| Clone Name | FLbaf171i06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT828851.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA040A08, full insert sequence Length = 1082 Score = 436 bits (220), Expect = e-119 Identities = 556/668 (83%) Strand = Plus / Plus Query: 117 gaaggaagatctcccccctccactcaactccgcctccgagccccctccgctcttcgacgg 176 |||||||| ||||||||| | || | |||| | || ||||||||||| |||||||| || Sbjct: 138 gaaggaagtgctccccccttccctgacctcctcatcggagccccctcccctcttcgatgg 197 Query: 177 caccaccaggttgtatcttgcatatcactgcccgtacgcgcagcgcgcttggattaccag 236 |||||||||||||| |||| || |||||||| |||||||||||||| |||||| |||| Sbjct: 198 aaccaccaggttgtacgttgcgtaccactgcccttacgcgcagcgcgcgtggattgccag 257 Query: 237 gaactgcaagggcttacaggacaagatcaaggtagtcgccatagatctggcagacaggcc 296 ||||| |||||| || ||||| ||||||||| | ||||| || ||||| ||||||||||| Sbjct: 258 gaactacaagggtttgcaggataagatcaagattgtcgcgattgatcttgcagacaggcc 317 Query: 297 agcttggttcaaggagaaagtttacccggacaacaaggtgcctgtcctggagcataacaa 356 ||||||| ||||||||| |||||||| || |||||||| ||| || ||||| ||||| Sbjct: 318 tgcttggtacaaggagaaggtttacccagagaacaaggtaccttcacttgagcacaacaa 377 Query: 357 ccaggtgaaaggagagagcttggatttggtcaagtacattgacagcaactttgatggccc 416 |||||||||||||| |||||||||||||||||||||||||||| ||| || || || || Sbjct: 378 tcaggtgaaaggagaaagcttggatttggtcaagtacattgacaccaatttcgaagggcc 437 Query: 417 ggcattactacctgatgattctgcaaagaagcagtttgctgaggaactgcttgcgttcag 476 |||||||| ||||||||||||| ||| ||||||| |||||||| || ||||||| || Sbjct: 438 agcattactccctgatgattctgagaagcagcagttcgctgaggagcttcttgcgtacac 497 Query: 477 cgatgggtttaatagtgcatttttctcatgcttacgctccaagggagatgtatcagctga 536 |||| ||| || | |||| | ||||| | || | ||||||||||||| | | ||| Sbjct: 498 tgatgcgttcaacaaagcatcgtactcatccatagtcgccaagggagatgtgtgcgatga 557 Query: 537 agctgctgctgctgtggataaaatagaagctgccttgggaaagttcagcgacggaccatt 596 |||| ||||||| | || |||||||||||||| || |||||||| ||| || ||||| Sbjct: 558 ggctgttgctgctcttgacaaaatagaagctgctctgtcaaagttcaacgatggcccatt 617 Query: 597 cttccttggccagttcagtttggtggacattgcatatgtgccgttcatcgaaaggtttca 656 |||||||||||||||||| |||||||||||||| ||||| || || || ||||||||||| Sbjct: 618 cttccttggccagttcagcttggtggacattgcgtatgttccatttattgaaaggtttca 677 Query: 657 gatattctattctggtatcaagaaggatgatatcgccaagggcaggcccaaccttcagaa 716 |||||||| ||||||||| ||||| | |||||| |||||||| | |||||||||||||| Sbjct: 678 gatattcttttctggtataaagaactacgatatcaccaagggccgacccaaccttcagaa 737 Query: 717 atacattgaggaagtgaacaaggtggacgcatatacacagaccaaactggacccacaatt 776 || ||| ||||||||||||||| | | || |||||| | ||||||| ||||||||| || Sbjct: 738 attcatcgaggaagtgaacaagattcatgcctatacagaaaccaaacaggacccacagtt 797 Query: 777 tctgcttg 784 | |||||| Sbjct: 798 tttgcttg 805
>ref|NM_001056286.1| Oryza sativa (japonica cultivar-group) Os03g0283100 (Os03g0283100) mRNA, complete cds Length = 1250 Score = 436 bits (220), Expect = e-119 Identities = 556/668 (83%) Strand = Plus / Plus Query: 117 gaaggaagatctcccccctccactcaactccgcctccgagccccctccgctcttcgacgg 176 |||||||| ||||||||| | || | |||| | || ||||||||||| |||||||| || Sbjct: 208 gaaggaagtgctccccccttccctgacctcctcatcggagccccctcccctcttcgatgg 267 Query: 177 caccaccaggttgtatcttgcatatcactgcccgtacgcgcagcgcgcttggattaccag 236 |||||||||||||| |||| || |||||||| |||||||||||||| |||||| |||| Sbjct: 268 aaccaccaggttgtacgttgcgtaccactgcccttacgcgcagcgcgcgtggattgccag 327 Query: 237 gaactgcaagggcttacaggacaagatcaaggtagtcgccatagatctggcagacaggcc 296 ||||| |||||| || ||||| ||||||||| | ||||| || ||||| ||||||||||| Sbjct: 328 gaactacaagggtttgcaggataagatcaagattgtcgcgattgatcttgcagacaggcc 387 Query: 297 agcttggttcaaggagaaagtttacccggacaacaaggtgcctgtcctggagcataacaa 356 ||||||| ||||||||| |||||||| || |||||||| ||| || ||||| ||||| Sbjct: 388 tgcttggtacaaggagaaggtttacccagagaacaaggtaccttcacttgagcacaacaa 447 Query: 357 ccaggtgaaaggagagagcttggatttggtcaagtacattgacagcaactttgatggccc 416 |||||||||||||| |||||||||||||||||||||||||||| ||| || || || || Sbjct: 448 tcaggtgaaaggagaaagcttggatttggtcaagtacattgacaccaatttcgaagggcc 507 Query: 417 ggcattactacctgatgattctgcaaagaagcagtttgctgaggaactgcttgcgttcag 476 |||||||| ||||||||||||| ||| ||||||| |||||||| || ||||||| || Sbjct: 508 agcattactccctgatgattctgagaagcagcagttcgctgaggagcttcttgcgtacac 567 Query: 477 cgatgggtttaatagtgcatttttctcatgcttacgctccaagggagatgtatcagctga 536 |||| ||| || | |||| | ||||| | || | ||||||||||||| | | ||| Sbjct: 568 tgatgcgttcaacaaagcatcgtactcatccatagtcgccaagggagatgtgtgcgatga 627 Query: 537 agctgctgctgctgtggataaaatagaagctgccttgggaaagttcagcgacggaccatt 596 |||| ||||||| | || |||||||||||||| || |||||||| ||| || ||||| Sbjct: 628 ggctgttgctgctcttgacaaaatagaagctgctctgtcaaagttcaacgatggcccatt 687 Query: 597 cttccttggccagttcagtttggtggacattgcatatgtgccgttcatcgaaaggtttca 656 |||||||||||||||||| |||||||||||||| ||||| || || || ||||||||||| Sbjct: 688 cttccttggccagttcagcttggtggacattgcgtatgttccatttattgaaaggtttca 747 Query: 657 gatattctattctggtatcaagaaggatgatatcgccaagggcaggcccaaccttcagaa 716 |||||||| ||||||||| ||||| | |||||| |||||||| | |||||||||||||| Sbjct: 748 gatattcttttctggtataaagaactacgatatcaccaagggccgacccaaccttcagaa 807 Query: 717 atacattgaggaagtgaacaaggtggacgcatatacacagaccaaactggacccacaatt 776 || ||| ||||||||||||||| | | || |||||| | ||||||| ||||||||| || Sbjct: 808 attcatcgaggaagtgaacaagattcatgcctatacagaaaccaaacaggacccacagtt 867 Query: 777 tctgcttg 784 | |||||| Sbjct: 868 tttgcttg 875
