| Clone Name | FLbaf163n03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4) Length = 637 Score = 1223 bits (617), Expect = 0.0 Identities = 632/637 (99%) Strand = Plus / Plus Query: 43 aaagccaagaagccaaccatggcacccagcaagagtattaagagtgtggtcatttgtgtt 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aaagccaagaagccaaccatggcacccagcaagagtattaagagtgtggtcatttgtgtt 60 Query: 103 ctcatactgggtttagttctggagcaggtccaggtggagggaaaaagttgctgcaaggac 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ctcatactgggtttagttctggagcaggtccaggtggagggaaaaagttgctgcaaggac 120 Query: 163 acgttagctagaaactgctacaacacttgccgtttcgcgggtggttcccgtccagtctgc 222 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 121 acgttagctagaaactgctacaacacttgccatttcgcgggtggttcccgtccagtctgc 180 Query: 223 gcaggtgcttgtcgttgtaaaatcataagtggtccaaaatgccctagtgactatcctaaa 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcaggtgcttgtcgttgtaaaatcataagtggtccaaaatgccctagtgactatcctaaa 240 Query: 283 ctgaatcttatccctgaatccggtgaaccagatgtcactcagtactgcaccattggatgc 342 ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 241 ctgaatcttctccctgaatccggtgaaccagatgtcacgcagtactgcaccattggatgc 300 Query: 343 aggaattctgtctgtgacaacatggacaatgttttccgtggccaagagatgaaattcgac 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 aggaattctgtctgtgacaacatggacaatgttttccgtggccaagagatgaaattcgac 360 Query: 403 atgggactctgcagcaacgcatgtgcccgtttctgtaatgatggtgcagtcattcagtct 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atgggactctgcagcaacgcatgtgcccgtttctgtaatgatggtgcagtcattcagtct 420 Query: 463 gttgaagcctaatcatgccttcttgtgcatgatttctatggccaaggtcgtatagtcatt 522 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 421 gttgaagcctaatcatgccttcttgtgcatgatttctatggccatggtcgtattgtcatt 480 Query: 523 ttgtcttgaataatcttgataccatcagctgtatggaagccaatgtatcatcttacttat 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ttgtcttgaataatcttgataccatcagctgtatggaagccaatgtatcatcttacttat 540 Query: 583 gtatttgtctttttcccttgttccaataagagtcgccacgatgaatctatttgtaccctt 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 gtatttgtctttttcccttgttccaataagagtcgccacgatgaatctatttgtaccctt 600 Query: 643 ggcttaatataaaagttccatggatatattatgtgat 679 ||||||||||||||||||||||||||||||||||||| Sbjct: 601 ggcttaatataaaagttccatggatatattatgtgat 637
>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4) Length = 658 Score = 1189 bits (600), Expect = 0.0 Identities = 633/644 (98%) Strand = Plus / Plus Query: 38 aaattaaagccaagaagccaaccatggcacccagcaagagtattaagagtgtggtcattt 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3 aaattaaagccaagaagccaaccatggcacccagcaagagtattaagagtgtggtcattt 62 Query: 98 gtgttctcatactgggtttagttctggagcaggtccaggtggagggaaaaagttgctgca 157 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 gtgttctcatactgggtttagttctggagcaggtccaggtggagggaaaaagttgctgca 122 Query: 158 aggacacgttagctagaaactgctacaacacttgccgtttcgcgggtggttcccgtccag 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123 aggacacgttagctagaaactgctacaacacttgccgtttcgcgggtggttcccgtccag 182 Query: 218 tctgcgcaggtgcttgtcgttgtaaaatcataagtggtccaaaatgccctagtgactatc 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 tctgcgcaggtgcttgtcgttgtaaaatcataagtggtccaaaatgccctagtgactatc 242 Query: 278 ctaaactgaatcttatccctgaatccggtgaaccagatgtcactcagtactgcaccattg 337 ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 ctaaacttaatcttctccctgaatccggtgaaccagatgtcactcagtactgcaccattg 302 Query: 338 gatgcaggaattctgtctgtgacaacatggacaatgttttccgtggccaagagatgaaat 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 303 gatgcaggaattctgtctgtgacaacatggacaatgttttccgtggccaagagatgaaat 362 Query: 398 tcgacatgggactctgcagcaacgcatgtgcccgtttctgtaatgatggtgcagtcattc 457 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 363 tcgacatgggactctgcagcaacgcatgtgcccgtttttgtaatgatggtgcagtcattc 422 Query: 458 agtctgttgaagcctaatcatgccttcttgtgcatgatttctatggccaaggtcgtatag 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 423 agtctgttgaagcctaatcatgccttcttgtgcatgatttctatggccaaggtcgtattg 482 Query: 518 tcattttgtcttgaataatcttgataccatcagctgtatggaagccaatgtatcatctta 577 ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 483 tcattttgtcttgaataatcttgataccatcagctgtatcgaaggaaatgtatcatctta 542 Query: 578 cttatgtatttgtctttttcccttgttccaataagagtcgccacgatgaatctatttgta 637 |||||| |||| | ||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 543 cttatgcatttctgtttttcccttgttccaataagggtcgccacgatgaatctatttgta 602 Query: 638 cccttggcttaatataaaagttccatggatatattatgtgatac 681 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 603 cccttggcttaatataaaagttccatggatatattatgtgatac 646
