ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf163p23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001051748.1| Oryza sativa (japonica cultivar-group) Os01g0919700 (Os01g0919700) mRNA, complete cds Length = 1598 Score = 815 bits (411), Expect = 0.0 Identities = 770/890 (86%), Gaps = 6/890 (0%) Strand = Plus / Plus Query: 154 catcggagacggcttctcgttcagcggggggaagtatgcggaagcggaaggcccgagcaa 213 |||||| ||||||||||||||||| |||||||||||| |||| | |||||||||| Sbjct: 171 catcggggacggcttctcgttcagtggggggaagtatacggatg------gcccgagcaa 224 Query: 214 ggcggacgagtggttcgctcaggggagaatggtaaaagctcatgcattatatgggaacaa 273 | | || |||||||| ||||| ||||||||||||||||||||| || |||| |||||||| Sbjct: 225 gtccgatgagtggtttgctcaagggagaatggtaaaagctcatccagtatacgggaacaa 284 Query: 274 ggaaaaggcaaaggatcccttttttgggctcaccatgggttcaggatcacaatcttcggg 333 | |||||||| |||||| | ||||||||||| ||||| | | |||||||||||| Sbjct: 285 agggaaggcaaaagatcccatctttgggctcacaatgggagctgaatcacaatcttcaaa 344 Query: 334 tgatgtttttaattggttttgtgtggaagcggggagctcttctaatcctacggtccttct 393 ||||||||| | |||||||||||||| || ||||| ||||| |||||| | || ||| | Sbjct: 345 tgatgttttcaggtggttttgtgtggaggctgggagttcttcgaatcctcctgttctttt 404 Query: 394 aattcatgggtttccttctcaggcatactcttaccgaaatgtgctacctgtactatcaga 453 |||||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||| Sbjct: 405 tattcatggatttccatctcaggcatactcttatcgaaatgtgctacctgtagtatcaga 464 Query: 454 caagtatcgttccattgcttttgactggcttggttttggattctcagacaagcctcaacc 513 ||| |||| | ||||||||||||| ||||| |||||||| |||||||| ||||||||||| Sbjct: 465 caattatcatgccattgcttttgattggctcggttttgggttctcagataagcctcaacc 524 Query: 514 taaatatggttttgactatactctggacgaatatacttcagccctggaatcgttaatcga 573 | |||||||||||||||||||| || |||||||| || || |||| || | ||| | Sbjct: 525 cgattatggttttgactatactcttgatgaatatacatcgtccttggagtctctgatcaa 584 Query: 574 tgctattgctcctgataagctctccattgttgttcaggggtactttgctccaatcgtagt 633 |||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 585 tgctgttgctcctgataagctctccattgttgttcaagggtactttgctccaattgtaat 644 Query: 634 caaatatgctaaagaccatcaggacaagttgaaccaccttatactagttaatccaccgat 693 |||||||||||| || ||||||||||||||||||||||| ||| ||||||| |||||||| Sbjct: 645 caaatatgctaatgaacatcaggacaagttgaaccacctgatattagttaacccaccgat 704 Query: 694 aactgacaaacatgcaaaacttccatccacccttgcatgtttcagcaacttcttgttggg 753 ||| || || ||||| || ||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 705 aacggataagcatgcgaagcttccgtccacccttgcatgtttcagcaatttcttgttggg 764 Query: 754 cgaagtattttctcaggatcctcttagagctagtgataaggccttgactagtagtggccc 813 || ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 765 tgagatattttcccaggatcctctcagagctagtgataaggccttgactagtagtggccc 824 Query: 814 atacatgatgaaggaggaagatgctactgtatatagaaggccataccttgtctcaggtgc 873 |||||||||||| || |||||||| | ||||| |||||||||||||||||||| ||| | Sbjct: 825 atacatgatgaaagaagaagatgcaatggtatacagaaggccataccttgtctctggttc 884 Query: 874 atctggttttgcactgaacgcaataacaagagctatgggaaaggatcttaaggcttacat 933 |||||||||||| |||||||||| | ||||||||| |||||| ||||||| |||||| Sbjct: 885 ttctggttttgcattgaacgcaatcagtagagctatgaaaaaggaccttaaggtttacat 944 Query: 934 