgtgttctttttggacgcaatattgaggccctcagagaggat 10584 Query: 374 ataccttggacaacgccttgtgtttgccatgccatctttgtggaaggagggattacactt 433 || ||||||||||||||||||||||||||||| ||||||| |||||||||||| | ||| Sbjct: 10583 atcccttggacaacgccttgtgtttgccatgctgtctttgttgaaggagggattgcgctt 10524 Query: 434 gcaatcctgacagcaatatttcatggtgttgacccaagatcatcgtttcttattggagaa 493 ||||| || || |||||||||||||||||||| || ||| | || || || ||||||||| Sbjct: 10523 gcaattctcaccgcaatatttcatggtgttgatcccagaacgtctttcctgattggagaa 10464 Query: 494 ggcctggtgtttagttggtggttatgtggtacctatactggcattttccgtcaggaactc 553 || ||||||| || |||||||| |||||||| ||||| ||||| || || || ||||| Sbjct: 10463 ggtttggtgttcagctggtggttgtgtggtacttatacgggcatctttcgccaagaactt 10404 Query: 554 cagaagagatatcatctcaag 574 |||| || ||| ||||||||| Sbjct: 10403 cagaggaaataccatctcaag 10383 Score = 149 bits (75), Expect = 3e-32 Identities = 99/107 (92%) Strand = Plus / Minus Query: 191 cagctcgagggcaggaggtgcggcgagtgcggccaggtcctcccggagagctacgagccg 250 ||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||| Sbjct: 11385 cagctcgagggcaggaggtgcagcgagtgcggccaggtcctgccggaatcctacgagccc 11326 Query: 251 cccgccgacgagccgtggaccaccgggatcttcggctgcaccgacga 297 |||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 11325 cccgccgacgagccctggaccaccgggatcttcgcctgcaccgacga 11279 Score = 91.7 bits (46), Expect = 5e-15 Identities = 52/54 (96%) Strand = Plus / Minus Query: 136 cgcccccggcgaggacatccgccccggcgagctcaaccagcccgtccacgtccc 189 |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 11512 cgcccccgccgaggacatccgccccggcgagctcaaccagccagtccacgtccc 11459 Score = 46.1 bits (23), Expect = 0.28 Identities = 86/107 (80%) Strand = Plus / Minus Query: 587 gacccatgcatggctcactgctgcctgcactggtgtgccaactgccaggagcaccgcgag 646 ||||| ||||||| || |||||| |||||||||| || || || ||||||||||| || Sbjct: 9841 gacccttgcatggtccattgctgcttgcactggtgcgcgaattgtcaggagcaccgtgaa 9782 Query: 647 aggaggggccgcctggccgaccacagcgctgtgcccatgactgttgt 693 |||| ||| || || || || ||||||| ||||| ||||| ||||| Sbjct: 9781 aggacggggcggcttgcagagaacagcgcggtgccaatgaccgttgt 9735
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 224 bits (113), Expect = 5e-55 Identities = 224/261 (85%) Strand = Plus / Minus Query: 314 actggattgttctgtccttgtgtactgtttgggcgcaacgttgaggccctcagagaggat 373 ||||| ||||||||||||||||| || ||||| ||||| |||||||||||||||||||| Sbjct: 148043 actgggttgttctgtccttgtgttctttttggacgcaatattgaggccctcagagaggat 147984 Query: 374 ataccttggacaacgccttgtgtttgccatgccatctttgtggaaggagggattacactt 433 || ||||||||||||||||||||||||||||| ||||||| |||||||||||| | ||| Sbjct: 147983 atcccttggacaacgccttgtgtttgccatgctgtctttgttgaaggagggattgcgctt 147924 Query: 434 gcaatcctgacagcaatatttcatggtgttgacccaagatcatcgtttcttattggagaa 493 ||||| || || |||||||||||||||||||| || ||| | || || || ||||||||| Sbjct: 147923 gcaattctcaccgcaatatttcatggtgttgatcccagaacgtctttcctgattggagaa 147864 Query: 494 ggcctggtgtttagttggtggttatgtggtacctatactggcattttccgtcaggaactc 553 || ||||||| || |||||||| |||||||| ||||| ||||| || || || ||||| Sbjct: 147863 ggtttggtgttcagctggtggttgtgtggtacttatacgggcatctttcgccaagaactt 147804 Query: 554 cagaagagatatcatctcaag 574 |||| || ||| ||||||||| Sbjct: 147803 cagaggaaataccatctcaag 147783 Score = 