>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2) Length = 453 Score = 773 bits (390), Expect = 0.0 Identities = 439/454 (96%), Gaps = 1/454 (0%) Strand = Plus / Plus Query: 216 agtctgcgcaggtgcttgtcgttgtaaaatcataagtggtccaaaatgccctagtgacta 275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agtctgcgcaggtgcttgtcgttgtaaaatcataagtggtccaaaatgccctagtgacta 60 Query: 276 tcctaaactgaatcttatccctgaatccggtgaaccagatgtcactcagtactgcaccat 335 ||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 61 tcctaaacttaatcttctccctgaatccggtgaacccgatgtcactcagtactgcaccat 120 Query: 336 tggatgcaggaattctgtctgtgacaacatggacaatgttttccgtggccaagagatgaa 395 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 tggatgcaggaattctgtctgtgacaacatggacaatgttttccatggccaagagatgaa 180 Query: 396 attcgacatgggactctgcagcaacgcatgtgcccgtttctgtaatgatggtgcagtcat 455 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 181 attcgacatgggactctgcagcaacgcatgtgcccgtttttgtaatgatggtgcagtcat 240 Query: 456 tcagtctgttgaagcctaatcatgccttcttgtgcatgatttctatggccaaggtcgtat 515 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tcagtctgttgaatcctaatcatgccttcttgtgcatgatttctatggccaaggtcgtat 300 Query: 516 agtcattttgtcttgaataatcttgataccatcagctgtatggaagccaatgtatcatct 575 |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 301 tgtcattttgtcttgaataatcttgataccatcagctgtatcgaaggaaatgtatcatct 360 Query: 576 tacttatgtatttgtctttttcccttgttccaataagagtcgccacgatgaatctatttg 635 |||||||| |||| | ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 361 tacttatgcatttctgtttttcccttgttccaataagggtcgccacgatgaatctatttg 420 Query: 636 tacccttggcttaatataaaagttccatggatat 669 ||||||||||||||||| |||||||||||||||| Sbjct: 421 tacccttggcttaatat-aaagttccatggatat 453
>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940 Length = 663 Score = 751 bits (379), Expect = 0.0 Identities = 588/655 (89%), Gaps = 2/655 (0%) Strand = Plus / Plus Query: 22 tctcattcttctggagaaattaaagccaagaagccaaccatggcacccagcaagagtatt 81 ||||||||| || |||||||||| ||||| |||||||||||||| ||| |||||||||| Sbjct: 5 tctcattctacttgagaaattaaggccaaccagccaaccatggcaaccaacaagagtatt 64 Query: 82 aagagtgtggtcatttgtgttctcatactgggtttagttctggagcaggtccaggtggag 141 ||||| ||||| ||||||||||||||| ||||||||||||||||||||||||| || || Sbjct: 65 aagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtccaagtagaa 124 Query: 142 ggaaaaagttgctgcaaggacacgttagctagaaactgctacaacacttgccgtttcgcg 201 | || |||||||||||| ||||| | ||||||||||||||| | ||||||||||| Sbjct: 125 gccaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctgccgtttcgct 184 Query: 202 ggtggttcccgtccagtctgcgcaggtgcttgtcgttgtaaaatcataagtggtccaaaa 261 ||||||||||| |||||||||||| ||||||| |||||||||||||||| || |||| | Sbjct: 185 ggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataagcggcccaaca 244 Query: 262 tgccctagtgactatcctaaactgaatcttatccctgaatccggtgaaccagatgtcact 321 || ||||| ||||||||||| ||||||||| |||||||||||||||||||| ||| ||| Sbjct: 245 tgtcctagggactatcctaagctgaatcttctccctgaatccggtgaaccaaatgcgact 304 Query: 322 cagtactgcaccattggatgcaggaattctgtctgtgacaacatggacaatgttttccgt 381 |||||||||| ||||||||| ||| ||| ||||||||||||||||||||||||| |||| Sbjct: 305 gagtactgcacaattggatgccggacttccgtctgtgacaacatggacaatgtttcccgt 364 Query: 382 ggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaat 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 ggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaat 424 Query: 442 gatggtgcagtcattcagtctgttgaagcctaatcatgccttcttgtgcatgatttctat 501 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 425 gatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgggcatgatttctat 484 Query: 502 ggccaaggtcgtatagtcattttgtcttgaataatcttgataccatcagctgtatggaag 561 |||||||||||| | |||||||| | || || |||||||||||||||| | | || |||| Sbjct: 485 ggccaaggtcgttttgtcattttctgttcaacaatcttgataccatcaccag-atcgaag 543 Query: 562 ccaatgtatcatcttacttatgtatttgt-ctttttcccttgttccaataagagtcgcca 620 | |||||||||||||| |||||||||| | ||||||||| ||||||||||||| ||| Sbjct: 544 caaatgtatcatcttagttatgtatttctgttttttccctcgttccaataagagaaccca 603 Query: 621 cgatgaatctatttgtacccttggcttaatataaaagttccatggatatattatg 675 |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 604 cgatgaatctatttatacccttggcttaatataaaagttccatggatatattatg 658