tgagtccatgaggagcatattatcgagtgattcatggaatacgaagacaacaatatgttg 993 ||| |||||||||| ||||||||||||||||||||||| || || || ||| ||||||| Sbjct: 945 tgaatccatgaggaatatattatcgagtgattcatggaaaacaaaaacgacagtatgttg 1004 Query: 994 gggcttgagagatcgttggctcacttatgatggggtggaagatttttgtg 1043 ||||||||||||||||||||| | |||||||| || ||||||||||||| Sbjct: 1005 gggcttgagagatcgttggctgaactatgatggagttgaagatttttgtg 1054 Score = 69.9 bits (35), Expect = 3e-08 Identities = 71/83 (85%) Strand = Plus / Plus Query: 1070 ctgccaatggcagggcaccatgctcaggatgatcgtggtgaagagctagggaatataata 1129 |||||||||||||||||||||| ||||| || ||||||||||||||||| || || | Sbjct: 1081 ctgccaatggcagggcaccatgtgcaggaggaccgtggtgaagagctaggcaagctagtc 1140 Query: 1130 aaacgtatactgaggggatgact 1152 |||||||| || || |||||||| Sbjct: 1141 aaacgtattctaagcggatgact 1163
>dbj|AK059028.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B12, full insert sequence Length = 1618 Score = 815 bits (411), Expect = 0.0 Identities = 770/890 (86%), Gaps = 6/890 (0%) Strand = Plus / Plus Query: 154 catcggagacggcttctcgttcagcggggggaagtatgcggaagcggaaggcccgagcaa 213 |||||| ||||||||||||||||| |||||||||||| |||| | |||||||||| Sbjct: 177 catcggggacggcttctcgttcagtggggggaagtatacggatg------gcccgagcaa 230 Query: 214 ggcggacgagtggttcgctcaggggagaatggtaaaagctcatgcattatatgggaacaa 273 | | || |||||||| ||||| ||||||||||||||||||||| || |||| |||||||| Sbjct: 231 gtccgatgagtggtttgctcaagggagaatggtaaaagctcatccagtatacgggaacaa 290 Query: 274 ggaaaaggcaaaggatcccttttttgggctcaccatgggttcaggatcacaatcttcggg 333 | |||||||| |||||| | ||||||||||| ||||| | | |||||||||||| Sbjct: 291 agggaaggcaaaagatcccatctttgggctcacaatgggagctgaatcacaatcttcaaa 350 Query: 334 tgatgtttttaattggttttgtgtggaagcggggagctcttctaatcctacggtccttct 393 ||||||||| | |||||||||||||| || ||||| ||||| |||||| | || ||| | Sbjct: 351 tgatgttttcaggtggttttgtgtggaggctgggagttcttcgaatcctcctgttctttt 410 Query: 394 aattcatgggtttccttctcaggcatactcttaccgaaatgtgctacctgtactatcaga 453 |||||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||| Sbjct: 411 tattcatggatttccatctcaggcatactcttatcgaaatgtgctacctgtagtatcaga 470 Query: 454 caagtatcgttccattgcttttgactggcttggttttggattctcagacaagcctcaacc 513 ||| |||| | ||||||||||||| ||||| |||||||| |||||||| ||||||||||| Sbjct: 471 caattatcatgccattgcttttgattggctcggttttgggttctcagataagcctcaacc 530 Query: 514 taaatatggttttgactatactctggacgaatatacttcagccctggaatcgttaatcga 573 | |||||||||||||||||||| || |||||||| || || |||| || | ||| | Sbjct: 531 cgattatggttttgactatactcttgatgaatatacatcgtccttggagtctctgatcaa 590 Query: 574 tgctattgctcctgataagctctccattgttgttcaggggtactttgctccaatcgtagt 633 |||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 591 tgctgttgctcctgataagctctccattgttgttcaagggtactttgctccaattgtaat 650 Query: 634 caaatatgctaaagaccatcaggacaagttgaaccaccttatactagttaatccaccgat 693 |||||||||||| || ||||||||||||||||||||||| ||| ||||||| |||||||| Sbjct: 651 caaatatgctaatgaacatcaggacaagttgaaccacctgatattagttaacccaccgat 710 Query: 694 aactgacaaacatgcaaaacttccatccacccttgcatgtttcagcaacttcttgttggg 753 ||| || || ||||| || ||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 711 aacggataagcatgcgaagcttccgtccacccttgcatgtttcagcaatttcttgttggg 