149 bits (75), Expect = 3e-32 Identities = 99/107 (92%) Strand = Plus / Minus Query: 191 cagctcgagggcaggaggtgcggcgagtgcggccaggtcctcccggagagctacgagccg 250 ||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||| Sbjct: 148785 cagctcgagggcaggaggtgcagcgagtgcggccaggtcctgccggaatcctacgagccc 148726 Query: 251 cccgccgacgagccgtggaccaccgggatcttcggctgcaccgacga 297 |||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 148725 cccgccgacgagccctggaccaccgggatcttcgcctgcaccgacga 148679 Score = 91.7 bits (46), Expect = 5e-15 Identities = 52/54 (96%) Strand = Plus / Minus Query: 136 cgcccccggcgaggacatccgccccggcgagctcaaccagcccgtccacgtccc 189 |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 148912 cgcccccgccgaggacatccgccccggcgagctcaaccagccagtccacgtccc 148859 Score = 46.1 bits (23), Expect = 0.28 Identities = 86/107 (80%) Strand = Plus / Minus Query: 587 gacccatgcatggctcactgctgcctgcactggtgtgccaactgccaggagcaccgcgag 646 ||||| ||||||| || |||||| |||||||||| || || || ||||||||||| || Sbjct: 147241 gacccttgcatggtccattgctgcttgcactggtgcgcgaattgtcaggagcaccgtgaa 147182 Query: 647 aggaggggccgcctggccgaccacagcgctgtgcccatgactgttgt 693 |||| ||| || || || || ||||||| ||||| ||||| ||||| Sbjct: 147181 aggacggggcggcttgcagagaacagcgcggtgccaatgaccgttgt 147135
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 107 bits (54), Expect = 9e-20 Identities = 198/246 (80%) Strand = Plus / Minus Query: 329 ccttgtgtactgtttgggcgcaacgttgaggccctcagagaggatataccttggacaacg 388 |||||||| |||||||| | || ||||||||||| ||||| ||||| || ||||| || Sbjct: 21543902 ccttgtgtgctgtttggacataatgttgaggccctaagagaagatatcccatggactaca 21543843 Query: 389 ccttgtgtttgccatgccatctttgtggaaggagggattacacttgcaatcctgacagca 448 ||||| ||||||||| | | ||| ||||| || ||| || | |||||||| |||| Sbjct: 21543842 ccttgcacttgccatgctgtttgtgttgaaggtggcattgcattagcaatcctaacagtg 21543783 Query: 449 atatttcatggtgttgacccaagatcatcgtttcttattggagaaggcctggtgtttagt 508 ||||||| |||| |||| ||||| |||| | | ||||| ||||| |||||||||||| Sbjct: 21543782 atatttcctggtattgatccaagcacatcaatcttgattggtgaaggactggtgtttagt 21543723 Query: 509 tggtggttatgtggtacctatactggcattttccgtcaggaactccagaagagatatcat 568 |||||||||| || |||||||||||| ||||| ||||| ||||||||| | ||||||| Sbjct: 21543722 tggtggttatttgctacctatactggaatttttcgtcaacaactccagagaaaatatcat 21543663 Query: 569 ctcaag 574 |||||| Sbjct: 21543662 ctcaag 21543657 Score = 95.6 bits (48), Expect = 3e-16 Identities = 93/108 (86%) Strand = Plus / Minus Query: 203 aggaggtgcggcgagtgcggccaggtcctcccggagagctacgagccgcccgccgacgag 262 ||||||||| |||||||||| ||| || ||||||||||||||| |||| || |||||| Sbjct: 21545874 aggaggtgctgcgagtgcgggcagcagctgccggagagctacgaggcgccggcggacgag 21545815 Query: 263 ccgtggaccaccgggatcttcggctgcaccgacgaccccgagagctgt 310 |||||||||||||| |||| ||| ||| |||| ||| ||||||||||| Sbjct: 21545814 ccgtggaccaccggcatctgcggatgcgccgaggacaccgagagctgt 21545767 Score = 58.0 bits (29), Expect = 7e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 145 cgaggacatccgccccggcgagctcaacc 173 ||||||||||||||||||||||||||||| Sbjct: 21546064 cgaggacatccgccccggcgagctcaacc 21546036 Score = 50.1 bits (25), Expect = 0.018 Identities = 46/53 (86%) Strand = Plus / Minus Query: 605 tgctgcctgcactggtgtgccaactgccaggagcaccgcgagaggaggggccg 657 ||||||||||||||||| || ||||| |||||||| || || |||| |||||| Sbjct: 21543211 tgctgcctgcactggtgcgcgaactgtcaggagcatcgagaaaggaagggccg 21543159
