ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf169b22 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | D85317:Os01g0703400 | 77 | 2e-14 | 2 | AK061657:Os01g0703400 | 77 | 2e-14 | 3 | AK100273:Os05g0543400 | 56 | 3e-08 | 4 | AK073822:Os05g0543400 | 56 | 3e-08 | 5 | Os04g0657300:Os04g0657300 | 40 | 0.002 | 6 | AK072747:Os04g0657100 | 34 | 0.12 | 7 | AK063730:Os01g0754000 | 34 | 0.12 | 8 | AK063702: | 30 | 2.2 | 9 | AK063465:Os09g0300800 | 29 | 4.9 | 10 | Os02g0599800:Os02g0599800 | 29 | 4.9 | 11 | Os09g0287100:Os09g0287100 | 28 | 6.4 | 12 | AK072107:Os01g0163000 | 28 | 6.4 | 13 | AK110227: | 28 | 8.3 | 14 | Os09g0443000:Os09g0443000 | 28 | 8.3 | 15 | Os05g0220500:Os05g0220500 | 28 | 8.3 | 16 | Os02g0564400:Os02g0564400 | 28 | 8.3 | 17 | AK110028: | 28 | 8.3 | 18 | AK059010:Os02g0569000 | 28 | 8.3 |
|---|
>D85317:Os01g0703400 | Length = 353 Score = 76.6 bits (187), Expect = 2e-14 Identities = 37/45 (82%), Positives = 42/45 (93%), Gaps = 1/45 (2%) Frame = +2 Query: 467 LSNGSGGDS-KAEFAEIYSRLKEEMLEDPAFEFTDESLQWIDRVM 598 ++NG+ GDS KA FAEIYSRLKEEMLEDPAFEFTDESLQWIDR++ Sbjct: 6 VANGASGDSSKAAFAEIYSRLKEEMLEDPAFEFTDESLQWIDRML 50
>AK061657:Os01g0703400 | Length = 353 Score = 76.6 bits (187), Expect = 2e-14 Identities = 37/45 (82%), Positives = 42/45 (93%), Gaps = 1/45 (2%) Frame = +2 Query: 467 LSNGSGGDS-KAEFAEIYSRLKEEMLEDPAFEFTDESLQWIDRVM 598 ++NG+ GDS KA FAEIYSRLKEEMLEDPAFEFTDESLQWIDR++ Sbjct: 6 VANGASGDSSKAAFAEIYSRLKEEMLEDPAFEFTDESLQWIDRML 50
>AK100273:Os05g0543400 | Length = 422 Score = 56.2 bits (134), Expect = 3e-08 Identities = 27/43 (62%), Positives = 31/43 (72%), Gaps = 2/43 (4%) Frame = +2 Query: 476 GSGG--DSKAEFAEIYSRLKEEMLEDPAFEFTDESLQWIDRVM 598 G GG K EF +IY LKEE+L DPAFEFTD S QWIDR++ Sbjct: 77 GGGGVDKEKEEFKQIYGVLKEELLRDPAFEFTDSSRQWIDRML 119
>AK073822:Os05g0543400 | Length = 355 Score = 56.2 bits (134), Expect = 3e-08 Identities = 27/43 (62%), Positives = 31/43 (72%), Gaps = 2/43 (4%) Frame = +2 Query: 476 GSGG--DSKAEFAEIYSRLKEEMLEDPAFEFTDESLQWIDRVM 598 G GG K EF +IY LKEE+L DPAFEFTD S QWIDR++ Sbjct: 10 GGGGVDKEKEEFKQIYGVLKEELLRDPAFEFTDSSRQWIDRML 52
>Os04g0657300:Os04g0657300 | Length = 407 Score = 40.4 bits (93), Expect = 0.002 Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 2/43 (4%) Frame = +2 Query: 476 GSGGDSKAEFAEIYSRLKEEMLEDPA--FEFTDESLQWIDRVM 598 G G ++ F Y RLK E+L D A F+FT+E+ QW+ ++M Sbjct: 62 GQGEQTRDRFVRAYERLKSELLNDRAFNFDFTEETRQWVAKMM 104