770 Query: 754 cgaagtattttctcaggatcctcttagagctagtgataaggccttgactagtagtggccc 813 || ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 771 tgagatattttcccaggatcctctcagagctagtgataaggccttgactagtagtggccc 830 Query: 814 atacatgatgaaggaggaagatgctactgtatatagaaggccataccttgtctcaggtgc 873 |||||||||||| || |||||||| | ||||| |||||||||||||||||||| ||| | Sbjct: 831 atacatgatgaaagaagaagatgcaatggtatacagaaggccataccttgtctctggttc 890 Query: 874 atctggttttgcactgaacgcaataacaagagctatgggaaaggatcttaaggcttacat 933 |||||||||||| |||||||||| | ||||||||| |||||| ||||||| |||||| Sbjct: 891 ttctggttttgcattgaacgcaatcagtagagctatgaaaaaggaccttaaggtttacat 950 Query: 934 tgagtccatgaggagcatattatcgagtgattcatggaatacgaagacaacaatatgttg 993 ||| |||||||||| ||||||||||||||||||||||| || || || ||| ||||||| Sbjct: 951 tgaatccatgaggaatatattatcgagtgattcatggaaaacaaaaacgacagtatgttg 1010 Query: 994 gggcttgagagatcgttggctcacttatgatggggtggaagatttttgtg 1043 ||||||||||||||||||||| | |||||||| || ||||||||||||| Sbjct: 1011 gggcttgagagatcgttggctgaactatgatggagttgaagatttttgtg 1060 Score = 69.9 bits (35), Expect = 3e-08 Identities = 71/83 (85%) Strand = Plus / Plus Query: 1070 ctgccaatggcagggcaccatgctcaggatgatcgtggtgaagagctagggaatataata 1129 |||||||||||||||||||||| ||||| || ||||||||||||||||| || || | Sbjct: 1087 ctgccaatggcagggcaccatgtgcaggaggaccgtggtgaagagctaggcaagctagtc 1146 Query: 1130 aaacgtatactgaggggatgact 1152 |||||||| || || |||||||| Sbjct: 1147 aaacgtattctaagcggatgact 1169
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 184 bits (93), Expect = 6e-43 Identities = 144/161 (89%) Strand = Plus / Plus Query: 766 tcaggatcctcttagagctagtgataaggccttgactagtagtggcccatacatgatgaa 825 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40128640 tcaggatcctctcagagctagtgataaggccttgactagtagtggcccatacatgatgaa 40128699 Query: 826 ggaggaagatgctactgtatatagaaggccataccttgtctcaggtgcatctggttttgc 885 || |||||||| | ||||| |||||||||||||||||||| ||| | ||||||||||| Sbjct: 40128700 agaagaagatgcaatggtatacagaaggccataccttgtctctggttcttctggttttgc 40128759 Query: 886 actgaacgcaataacaagagctatgggaaaggatcttaagg 926 | |||||||||| | ||||||||| |||||| ||||||| Sbjct: 40128760 attgaacgcaatcagtagagctatgaaaaaggaccttaagg 40128800 Score = 127 bits (64), Expect = 1e-25 Identities = 103/116 (88%) Strand = Plus / Plus Query: 928 ttacattgagtccatgaggagcatattatcgagtgattcatggaatacgaagacaacaat 987 ||||||||| |||||||||| ||||||||||||||||||||||| || || || ||| | Sbjct: 40128876 ttacattgaatccatgaggaatatattatcgagtgattcatggaaaacaaaaacgacagt 40128935 Query: 988 atgttggggcttgagagatcgttggctcacttatgatggggtggaagatttttgtg 1043 ||||||||||||||||||||||||||| | |||||||| || ||||||||||||| Sbjct: 40128936 atgttggggcttgagagatcgttggctgaactatgatggagttgaagatttttgtg 40128991 Score = 111 bits (56), Expect = 7e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 608 caggggtactttgctccaatcgtagtcaaatatgctaaagaccatcaggacaagttgaac 667 |||||||||||||||||||| ||| ||||||||||||| || |||||||||||||||||| Sbjct: 40128255 caggggtactttgctccaattgtaatcaaatatgctaatgaacatcaggacaagttgaac 40128314 Query: 668 caccttatactagttaatccaccg 691 ||||| ||| ||||||| |||||| Sbjct: 40128315 