>dbj|AK065887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044J05, full insert sequence Length = 1252 Score = 436 bits (220), Expect = e-119 Identities = 556/668 (83%) Strand = Plus / Plus Query: 117 gaaggaagatctcccccctccactcaactccgcctccgagccccctccgctcttcgacgg 176 |||||||| ||||||||| | || | |||| | || ||||||||||| |||||||| || Sbjct: 209 gaaggaagtgctccccccttccctgacctcctcatcggagccccctcccctcttcgatgg 268 Query: 177 caccaccaggttgtatcttgcatatcactgcccgtacgcgcagcgcgcttggattaccag 236 |||||||||||||| |||| || |||||||| |||||||||||||| |||||| |||| Sbjct: 269 aaccaccaggttgtacgttgcgtaccactgcccttacgcgcagcgcgcgtggattgccag 328 Query: 237 gaactgcaagggcttacaggacaagatcaaggtagtcgccatagatctggcagacaggcc 296 ||||| |||||| || ||||| ||||||||| | ||||| || ||||| ||||||||||| Sbjct: 329 gaactacaagggtttgcaggataagatcaagattgtcgcgattgatcttgcagacaggcc 388 Query: 297 agcttggttcaaggagaaagtttacccggacaacaaggtgcctgtcctggagcataacaa 356 ||||||| ||||||||| |||||||| || |||||||| ||| || ||||| ||||| Sbjct: 389 tgcttggtacaaggagaaggtttacccagagaacaaggtaccttcacttgagcacaacaa 448 Query: 357 ccaggtgaaaggagagagcttggatttggtcaagtacattgacagcaactttgatggccc 416 |||||||||||||| |||||||||||||||||||||||||||| ||| || || || || Sbjct: 449 tcaggtgaaaggagaaagcttggatttggtcaagtacattgacaccaatttcgaagggcc 508 Query: 417 ggcattactacctgatgattctgcaaagaagcagtttgctgaggaactgcttgcgttcag 476 |||||||| ||||||||||||| ||| ||||||| |||||||| || ||||||| || Sbjct: 509 agcattactccctgatgattctgagaagcagcagttcgctgaggagcttcttgcgtacac 568 Query: 477 cgatgggtttaatagtgcatttttctcatgcttacgctccaagggagatgtatcagctga 536 |||| ||| || | |||| | ||||| | || | ||||||||||||| | | ||| Sbjct: 569 tgatgcgttcaacaaagcatcgtactcatccatagtcgccaagggagatgtgtgcgatga 628 Query: 537 agctgctgctgctgtggataaaatagaagctgccttgggaaagttcagcgacggaccatt 596 |||| ||||||| | || |||||||||||||| || |||||||| ||| || ||||| Sbjct: 629 ggctgttgctgctcttgacaaaatagaagctgctctgtcaaagttcaacgatggcccatt 688 Query: 597 cttccttggccagttcagtttggtggacattgcatatgtgccgttcatcgaaaggtttca 656 |||||||||||||||||| |||||||||||||| ||||| || || || ||||||||||| Sbjct: 689 cttccttggccagttcagcttggtggacattgcgtatgttccatttattgaaaggtttca 748 Query: 657 gatattctattctggtatcaagaaggatgatatcgccaagggcaggcccaaccttcagaa 716 |||||||| ||||||||| ||||| | |||||| |||||||| | |||||||||||||| Sbjct: 749 gatattcttttctggtataaagaactacgatatcaccaagggccgacccaaccttcagaa 808 Query: 717 atacattgaggaagtgaacaaggtggacgcatatacacagaccaaactggacccacaatt 776 || ||| ||||||||||||||| | | || |||||| | ||||||| ||||||||| || Sbjct: 809 attcatcgaggaagtgaacaagattcatgcctatacagaaaccaaacaggacccacagtt 868 Query: 777 tctgcttg 784 | |||||| Sbjct: 869 tttgcttg 876
>dbj|AK061849.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-F06, full insert sequence Length = 1029 Score = 436 bits (220), Expect = e-119 Identities = 556/668 (83%) Strand = Plus / Plus Query: 117 gaaggaagatctcccccctccactcaactccgcctccgagccccctccgctcttcgacgg 176 |||||||| ||||||||| | || | |||| | || ||||||||||| |||||||| || Sbjct: 85 gaaggaagtgctccccccttccctgacctcctcatcggagccccctcccctcttcgatgg 144 Query: 177 caccaccaggttgtatcttgcatatcactgcccgtacgcgcagcgcgcttggattaccag 236 |||||||||||||| |||| || |||||||| |||||||||||||| |||||| |||| Sbjct: 145 aaccaccaggttgtacgttgcgtaccactgcccttacgcgcagcgcgcgtggattgccag 204 Query: 237 gaactgcaagggcttacaggacaagatcaaggtagtcgccatagatctggcagacaggcc 296 ||||| |||||| || ||||| ||||||||| | ||||| || ||||| ||||||||||| Sbjct: 205 gaactacaagggtttgcaggataagatcaagattgtcgcgattgatcttgcagacaggcc 264 Query: 297 agcttggttcaaggagaaagtttacccggacaacaaggtgcctgtcctggagcataacaa 356 ||||||| ||||||||| |||||||| || |||||||| ||| || ||||| ||||| Sbjct: 265 tgcttggtacaaggagaaggtttacccagagaacaaggtaccttcacttgagcacaacaa 324 Query: 357 ccaggtgaaaggagagagcttggatttggtcaagtacattgacagcaactttgatggccc 416 |||||||||||||| |||||||||||||||||||||||||||| ||| || || || || Sbjct: 325 tcaggtgaaaggagaaagcttggatttggtcaagtacattgacaccaatttcgaagggcc 384 Query: 417 ggcattactacctgatgattctgcaaagaagcagtttgctgaggaactgcttgcgttcag 476 |||||||| ||||||||||||| ||| ||||||| |||||||| || ||||||| || Sbjct: 385 agcattactccctgatgattctgagaagcagcagttcgctgaggagcttcttgcgtacac 444 Query: 477 cgatgggtttaatagtgcatttttctcatgcttacgctccaagggagatgtatcagctga 536 |||| ||| || | |||| | ||||| | || | ||||||||||||| | | ||| Sbjct: 445 tgatgcgttcaacaaagcatcgtactcatccatagtcgccaagggagatgtgtgcgatga 504 Query: 537 agctgctgctgctgtggataaaatagaagctgccttgggaaagttcagcgacggaccatt 596 |||| ||||||| | || |||||||||||||| || |||||||| ||| || ||||| Sbjct: 505 ggctgttgctgctcttgacaaaatagaagctgctctgtcaaagttcaacgatggcccatt 564 Query: 597 cttccttggccagttcagtttggtggacattgcatatgtgccgttcatcgaaaggtttca 656 |||||||||||||||||| |||||||||||||| ||||| || || || ||||||||||| Sbjct: 565 cttccttggccagttcagcttggtggacattgcgtatgttccatttattgaaaggtttca 624 Query: 657 gatattctattctggtatcaagaaggatgatatcgccaagggcaggcccaaccttcagaa 716 |||||||| ||||||||| ||||| | |||||| |||||||| | |||||||||||||| Sbjct: 625 gatattcttttctggtataaagaactacgatatcaccaagggccgacccaaccttcagaa 684 Query: 717 atacattgaggaagtgaacaaggtggacgcatatacacagaccaaactggacccacaatt 776 || ||| ||||||||||||||| | | || |||||| | ||||||| ||||||||| || Sbjct: 685 attcatcgaggaagtgaacaagattcatgcctatacagaaaccaaacaggacccacagtt 744 Query: 777 tctgcttg 784 | |||||| Sbjct: 745 tttgcttg 752