>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete sequence Length = 144191 Score = 107 bits (54), Expect = 9e-20 Identities = 198/246 (80%) Strand = Plus / Plus Query: 329 ccttgtgtactgtttgggcgcaacgttgaggccctcagagaggatataccttggacaacg 388 |||||||| |||||||| | || ||||||||||| ||||| ||||| || ||||| || Sbjct: 66155 ccttgtgtgctgtttggacataatgttgaggccctaagagaagatatcccatggactaca 66214 Query: 389 ccttgtgtttgccatgccatctttgtggaaggagggattacacttgcaatcctgacagca 448 ||||| ||||||||| | | ||| ||||| || ||| || | |||||||| |||| Sbjct: 66215 ccttgcacttgccatgctgtttgtgttgaaggtggcattgcattagcaatcctaacagtg 66274 Query: 449 atatttcatggtgttgacccaagatcatcgtttcttattggagaaggcctggtgtttagt 508 ||||||| |||| |||| ||||| |||| | | ||||| ||||| |||||||||||| Sbjct: 66275 atatttcctggtattgatccaagcacatcaatcttgattggtgaaggactggtgtttagt 66334 Query: 509 tggtggttatgtggtacctatactggcattttccgtcaggaactccagaagagatatcat 568 |||||||||| || |||||||||||| ||||| ||||| ||||||||| | ||||||| Sbjct: 66335 tggtggttatttgctacctatactggaatttttcgtcaacaactccagagaaaatatcat 66394 Query: 569 ctcaag 574 |||||| Sbjct: 66395 ctcaag 66400 Score = 95.6 bits (48), Expect = 3e-16 Identities = 93/108 (86%) Strand = Plus / Plus Query: 203 aggaggtgcggcgagtgcggccaggtcctcccggagagctacgagccgcccgccgacgag 262 ||||||||| |||||||||| ||| || ||||||||||||||| |||| || |||||| Sbjct: 64183 aggaggtgctgcgagtgcgggcagcagctgccggagagctacgaggcgccggcggacgag 64242 Query: 263 ccgtggaccaccgggatcttcggctgcaccgacgaccccgagagctgt 310 |||||||||||||| |||| ||| ||| |||| ||| ||||||||||| Sbjct: 64243 ccgtggaccaccggcatctgcggatgcgccgaggacaccgagagctgt 64290 Score = 58.0 bits (29), Expect = 7e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 145 cgaggacatccgccccggcgagctcaacc 173 ||||||||||||||||||||||||||||| Sbjct: 63993 cgaggacatccgccccggcgagctcaacc 64021 Score = 50.1 bits (25), Expect = 0.018 Identities = 46/53 (86%) Strand = Plus / Plus Query: 605 tgctgcctgcactggtgtgccaactgccaggagcaccgcgagaggaggggccg 657 ||||||||||||||||| || ||||| |||||||| || || |||| |||||| Sbjct: 66846 tgctgcctgcactggtgcgcgaactgtcaggagcatcgagaaaggaagggccg 66898
>ref|NM_201961.1| Arabidopsis thaliana unknown protein (AT2G45010) mRNA, complete cds Length = 1698 Score = 60.0 bits (30), Expect = 2e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 539 ttccgtcaggaactccagaagagatatcatctcaagaactccccgtgcgacccatgcatg 598 ||||| || ||||||||||||| ||||||||||||||| | || || || | |||||| Sbjct: 1181 ttccgccaagaactccagaagaaatatcatctcaagaatgcgccttgtgatcattgcatg 1240 Query: 599 gctcactgctgcctgcactggtgtgc 624 | |||||| ||| ||||||||||||| Sbjct: 1241 gttcactgttgcttgcactggtgtgc 1266
>ref|NM_130066.2| Arabidopsis thaliana unknown protein (AT2G45010) mRNA, complete cds Length = 1114 Score = 60.0 bits (30), Expect = 2e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 539 ttccgtcaggaactccagaagagatatcatctcaagaactccccgtgcgacccatgcatg 598 ||||| || ||||||||||||| ||||||||||||||| | || || || | |||||| Sbjct: 595 ttccgccaagaactccagaagaaatatcatctcaagaatgcgccttgtgatcattgcatg 654 Query: 599 gctcactgctgcctgcactggtgtgc 624 | |||||| ||| ||||||||||||| Sbjct: 655 gttcactgttgcttgcactggtgtgc 680