>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348 Length = 608 Score = 662 bits (334), Expect = 0.0 Identities = 531/594 (89%), Gaps = 2/594 (0%) Strand = Plus / Plus Query: 22 tctcattcttctggagaaattaaagccaagaagccaaccatggcacccagcaagagtatt 81 ||||||||| || |||||||||| ||||| |||||||||||||| ||| |||||||||| Sbjct: 5 tctcattctacttgagaaattaaggccaaccagccaaccatggcaaccaacaagagtatt 64 Query: 82 aagagtgtggtcatttgtgttctcatactgggtttagttctggagcaggtccaggtggag 141 ||||| ||||| ||||||||||||||| ||||||||||||||||||||||||| || || Sbjct: 65 aagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtccaagtagaa 124 Query: 142 ggaaaaagttgctgcaaggacacgttagctagaaactgctacaacacttgccgtttcgcg 201 | || |||||||||||| ||||| | ||||||||||||||| | ||||||||||| Sbjct: 125 gccaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctgccgtttcgct 184 Query: 202 ggtggttcccgtccagtctgcgcaggtgcttgtcgttgtaaaatcataagtggtccaaaa 261 ||||||||||| |||||||||||| ||||||| |||||||||||||||| || |||| | Sbjct: 185 ggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataagcggcccaaca 244 Query: 262 tgccctagtgactatcctaaactgaatcttatccctgaatccggtgaaccagatgtcact 321 || ||||| ||||||||||| ||||||||| |||||||||||||||||||| ||| ||| Sbjct: 245 tgtcctagggactatcctaagctgaatcttctccctgaatccggtgaaccaaatgcgact 304 Query: 322 cagtactgcaccattggatgcaggaattctgtctgtgacaacatggacaatgttttccgt 381 |||||||||| ||||||||| ||| ||| ||||||||||||||||||||||||| |||| Sbjct: 305 gagtactgcacaattggatgccggacttccgtctgtgacaacatggacaatgtttcccgt 364 Query: 382 ggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaat 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 ggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaat 424 Query: 442 gatggtgcagtcattcagtctgttgaagcctaatcatgccttcttgtgcatgatttctat 501 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 425 gatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgggcatgatttctat 484 Query: 502 ggccaaggtcgtatagtcattttgtcttgaataatcttgataccatcagctgtatggaag 561 |||||||||||| | |||||||| | || || |||||||||||||||| | | || |||| Sbjct: 485 ggccaaggtcgttttgtcattttctgttcaacaatcttgataccatcaccag-atcgaag 543 Query: 562 ccaatgtatcatcttacttatgtatttgt-ctttttcccttgttccaataagag 614 | |||||||||||||| |||||||||| | ||||||||| ||||||||||||| Sbjct: 544 caaatgtatcatcttagttatgtatttctgttttttccctcgttccaataagag 597
>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3) Length = 544 Score = 630 bits (318), Expect = e-177 Identities = 488/542 (90%), Gaps = 2/542 (0%) Strand = Plus / Plus Query: 94 atttgtgttctcatactgggtttagttctggagcaggtccaggtggagggaaaaagttgc 153 ||||||||||||||| ||||||||||||||||||||||||| || || || || |||||| Sbjct: 4 atttgtgttctcatattgggtttagttctggagcaggtccaagtagaaggcaagagttgc 63 Query: 154 tgcaaggacacgttagctagaaactgctacaacacttgccgtttcgcgggtggttcccgt 213 |||||| ||||| | ||||||||||||||| | ||||||||||| ||||||||||| Sbjct: 64 tgcaagaacacgacgggcagaaactgctacaacgcctgccgtttcgctggtggttcccga 123 Query: 214 ccagtctgcgcaggtgcttgtcgttgtaaaatcataagtggtccaaaatgccctagtgac 273 |||||||||||| ||||||| |||||||||||||||| || |||| ||| ||||| ||| Sbjct: 124 ccagtctgcgcaactgcttgtggttgtaaaatcataagcggcccaacatgtcctagggac 183 Query: 274 tatcctaaactgaatcttatccctgaatccggtgaaccagatgtcactcagtactgcacc 333 |||||||| ||||||||| |||||||||||||||||||| ||| ||| |||||||||| Sbjct: 184 tatcctaagctgaatcttctccctgaatccggtgaaccaaatgcgactgagtactgcaca 243 Query: 334 attggatgcaggaattctgtctgtgacaacatggacaatgttttccgtggccaagagatg 393 ||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 244 attggatgcaggacttccgtctgtgacaacatggacaatgtttcccgtggccaagagatg 303 Query: 394 aaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaatgatggtgcagtc 453 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 304 aaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaatgatggtgaagtc 363 Query: 454 attcagtctgttgaagcctaatcatgccttcttgtgcatgatttctatggccaaggtcgt 513 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 364 attcagtctcttgaagcctaatcatgccttcttgggcatgatttctatggccaaggtcgt 423 Query: 514 atagtcattttgtcttgaataatcttgataccatcagctgtatggaagccaatgtatcat 573 | |||||||| | || || |||||||||||||||| | || ||||| |||||||||| Sbjct: 424 tttgtcattttctgttcaacaatcttgataccatca-ccacatcgaagcaaatgtatcat 482 Query: 574 cttacttatgtatttgt-ctttttcccttgttccaataagagtcgccacgatgaatctat 632 |||| |||||||||| | ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 483 cttagttatgtatttctgttttttccctcgttccaataagagtcgccacgatgaatctat 542 Query: 633 tt 634 || Sbjct: 543 tt 544