>gb|AY111952.1| Zea mays CL5438_1 mRNA sequence Length = 1008 Score = 208 bits (105), Expect = 3e-50 Identities = 201/233 (86%) Strand = Plus / Plus Query: 175 ggcaccaccaggttgtatcttgcatatcactgcccgtacgcgcagcgcgcttggattacc 234 ||||||||||||||||| | || |||| ||||||| ||||||||||||||||||| | Sbjct: 108 ggcaccaccaggttgtacgtggcctatctttgcccgttcgcgcagcgcgcttggattgct 167 Query: 235 aggaactgcaagggcttacaggacaagatcaaggtagtcgccatagatctggcagacagg 294 || |||| |||||| ||||||||||||| ||| |||| ||||| ||||| || |||||| Sbjct: 168 agaaactacaagggtctacaggacaagattaagatagttgccatcgatctcgctgacagg 227 Query: 295 ccagcttggttcaaggagaaagtttacccggacaacaaggtgcctgtcctggagcataac 354 ||||| |||| ||||||||| ||||| || || |||||||||||| || ||||| || Sbjct: 228 ccagcgtggtacaaggagaaggtttatccagaaaacaaggtgccttctctagagcacgac 287 Query: 355 aaccaggtgaaaggagagagcttggatttggtcaagtacattgacagcaactt 407 |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 288 aaccaggtgaaaggagagagcttggatttggttaagtacattgacagcaactt 340 Score = 151 bits (76), Expect = 6e-33 Identities = 184/220 (83%) Strand = Plus / Plus Query: 551 tggataaaatagaagctgccttgggaaagttcagcgacggaccattcttccttggccagt 610 |||| |||||||||| ||| |||| || |||| |||||| || ||||||||||| |||| Sbjct: 484 tggacaaaatagaagacgccctggggaaattcaacgacggcccgttcttccttggtcagt 543 Query: 611 tcagtttggtggacattgcatatgtgccgttcatcgaaaggtttcagatattctattctg 670 ||||| |||||||| |||| ||||| ||||||||||| ||| |||||||| ||||||| Sbjct: 544 tcagtctggtggacgttgcgtatgtaccgttcatcgagaggcttcagatactctattcca 603 Query: 671 gtatcaagaaggatgatatcgccaagggcaggcccaaccttcagaaatacattgaggaag 730 || ||||| |||| ||| | |||||||| |||||||||||||||| ||| ||||||| Sbjct: 604 ccataaagaactatgacatcacaaagggcagacccaaccttcagaaattcatcgaggaag 663 Query: 731 tgaacaaggtggacgcatatacacagaccaaactggaccc 770 |||||||| | || || || |||||||| ||||||||||| Sbjct: 664 tgaacaagatcgatgcgtacacacagactaaactggaccc 703
>gb|AY108092.1| Zea mays PCO124824 mRNA sequence Length = 658 Score = 153 bits (77), Expect = 2e-33 Identities = 215/261 (82%) Strand = Plus / Plus Query: 513 ctccaagggagatgtatcagctgaagctgctgctgctgtggataaaatagaagctgcctt 572 |||||||| |||||| || | ||||||| |||||| ||||||||||| || ||| | Sbjct: 55 ctccaaggaagatgtgtctgaggaagctgtcgctgctttggataaaataaaaaacgccct 114 Query: 573 gggaaagttcagcgacggaccattcttccttggccagttcagtttggtggacattgcata 632 || || |||| ||| || ||||||| |||||| ||||||||| ||||||||||||| || Sbjct: 115 cgggaaattcaacgagggtccattctcccttggtcagttcagtctggtggacattgcgta 174 Query: 633 tgtgccgttcatcgaaaggtttcagatattctattctggtatcaagaaggatgatatcgc 692 ||| || |||||||| |||||||||||||||||||| || ||||| ||||||| | Sbjct: 175 tgtaccattcatcgagaggtttcagatattctattccaacataaagaactatgatattac 234 Query: 693 caagggcaggcccaaccttcagaaatacattgaggaagtgaacaaggtggacgcatatac 752 |||||||| |||||||||||||| | ||||||||||||| ||||| | || ||||| || Sbjct: 235 aaagggcagacccaaccttcagaagttcattgaggaagtggacaagattgatgcatacac 294 Query: 753 acagaccaaactggacccaca 773 |||||| |||| ||||||||| Sbjct: 295 acagactaaacaggacccaca 315
>gb|DQ245388.1| Zea mays clone 14971 mRNA sequence Length = 1055 Score = 117 bits (59), Expect = 9e-23 Identities = 218/271 (80%) Strand = Plus / Plus Query: 150 ctccgagccccctccgctcttcgacggcaccaccaggttgtatcttgcatatcactgccc 209 ||||||||||||||| |||||||| ||||||||||| |||| || || |||||| Sbjct: 169 ctccgagccccctcccctcttcgatggcaccaccagactgtacatttgctacatctgccc 228 Query: 210 gtacgcgcagcgcgcttggattaccaggaactgcaagggcttacaggacaagatcaaggt 269 || || |||||||| ||| ||||| |||||||||||||| | ||||| |||||||| | Sbjct: 229 gtttgctcagcgcgcctgggttacccggaactgcaagggcctgcaggaggagatcaagct 288 Query: 270 agtcgccatagatctggcagacaggccagcttggttcaaggagaaagtttacccggacaa 329 |||||||| |||||| |||| |||||| |||| ||||||||| |||||||| | Sbjct: 289 ggtcgccatcaatctggaggacaagccagcatggtacaaggagaaggtttacccacaggg 348 Query: 330 caaggtgcctgtcctggagcataacaaccaggtgaaaggagagagcttggatttggtcaa 389 || ||||||| ||||||||| || | |||| | |||||||||||||||||| |||| Sbjct: 349 cacggtgccttccctggagcacgacggcaaggtcaccggagagagcttggatttgatcaa 408 Query: 390 gtacattgacagcaactttgatggcccggca 420 |||||| ||||||||||| | ||||||||| Sbjct: 409 gtacatcgacagcaacttccacggcccggca 439 Score = 69.9 bits (35), Expect = 2e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 535 gaagctgctgctgctgtggataaaatagaagctgccttgggaaagttcagcgacggacca 594 ||||||| ||||||| | || || || |||||||||||| |||||||||||||| || Sbjct: 554 gaagctgttgctgctctagacaagatcgaagctgccttgtccaagttcagcgacggcccg 613 Query: 595 ttcttccttggccagttcagtttggtggacattgc 629 |||||||||||||| || || |||||||| ||||| Sbjct: 614 ttcttccttggccaatttagcttggtggatattgc 648
>ref|NM_001056287.1| Oryza sativa (japonica cultivar-group) Os03g0283200 (Os03g0283200) mRNA, complete cds Length = 1045 Score = 107 bits (54), Expect = 8e-20 Identities = 147/178 (82%) Strand = Plus / Plus Query: 144 ctccgcctccgagccccctccgctcttcgacggcaccaccaggttgtatcttgcatatca 203 ||||||||| |||||||||| ||||||||||||||||||||| | || || || Sbjct: 89 ctccgcctctgagccccctcgcctcttcgacggcaccaccaggctttacatttgctactt 148 Query: 204 ctgcccgtacgcgcagcgcgcttggattaccaggaactgcaagggcttacaggacaagat 263 |||||||| || |||||||||||||||| |||||||| ||||||||| ||||||||||| Sbjct: 149 ctgcccgtttgctcagcgcgcttggattatcaggaacttcaagggcttgcaggacaagat 208 Query: 264 caaggtagtcgccatagatctggcagacaggccagcttggttcaaggagaaagtttac 321 | || |||||| ||| |||||| |||| |||||||||| ||| ||||| |||||| Sbjct: 209 cgagctagtcggcattgatctgcaggacaaaccagcttggtacaaagagaaggtttac 266 Score = 61.9 bits (31), Expect = 4e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 543 tgctgctgtggataaaatagaagctgccttgggaaagttcagcgacggaccattcttcct 602 ||||||| |||| || |||||||||||| || |||||| | || || ||||||||||| Sbjct: 488 tgctgctctggacaagatagaagctgccctgtcgaagttcggtgatggtccattcttcct 547 Query: 603 tggccagttcagtttggtggacattgcatatgtgccgttcatcgaaaggtttcagatat 661 ||| || || || |||||||||||||| |||||| | | || |||||| ||||||||| Sbjct: 548 tggacaatttagcttggtggacattgcgtatgtgacaattattgaaaggattcagatat 606