cacctgatattagttaacccaccg 40128338 Score = 93.7 bits (47), Expect = 2e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 413 caggcatactcttaccgaaatgtgctacctgtactatcagacaagtatcgttccattgct 472 |||||||||||||| |||||||||||||||||| |||||||||| |||| | |||||||| Sbjct: 40127498 caggcatactcttatcgaaatgtgctacctgtagtatcagacaattatcatgccattgct 40127557 Query: 473 tttgactggct 483 ||||| ||||| Sbjct: 40127558 tttgattggct 40127568 Score = 71.9 bits (36), Expect = 6e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 691 gataactgacaaacatgcaaaacttccatccacccttgcatgtttcagcaacttcttgtt 750 |||||| || || ||||| || ||||| ||||||||||||||||||||||| |||||||| Sbjct: 40128473 gataacggataagcatgcgaagcttccgtccacccttgcatgtttcagcaatttcttgtt 40128532 Query: 751 gggcgaagtattttctcagg 770 ||| || ||||||| |||| Sbjct: 40128533 gggtgagatattttcccagg 40128552 Score = 65.9 bits (33), Expect = 4e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 485 ggttttggattctcagacaagcctcaacctaaatatggttttgactatactct 537 |||||||| |||||||| ||||||||||| | |||||||||||||||||||| Sbjct: 40127969 ggttttgggttctcagataagcctcaacccgattatggttttgactatactct 40128021 Score = 65.9 bits (33), Expect = 4e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 573 atgctattgctcctgataagctctccattgttgttca 609 ||||| ||||||||||||||||||||||||||||||| Sbjct: 40128140 atgctgttgctcctgataagctctccattgttgttca 40128176 Score = 61.9 bits (31), Expect = 6e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 244 ggtaaaagctcatgcattatatgggaacaaggaaaaggcaaaggatcccttttttgggct 303 ||||||||||||| || |||| |||||||| | |||||||| |||||| | |||||||| Sbjct: 40127075 ggtaaaagctcatccagtatacgggaacaaagggaaggcaaaagatcccatctttgggct 40127134 Query: 304 caccatgggttcaggatcacaatcttc 330 ||| ||||| | | |||||||||||| Sbjct: 40127135 cacaatgggagctgaatcacaatcttc 40127161 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 198 cggaaggcccgagcaaggcggacgagtggttcgctcaggggagaatggta 247 |||| |||||||||||| | || |||||||| ||||| |||||||||||| Sbjct: 40126791 cggatggcccgagcaagtccgatgagtggtttgctcaagggagaatggta 40126840 Score = 52.0 bits (26), Expect = 0.006 Identities = 59/70 (84%) Strand = Plus / Plus Query: 347 tggttttgtgtggaagcggggagctcttctaatcctacggtccttctaattcatgggttt 406 |||||||||||||| || ||||| ||||| |||||| | || ||| | |||||||| ||| Sbjct: 40127337 tggttttgtgtggaggctgggagttcttcgaatcctcctgttctttttattcatggattt 40127396 Query: 407 ccttctcagg 416 || ||||||| Sbjct: 40127397 ccatctcagg 40127406 Score = 52.0 bits (26), Expect = 0.006 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1078 ggcagggcaccatgctcaggatgatcgtggtgaagagctagg 1119 |||||||||||||| ||||| || ||||||||||||||||| Sbjct: 40129252 ggcagggcaccatgtgcaggaggaccgtggtgaagagctagg 40129293 Score = 44.1 bits (22), Expect = 1.4 Identities = 28/30 (93%) Strand = Plus / Plus Query: 154 catcggagacggcttctcgttcagcggggg 183 |||||| ||||||||||||||||| ||||| Sbjct: 40126618 catcggggacggcttctcgttcagtggggg 40126647