>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872 Length = 540 Score = 626 bits (316), Expect = e-176 Identities = 475/528 (89%) Strand = Plus / Plus Query: 22 tctcattcttctggagaaattaaagccaagaagccaaccatggcacccagcaagagtatt 81 ||||||||| || |||||||||| ||||| |||||||||||||| ||| |||||||||| Sbjct: 5 tctcattctacttgagaaattaaggccaaccagccaaccatggcaaccaacaagagtatt 64 Query: 82 aagagtgtggtcatttgtgttctcatactgggtttagttctggagcaggtccaggtggag 141 ||||| ||||| ||||||||||||||| ||||||||||||||||||||||||| || || Sbjct: 65 aagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtccaagtagaa 124 Query: 142 ggaaaaagttgctgcaaggacacgttagctagaaactgctacaacacttgccgtttcgcg 201 | || |||||||||||| ||||| | ||||||||||||||| | ||||||||||| Sbjct: 125 gccaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctgccgtttcgct 184 Query: 202 ggtggttcccgtccagtctgcgcaggtgcttgtcgttgtaaaatcataagtggtccaaaa 261 ||||||||||| |||||||||||| ||||||| |||||||||||||||| || |||| | Sbjct: 185 ggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataagcggcccaaca 244 Query: 262 tgccctagtgactatcctaaactgaatcttatccctgaatccggtgaaccagatgtcact 321 || ||||| ||||||||||| ||||||||| |||||||||||||||||||| ||| ||| Sbjct: 245 tgtcctagggactatcctaagctgaatcttctccctgaatccggtgaaccaaatgcgact 304 Query: 322 cagtactgcaccattggatgcaggaattctgtctgtgacaacatggacaatgttttccgt 381 |||||||||| ||||||||| ||| ||| ||||||||||||||||||||||||| |||| Sbjct: 305 gagtactgcacaattggatgccggacttccgtctgtgacaacatggacaatgtttcccgt 364 Query: 382 ggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaat 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 ggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaat 424 Query: 442 gatggtgcagtcattcagtctgttgaagcctaatcatgccttcttgtgcatgatttctat 501 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 425 gatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgggcatgatttctat 484 Query: 502 ggccaaggtcgtatagtcattttgtcttgaataatcttgataccatca 549 |||||||||||| | |||||||| | || || |||||||||||||||| Sbjct: 485 ggccaaggtcgttttgtcattttctgttcaacaatcttgataccatca 532
>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds Length = 2406 Score = 597 bits (301), Expect = e-167 Identities = 307/309 (99%) Strand = Plus / Plus Query: 373 gttttccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2031 gttttccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 2090 Query: 433 ttctgtaatgatggtgcagtcattcagtctgttgaagcctaatcatgccttcttgtgcat 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2091 ttctgtaatgatggtgcagtcattcagtctgttgaagcctaatcatgccttcttgtgcat 2150 Query: 493 gatttctatggccaaggtcgtatagtcattttgtcttgaataatcttgataccatcagct 552 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2151 gatttctatggccaaggtcgtattgtcattttgtcttgaataatcttgataccatcagct 2210 Query: 553 gtatggaagccaatgtatcatcttacttatgtatttgtctttttcccttgttccaataag 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2211 gtatggaagccaatgtatcatcttacttatgtatttgtctttttcccttgttccaacaag 2270 Query: 613 agtcgccacgatgaatctatttgtacccttggcttaatataaaagttccatggatatatt 672 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2271 agtcgccacgatgaatctatttgtacccttggcttaatataaaagttccatggatatatt 2330 Query: 673 atgtgatac 681 ||||||||| Sbjct: 2331 atgtgatac 2339 Score = 589 bits (297), Expect = e-165 Identities = 303/305 (99%) Strand = Plus / Plus Query: 2 atcaatccaacatagccatttctcattcttctggagaaattaaagccaagaagccaacca 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1472 atcaatccaacatagccatttctcattcttctggagaaattaaagccaagaagccaacca 1531 Query: 62 tggcacccagcaagagtattaagagtgtggtcatttgtgttctcatactgggtttagttc 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1532 tggcacccagcaagagtattaagagtgtggtcatttgtgttctcatactggttttagttc 