>gb|AF237487.2|AF237487 Oryza sativa XIG mRNA, complete cds Length = 1058 Score = 107 bits (54), Expect = 8e-20 Identities = 147/178 (82%) Strand = Plus / Plus Query: 144 ctccgcctccgagccccctccgctcttcgacggcaccaccaggttgtatcttgcatatca 203 ||||||||| |||||||||| ||||||||||||||||||||| | || || || Sbjct: 89 ctccgcctctgagccccctcgcctcttcgacggcaccaccaggctttacatttgctactt 148 Query: 204 ctgcccgtacgcgcagcgcgcttggattaccaggaactgcaagggcttacaggacaagat 263 |||||||| || |||||||||||||||| |||||||| ||||||||| ||||||||||| Sbjct: 149 ctgcccgtttgctcagcgcgcttggattatcaggaacttcaagggcttgcaggacaagat 208 Query: 264 caaggtagtcgccatagatctggcagacaggccagcttggttcaaggagaaagtttac 321 | || |||||| ||| |||||| |||| |||||||||| ||| ||||| |||||| Sbjct: 209 cgagctagtcggcattgatctgcaggacaaaccagcttggtacaaagagaaggtttac 266 Score = 61.9 bits (31), Expect = 4e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 543 tgctgctgtggataaaatagaagctgccttgggaaagttcagcgacggaccattcttcct 602 ||||||| |||| || |||||||||||| || |||||| | || || ||||||||||| Sbjct: 488 tgctgctctggacaagatagaagctgccctgtcgaagttcggtgatggtccattcttcct 547 Query: 603 tggccagttcagtttggtggacattgcatatgtgccgttcatcgaaaggtttcagatat 661 ||| || || || |||||||||||||| |||||| | | || |||||| ||||||||| Sbjct: 548 tggacaatttagcttggtggacattgcgtatgtgacaattattgaaaggattcagatat 606
>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete sequence Length = 165113 Score = 99.6 bits (50), Expect = 2e-17 Identities = 95/110 (86%) Strand = Plus / Minus Query: 618 ggtggacattgcatatgtgccgttcatcgaaaggtttcagatattctattctggtatcaa 677 |||||||||||| ||||| || || || ||||||||||||||||||| ||||||||| || Sbjct: 105971 ggtggacattgcgtatgttccatttattgaaaggtttcagatattcttttctggtataaa 105912 Query: 678 gaaggatgatatcgccaagggcaggcccaaccttcagaaatacattgagg 727 ||| | |||||| |||||||| | |||||||||||||||| ||| |||| Sbjct: 105911 gaactacgatatcaccaagggccgacccaaccttcagaaattcatcgagg 105862 Score = 95.6 bits (48), Expect = 3e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 346 gagcataacaaccaggtgaaaggagagagcttggatttggtcaagtacattgacagcaac 405 ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 106560 gagcacaacaatcaggtgaaaggagaaagcttggatttggtcaagtacattgacaccaat 106501 Query: 406 tttgatggcccggcattactacctgatg 433 || || || || |||||||| ||||||| Sbjct: 106500 ttcgaagggccagcattactccctgatg 106473 Score = 77.8 bits (39), Expect = 7e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 253 caggacaagatcaaggtagtcgccatagatctggcagacaggccagcttggttcaaggag 312 ||||| ||||||||| | ||||| || ||||| ||||||||||| ||||||| ||||||| Sbjct: 107066 caggataagatcaagattgtcgcgattgatcttgcagacaggcctgcttggtacaaggag 107007 Query: 313 aaagtttacccggacaacaaggt 335 || |||||||| || |||||||| Sbjct: 107006 aaggtttacccagagaacaaggt 106984 Score = 67.9 bits (34), Expect = 7e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 543 tgctgctgtggataaaatagaagctgccttgggaaagttcagcgacggaccattcttcct 602 ||||||| | || |||||||||||||| || |||||||| ||| || ||||||||||| Sbjct: 106160 tgctgctcttgacaaaatagaagctgctctgtcaaagttcaacgatggcccattcttcct 106101 Query: 603 tggccagttcagtttggt 620 |||||||||||| ||||| Sbjct: 106100 tggccagttcagcttggt 106083 Score = 65.9 bits (33), Expect = 3e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 183 caggttgtatcttgcatatcactgcccgtacgcgcagcgcgcttggattaccaggaactg 242 ||||||||| |||| || |||||||| |||||||||||||| |||||| ||||||||| Sbjct: 107295 caggttgtacgttgcgtaccactgcccttacgcgcagcgcgcgtggattgccaggaacta 107236 Query: 243 caagg 247 ||||| Sbjct: 107235 caagg 107231 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 144 ctccgcctccgagccccctccgctcttcgacggcaccaccaggt 187 ||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 112558 ctccgcctctgagccccctcgcctcttcgacggcaccaccaggt 112515 Score = 50.1 bits (25), Expect = 0.017 Identities = 64/77 (83%) Strand = Plus / Minus Query: 245 agggcttacaggacaagatcaaggtagtcgccatagatctggcagacaggccagcttggt 304 ||||||| |||||||||||| || |||||| ||| |||||| |||| |||||||||| Sbjct: 112234 agggcttgcaggacaagatcgagctagtcggcattgatctgcaggacaaaccagcttggt 112175 Query: 305 tcaaggagaaagtttac 321 ||| ||||| |||||| Sbjct: 112174 acaaagagaaggtttac 112158 Score = 48.1 bits (24), Expect = 0.067 Identities = 39/44 (88%) Strand = Plus / Minus Query: 204 ctgcccgtacgcgcagcgcgcttggattaccaggaactgcaagg 247 |||||||| || |||||||||||||||| |||||||| ||||| Sbjct: 112390 ctgcccgtttgctcagcgcgcttggattatcaggaacttcaagg 112347 Score = 46.1 bits (23), Expect = 0.26 Identities = 59/71 (83%) Strand = Plus / Minus Query: 117 gaaggaagatctcccccctccactcaactccgcctccgagccccctccgctcttcgacgg 176 |||||||| ||||||||| | || | |||| | || ||||||||||| |||||||| || Sbjct: 107492 gaaggaagtgctccccccttccctgacctcctcatcggagccccctcccctcttcgatgg 107433 Query: 177 caccaccaggt 187 |||||||||| Sbjct: 107432 aaccaccaggt 107422
