ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf171i08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK101392:Os03g0107600 | 306 | 1e-83 | 2 | Os04g0119300:Os04g0119300 | 305 | 5e-83 | 3 | AK071651:Os03g0107600 | 305 | 5e-83 | 4 | AK099960:Os12g0405400 | 26 | 2.7 | 5 | AK066879:Os12g0405400 | 26 | 2.7 | 6 | AK105615:Os10g0559800 | 29 | 6.6 |
|---|
>AK101392:Os03g0107600 | Length = 272 Score = 306 bits (785), Expect = 1e-83 Identities = 151/221 (68%), Positives = 173/221 (78%), Gaps = 2/221 (0%) Frame = +3 Query: 141 ESMAWGGLFLSLSRPTPEQQKSCLTAASGFNYDADLHGATNPKSPTALT--NSEDTDKAL 314 +SMAWGGLFLS SRP+ +QQKSCL+AA GFNYDA LHGA+ PKS LT ++E +DKAL Sbjct: 28 KSMAWGGLFLSFSRPSQDQQKSCLSAAGGFNYDAPLHGASRPKSVAKLTAGDTEASDKAL 87 Query: 315 ANRGFSVNRSRVLVGSGADAFRHAKSALLSWKHLALGWAEAEPGTPVKPGARFCICYKEV 494 RGF VNRSRVLVGSG F HAKSALLSWKHLALGWA EP TPVK G RFCICYKE+ Sbjct: 88 VERGFFVNRSRVLVGSGTTTFNHAKSALLSWKHLALGWANVEPDTPVKAGTRFCICYKEL 147 Query: 495 VPWVMFPLQIAYVTDDDCNXXXXXXXXXXXXXXXXXXTLQGHLLAGEERFSVEVDAEERV 674 +PWVM PLQIAYVTD N TLQGHLLAGEERFSV++D +++V Sbjct: 148 IPWVMLPLQIAYVTDG--NGGNSSGHGKGCVFAYGSGTLQGHLLAGEERFSVQLDEDDQV 205 Query: 675 WYEVVSFSKPAHPLSALCYPYVRLRQRHFARESGKAVLRHV 797 WYEV+SFSKPAH LS+LCYPYV+LRQ+HFA +SG+A+LRHV Sbjct: 206 WYEVMSFSKPAHILSSLCYPYVQLRQKHFAHQSGQALLRHV 246
>Os04g0119300:Os04g0119300 | Length = 225 Score = 305 bits (780), Expect = 5e-83 Identities = 150/219 (68%), Positives = 171/219 (78%), Gaps = 2/219 (0%) Frame = +3 Query: 147 MAWGGLFLSLSRPTPEQQKSCLTAASGFNYDADLHGATNPKSPTALT--NSEDTDKALAN 320 MAWGGLFLS SRP+ +QQKSCL+AA GFNYDA LHGA+ PKS LT ++E +DKAL Sbjct: 1 MAWGGLFLSFSRPSQDQQKSCLSAAGGFNYDAPLHGASRPKSVAKLTAGDTEASDKALVE 60 Query: 321 RGFSVNRSRVLVGSGADAFRHAKSALLSWKHLALGWAEAEPGTPVKPGARFCICYKEVVP 500 RGF VNRSRVLVGSG F HAKSALLSWKHLALGWA EP TPVK G RFCICYKE++P Sbjct: 61 RGFFVNRSRVLVGSGTTTFNHAKSALLSWKHLALGWANVEPDTPVKAGTRFCICYKELIP 120 Query: 501 WVMFPLQIAYVTDDDCNXXXXXXXXXXXXXXXXXXTLQGHLLAGEERFSVEVDAEERVWY 680 WVM PLQIAYVTD N TLQGHLLAGEERFSV++D +++VWY Sbjct: 121 WVMLPLQIAYVTDG--NGGNSSGHGKGCVFAYGSGTLQGHLLAGEERFSVQLDEDDQVWY 178 Query: 681 EVVSFSKPAHPLSALCYPYVRLRQRHFARESGKAVLRHV 797 EV+SFSKPAH LS+LCYPYV+LRQ+HFA +SG+A+LRHV Sbjct: 179 EVMSFSKPAHILSSLCYPYVQLRQKHFAHQSGQALLRHV 217