>AK072747:Os04g0657100 | Length = 392 Score = 34.3 bits (77), Expect = 0.12 Identities = 11/37 (29%), Positives = 26/37 (70%) Frame = +2 Query: 488 DSKAEFAEIYSRLKEEMLEDPAFEFTDESLQWIDRVM 598 D++ F + Y RL+++++ D + E TDE+ +W+ +++ Sbjct: 53 DARERFVQAYGRLRDDLVGDDSCELTDEARRWLAQMI 89
>AK063730:Os01g0754000 | Length = 99 Score = 34.3 bits (77), Expect = 0.12 Identities = 21/47 (44%), Positives = 27/47 (57%) Frame = +2 Query: 185 RGDPSRACASRGRPAPFPASLPRVSPSRISVASPVLK*NACPEICLP 325 RG +RA ASR PAP P LP +P R+ + SPV + C E +P Sbjct: 22 RGAAARA-ASRAGPAPLPRRLPAAAP-RLILRSPVEMSSVCLETLMP 66
>AK063702: | Length = 374 Score = 30.0 bits (66), Expect = 2.2 Identities = 17/76 (22%), Positives = 32/76 (42%) Frame = +2 Query: 194 PSRACASRGRPAPFPASLPRVSPSRISVASPVLK*NACPEICLPHKNSVQGVQ*RAPCFS 373 P+R R +P P+P +P P + PV C P +V AP F+ Sbjct: 234 PTRVPVPREQPVPYPFQVPVPVPQPVPRPRPVPVPTPCAVAAAPAVAAVAAAP--APAFA 291 Query: 374 SSSPTILSTEISAPSR 421 +++P + + + ++ Sbjct: 292 AAAPALSAAQFGGAAQ 307
>AK063465:Os09g0300800 | Length = 456 Score = 28.9 bits (63), Expect = 4.9 Identities = 14/26 (53%), Positives = 14/26 (53%) Frame = +3 Query: 234 SQRRSHACRRHGSPWHLPSLNKTRAQ 311 S R HA H SPWHL L TR Q Sbjct: 211 SYSRVHALDVHASPWHLLHLLHTRLQ 236
>Os02g0599800:Os02g0599800 | Length = 654 Score = 28.9 bits (63), Expect = 4.9 Identities = 13/45 (28%), Positives = 22/45 (48%) Frame = -2 Query: 783 SATPNPYSHRNTKLHRPGEFYRPVTKSMTITQRPVCAVYSETRSN 649 +A P P + ++ GE RP T + +T R C+ S R++ Sbjct: 458 AAPPPPLTQMQAGVNTSGEDLRPTTSASALTARSSCSTSSRRRAS 502
>Os09g0287100:Os09g0287100 | Length = 306 Score = 28.5 bits (62), Expect = 6.4 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = -2 Query: 786 PSATPNPYSHRNTKLHRPGEFYRPVTK 706 PS P P HR + H G +RP T+ Sbjct: 170 PSPPPRPLHHRRRRRHLCGRLHRPCTR 196
>AK072107:Os01g0163000 | Length = 972 Score = 28.5 bits (62), Expect = 6.4 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = +2 Query: 509 EIYSRLKEEMLEDPAFEFTDESLQWIDRVMP 601 E+ L M ED AFE D S WI+ +P Sbjct: 646 ELRGELPHNMKEDCAFEALDVSYNWIEGTLP 676
>AK110227: | Length = 884 Score = 28.1 bits (61), Expect = 8.3 Identities = 20/75 (26%), Positives = 30/75 (40%) Frame = -3 Query: 818 FAAKFYSAFTSPLQLPTLTPIGTQNCTDRENFTGQSPNP*QSPKDPCAPSTLKPDQTNSR 639 FA + Y T+ L +PTL PI + R+N + P PD + Sbjct: 364 FAVEPYPPRTAGLAVPTLEPIRARRVASRDN------------RSPSTERVAAPDAASVH 411 Query: 638 TPRNI*RDGRGEEAL 594 + DG GE+A+ Sbjct: 412 S-----ADGEGEDAI 421