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 99.6 bits (50), Expect = 2e-17 Identities = 95/110 (86%) Strand = Plus / Minus Query: 618 ggtggacattgcatatgtgccgttcatcgaaaggtttcagatattctattctggtatcaa 677 |||||||||||| ||||| || || || ||||||||||||||||||| ||||||||| || Sbjct: 9683193 ggtggacattgcgtatgttccatttattgaaaggtttcagatattcttttctggtataaa 9683134 Query: 678 gaaggatgatatcgccaagggcaggcccaaccttcagaaatacattgagg 727 ||| | |||||| |||||||| | |||||||||||||||| ||| |||| Sbjct: 9683133 gaactacgatatcaccaagggccgacccaaccttcagaaattcatcgagg 9683084 Score = 95.6 bits (48), Expect = 3e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 346 gagcataacaaccaggtgaaaggagagagcttggatttggtcaagtacattgacagcaac 405 ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 9683782 gagcacaacaatcaggtgaaaggagaaagcttggatttggtcaagtacattgacaccaat 9683723 Query: 406 tttgatggcccggcattactacctgatg 433 || || || || |||||||| ||||||| Sbjct: 9683722 ttcgaagggccagcattactccctgatg 9683695 Score = 77.8 bits (39), Expect = 7e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 253 caggacaagatcaaggtagtcgccatagatctggcagacaggccagcttggttcaaggag 312 ||||| ||||||||| | ||||| || ||||| ||||||||||| ||||||| ||||||| Sbjct: 9684288 caggataagatcaagattgtcgcgattgatcttgcagacaggcctgcttggtacaaggag 9684229 Query: 313 aaagtttacccggacaacaaggt 335 || |||||||| || |||||||| Sbjct: 9684228 aaggtttacccagagaacaaggt 9684206 Score = 67.9 bits (34), Expect = 7e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 543 tgctgctgtggataaaatagaagctgccttgggaaagttcagcgacggaccattcttcct 602 ||||||| | || |||||||||||||| || |||||||| ||| || ||||||||||| Sbjct: 9683382 tgctgctcttgacaaaatagaagctgctctgtcaaagttcaacgatggcccattcttcct 9683323 Query: 603 tggccagttcagtttggt 620 |||||||||||| ||||| Sbjct: 9683322 tggccagttcagcttggt 9683305 Score = 65.9 bits (33), Expect = 3e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 183 caggttgtatcttgcatatcactgcccgtacgcgcagcgcgcttggattaccaggaactg 242 ||||||||| |||| || |||||||| |||||||||||||| |||||| ||||||||| Sbjct: 9684517 caggttgtacgttgcgtaccactgcccttacgcgcagcgcgcgtggattgccaggaacta 9684458 Query: 243 caagg 247 ||||| Sbjct: 9684457 caagg 9684453 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 144 ctccgcctccgagccccctccgctcttcgacggcaccaccaggt 187 ||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 9689780 ctccgcctctgagccccctcgcctcttcgacggcaccaccaggt 9689737 Score = 50.1 bits (25), Expect = 0.017 Identities = 64/77 (83%) Strand = Plus / Minus Query: 245 agggcttacaggacaagatcaaggtagtcgccatagatctggcagacaggccagcttggt 304 ||||||| |||||||||||| || |||||| ||| |||||| |||| |||||||||| Sbjct: 9689456 agggcttgcaggacaagatcgagctagtcggcattgatctgcaggacaaaccagcttggt 9689397 Query: 305 tcaaggagaaagtttac 321 ||| ||||| |||||| Sbjct: 9689396 acaaagagaaggtttac 9689380 Score = 48.1 bits (24), Expect = 0.067 Identities = 39/44 (88%) Strand = Plus / Minus Query: 204 ctgcccgtacgcgcagcgcgcttggattaccaggaactgcaagg 247 |||||||| || |||||||||||||||| |||||||| ||||| Sbjct: 9689612 ctgcccgtttgctcagcgcgcttggattatcaggaacttcaagg 9689569 Score = 46.1 bits (23), Expect = 0.26 Identities = 59/71 (83%) Strand = Plus / Minus Query: 117 gaaggaagatctcccccctccactcaactccgcctccgagccccctccgctcttcgacgg 176 |||||||| ||||||||| | || | |||| | || ||||||||||| |||||||| || Sbjct: 9684714 gaaggaagtgctccccccttccctgacctcctcatcggagccccctcccctcttcgatgg 9684655 Query: 177 caccaccaggt 187 |||||||||| Sbjct: 9684654 aaccaccaggt 9684644
>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence Length = 405672 Score = 77.8 bits (39), Expect = 7e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 353 acaaccaggtgaaaggagagagcttggatttggtcaagtacattgacagcaactt 407 ||||||| ||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 241449 acaaccatatgaaaggagagagcttggatttggttaagtatattgacagcaactt 241503 Score = 48.1 bits (24), Expect = 0.067 Identities = 42/48 (87%) Strand = Plus / Plus Query: 289 gacaggccagcttggttcaaggagaaagtttacccggacaacaaggtg 336 ||||||||||| |||| ||||||||| ||||| || || ||||||||| Sbjct: 241257 gacaggccagcgtggtacaaggagaaggtttatccagaaaacaaggtg 241304
>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence Length = 323584 Score = 77.8 bits (39), Expect = 7e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 353 acaaccaggtgaaaggagagagcttggatttggtcaagtacattgacagcaactt 407 ||||||| ||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 226937 acaaccatatgaaaggagagagcttggatttggttaagtatattgacagcaactt 226991 Score = 48.1 bits (24), Expect = 0.067 Identities = 42/48 (87%) Strand = Plus / Plus Query: 289 gacaggccagcttggttcaaggagaaagtttacccggacaacaaggtg 336 ||||||||||| |||| ||||||||| ||||| || || ||||||||| Sbjct: 226745 gacaggccagcgtggtacaaggagaaggtttatccagaaaacaaggtg 226792