>gb|BT000899.1| Arabidopsis thaliana clone C105033 unknown protein (At2g45010) mRNA, complete cds Length = 766 Score = 60.0 bits (30), Expect = 2e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 539 ttccgtcaggaactccagaagagatatcatctcaagaactccccgtgcgacccatgcatg 598 ||||| || ||||||||||||| ||||||||||||||| | || || || | |||||| Sbjct: 460 ttccgccaagaactccagaagaaatatcatctcaagaatgcgccttgtgatcattgcatg 519 Query: 599 gctcactgctgcctgcactggtgtgc 624 | |||||| ||| ||||||||||||| Sbjct: 520 gttcactgttgcttgcactggtgtgc 545
>gb|BT000360.1| Arabidopsis thaliana unknown protein (At2g45010) mRNA, complete cds Length = 758 Score = 60.0 bits (30), Expect = 2e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 539 ttccgtcaggaactccagaagagatatcatctcaagaactccccgtgcgacccatgcatg 598 ||||| || ||||||||||||| ||||||||||||||| | || || || | |||||| Sbjct: 460 ttccgccaagaactccagaagaaatatcatctcaagaatgcgccttgtgatcattgcatg 519 Query: 599 gctcactgctgcctgcactggtgtgc 624 | |||||| ||| ||||||||||||| Sbjct: 520 gttcactgttgcttgcactggtgtgc 545
>gb|AF327424.1| Arabidopsis thaliana unknown protein (At2g45010) mRNA, partial cds Length = 847 Score = 60.0 bits (30), Expect = 2e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 539 ttccgtcaggaactccagaagagatatcatctcaagaactccccgtgcgacccatgcatg 598 ||||| || ||||||||||||| ||||||||||||||| | || || || | |||||| Sbjct: 593 ttccgccaagaactccagaagaaatatcatctcaagaatgcgccttgtgatcattgcatg 652 Query: 599 gctcactgctgcctgcactggtgtgc 624 | |||||| ||| ||||||||||||| Sbjct: 653 gttcactgttgcttgcactggtgtgc 678
>gb|AY120733.1| Arabidopsis thaliana unknown protein (At2g45010) mRNA, complete cds Length = 995 Score = 60.0 bits (30), Expect = 2e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 539 ttccgtcaggaactccagaagagatatcatctcaagaactccccgtgcgacccatgcatg 598 ||||| || ||||||||||||| ||||||||||||||| | || || || | |||||| Sbjct: 562 ttccgccaagaactccagaagaaatatcatctcaagaatgcgccttgtgatcattgcatg 621 Query: 599 gctcactgctgcctgcactggtgtgc 624 | |||||| ||| ||||||||||||| Sbjct: 622 gttcactgttgcttgcactggtgtgc 647
>gb|AY087375.1| Arabidopsis thaliana clone 34688 mRNA, complete sequence Length = 1046 Score = 60.0 bits (30), Expect = 2e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 539 ttccgtcaggaactccagaagagatatcatctcaagaactccccgtgcgacccatgcatg 598 ||||| || ||||||||||||| ||||||||||||||| | || || || | |||||| Sbjct: 595 ttccgccaagaactccagaagaaatatcatctcaagaatgcgccttgtgatcattgcatg 654 Query: 599 gctcactgctgcctgcactggtgtgc 624 | |||||| ||| ||||||||||||| Sbjct: 655 gttcactgttgcttgcactggtgtgc 680
>dbj|AK118360.1| Arabidopsis thaliana At2g45010 mRNA for unknown protein, complete cds, clone: RAFL19-63-A04 Length = 1105 Score = 60.0 bits (30), Expect = 2e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 539 ttccgtcaggaactccagaagagatatcatctcaagaactccccgtgcgacccatgcatg 598 ||||| || ||||||||||||| ||||||||||||||| | || || || | |||||| Sbjct: 568 ttccgccaagaactccagaagaaatatcatctcaagaatgcgccttgtgatcattgcatg 627 Query: 599 gctcactgctgcctgcactggtgtgc 624 | |||||| ||| ||||||||||||| Sbjct: 628 gttcactgttgcttgcactggtgtgc 653
