| Clone Name | FLbaf169c16 |
|---|---|
| Clone Library Name | barley_pub |
>Q7S6J4:HSE1_NEUCR Class E vacuolar protein-sorting machinery protein hse-1 -| Neurospora crassa Length = 745 Score = 33.9 bits (76), Expect = 0.48 Identities = 21/46 (45%), Positives = 24/46 (52%) Frame = -2 Query: 184 SPGAPSSRRPGLAPRPPSGTLVAVEEPAGCSCCSPSGYVRPLASGA 47 SPGA SS G AP PPSG P+G + +PS P A GA Sbjct: 606 SPGAGSSNNVGSAPPPPSG-----PAPSGPAPSAPSAPSAPSAPGA 646
>Q98EC1:OMP19_RHILO Outer membrane lipoprotein omp19 homolog precursor - Rhizobium loti| (Mesorhizobium loti) Length = 179 Score = 32.0 bits (71), Expect = 1.8 Identities = 18/53 (33%), Positives = 23/53 (43%) Frame = -2 Query: 181 PGAPSSRRPGLAPRPPSGTLVAVEEPAGCSCCSPSGYVRPLASGAWCAVVSGR 23 P +P S P P P+ T VA P G + S +G W A VSG+ Sbjct: 53 PASPGSTDPSKFPTAPANTQVASLPPDGQAPAGASDLSAAAVAGVWNASVSGQ 105
>Q566M8:RN150_DANRE RING finger protein 150 precursor - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 419 Score = 31.2 bits (69), Expect = 3.1 Identities = 15/38 (39%), Positives = 17/38 (44%) Frame = -2 Query: 142 RPPSGTLVAVEEPAGCSCCSPSGYVRPLASGAWCAVVS 29 R G L P C PSG P A GAW A++S Sbjct: 73 REARGVLAMPAAPHDRHACDPSGRFTPRAHGAWIALIS 110
>P47876:IBP1_MOUSE Insulin-like growth factor-binding protein 1 precursor - Mus| musculus (Mouse) Length = 272 Score = 30.8 bits (68), Expect = 4.1 Identities = 19/55 (34%), Positives = 26/55 (47%) Frame = -2 Query: 187 CSPGAPSSRRPGLAPRPPSGTLVAVEEPAGCSCCSPSGYVRPLASGAWCAVVSGR 23 C+P ++ R GL P P+ + + PAGC CC L GA C V + R Sbjct: 32 CAPC--TAERLGLCPPVPA-SCPEISRPAGCGCCPTCA----LPMGAACGVATAR 79
>O35923:BRCA2_RAT Breast cancer type 2 susceptibility protein homolog - Rattus| norvegicus (Rat) Length = 3343 Score = 30.4 bits (67), Expect = 5.3 Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 14/68 (20%) Frame = -2 Query: 190 WCSPGAPSSRRP--------------GLAPRPPSGTLVAVEEPAGCSCCSPSGYVRPLAS 53 W +P +R P G PR + P SCC+P+G PLA Sbjct: 3118 WSTPNKDPTREPYPASTCSASDLASGGQLPRSSPTDQQSYRSPL--SCCTPTGKSTPLAH 3175 Query: 52 GAWCAVVS 29 AW A S Sbjct: 3176 SAWMAAKS 3183
>O35468:WNT9B_MOUSE Protein Wnt-9b precursor - Mus musculus (Mouse)| Length = 359 Score = 30.0 bits (66), Expect = 7.0 Identities = 22/53 (41%), Positives = 27/53 (50%) Frame = -2 Query: 196 WIWCSPGAPSSRRPGLAPRPPSGTLVAVEEPAGCSCCSPSGYVRPLASGAWCA 38 W PG P+ GLAPRP G LV +E+ S C PS Y P +G C+ Sbjct: 264 WAPAKPGGPAK---GLAPRP--GDLVYMEDSP--SFCRPSKY-SPGTAGRVCS 308
>Q49LS4:XKR4_PANTR XK-related protein 4 - Pan troglodytes (Chimpanzee)| Length = 650 Score = 29.6 bits (65), Expect = 9.1 Identities = 19/51 (37%), Positives = 21/51 (41%) Frame = -2 Query: 154 GLAPRPPSGTLVAVEEPAGCSCCSPSGYVRPLASGAWCAVVSGRRDSAVMG 2 GLAP PSG+ EE AG CC G C +G SA G Sbjct: 33 GLAPGLPSGSGAEDEEAAGGGCCPDGG-----GCSRCCCCCAGSGSSAGSG 78
>Q27974:AUXI_BOVIN Putative tyrosine-protein phosphatase auxilin - Bos taurus (Bovine)| Length = 910 Score = 29.6 bits (65), Expect = 9.1 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%) Frame = -2 Query: 508 YTPIITHDEVHEYRTGHG--YMNISHTHTGRQVLIMYHLRST 389 YT + + EYR G ++ +S T G V+ MYHLRST Sbjct: 262 YTTCADFERMKEYRVQDGKIFIPLSITVQGDVVVSMYHLRST 303 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 98,742,420 Number of extensions: 2058165 Number of successful extensions: 5822 Number of sequences better than 10.0: 8 Number of HSP's gapped: 5817 Number of HSP's successfully gapped: 8 Length of query: 205 Length of database: 100,686,439 Length adjustment: 108 Effective length of query: 97 Effective length of database: 71,062,579 Effective search space: 6893070163 Effective search space used: 6893070163 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)