>AK071651:Os03g0107600 | Length = 225 Score = 305 bits (780), Expect = 5e-83 Identities = 150/219 (68%), Positives = 171/219 (78%), Gaps = 2/219 (0%) Frame = +3 Query: 147 MAWGGLFLSLSRPTPEQQKSCLTAASGFNYDADLHGATNPKSPTALT--NSEDTDKALAN 320 MAWGGLFLS SRP+ +QQKSCL+AA GFNYDA LHGA+ PKS LT ++E +DKAL Sbjct: 1 MAWGGLFLSFSRPSQDQQKSCLSAAGGFNYDAPLHGASRPKSVAKLTAGDTEASDKALVE 60 Query: 321 RGFSVNRSRVLVGSGADAFRHAKSALLSWKHLALGWAEAEPGTPVKPGARFCICYKEVVP 500 RGF VNRSRVLVGSG F HAKSALLSWKHLALGWA EP TPVK G RFCICYKE++P Sbjct: 61 RGFFVNRSRVLVGSGTTTFNHAKSALLSWKHLALGWANVEPDTPVKAGTRFCICYKELIP 120 Query: 501 WVMFPLQIAYVTDDDCNXXXXXXXXXXXXXXXXXXTLQGHLLAGEERFSVEVDAEERVWY 680 WVM PLQIAYVTD N TLQGHLLAGEERFSV++D +++VWY Sbjct: 121 WVMLPLQIAYVTDG--NGGNSSGHGKGCVFAYGSGTLQGHLLAGEERFSVQLDEDDQVWY 178 Query: 681 EVVSFSKPAHPLSALCYPYVRLRQRHFARESGKAVLRHV 797 EV+SFSKPAH LS+LCYPYV+LRQ+HFA +SG+A+LRHV Sbjct: 179 EVMSFSKPAHILSSLCYPYVQLRQKHFAHQSGQALLRHV 217
>AK099960:Os12g0405400 | Length = 154 Score = 25.8 bits (55), Expect(2) = 2.7 Identities = 15/39 (38%), Positives = 17/39 (43%) Frame = +1 Query: 4 RLRLPLTLRGCETSPRVAPLAGRSPQRSPASRCRPLYRP 120 R RLP L +P P A S +RSPA P P Sbjct: 12 RRRLPEPLAASSRAPAGPPGAAASSERSPAGAAPPTPPP 50 Score = 23.1 bits (48), Expect(2) = 2.7 Identities = 9/22 (40%), Positives = 10/22 (45%) Frame = +2 Query: 155 GRSLPEPEPPHTGAAEVLPHGC 220 G + P P PPH LP C Sbjct: 42 GAAPPTPPPPHARPTLALPRCC 63
>AK066879:Os12g0405400 | Length = 153 Score = 25.8 bits (55), Expect(2) = 2.7 Identities = 15/39 (38%), Positives = 17/39 (43%) Frame = +1 Query: 4 RLRLPLTLRGCETSPRVAPLAGRSPQRSPASRCRPLYRP 120 R RLP L +P P A S +RSPA P P Sbjct: 11 RRRLPEPLAASSRAPAGPPGAAASSERSPAGAAPPTPPP 49 Score = 23.1 bits (48), Expect(2) = 2.7 Identities = 9/22 (40%), Positives = 10/22 (45%) Frame = +2 Query: 155 GRSLPEPEPPHTGAAEVLPHGC 220 G + P P PPH LP C Sbjct: 41 GAAPPTPPPPHARPTLALPRCC 62
>AK105615:Os10g0559800 | Length = 645 Score = 28.9 bits (63), Expect = 6.6 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = +3 Query: 18 SDTERL*DLATGCPSCRPLA--AALAGQSLPPAISAFRFLNLAESM 149 +D ++L L G P C+PLA A G S P + + N++E + Sbjct: 501 ADEKQLVQLKFGLPDCQPLALFALCTGASSDPMLKVYTAKNISEEL 546 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 26,658,331 Number of extensions: 622950 Number of successful extensions: 2706 Number of sequences better than 10.0: 6 Number of HSP's gapped: 2693 Number of HSP's successfully gapped: 8 Length of query: 362 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 260 Effective length of database: 11,315,673 Effective search space: 2942074980 Effective search space used: 2942074980 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