>Os09g0443000:Os09g0443000 | Length = 439 Score = 28.1 bits (61), Expect = 8.3 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -1 Query: 253 AWERRWEGRWPPATGASA 200 AW RR RWPP+T +S+ Sbjct: 62 AWRRRRARRWPPSTASSS 79
>Os05g0220500:Os05g0220500 | Length = 410 Score = 28.1 bits (61), Expect = 8.3 Identities = 37/141 (26%), Positives = 52/141 (36%), Gaps = 11/141 (7%) Frame = -2 Query: 411 AEISVESMVGEEDEKQGALYCTPWTEFLWGKQISGHAFYLRT-----------GDATEIR 265 A ++VE+ EE G CTP T+ H LR G A E Sbjct: 94 AAVAVET---EEPSGAGGDLCTPGTK----ASSPSHNLLLRWLLGVAACACAGGGAEEAV 146 Query: 264 DGDTRGSDAGKGAGLPRLAQAREGSPRRVRSTCSEPLDQ*TFTVFPLLKGKILVASLVPA 85 D D + AG+ G +R+ + +E + T + G + A Sbjct: 147 IADDCRRDEARAAGVA------VGGEKRISTEAAEAVAT-TRVSRGMCDGDVFDAG---- 195 Query: 84 FVGSPPPLVQLEAPRRLAAAD 22 +PPPL QL PRR+ AD Sbjct: 196 -TATPPPLPQLAEPRRIRTAD 215
>Os02g0564400:Os02g0564400 | Length = 631 Score = 28.1 bits (61), Expect = 8.3 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Frame = -2 Query: 252 RGSDAGKGAGLPRLAQAREG--SPRRVRSTCSEPLDQ*TFTVFPLLKGKILVASLVPAFV 79 R D+ G G P A R G S +V S+ E ++ G ++ L+P F+ Sbjct: 429 RRQDSSIGFGAPVRANMRAGGISSAQVTSSLLESVES----------GDLIAYGLIPEFI 478 Query: 78 GSPPPLVQLEA 46 G P LV L A Sbjct: 479 GRFPILVSLAA 489
>AK110028: | Length = 1028 Score = 28.1 bits (61), Expect = 8.3 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%) Frame = -2 Query: 291 RTGDATEIRDGDTRGSDAGKGAGLPRLAQ----AREGSPRRVRS 172 R G+A++ RDGD S + +G ++Q AR+G+P S Sbjct: 782 RDGEASDSRDGDDESSSGEESSGNEGVSQVVEGARDGTPSPTNS 825
>AK059010:Os02g0569000 | Length = 501 Score = 28.1 bits (61), Expect = 8.3 Identities = 17/56 (30%), Positives = 24/56 (42%) Frame = -1 Query: 307 ARVLFKDGRCHGDP*RRHAWERRWEGRWPPATGASARGIAAPR*IYVLRTVGSMNV 140 ARV+ R HG R W + RW G A + +PR + +R+V V Sbjct: 106 ARVVPDSNRAHGFSDRSIIWLPSSDPRWKALRGIQATHLFSPRGLAAVRSVRESKV 161 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 24,591,963 Number of extensions: 583670 Number of successful extensions: 2454 Number of sequences better than 10.0: 18 Number of HSP's gapped: 2448 Number of HSP's successfully gapped: 18 Length of query: 290 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 190 Effective length of database: 11,395,755 Effective search space: 2165193450 Effective search space used: 2165193450 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