1591 Query: 122 tggagcaggtccaggtggagggaaaaagttgctgcaaggacacgttagctagaaactgct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1592 tggagcaggtccaggtggagggaaaaagttgctgcaaggacacgttagctagaaactgct 1651 Query: 182 acaacacttgccgtttcgcgggtggttcccgtccagtctgcgcaggtgcttgtcgttgta 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1652 acaacacttgccgtttcgcgggtggttcccgtccagtctgcgcaggtgcttgtcgttgta 1711 Query: 242 aaatcataagtggtccaaaatgccctagtgactatcctaaactgaatcttatccctgaat 301 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1712 aaatcataagtggtccaaaatgccctagtgactatcctaaactgaatcttctccctgaat 1771 Query: 302 ccggt 306 ||||| Sbjct: 1772 ccggt 1776 Score = 131 bits (66), Expect = 4e-27 Identities = 69/70 (98%) Strand = Plus / Plus Query: 304 ggtgaaccagatgtcactcagtactgcaccattggatgcaggaattctgtctgtgacaac 363 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1868 ggtgaaccagatgtcactcagtactgcaccattggatgcacgaattctgtctgtgacaac 1927 Query: 364 atggacaatg 373 |||||||||| Sbjct: 1928 atggacaatg 1937
>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3) Length = 491 Score = 595 bits (300), Expect = e-167 Identities = 446/492 (90%), Gaps = 2/492 (0%) Strand = Plus / Plus Query: 177 ctgctacaacacttgccgtttcgcgggtggttcccgtccagtctgcgcaggtgcttgtcg 236 |||||||||| | ||||||||||| ||||||||||| |||||||||||| ||||||| | Sbjct: 1 ctgctacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtgg 60 Query: 237 ttgtaaaatcataagtggtccaaaatgccctagtgactatcctaaactgaatcttatccc 296 ||||||||||||||| || |||| || ||||| ||||||||||| ||||||||| |||| Sbjct: 61 ttgtaaaatcataagcggcccaacctgtcctagggactatcctaagctgaatcttctccc 120 Query: 297 tgaatccggtgaaccagatgtcactcagtactgcaccattggatgcaggaattctgtctg 356 |||||||||||||||| ||| ||| |||||||||| ||||||||||||| ||| ||||| Sbjct: 121 tgaatccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtctg 180 Query: 357 tgacaacatggacaatgttttccgtggccaagagatgaaattcgacatgggactctgcag 416 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgacaacctggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcag 240 Query: 417 caacgcatgtgcccgtttctgtaatgatggtgcagtcattcagtctgttgaagcctaatc 476 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 241 caacgcatgtgcccgtttctgtaatgatggtgaagtcattcagtctgttgaagcctaatc 300 Query: 477 atgccttcttgtgcatgatttctatggccaaggtcgtatagtcattttgtcttgaataat 536 ||||||||||| ||||||||||||||||||||||||| | ||||||| | || || ||| Sbjct: 301 atgccttcttgggcatgatttctatggccaaggtcgttttttcattttctgttcaacaat 360 Query: 537 cttgataccatcagctgtatggaagccaatgtatcatcttacttatgtatttgt-ctttt 595 ||||||||||||| | | || ||||| |||||||||||||| |||||||||| | |||| Sbjct: 361 cttgataccatcaccag-atcgaagcaaatgtatcatcttagttatgtatttctgttttt 419 Query: 596 tcccttgttccaataagagtcgccacgatgaatctatttgtacccttggcttaatataaa 655 ||||| ||||||||||||||| ||||||||||||||||| | |||||||||||||||||| Sbjct: 420 tccctcgttccaataagagtcaccacgatgaatctatttatgcccttggcttaatataaa 479 Query: 656 agttccatggat 667 |||||||||||| Sbjct: 480 agttccatggat 491
>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin Length = 414 Score = 496 bits (250), Expect = e-137 Identities = 373/414 (90%) Strand = Plus / Plus Query: 61 atggcacccagcaagagtattaagagtgtggtcatttgtgttctcatactgggtttagtt 120 |||||| ||| ||||||||||||||| ||||| ||||||||||||||| ||||||||||| Sbjct: 1 atggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagtt 60 Query: 121 ctggagcaggtccaggtggagggaaaaagttgctgcaaggacacgttagctagaaactgc 180 |||||||||||||| || || || || |||||||||||| ||||| | ||||||||| Sbjct: 61 ctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgc 120 Query: 181 tacaacacttgccgtttcgcgggtggttcccgtccagtctgcgcaggtgcttgtcgttgt 240 |||||| | |||| |||||| ||||||||||| |||||||||||| ||||||| ||||| Sbjct: 121 tacaacgcctgccatttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgt 180 Query: 241 aaaatcataagtggtccaaaatgccctagtgactatcctaaactgaatcttatccctgaa 300 ||||||||||| || |||| ||| ||||| ||||||||||| ||||||||| |||||||| Sbjct: 181 aaaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaa 240 Query: 301 tccggtgaaccagatgtcactcagtactgcaccattggatgcaggaattctgtctgtgac 360 |||||||||||| ||| ||| |||||||||| ||||||||||||| ||| ||||||||| Sbjct: 241 tccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtctgtgac 300 Query: 361 aacatggacaatgttttccgtggccaagagatgaaattcgacatgggactctgcagcaac 420 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 aacatggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaac 360 Query: 421 gcatgtgcccgtttctgtaatgatggtgcagtcattcagtctgttgaagcctaa 474 |||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 361 gcatgtgcccgtttctgtaatgatggtgatgtcattcagtctgttgaagcctaa 414