>emb|Y17386.1|TAE17386 Triticum aestivum mRNA for putative In2.1-like protein Length = 1031 Score = 69.9 bits (35), Expect = 2e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 535 gaagctgctgctgctgtggataaaatagaagctgccttgggaaagttcagcgacggacca 594 ||||||| ||||||| | || || || ||||||||| || |||||||||||||| || Sbjct: 486 gaagctgttgctgctctagacaagatcgaagctgccctgtccaagttcagcgacggcccg 545 Query: 595 ttcttccttggccagttcagtttggtggacattgc 629 |||||||||||||| || || |||||||||||||| Sbjct: 546 ttcttccttggccaatttagcttggtggacattgc 580 Score = 54.0 bits (27), Expect = 0.001 Identities = 195/251 (77%) Strand = Plus / Plus Query: 150 ctccgagccccctccgctcttcgacggcaccaccaggttgtatcttgcatatcactgccc 209 ||||||||||||||| ||||| || ||||||||||| ||||| || || |||||| Sbjct: 101 ctccgagccccctcccctctttgatggcaccaccagactgtatatttgctacatctgccc 160 Query: 210 gtacgcgcagcgcgcttggattaccaggaactgcaagggcttacaggacaagatcaaggt 269 || || || || || ||| | ||| ||||||||||||| | ||||| |||||||| | Sbjct: 161 gtttgctcaacgtgcctgggtgacccggaactgcaagggtctgcaggaggagatcaagct 220 Query: 270 agtcgccatagatctggcagacaggccagcttggttcaaggagaaagtttacccggacaa 329 |||||||| |||||| |||| ||||| |||| ||||||||| |||||||| | Sbjct: 221 ggtcgccatcaatctggaggacaaaccagcatggtacaaggagaaggtttacccacaggg 280 Query: 330 caaggtgcctgtcctggagcataacaaccaggtgaaaggagagagcttggatttggtcaa 389 || ||||||| ||||||||| || | ||| | |||||||||||||||||| |||| Sbjct: 281 cacggtgccttccctggagcacgacggcagggtcaccggagagagcttggatttgatcaa 340 Query: 390 gtacattgaca 400 |||||| |||| Sbjct: 341 gtacatcgaca 351
>emb|X58573.1|ZMIN21 Maize In2-1 mRNA Length = 906 Score = 60.0 bits (30), Expect = 2e-05 Identities = 204/262 (77%) Strand = Plus / Plus Query: 204 ctgcccgtacgcgcagcgcgcttggattaccaggaactgcaagggcttacaggacaagat 263 |||||||| ||| |||||||| ||| | |||||||||| ||||| || ||||||||||| Sbjct: 140 ctgcccgttcgctcagcgcgcctgggtcaccaggaacttgaagggtttgcaggacaagat 199 Query: 264 caaggtagtcgccatagatctggcagacaggccagcttggttcaaggagaaagtttaccc 323 || | || ||||| |||||| |||| || ||||||| |||||| || |||||| | Sbjct: 200 ggagctggtggccatcgatctgcaggacaaaccggcttggtacaaggacaaggtttacgc 259 Query: 324 ggacaacaaggtgcctgtcctggagcataacaaccaggtgaaaggagagagcttggattt 383 | || ||||||| ||||||||| ||| | |||| | || ||||||||||| | Sbjct: 260 acagggcacggtgccttccctggagcacgacagcgaggtcaggggcgagagcttggacct 319 Query: 384 ggtcaagtacattgacagcaactttgatggcccggcattactacctgatgattctgcaaa 443 | ||| |||||| |||||||||||||| ||||| || | || || || ||| |||| || Sbjct: 320 gatcaggtacatcgacagcaactttgacggccccgcgctgctcccagaggatgctgcgaa 379 Query: 444 gaagcagtttgctgaggaactg 465 || |||||||||||| |||||| Sbjct: 380 gaggcagtttgctgacgaactg 401
>ref|NM_115362.1| Arabidopsis thaliana unknown protein (AT3G55040) mRNA, complete cds Length = 879 Score = 54.0 bits (27), Expect = 0.001 Identities = 45/51 (88%) Strand = Plus / Plus Query: 290 acaggccagcttggttcaaggagaaagtttacccggacaacaaggtgcctg 340 ||||||| ||||||| ||||||||||||||| ||| ||||||||||||| Sbjct: 350 acaggcctgcttggtataaggagaaagtttactcggctaacaaggtgcctg 400
>gb|AF249913.1|AF249913 Glycine max In2-1 protein mRNA, complete cds Length = 1024 Score = 54.0 bits (27), Expect = 0.001 Identities = 45/51 (88%) Strand = Plus / Plus Query: 288 agacaggccagcttggttcaaggagaaagtttacccggacaacaaggtgcc 338 ||||||||||||||||| ||||||||||| ||||| || || |||||||| Sbjct: 225 agacaggccagcttggtataaggagaaagtctaccctgaaaataaggtgcc 275 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 592 ccattcttccttggccagttcagtttggtggacattgc 629 |||||||| |||||||| |||||||||||||| ||||| Sbjct: 523 ccattcttgcttggccaattcagtttggtggatattgc 560 Score = 44.1 bits (22), Expect = 1.0 Identities = 37/42 (88%) Strand = Plus / Plus Query: 150 ctccgagccccctccgctcttcgacggcaccaccaggttgta 191 |||||| || ||||| || ||||| ||||||||||||||||| Sbjct: 87 ctccgacccacctcctcttttcgatggcaccaccaggttgta 128
>dbj|AK118180.1| Arabidopsis thaliana At3g55040 mRNA for unknown protein, complete cds, clone: RAFL19-50-A15 Length = 1028 Score = 54.0 bits (27), Expect = 0.001 Identities = 45/51 (88%) Strand = Plus / Plus Query: 290 acaggccagcttggttcaaggagaaagtttacccggacaacaaggtgcctg 340 ||||||| ||||||| ||||||||||||||| ||| ||||||||||||| Sbjct: 335 acaggcctgcttggtataaggagaaagtttactcggctaacaaggtgcctg 385
>gb|AC172870.1| Brassica rapa subsp. pekinensis clone KBrH004A06, complete sequence Length = 145603 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 290 acaggccagcttggttcaaggagaaagtttacccggacaacaaggtg 336 ||||||| ||||||| |||||||||||| ||||||| ||||||||| Sbjct: 20644 acaggcctgcttggtacaaggagaaagtgtacccggctaacaaggtg 20690
>emb|CT573148.13| Zebrafish DNA sequence from clone DKEY-253E1 in linkage group 9, complete sequence Length = 187867 Score = 48.1 bits (24), Expect = 0.067 Identities = 24/24 (100%) Strand = Plus / Minus Query: 840 atgccaaggagccaccgcagcata 863 |||||||||||||||||||||||| Sbjct: 123385 atgccaaggagccaccgcagcata 123362
>emb|CR848718.8| Zebrafish DNA sequence from clone DKEY-5N8 in linkage group 9, complete sequence Length = 253450 Score = 48.1 bits (24), Expect = 0.067 Identities = 24/24 (100%) Strand = Plus / Minus Query: 840 atgccaaggagccaccgcagcata 863 |||||||||||||||||||||||| Sbjct: 101453 atgccaaggagccaccgcagcata 101430
>gb|AC145958.3| Gallus gallus BAC clone CH261-16J12 from chromosome unknown, complete sequence Length = 207441 Score = 48.1 bits (24), Expect = 0.067 Identities = 24/24 (100%) Strand = Plus / Minus Query: 142 aactccgcctccgagccccctccg 165 |||||||||||||||||||||||| Sbjct: 182230 aactccgcctccgagccccctccg 182207
>ref|NM_001056285.1| Oryza sativa (japonica cultivar-group) Os03g0283000 (Os03g0283000) mRNA, complete cds Length = 1081 Score = 46.1 bits (23), Expect = 0.26 Identities = 38/43 (88%) Strand = Plus / Plus Query: 592 ccattcttccttggccagttcagtttggtggacattgcatatg 634 ||||||||||||||||| || ||| |||| |||||||| |||| Sbjct: 528 ccattcttccttggccaatttagtctggttgacattgcgtatg 570
