ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf163o15 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os11g0264600:Os11g0264600 | 361 | e-100 | 2 | Os11g0572700:Os11g0572700 | 32 | 1.5 | 3 | AK104250:Os11g0127800 | 31 | 2.5 | 4 | AK104179:Os11g0127800 | 31 | 2.5 | 5 | AK104015:Os11g0127800 | 31 | 2.5 | 6 | AK059969:Os11g0127800 | 31 | 2.5 | 7 | AK119993:Os01g0283400 | 30 | 3.3 | 8 | AK070600:Os02g0143200 | 30 | 4.3 | 9 | AK101914:Os06g0222800 | 29 | 7.3 |
|---|
>Os11g0264600:Os11g0264600 | Length = 298 Score = 361 bits (926), Expect = e-100 Identities = 176/209 (84%), Positives = 194/209 (92%) Frame = +3 Query: 300 AAGASESNTVQFTLEHDLGAGLGFAPAGSFSARLKSSAHGSQTLTKLRFTRNELSEDEKD 479 +A A+ES+ VQF+LEHDLGAG F PAGSFSARLKSSAHGSQTLTKLRFTRNEL+ DEKD Sbjct: 71 SAAAAESSAVQFSLEHDLGAG--FVPAGSFSARLKSSAHGSQTLTKLRFTRNELTGDEKD 128 Query: 480 AFKKLLEEDSFYTIRLPSNVLDPTRHDYIYSSIKARCIPRDSLDEHIVIHMDGVNILAVN 659 AFKKLL+ED FY+IRL SNVLDP R DY+ SSIKARCIPR+SLDEHIVIHMDGVNILAVN Sbjct: 129 AFKKLLDEDGFYSIRLLSNVLDPARKDYVVSSIKARCIPRESLDEHIVIHMDGVNILAVN 188 Query: 660 YGSVGGCQYPRPMKVPSKWTFNSYTILKTADQAPRTPSFVEQLIETESGLGEVMKPPEKS 839 YGSVGGC YPRP+K+PSKW FNSYT+LKT++QAPRTPSFV+QLIE E+GLGEV+K PEKS Sbjct: 189 YGSVGGCTYPRPVKMPSKWVFNSYTVLKTSEQAPRTPSFVDQLIEAENGLGEVVKSPEKS 248 Query: 840 FWAKYWMYIIPLGLIVMNAVTAAANIPEE 926 FWAKYWMYIIPLGLIVMNAVTAAAN+PEE Sbjct: 249 FWAKYWMYIIPLGLIVMNAVTAAANMPEE 277
>Os11g0572700:Os11g0572700 | Length = 602 Score = 31.6 bits (70), Expect = 1.5 Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 1/120 (0%) Frame = +3 Query: 315 ESNTVQFTLEHDLGAGLGFAPAGSFSAR-LKSSAHGSQTLTKLRFTRNELSEDEKDAFKK 491 ++N LE+ G+ + F A+ + S+A T KL EL E+EK+ K Sbjct: 333 KANVTNVILENGKAVGVRLSNGKEFFAKTVISNATRWDTFGKL-LKVEELPEEEKNFQKN 391 Query: 492 LLEEDSFYTIRLPSNVLDPTRHDYIYSSIKARCIPRDSLDEHIVIHMDGVNILAVNYGSV 671 ++ SF +I + +KA +P D+ H V+ D N L YGS+ Sbjct: 392 YVKAPSFLSIHM---------------GVKASVLPADTDCHHFVLEDDWAN-LEKPYGSI 435
>AK104250:Os11g0127800 | Length = 230 Score = 30.8 bits (68), Expect = 2.5 Identities = 26/87 (29%), Positives = 43/87 (49%) Frame = -2 Query: 943 PCPPACSSGMLAAAVTAFMTMRPRGMMYIQYLAQKDFSGGFITSPSPLSVSINCSTNDGV 764 P PP CSS + A F ++P+ +++I L ++ +G S S L S+ CS++ G Sbjct: 25 PPPPPCSSSSSSYASHGFKLLQPQ-LLFINRLTSRNSNGSSRRSISIL--SLRCSSS-GT 80 Query: 763 LGAWSAVFRIVYELNVHFDGTFIGLGY 683 A S+ + L DG + +GY Sbjct: 81 DSASSSATSERWVLEPAGDGDWRHIGY 107