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0678F11 Length = 154292 Score = 184 bits (93), Expect = 6e-43 Identities = 144/161 (89%) Strand = Plus / Plus Query: 766 tcaggatcctcttagagctagtgataaggccttgactagtagtggcccatacatgatgaa 825 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71724 tcaggatcctctcagagctagtgataaggccttgactagtagtggcccatacatgatgaa 71783 Query: 826 ggaggaagatgctactgtatatagaaggccataccttgtctcaggtgcatctggttttgc 885 || |||||||| | ||||| |||||||||||||||||||| ||| | ||||||||||| Sbjct: 71784 agaagaagatgcaatggtatacagaaggccataccttgtctctggttcttctggttttgc 71843 Query: 886 actgaacgcaataacaagagctatgggaaaggatcttaagg 926 | |||||||||| | ||||||||| |||||| ||||||| Sbjct: 71844 attgaacgcaatcagtagagctatgaaaaaggaccttaagg 71884 Score = 127 bits (64), Expect = 1e-25 Identities = 103/116 (88%) Strand = Plus / Plus Query: 928 ttacattgagtccatgaggagcatattatcgagtgattcatggaatacgaagacaacaat 987 ||||||||| |||||||||| ||||||||||||||||||||||| || || || ||| | Sbjct: 71960 ttacattgaatccatgaggaatatattatcgagtgattcatggaaaacaaaaacgacagt 72019 Query: 988 atgttggggcttgagagatcgttggctcacttatgatggggtggaagatttttgtg 1043 ||||||||||||||||||||||||||| | |||||||| || ||||||||||||| Sbjct: 72020 atgttggggcttgagagatcgttggctgaactatgatggagttgaagatttttgtg 72075 Score = 111 bits (56), Expect = 7e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 608 caggggtactttgctccaatcgtagtcaaatatgctaaagaccatcaggacaagttgaac 667 |||||||||||||||||||| ||| ||||||||||||| || |||||||||||||||||| Sbjct: 71339 caggggtactttgctccaattgtaatcaaatatgctaatgaacatcaggacaagttgaac 71398 Query: 668 caccttatactagttaatccaccg 691 ||||| ||| ||||||| |||||| Sbjct: 71399 cacctgatattagttaacccaccg 71422 Score = 93.7 bits (47), Expect = 2e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 413 caggcatactcttaccgaaatgtgctacctgtactatcagacaagtatcgttccattgct 472 |||||||||||||| |||||||||||||||||| |||||||||| |||| | |||||||| Sbjct: 70582 caggcatactcttatcgaaatgtgctacctgtagtatcagacaattatcatgccattgct 70641 Query: 473 tttgactggct 483 ||||| ||||| Sbjct: 70642 tttgattggct 70652 Score = 71.9 bits (36), Expect = 6e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 691 gataactgacaaacatgcaaaacttccatccacccttgcatgtttcagcaacttcttgtt 750 |||||| || || ||||| || ||||| ||||||||||||||||||||||| |||||||| Sbjct: 71557 gataacggataagcatgcgaagcttccgtccacccttgcatgtttcagcaatttcttgtt 71616 Query: 751 gggcgaagtattttctcagg 770 ||| || ||||||| |||| Sbjct: 71617 gggtgagatattttcccagg 71636 Score = 65.9 bits (33), Expect = 4e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 485 ggttttggattctcagacaagcctcaacctaaatatggttttgactatactct 537 |||||||| |||||||| ||||||||||| | |||||||||||||||||||| Sbjct: 71053 ggttttgggttctcagataagcctcaacccgattatggttttgactatactct 71105 Score = 65.9 bits (33), Expect = 4e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 573 atgctattgctcctgataagctctccattgttgttca 609 ||||| ||||||||||||||||||||||||||||||| Sbjct: 71224 atgctgttgctcctgataagctctccattgttgttca 71260 Score = 61.9 bits (31), Expect = 6e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 244 ggtaaaagctcatgcattatatgggaacaaggaaaaggcaaaggatcccttttttgggct 303 ||||||||||||| || |||| |||||||| | |||||||| |||||| | |||||||| Sbjct: 70159 ggtaaaagctcatccagtatacgggaacaaagggaaggcaaaagatcccatctttgggct 70218 Query: 304 caccatgggttcaggatcacaatcttc 330 ||| ||||| | | |||||||||||| Sbjct: 70219 