ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf166c08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK105399:Os12g0120000 29 2.2
2AK101734:Os11g0120200 29 2.2
3AK069019:Os05g0199100 29 2.2
4Os04g0388600:Os04g0388600 29 2.9
5Os07g0141700:Os07g0141700 28 6.4 
>AK105399:Os12g0120000 |
          Length = 708
 Score = 29.3 bits (64), Expect = 2.2
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -2

Query: 570 SEVTNPLKEKKKVKLQIQGAGRIETHTPTRDKHRRMRC 457
           S +T  L + KK+   + G G+I     T+DK  +++C
Sbjct: 647 SHITMVLSQFKKISDWLDGVGKIAEEATTKDKVEQLKC 684
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>AK101734:Os11g0120200 |
          Length = 708

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -2

Query: 570 SEVTNPLKEKKKVKLQIQGAGRIETHTPTRDKHRRMRC 457
           S +T  L + KK+   + G G+I     T+DK  +++C
Sbjct: 647 SHITMVLSQFKKISDWLDGVGKIAEEATTKDKVEQLKC 684
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>AK069019:Os05g0199100 |
          Length = 329

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -1

Query: 451 PLHEQ-QPRLFSTRKIARRENHAQASTRPGPRPSLSRLWNTR 329
           P H + +PRL + R   RR     ASTRP   P+  R W TR
Sbjct: 16  PFHRRHKPRLAAPRSRPRRRQWPTASTRP-RSPTHRRQWRTR 56
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>Os04g0388600:Os04g0388600 |
          Length = 148

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -1

Query: 163 SAPPSAAGWKSSPSFLWWNRWWW 95
           SA  S  G    P + WW  WWW
Sbjct: 40  SAECSGGGGGGRPPWWWWCWWWW 62
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>Os07g0141700:Os07g0141700 |
          Length = 1125

 Score = 27.7 bits (60), Expect = 6.4
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 382 ASTRPGPRPSLSRLWNTRKH 323
           A  +  PRPS S  WN RKH
Sbjct: 684 AELQASPRPSSSSCWNMRKH 703


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 12,851,419
Number of extensions: 233426
Number of successful extensions: 713
Number of sequences better than 10.0: 5
Number of HSP's gapped: 712
Number of HSP's successfully gapped: 5
Length of query: 207
Length of database: 15,399,855
Length adjustment: 96
Effective length of query: 111
Effective length of database: 11,555,919
Effective search space: 1282707009
Effective search space used: 1282707009
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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