>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds Length = 2259 Score = 287 bits (145), Expect = 3e-74 Identities = 265/305 (86%) Strand = Plus / Plus Query: 2 atcaatccaacatagccatttctcattcttctggagaaattaaagccaagaagccaacca 61 ||||||||||| || |||| ||||||||| | |||||||||| ||||| ||||||||| Sbjct: 1493 atcaatccaacgtaaccatatctcattctacatgagaaattaaggccaaccagccaacca 1552 Query: 62 tggcacccagcaagagtattaagagtgtggtcatttgtgttctcatactgggtttagttc 121 ||||| ||| ||||||||||||||| ||||| ||||||||||||||| |||||||||||| Sbjct: 1553 tggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagttc 1612 Query: 122 tggagcaggtccaggtggagggaaaaagttgctgcaaggacacgttagctagaaactgct 181 ||||||||||||| || || || || |||||||||||| ||||| | |||||||||| Sbjct: 1613 tggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgct 1672 Query: 182 acaacacttgccgtttcgcgggtggttcccgtccagtctgcgcaggtgcttgtcgttgta 241 ||||| | ||||||||||| ||||||||||| |||||||||||| ||||||| |||||| Sbjct: 1673 acaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgta 1732 Query: 242 aaatcataagtggtccaaaatgccctagtgactatcctaaactgaatcttatccctgaat 301 |||||||||| || |||| || ||||| ||||||||||| ||||||||| ||||||||| Sbjct: 1733 aaatcataagcggcccaacctgtcctagggactatcctaagctgaatcttctccctgaat 1792 Query: 302 ccggt 306 ||||| Sbjct: 1793 ccggt 1797 Score = 272 bits (137), Expect = 2e-69 Identities = 167/177 (94%) Strand = Plus / Plus Query: 373 gttttccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 432 |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2054 gtttcccgtggccaagagatgaaatttgacatgggactctgcagcaacgcatgtgcccgt 2113 Query: 433 ttctgtaatgatggtgcagtcattcagtctgttgaagcctaatcatgccttcttgtgcat 492 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2114 ttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgggcat 2173 Query: 493 gatttctatggccaaggtcgtatagtcattttgtcttgaataatcttgataccatca 549 ||||||||||||||||||||| | |||||||| | || || |||||||||||||||| Sbjct: 2174 gatttctatggccaaggtcgttttgtcattttctgttcaacaatcttgataccatca 2230 Score = 83.8 bits (42), Expect = 8e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 304 ggtgaaccagatgtcactcagtactgcaccattggatgcaggaattctgtctgtgacaac 363 ||||||||| |||| ||| |||||||||| ||||||||||||| ||| || ||||||||| Sbjct: 1894 ggtgaaccaaatgtgactgagtactgcacaattggatgcaggacttccgtttgtgacaac 1953 Query: 364 atggacaatg 373 |||||||||| Sbjct: 1954 atggacaatg 1963
>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds Length = 641 Score = 180 bits (91), Expect = 4e-42 Identities = 202/239 (84%) Strand = Plus / Plus Query: 273 ctatcctaaactgaatcttatccctgaatccggtgaaccagatgtcactcagtactgcac 332 |||| |||||||| ||||| | | ||||||||||||||| ||||||||| |||||||||| Sbjct: 258 ctattctaaactgcatcttctacttgaatccggtgaaccggatgtcactgagtactgcac 317 Query: 333 cattggatgcaggaattctgtctgtgacaacatggacaatgttttccgtggccaagagat 392 ||| ||||||| || ||| || ||||||||||||||||||||| | | |||||||||||| Sbjct: 318 cataggatgcatgacttccgtttgtgacaacatggacaatgttattcatggccaagagat 377 Query: 393 gaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaatgatggtgcagt 452 |||| |||||||| |||||||| ||| | ||||| ||||||||||| | ||||| || Sbjct: 378 gaaaatcgacatgctactctgcaacaaagaatgtgttcgtttctgtaacaagggtgccgt 437 Query: 453 cattcagtctgttgaagcctaatcatgccttcttgtgcatgatttctatggccaaggtc 511 ||||| ||| | |||| ||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 438 cattccatctttccaagcttaatcatgcactcttgtgcatgatttctttggccgaggtc 496 Score = 85.7 bits (43), Expect = 2e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 58 accatggcacccagcaagagtattaagagtgtggtcatttgtgttctcatactgggttta 117 ||||||||| ||| ||| || ||||| ||||||| ||||||| ||| |||| |||||| Sbjct: 46 accatggcaaccaccaaaggtcttaagtgtgtggtgctttgtgtcctcgtactaggttta 105 Query: 118 gttctggagcaggtccaggtggagggaaaaagttgctgc 156 ||||||| |||||||||||| |||||||| ||||||||| Sbjct: 106 gttctggggcaggtccaggtagagggaaagagttgctgc 144