>emb|BX822070.1|CNS0A89V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL9ZE10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1009 Score = 60.0 bits (30), Expect = 2e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 539 ttccgtcaggaactccagaagagatatcatctcaagaactccccgtgcgacccatgcatg 598 ||||| || ||||||||||||| ||||||||||||||| | || || || | |||||| Sbjct: 573 ttccgccaagaactccagaagaaatatcatctcaagaatgcgccttgtgatcattgcatg 632 Query: 599 gctcactgctgcctgcactggtgtgc 624 | |||||| ||| ||||||||||||| Sbjct: 633 gttcactgttgcttgcactggtgtgc 658
>emb|BX822069.1|CNS0A89U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL9ZE07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1015 Score = 60.0 bits (30), Expect = 2e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 539 ttccgtcaggaactccagaagagatatcatctcaagaactccccgtgcgacccatgcatg 598 ||||| || ||||||||||||| ||||||||||||||| | || || || | |||||| Sbjct: 578 ttccgccaagaactccagaagaaatatcatctcaagaatgcgccttgtgatcattgcatg 637 Query: 599 gctcactgctgcctgcactggtgtgc 624 | |||||| ||| ||||||||||||| Sbjct: 638 gttcactgttgcttgcactggtgtgc 663
>emb|BX819406.1|CNS0A8TT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB75ZE07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1544 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 539 ttccgtcaggaactccagaagagatatcatctcaagaa 576 ||||| || ||||||||||||| ||||||||||||||| Sbjct: 1155 ttccgccaagaactccagaagaaatatcatctcaagaa 1192
>emb|BX820466.1|CNS0A8O0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH37ZE07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1575 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 539 ttccgtcaggaactccagaagagatatcatctcaagaa 576 ||||| || ||||||||||||| ||||||||||||||| Sbjct: 1181 ttccgccaagaactccagaagaaatatcatctcaagaa 1218
>gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome Length = 3225748 Score = 48.1 bits (24), Expect = 0.071 Identities = 27/28 (96%) Strand = Plus / Plus Query: 136 cgcccccggcgaggacatccgccccggc 163 |||| ||||||||||||||||||||||| Sbjct: 2291843 cgcctccggcgaggacatccgccccggc 2291870
>gb|AC007659.2|AC007659 Arabidopsis thaliana chromosome II section 241 of 255 of the complete sequence. Sequence from clones T13E15, T14P1 Length = 87885 Score = 48.1 bits (24), Expect = 0.071 Identities = 33/36 (91%) Strand = Plus / Plus Query: 539 ttccgtcaggaactccagaagagatatcatctcaag 574 ||||| || ||||||||||||| ||||||||||||| Sbjct: 34890 ttccgccaagaactccagaagaaatatcatctcaag 34925
>ref|XM_803080.1| Trypanosoma cruzi strain CL Brener serine/threonine protein phosphatase (Tc00.1047053509997.86) partial mRNA Length = 1293 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Minus Query: 839 accaaccaaagaaagaaaaataa 861 ||||||||||||||||||||||| Sbjct: 1224 accaaccaaagaaagaaaaataa 1202
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 244 cgagccgcccgccgacgagccg 265 |||||||||||||||||||||| Sbjct: 2995648 cgagccgcccgccgacgagccg 2995627
>gb|CP000481.1| Acidothermus cellulolyticus 11B, complete genome Length = 2443540 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 54 gtccgccgggtcgccgccgccg 75 |||||||||||||||||||||| Sbjct: 623803 gtccgccgggtcgccgccgccg 623782