cacaatgggagctgaatcacaatcttc 70245 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 198 cggaaggcccgagcaaggcggacgagtggttcgctcaggggagaatggta 247 |||| |||||||||||| | || |||||||| ||||| |||||||||||| Sbjct: 69875 cggatggcccgagcaagtccgatgagtggtttgctcaagggagaatggta 69924 Score = 52.0 bits (26), Expect = 0.006 Identities = 59/70 (84%) Strand = Plus / Plus Query: 347 tggttttgtgtggaagcggggagctcttctaatcctacggtccttctaattcatgggttt 406 |||||||||||||| || ||||| ||||| |||||| | || ||| | |||||||| ||| Sbjct: 70421 tggttttgtgtggaggctgggagttcttcgaatcctcctgttctttttattcatggattt 70480 Query: 407 ccttctcagg 416 || ||||||| Sbjct: 70481 ccatctcagg 70490 Score = 52.0 bits (26), Expect = 0.006 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1078 ggcagggcaccatgctcaggatgatcgtggtgaagagctagg 1119 |||||||||||||| ||||| || ||||||||||||||||| Sbjct: 72336 ggcagggcaccatgtgcaggaggaccgtggtgaagagctagg 72377 Score = 44.1 bits (22), Expect = 1.4 Identities = 28/30 (93%) Strand = Plus / Plus Query: 154 catcggagacggcttctcgttcagcggggg 183 |||||| ||||||||||||||||| ||||| Sbjct: 69702 catcggggacggcttctcgttcagtggggg 69731
>ref|NM_117352.2| Arabidopsis thaliana catalytic/ hydrolase (AT4G12830) mRNA, complete cds Length = 1490 Score = 44.1 bits (22), Expect = 1.4 Identities = 40/46 (86%) Strand = Plus / Plus Query: 465 ccattgcttttgactggcttggttttggattctcagacaagcctca 510 |||||||||| || ||||| || |||||||| || ||||||||||| Sbjct: 533 ccattgctttcgattggctaggatttggattttctgacaagcctca 578
>gb|AY090325.1| Arabidopsis thaliana AT4g12830/T20K18_180 mRNA, complete cds Length = 1182 Score = 44.1 bits (22), Expect = 1.4 Identities = 40/46 (86%) Strand = Plus / Plus Query: 465 ccattgcttttgactggcttggttttggattctcagacaagcctca 510 |||||||||| || ||||| || |||||||| || ||||||||||| Sbjct: 485 ccattgctttcgattggctaggatttggattttctgacaagcctca 530
>gb|AY056437.1| Arabidopsis thaliana AT4g12830/T20K18_180 mRNA, complete cds Length = 1445 Score = 44.1 bits (22), Expect = 1.4 Identities = 40/46 (86%) Strand = Plus / Plus Query: 465 ccattgcttttgactggcttggttttggattctcagacaagcctca 510 |||||||||| || ||||| || |||||||| || ||||||||||| Sbjct: 532 ccattgctttcgattggctaggatttggattttctgacaagcctca 577
>gb|AY084939.1| Arabidopsis thaliana clone 122353 mRNA, complete sequence Length = 1384 Score = 44.1 bits (22), Expect = 1.4 Identities = 40/46 (86%) Strand = Plus / Plus Query: 465 ccattgcttttgactggcttggttttggattctcagacaagcctca 510 |||||||||| || ||||| || |||||||| || ||||||||||| Sbjct: 527 ccattgctttcgattggctaggatttggattttctgacaagcctca 572
>emb|BX826821.1|CNS0A3BF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB65ZH11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1433 Score = 44.1 bits (22), Expect = 1.4 Identities = 40/46 (86%) Strand = Plus / Plus Query: 465 ccattgcttttgactggcttggttttggattctcagacaagcctca 510 |||||||||| || ||||| || |||||||| || ||||||||||| Sbjct: 505 ccattgctttcgattggctaggatttggattttctgacaagcctca 550
>emb|BX827518.1|CNS0A2T1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS69ZB10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1336 Score = 44.1 bits (22), Expect = 1.4 Identities = 40/46 (86%) Strand = Plus / Plus Query: 465 ccattgcttttgactggcttggttttggattctcagacaagcctca 510 |||||||||| || ||||| || |||||||| || ||||||||||| Sbjct: 514 ccattgctttcgattggctaggatttggattttctgacaagcctca 559