>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds Length = 678 Score = 123 bits (62), Expect = 9e-25 Identities = 251/314 (79%) Strand = Plus / Plus Query: 52 aagccaaccatggcacccagcaagagtattaagagtgtggtcatttgtgttctcatactg 111 |||||||||||||| | |||||| |||| ||||||| || |||||| | ||||| ||| Sbjct: 73 aagccaaccatggccacaagcaagggtatcaagagtgctgttatttgtttcctcatgctg 132 Query: 112 ggtttagttctggagcaggtccaggtggagggaaaaagttgctgcaaggacacgttagct 171 |||||||||||||||||||||||||| ||||| || |||||||||||| |||| || Sbjct: 133 ggtttagttctggagcaggtccaggtagagggcaagagttgctgcaagagcacgacggca 192 Query: 172 agaaactgctacaacacttgccgtttcgcgggtggttcccgtccagtctgcgcaggtgct 231 | |||||||||||| |||||||| || |||| | | || ||||||||||||||| | Sbjct: 193 ataaactgctacaatgtctgccgtttagctggtgctccgcgcccagtctgcgcaggtcca 252 Query: 232 tgtcgttgtaaaatcataagtggtccaaaatgccctagtgactatcctaaactgaatctt 291 ||| |||||||| || || | | ||| || || ||||| | ||||||| | ||||| Sbjct: 253 tgtggttgtaaactcttagacgttacaacttgtccaagtgattggcctaaacagcatctt 312 Query: 292 atccctgaatccggtgaaccagatgtcactcagtactgcaccattggatgcaggaattct 351 || |||||| ||||||| |||||| || |||||||||| |||||||||| || ||| Sbjct: 313 ctctctgaatacggtgaagcagatgcagctgagtactgcactattggatgcatgacttcc 372 Query: 352 gtctgtgacaacat 365 || ||||||||||| Sbjct: 373 gtttgtgacaacat 386 Score = 85.7 bits (43), Expect = 2e-13 Identities = 112/135 (82%) Strand = Plus / Plus Query: 379 cgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgt 438 ||||||||||||||||| |||||||| | |||||| ||||||||||| |||||||||| Sbjct: 415 cgtggccaagagatgaacatcgacatgcaagtctgcaacaacgcatgtgtccgtttctgt 474 Query: 439 aatgatggtgcagtcattcagtctgttgaagcctaatcatgccttcttgtgcatgatttc 498 || | ||||| |||| || ||||| | |||||||||||| ||| |||| | ||||| Sbjct: 475 aacaagggtgccgtcaatccatctgtcggggcctaatcatgcactctcgtgccttatttc 534 Query: 499 tatggccaaggtcgt 513 |||||||| |||||| Sbjct: 535 tatggccatggtcgt 549
>dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, complete cds Length = 616 Score = 101 bits (51), Expect = 3e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 80 ttaagagtgtggtcatttgtgttctcatactgggtttagttctggagcaggtccaggtgg 139 ||||||||||||||||||||||||| || |||| ||||||||||||| ||||| || | Sbjct: 42 ttaagagtgtggtcatttgtgttcttgtattggggatagttctggagcatgtccaagtag 101 Query: 140 agggaaaaagttgctgcaaggacacgttagctagaaactgctacaac 186 ||||||| ||||||||||||||||| || ||||||||||||||| Sbjct: 102 agggaaagagttgctgcaaggacaccacggcaagaaactgctacaac 148
>dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, complete cds Length = 677 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Plus Query: 80 ttaagagtgtggtcatttgtgttctcatactgggtttagttctggagcaggtccaggtgg 139 |||||||||| ||||||||||| || || |||| ||||||||||||||||||| || | Sbjct: 43 ttaagagtgtagtcatttgtgtccttgtattggggatagttctggagcaggtccaagtag 102 Query: 140 agggaaaaagttgctgcaaggacacgttagctagaaactgctacaac 186 ||||||| |||||||||||||| | | || ||||||||||||||| Sbjct: 103 agggaaagagttgctgcaaggatatcatggcaagaaactgctacaac 149
>emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene Length = 897 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 103 ctcatactgggtttagttctggagcaggtccaggtggagggaaaaagttgctgcaaggac 162 ||||||||||| || |||||||| ||||| || || || ||||| |||||||||||| | Sbjct: 49 ctcatactggggttggttctggaacaggtgcaagtagaaggaaagagttgctgcaagagc 108 Query: 163 acgttagctagaaactgctacaacacttgccgt 195 || ||| ||||||||||||||| ||||||| Sbjct: 109 accctaggaagaaactgctacaacctttgccgt 141
>emb|X96445.1|TAPURA1 T.aestivum Pur-A1 gene Length = 892 Score = 48.1 bits (24), Expect = 0.042 Identities = 69/84 (82%) Strand = Plus / Plus Query: 103 ctcatactgggtttagttctggagcaggtccaggtggagggaaaaagttgctgcaaggac 162 ||||||||||| || |||||||| ||||| || || || || || |||||||||||| | Sbjct: 49 ctcatactggggttggttctggaacaggtgcaagtagaaggcaagagttgctgcaagagc 108 Query: 163 acgttagctagaaactgctacaac 186 || ||| ||||||||||||||| Sbjct: 109 accctaggaagaaactgctacaac 132
>gb|AF004018.1|AF004018 Triticum aestivum beta purothionin precursor, mRNA, complete cds Length = 673 Score = 48.1 bits (24), Expect = 0.042 Identities = 69/84 (82%) Strand = Plus / Plus Query: 103 ctcatactgggtttagttctggagcaggtccaggtggagggaaaaagttgctgcaaggac 162 ||||||||||| || |||||||| ||||| || || || || || |||||||||||| | Sbjct: 57 ctcatactggggttggttctggaacaggtgcaagtagaaggcaagagttgctgcaagagc 116 Query: 163 acgttagctagaaactgctacaac 186 || ||| ||||||||||||||| Sbjct: 117 accctaggaagaaactgctacaac 140
>gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, complete sequence Length = 264425 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Plus Query: 582 tgtatttgtctttttcccttgt 603 |||||||||||||||||||||| Sbjct: 6887 tgtatttgtctttttcccttgt 6908
>gb|AC138101.8| Mus musculus chromosome 5, clone RP23-149H20, complete sequence Length = 211521 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Plus Query: 582 tgtatttgtctttttcccttgt 603 |||||||||||||||||||||| Sbjct: 86346 tgtatttgtctttttcccttgt 86367
>gb|AC125610.4| Homo sapiens 3 BAC RP11-189B7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159706 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Plus Query: 580 tatgtatttgtctttttccctt 601 |||||||||||||||||||||| Sbjct: 85272 tatgtatttgtctttttccctt 85293
>gb|AC013622.12| Mus musculus chromosome 5, clone RP23-232H18, complete sequence Length = 240821 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 582 tgtatttgtctttttcccttgt 603 |||||||||||||||||||||| Sbjct: 41802 tgtatttgtctttttcccttgt 41781
>emb|AL808121.7| Zebrafish DNA sequence from clone CH211-251B22, complete sequence Length = 154450 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 470 cctaatcatgccttcttgtgca 491 |||||||||||||||||||||| Sbjct: 65535 cctaatcatgccttcttgtgca 65514
>gb|AC125194.4| Mus musculus BAC clone RP23-275K6 from chromosome 18, complete sequence Length = 155706 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 579 ttatgtatttgtctttttcccttgt 603 |||||||||| |||||||||||||| Sbjct: 114751 ttatgtatttttctttttcccttgt 114727
>gb|AC122496.2| Mus musculus BAC clone RP24-400K16 from 5, complete sequence Length = 180081 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 658 ttccatggatatattatgtga 678 ||||||||||||||||||||| Sbjct: 155559 ttccatggatatattatgtga 155539
>gb|AC074321.10| Homo sapiens chromosome 10 clone RP11-122F14, complete sequence Length = 177203 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 661 catggatatattatgtgatac 681 ||||||||||||||||||||| Sbjct: 41688 catggatatattatgtgatac 41668
>emb|AL356115.9| Human DNA sequence from clone RP11-486O22 on chromosome 10 Contains the 3' end of a novel gene (KIAA1128, FLJ14262, FLJ25809) , the 5' end of a Siah-interacting protein (SIP) (calcyclin binding protein) pseudogene, ribosomal protein S3A pseudogene 5 (RPS3AP5) and two CpG islands, complete sequence Length = 150151 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 661 catggatatattatgtgatac 681 ||||||||||||||||||||| Sbjct: 8629 catggatatattatgtgatac 8649
>emb|AJ439353.1|AGA439353 Anopheles gambiae BAC clone 30E5 Length = 167014 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 acaacatggacaatgttttcc 379 ||||||||||||||||||||| Sbjct: 34015 acaacatggacaatgttttcc 33995
>emb|AL669931.9| Mouse DNA sequence from clone RP23-31D18 on chromosome 11 Contains the Stc2 gene for stanniocalcin 2 and three CpG islands, complete sequence Length = 252980 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 gaaattaaagccaagaagccaacca 61 |||||||||| |||||||||||||| Sbjct: 18321 gaaattaaagtcaagaagccaacca 18345
>gb|AC013437.8| Homo sapiens BAC clone RP11-190J23 from 2, complete sequence Length = 167424 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 aattctgtctgtgacaacatg 366 ||||||||||||||||||||| Sbjct: 92136 aattctgtctgtgacaacatg 92156
>gb|AC150277.2| Mus musculus BAC clone RP23-97E12 from 18, complete sequence Length = 179399 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 579 ttatgtatttgtctttttcccttgt 603 |||||||||| |||||||||||||| Sbjct: 54564 ttatgtatttttctttttcccttgt 54540 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 129,275,195 Number of extensions: 6821525 Number of successful extensions: 145305 Number of sequences better than 10.0: 31 Number of HSP's gapped: 145284 Number of HSP's successfully gapped: 39 Length of query: 699 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 677 Effective length of database: 18,508,616,841 Effective search space: 12530333601357 Effective search space used: 12530333601357 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)