>gb|AC141899.4| Mus musculus BAC clone RP23-116G15 from chromosome 10, complete sequence Length = 210306 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 842 aaccaaagaaagaaaaataaagccaa 867 ||||||| |||||||||||||||||| Sbjct: 124477 aaccaaacaaagaaaaataaagccaa 124502
>emb|AJ246003.1| Homo sapiens Spast gene for spastin protein Length = 110000 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 595 catggctcactgctgcctgcac 616 |||||||||||||||||||||| Sbjct: 92738 catggctcactgctgcctgcac 92717
>gb|AF265558.1|AF265558 Mycobacterium smegmatis threonyl tRNA synthetase (thrS) gene, partial cds; phosphatidylinositol synthase (pgsA) and putative acyltransferase genes, complete cds; putative alpha-mannosyl transferase gene, partial cds; and unknown gene Length = 2553 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 244 cgagccgcccgccgacgagccg 265 |||||||||||||||||||||| Sbjct: 703 cgagccgcccgccgacgagccg 682
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 240 gctacgagccgcccgccgacga 261 |||||||||||||||||||||| Sbjct: 3681149 gctacgagccgcccgccgacga 3681128
>dbj|AP004960.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19B18, TM0139, complete sequence Length = 106089 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 475 atcgtttcttattggagaaggc 496 |||||||||||||||||||||| Sbjct: 87268 atcgtttcttattggagaaggc 87289
>gb|AF156161.1|AF156161 Streptomyces tendae TarA gene, complete cds Length = 2637 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 ccgccgggtcgccgccgccggc 77 |||||||||||||||||||||| Sbjct: 546 ccgccgggtcgccgccgccggc 567
>emb|AL121658.4|CNS01DS8 BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 563N04 of library RPCI-11 from chromosome 2 of Homo sapiens (Human) Length = 162692 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 595 catggctcactgctgcctgcac 616 |||||||||||||||||||||| Sbjct: 73998 catggctcactgctgcctgcac 73977
>ref|NM_001061769.1| Oryza sativa (japonica cultivar-group) Os05g0335800 (Os05g0335800) mRNA, partial cds Length = 1330 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 53 tgtccgccgggtcgccgccgccggc 77 ||||||||||| ||||||||||||| Sbjct: 36 tgtccgccggggcgccgccgccggc 60
>gb|AC187496.2| Rhesus macaque BAC clone CH250-63H12 from chromosome unknown, complete sequence Length = 173067 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 852 agaaaaataaagccaacggag 872 ||||||||||||||||||||| Sbjct: 1963 agaaaaataaagccaacggag 1983
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1043 tgatgaaggtggtttttatgt 1063 ||||||||||||||||||||| Sbjct: 765164 tgatgaaggtggtttttatgt 765184
>gb|AC124963.32| Medicago truncatula clone mth2-24f5, complete sequence Length = 159515 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 842 aaccaaagaaagaaaaataaa 862 ||||||||||||||||||||| Sbjct: 65093 aaccaaagaaagaaaaataaa 65113
>gb|AC140723.16| Mus musculus chromosome 16, clone RP23-346N4, complete sequence Length = 204252 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 839 accaaccaaagaaagaaaaataaag 863 |||||||||||||| |||||||||| Sbjct: 192642 accaaccaaagaaacaaaaataaag 192666
>ref|XM_756009.1| Ustilago maydis 521 hypothetical protein (UM04955.1) partial mRNA Length = 2553 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 774 ccaacaaggctgagctcgaag 794 ||||||||||||||||||||| Sbjct: 1034 ccaacaaggctgagctcgaag 1054