>AK104179:Os11g0127800 | Length = 230 Score = 30.8 bits (68), Expect = 2.5 Identities = 26/87 (29%), Positives = 43/87 (49%) Frame = -2 Query: 943 PCPPACSSGMLAAAVTAFMTMRPRGMMYIQYLAQKDFSGGFITSPSPLSVSINCSTNDGV 764 P PP CSS + A F ++P+ +++I L ++ +G S S L S+ CS++ G Sbjct: 25 PPPPPCSSSSSSYASHGFKLLQPQ-LLFINRLTSRNSNGSSRRSISIL--SLRCSSS-GT 80 Query: 763 LGAWSAVFRIVYELNVHFDGTFIGLGY 683 A S+ + L DG + +GY Sbjct: 81 DSASSSATSERWVLEPAGDGDWRHIGY 107
>AK104015:Os11g0127800 | Length = 230 Score = 30.8 bits (68), Expect = 2.5 Identities = 26/87 (29%), Positives = 43/87 (49%) Frame = -2 Query: 943 PCPPACSSGMLAAAVTAFMTMRPRGMMYIQYLAQKDFSGGFITSPSPLSVSINCSTNDGV 764 P PP CSS + A F ++P+ +++I L ++ +G S S L S+ CS++ G Sbjct: 25 PPPPPCSSSSSSYASHGFKLLQPQ-LLFINRLTSRNSNGSSRRSISIL--SLRCSSS-GT 80 Query: 763 LGAWSAVFRIVYELNVHFDGTFIGLGY 683 A S+ + L DG + +GY Sbjct: 81 DSASSSATSERWVLEPAGDGDWRHIGY 107
>AK059969:Os11g0127800 | Length = 230 Score = 30.8 bits (68), Expect = 2.5 Identities = 26/87 (29%), Positives = 43/87 (49%) Frame = -2 Query: 943 PCPPACSSGMLAAAVTAFMTMRPRGMMYIQYLAQKDFSGGFITSPSPLSVSINCSTNDGV 764 P PP CSS + A F ++P+ +++I L ++ +G S S L S+ CS++ G Sbjct: 25 PPPPPCSSSSSSYASHGFKLLQPQ-LLFINRLTSRNSNGSSRRSISIL--SLRCSSS-GT 80 Query: 763 LGAWSAVFRIVYELNVHFDGTFIGLGY 683 A S+ + L DG + +GY Sbjct: 81 DSASSSATSERWVLEPAGDGDWRHIGY 107
>AK119993:Os01g0283400 | Length = 110 Score = 30.4 bits (67), Expect = 3.3 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = -1 Query: 992 SSSAWSSNWRPLCWSSTLPSSLLLRYVGCCRDGVHDNETKRNDVH 858 SSS+ S+ RP CW S + ++ R CC HD + + +H Sbjct: 29 SSSSSSAGTRPSCWRSVVTTATARR--RCCGGDEHDTAARASVLH 71
>AK070600:Os02g0143200 | Length = 1035 Score = 30.0 bits (66), Expect = 4.3 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Frame = -1 Query: 1109 SSRSIRCPFFV-NLKLKRCWA*ITSAELPFPMACKECKKPSSSAWSSNWRPLCWSSTLPS 933 SSRS R F V N +KR + S L PM+ KEC+ S+ + S L S+ + Sbjct: 599 SSRSRRHSFKVPNFSMKR----VASLSLKSPMSPKECQNTSAESCSETESTLLRLSSRQA 654 Query: 932 SLLL 921 +LLL Sbjct: 655 TLLL 658
>AK101914:Os06g0222800 | Length = 406 Score = 29.3 bits (64), Expect = 7.3 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = -1 Query: 1046 ITSAELPFPMACKECKKPSSSAWSSNWRPL 957 +TSA LP P A C +AW S W PL Sbjct: 15 LTSAPLP-PFAAARCSPAVMAAWPSPWLPL 43 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 36,426,776 Number of extensions: 807423 Number of successful extensions: 2225 Number of sequences better than 10.0: 9 Number of HSP's gapped: 2224 Number of HSP's successfully gapped: 9 Length of query: 480 Length of database: 15,399,855 Length adjustment: 104 Effective length of query: 376 Effective length of database: 11,235,591 Effective search space: 4224582216 Effective search space used: 4224582216 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