>dbj|AK227162.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL09-87-D11 Length = 977 Score = 46.1 bits (23), Expect = 0.26 Identities = 41/47 (87%) Strand = Plus / Plus Query: 292 aggccagcttggttcaaggagaaagtttacccggacaacaaggtgcc 338 ||||| ||||||| |||||||||||| || || || ||||||||||| Sbjct: 232 aggcctgcttggtacaaggagaaagtatatccagagaacaaggtgcc 278
>ref|NM_120357.3| Arabidopsis thaliana unknown protein (AT5G02790) mRNA, complete cds Length = 988 Score = 46.1 bits (23), Expect = 0.26 Identities = 41/47 (87%) Strand = Plus / Plus Query: 292 aggccagcttggttcaaggagaaagtttacccggacaacaaggtgcc 338 ||||| ||||||| |||||||||||| || || || ||||||||||| Sbjct: 244 aggcctgcttggtacaaggagaaagtatatccagagaacaaggtgcc 290
>ref|NM_120356.2| Arabidopsis thaliana unknown protein (AT5G02780) mRNA, complete cds Length = 812 Score = 46.1 bits (23), Expect = 0.26 Identities = 26/27 (96%) Strand = Plus / Plus Query: 292 aggccagcttggttcaaggagaaagtt 318 |||||||||||||| |||||||||||| Sbjct: 202 aggccagcttggttaaaggagaaagtt 228
>gb|BT012424.1| Arabidopsis thaliana At5g02780 mRNA, complete cds Length = 714 Score = 46.1 bits (23), Expect = 0.26 Identities = 26/27 (96%) Strand = Plus / Plus Query: 292 aggccagcttggttcaaggagaaagtt 318 |||||||||||||| |||||||||||| Sbjct: 202 aggccagcttggttaaaggagaaagtt 228
>gb|BT010718.1| Arabidopsis thaliana At5g02780 mRNA, complete cds Length = 993 Score = 46.1 bits (23), Expect = 0.26 Identities = 26/27 (96%) Strand = Plus / Plus Query: 292 aggccagcttggttcaaggagaaagtt 318 |||||||||||||| |||||||||||| Sbjct: 283 aggccagcttggttaaaggagaaagtt 309
>gb|AY332468.1| Oryza sativa (japonica cultivar-group) glutathione S-transferase (GST) mRNA, complete cds Length = 1092 Score = 46.1 bits (23), Expect = 0.26 Identities = 38/43 (88%) Strand = Plus / Plus Query: 592 ccattcttccttggccagttcagtttggtggacattgcatatg 634 ||||||||||||||||| || ||| |||| |||||||| |||| Sbjct: 528 ccattcttccttggccaatttagtctggttgacattgcgtatg 570
>gb|AY140069.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 955 Score = 46.1 bits (23), Expect = 0.26 Identities = 41/47 (87%) Strand = Plus / Plus Query: 292 aggccagcttggttcaaggagaaagtttacccggacaacaaggtgcc 338 ||||| ||||||| |||||||||||| || || || ||||||||||| Sbjct: 213 aggcctgcttggtacaaggagaaagtatatccagagaacaaggtgcc 259
>gb|AY085126.1| Arabidopsis thaliana clone 13224 mRNA, complete sequence Length = 987 Score = 46.1 bits (23), Expect = 0.26 Identities = 41/47 (87%) Strand = Plus / Plus Query: 292 aggccagcttggttcaaggagaaagtttacccggacaacaaggtgcc 338 ||||| ||||||| |||||||||||| || || || ||||||||||| Sbjct: 245 aggcctgcttggtacaaggagaaagtatatccagagaacaaggtgcc 291
>emb|AL162973.1|ATF9G14 Arabidopsis thaliana DNA chromosome 5, BAC clone F9G14 (ESSA project) Length = 104769 Score = 46.1 bits (23), Expect = 0.26 Identities = 41/47 (87%) Strand = Plus / Plus Query: 292 aggccagcttggttcaaggagaaagtttacccggacaacaaggtgcc 338 |||||||||||||| |||||||||||| | || | ||||||||||| Sbjct: 26844 aggccagcttggttaaaggagaaagttaatcctgcaaacaaggtgcc 26890
>emb|AL132970.2|ATT15C9 Arabidopsis thaliana DNA chromosome 3, BAC clone T15C9 Length = 84601 Score = 46.1 bits (23), Expect = 0.26 Identities = 41/47 (87%) Strand = Plus / Minus Query: 290 acaggccagcttggttcaaggagaaagtttacccggacaacaaggtg 336 ||||||| ||||||| ||||||||||||||| ||| ||||||||| Sbjct: 52569 acaggcctgcttggtataaggagaaagtttactcggctaacaaggtg 52523
>gb|BT002166.1| Arabidopsis thaliana unknown protein (not annotated) mRNA, complete cds Length = 763 Score = 46.1 bits (23), Expect = 0.26 Identities = 41/47 (87%) Strand = Plus / Plus Query: 292 aggccagcttggttcaaggagaaagtttacccggacaacaaggtgcc 338 ||||| ||||||| |||||||||||| || || || ||||||||||| Sbjct: 196 aggcctgcttggtacaaggagaaagtatatccagagaacaaggtgcc 242
>ref|XR_022960.1| PREDICTED: Pan troglodytes similar to cytoplasmic protein (LOC459180), mRNA Length = 6805 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 539 ctgctgctgctgtggataaaat 560 |||||||||||||||||||||| Sbjct: 5655 ctgctgctgctgtggataaaat 5676
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 539 ctgctgctgctgtggataaaatagaa 564 ||||||||||||||||| |||||||| Sbjct: 16996438 ctgctgctgctgtggattaaatagaa 16996413
>gb|BC081132.1| Xenopus laevis MGC83948 protein, mRNA (cDNA clone MGC:83948 IMAGE:6862146), complete cds Length = 2716 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 653 ttcagatattctattctggtat 674 |||||||||||||||||||||| Sbjct: 2222 ttcagatattctattctggtat 2243
>gb|AC012160.7| Drosophila melanogaster clone BACR06G02, complete sequence Length = 172069 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 539 ctgctgctgctgtggataaaatagaa 564 ||||||||||||||||| |||||||| Sbjct: 34342 ctgctgctgctgtggattaaatagaa 34317
>gb|AC010921.12| Drosophila melanogaster clone BACR15L12, complete sequence Length = 163466 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 539 ctgctgctgctgtggataaaatagaa 564 ||||||||||||||||| |||||||| Sbjct: 69364 ctgctgctgctgtggattaaatagaa 69389
>dbj|AK126362.1| Homo sapiens cDNA FLJ44398 fis, clone TSTOM2002265 Length = 2241 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 539 ctgctgctgctgtggataaaat 560 |||||||||||||||||||||| Sbjct: 836 ctgctgctgctgtggataaaat 815
>gb|AC006038.3| Homo sapiens BAC clone RP11-299C5 from 2, complete sequence Length = 184950 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 539 ctgctgctgctgtggataaaat 560 |||||||||||||||||||||| Sbjct: 79500 ctgctgctgctgtggataaaat 79521