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 tgtccgccgggtcgccgccgccggc 77 ||||||||||| ||||||||||||| Sbjct: 15569648 tgtccgccggggcgccgccgccggc 15569624
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 ccgccgggtcgccgccgccgg 76 ||||||||||||||||||||| Sbjct: 3351654 ccgccgggtcgccgccgccgg 3351634
>gb|AY899214.1| Streptomyces aizunensis strain NRRL B-11277 glycosyltransferase, polyketide synthase type Is, acyl transferase, membrane protein, ABC transporter, sugar dehydratase/epimerase, sugar epimerase, sugar nucleotidyltransferase, sugar dehydratase/epimerase, thioesterase, acyl CoA ligase, amine oxidase, phosphopantetheinyl transferase, transcriptional regulator, carboxylase/carboxyltransferase, amidinohydrolase, amide synthetase, 5-aminolevulinate synthase, and acyl CoA ligase genes, complete cds; and unknown gene Length = 161719 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 251 cccgccgacgagccgtggacc 271 ||||||||||||||||||||| Sbjct: 112315 cccgccgacgagccgtggacc 112335
>dbj|AK108393.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-F07, full insert sequence Length = 1330 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 53 tgtccgccgggtcgccgccgccggc 77 ||||||||||| ||||||||||||| Sbjct: 36 tgtccgccggggcgccgccgccggc 60
>emb|AL671907.6| Mouse DNA sequence from clone RP23-245F8 on chromosome X, complete sequence Length = 144116 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 835 atagaccaaccaaagaaagaa 855 ||||||||||||||||||||| Sbjct: 91602 atagaccaaccaaagaaagaa 91582
>gb|AC144739.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0049D13, complete sequence Length = 136942 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 tgtccgccgggtcgccgccgccggc 77 ||||||||||| ||||||||||||| Sbjct: 101478 tgtccgccggggcgccgccgccggc 101454
>emb|BX296559.14| Zebrafish DNA sequence from clone CH211-285F17 in linkage group 24, complete sequence Length = 171695 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 877 gatatacagaagaatgttagg 897 ||||||||||||||||||||| Sbjct: 117521 gatatacagaagaatgttagg 117541
>gb|AC154372.1| Mus musculus BAC clone RP23-113F18 from 16, complete sequence Length = 183227 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 839 accaaccaaagaaagaaaaataaag 863 |||||||||||||| |||||||||| Sbjct: 147615 accaaccaaagaaacaaaaataaag 147591
>gb|AC102860.13| Mus musculus chromosome 3, clone RP24-511H12, complete sequence Length = 202315 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 846 aaagaaagaaaaataaagcca 866 ||||||||||||||||||||| Sbjct: 40973 aaagaaagaaaaataaagcca 40953 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 188,332,178 Number of extensions: 12068395 Number of successful extensions: 285034 Number of sequences better than 10.0: 59 Number of HSP's gapped: 285019 Number of HSP's successfully gapped: 92 Length of query: 1154 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1131 Effective length of database: 18,503,978,556 Effective search space: 20927999746836 Effective search space used: 20927999746836 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