>gb|AC189021.1| Macaca mulatta chromosome UNK clone CH250-11H12, complete sequence Length = 143235 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 897 taacaagagctatgggaaagg 917 ||||||||||||||||||||| Sbjct: 42012 taacaagagctatgggaaagg 42032
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 gacgacgacatcggagacggc 166 ||||||||||||||||||||| Sbjct: 891604 gacgacgacatcggagacggc 891624
>gb|AY433095.1| Aedes aegypti ASAP ID: 37505 conserved unknown mRNA sequence Length = 478 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 551 tcagccctggaatcgttaatc 571 ||||||||||||||||||||| Sbjct: 156 tcagccctggaatcgttaatc 176
>gb|AC116394.22| Mus musculus chromosome 8, clone RP23-100C12, complete sequence Length = 186505 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 765 ctcaggatcctcttagagcta 785 ||||||||||||||||||||| Sbjct: 50421 ctcaggatcctcttagagcta 50401
>gb|AY495597.1| Gibberella moniliformis polyketide synthase (PKS7) gene, complete cds Length = 11078 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 aaggatcccttttttgggctc 304 ||||||||||||||||||||| Sbjct: 7236 aaggatcccttttttgggctc 7256
>gb|AC154183.2| Mus musculus BAC clone RP23-474E16 from chromosome 17, complete sequence Length = 181773 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 gcttttgactggcttggtttt 490 ||||||||||||||||||||| Sbjct: 2660 gcttttgactggcttggtttt 2640
>emb|BX510300.12| Mouse DNA sequence from clone RP23-221A16 on chromosome 4, complete sequence Length = 128614 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 824 aaggaggaagatgctactgta 844 ||||||||||||||||||||| Sbjct: 60603 aaggaggaagatgctactgta 60623
>dbj|AP000445.5| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-78H16, complete sequences Length = 125356 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 gggaacaaggaaaaggcaaag 286 ||||||||||||||||||||| Sbjct: 46706 gggaacaaggaaaaggcaaag 46686
>dbj|AP001350.4| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-55A18, complete sequences Length = 142604 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 gggaacaaggaaaaggcaaag 286 ||||||||||||||||||||| Sbjct: 127132 gggaacaaggaaaaggcaaag 127112
>gb|AC153637.11| Mus musculus 6 BAC RP23-313A2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226751 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 263 tatgggaacaaggaaaaggcaaagg 287 |||| |||||||||||||||||||| Sbjct: 200610 tatgtgaacaaggaaaaggcaaagg 200586 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 243,674,166 Number of extensions: 12341741 Number of successful extensions: 259589 Number of sequences better than 10.0: 20 Number of HSP's gapped: 259587 Number of HSP's successfully gapped: 46 Length of query: 1499 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1476 Effective length of database: 18,503,978,556 Effective search space: 27311872348656 Effective search space used: 27311872348656 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