>dbj|AK177507.1| Mus musculus cDNA, clone:Y0G0102P15, strand:unspecified Length = 196 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 592 ccattcttccttggccagttca 613 |||||||||||||||||||||| Sbjct: 164 ccattcttccttggccagttca 143
>ref|XM_508146.2| PREDICTED: Pan troglodytes protein tyrosine phosphatase, receptor type, E, transcript variant 5 (PTPRE), mRNA Length = 3685 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 tctcccattcttccctcccgt 41 ||||||||||||||||||||| Sbjct: 2885 tctcccattcttccctcccgt 2905
>ref|XM_001141858.1| PREDICTED: Pan troglodytes protein tyrosine phosphatase, receptor type, E, transcript variant 4 (PTPRE), mRNA Length = 4140 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 tctcccattcttccctcccgt 41 ||||||||||||||||||||| Sbjct: 3340 tctcccattcttccctcccgt 3360
>ref|XM_001141710.1| PREDICTED: Pan troglodytes protein tyrosine phosphatase, receptor type, E, transcript variant 2 (PTPRE), mRNA Length = 3834 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 tctcccattcttccctcccgt 41 ||||||||||||||||||||| Sbjct: 3034 tctcccattcttccctcccgt 3054
>ref|XM_001141782.1| PREDICTED: Pan troglodytes protein tyrosine phosphatase, receptor type, E, transcript variant 3 (PTPRE), mRNA Length = 4069 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 tctcccattcttccctcccgt 41 ||||||||||||||||||||| Sbjct: 3269 tctcccattcttccctcccgt 3289
>ref|XM_001141616.1| PREDICTED: Pan troglodytes protein tyrosine phosphatase, receptor type, E, transcript variant 1 (PTPRE), mRNA Length = 4048 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 tctcccattcttccctcccgt 41 ||||||||||||||||||||| Sbjct: 3248 tctcccattcttccctcccgt 3268
>gb|DQ489496.1| Camellia oleifera OleII mRNA, complete cds Length = 590 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 538 gctgctgctgctgtggataaa 558 ||||||||||||||||||||| Sbjct: 102 gctgctgctgctgtggataaa 82
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 81 cgccatggcagccgctgttgcgccg 105 ||||||||| ||||||||||||||| Sbjct: 145200 cgccatggccgccgctgttgcgccg 145224
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 81 cgccatggcagccgctgttgcgccg 105 ||||||||| ||||||||||||||| Sbjct: 87777 cgccatggccgccgctgttgcgccg 87801
>gb|AC121296.7| Mus musculus chromosome 14, clone RP23-286K8, complete sequence Length = 232049 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 cctccatctcccattcttccctccc 39 |||||||||||||||| |||||||| Sbjct: 122235 cctccatctcccattcctccctccc 122259
>ref|XM_542535.2| PREDICTED: Canis familiaris similar to transmembrane protein 16E (LOC485416), mRNA Length = 4116 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 529 tcagctgaagctgctgctgct 549 ||||||||||||||||||||| Sbjct: 1288 tcagctgaagctgctgctgct 1268
>ref|XM_744061.1| Aspergillus fumigatus Af293 neutral amino acid permease (Afu2g00180) partial mRNA Length = 1374 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 530 cagctgaagctgctgctgctg 550 ||||||||||||||||||||| Sbjct: 1355 cagctgaagctgctgctgctg 1335
>gb|AC104376.6| Homo sapiens chromosome 8, clone CTD-2242O8, complete sequence Length = 203348 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 tgaaaggagagagcttggatt 382 ||||||||||||||||||||| Sbjct: 74320 tgaaaggagagagcttggatt 74300
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 81 cgccatggcagccgctgttgcgccg 105 ||||||||| ||||||||||||||| Sbjct: 20831976 cgccatggccgccgctgttgcgccg 20832000
>emb|AL445064.1|TACID2 Thermoplasma acidophilum complete genome; segment 2/5 Length = 338100 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 522 agatgtatcagctgaagctgc 542 ||||||||||||||||||||| Sbjct: 276900 agatgtatcagctgaagctgc 276920
>emb|AL732631.4| Mouse DNA sequence from clone RP23-345P19 on chromosome 11 no genes, complete sequence Length = 191363 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 800 agtttggcattgcttgaagac 820 ||||||||||||||||||||| Sbjct: 169570 agtttggcattgcttgaagac 169590
>gb|AC023842.5|AC023842 Homo sapiens chromosome 8, clone RP11-374M4, complete sequence Length = 187351 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 362 tgaaaggagagagcttggatt 382 ||||||||||||||||||||| Sbjct: 9732 tgaaaggagagagcttggatt 9752
>gb|AC092969.7| Homo sapiens 3 BAC RP11-561L3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180773 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 529 tcagctgaagctgctgctgctgtgg 553 |||| |||||||||||||||||||| Sbjct: 115420 tcaggtgaagctgctgctgctgtgg 115396
>emb|AJ131636.1|ATH131636 Arabidopsis thaliana mRNA for D-type cyclin Length = 1179 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 533 ctgaagctgctgctgctgtgg 553 ||||||||||||||||||||| Sbjct: 797 ctgaagctgctgctgctgtgg 817 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 200,539,100 Number of extensions: 11603816 Number of successful extensions: 265389 Number of sequences better than 10.0: 60 Number of HSP's gapped: 265384 Number of HSP's successfully gapped: 97 Length of query: 1090 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1067 Effective length of database: 18,503,978,556 Effective search space: 19743745119252 Effective search space used: 19743745119252 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)