ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf171d21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK107696:Os07g0213600 42 4e-04
2AK107785:Os06g0507200 36 0.017
3Os06g0507100:Os06g0507100 35 0.039
4M23745: 33 0.11
5Os07g0222100:Os07g0222100 33 0.19
6X63990:Os05g0499100 33 0.19
7AB016505:Os12g0269200 32 0.25
8D43658: 32 0.43
9AK107870:Os07g0222000 31 0.56
10AK107674:Os07g0216600 30 0.95
11AY644643:Os07g0655800 30 1.2
12AK107633:Os07g0216700 30 1.2
13Os11g0535100:Os11g0535100 28 4.7
14Os02g0766900:Os02g0766900 28 6.2

>AK107696:Os07g0213600 |
          Length = 154
 Score = 41.6 bits (96), Expect = 4e-04
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = +1

Query: 169 LGSCKDYVMERCFTMKDFPVTWPTKWWKGGCEHEVREKCCQQLSQIAPHCRCDAIRGV 342
           L  C+ Y++ RC                GG    VR +CC QL ++A  CRCDA+R +
Sbjct: 61  LPGCRAYLLRRC---------------GGGDPPGVRARCCHQLREVAARCRCDALRAM 103



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>AK107785:Os06g0507200 |
          Length = 149

 Score = 36.2 bits (82), Expect = 0.017
 Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
 Frame = +1

Query: 142 QQCPQERPNLGSCKDYVMERCFTMKDFPVTWPTKWWKGGCEHEVREKCCQQLSQIAP--H 315
           QQ P  +P +  C ++V ++C  M   P     +     C+  +R++CCQQ+  +A   H
Sbjct: 30  QQQPFMQPIMNPCNEFVRQQCSPMS-LPWEQSRRLQLSSCQ-VMRQQCCQQMRLMAQQYH 87

Query: 316 CR--CDAIRGVXXXXXXXXXXXXXXAVFKQIQRAQILPSKCNM 438
           C+  C  ++ +                  Q Q A  LPS C +
Sbjct: 88  CQAICTMVQSIMQQVQFDAGFVGEPQAQAQAQVALNLPSMCGV 130



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>Os06g0507100:Os06g0507100 |
          Length = 140

 Score = 35.0 bits (79), Expect = 0.039
 Identities = 19/65 (29%), Positives = 34/65 (52%)
 Frame = +1

Query: 139 SQQCPQERPNLGSCKDYVMERCFTMKDFPVTWPTKWWKGGCEHEVREKCCQQLSQIAPHC 318
           SQQ P  +P + SC ++V  +C  +   P     +     C+  +R++CC+++  +A   
Sbjct: 20  SQQQPFMQPIMNSCNEFVRRQCSPVS-LPWEQSHRLKLSSCQ-VMRQQCCRRMRLMAQQY 77

Query: 319 RCDAI 333
           RC AI
Sbjct: 78  RCQAI 82



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>M23745: |
          Length = 149

 Score = 33.5 bits (75), Expect = 0.11
 Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
 Frame = +1

Query: 142 QQCPQERPNLGSCKDYVMERCFTMKDFPVTWPTKWWKGGCEHEVREKCCQQLSQIAPHCR 321
           +Q   ++  L  C ++V ++C T+   P      +    C+  ++++CCQQL  IA    
Sbjct: 29  RQYQLQQQMLSPCGEFVRQQCSTVAT-PFFQSPVFQLRNCQ-VMQQQCCQQLRMIAQQSH 86

Query: 322 CDAIRGVXXXXXXXXXXXXXXAVFKQIQ-RAQI-----LPSKCNM 438
           C AI  V                F Q Q +AQ      LPS C +
Sbjct: 87  CQAISSVQAIVQQLQLQQFSGVYFDQAQAQAQAMLGLNLPSICGI 131



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>Os07g0222100:Os07g0222100 |
          Length = 100

 Score = 32.7 bits (73), Expect = 0.19
 Identities = 9/21 (42%), Positives = 17/21 (80%)
 Frame = +1

Query: 274 REKCCQQLSQIAPHCRCDAIR 336
           + +CC++L+ + P CRC+A+R
Sbjct: 3   KARCCRELAAVQPRCRCEALR 23



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>X63990:Os05g0499100 |
          Length = 186

 Score = 32.7 bits (73), Expect = 0.19
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 271 VREKCCQQLSQIAPHCRCDAIR 336
           +R +CCQQL  ++  CRC AIR
Sbjct: 74  LRMQCCQQLQDVSRECRCAAIR 95



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>AB016505:Os12g0269200 |
          Length = 156

 Score = 32.3 bits (72), Expect = 0.25
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = +1

Query: 169 LGSCKDYVMERCFTMKDFPVTWPTKWWKGGCEHEVREKCCQQLSQIAPHCRCDAIRGV 342
           L  C ++V ++C T+   P      +    C+  ++++CCQQL  IA    C AI  V
Sbjct: 44  LSPCGEFVRQQCSTVAT-PFFQSPVFQLRNCQ-VMQQQCCQQLRMIAQQSHCQAISSV 99



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>D43658: |
          Length = 109

 Score = 31.6 bits (70), Expect = 0.43
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 11/75 (14%)
 Frame = +1

Query: 253 GGCEHEVREKCCQQLSQIAPH-CRCDAIR----GVXXXXXXXXXXXXXXAVFKQIQRAQI 417
           GG + ++R+ CC+QL+ +    CRC A+     G+               VF   +R  +
Sbjct: 14  GGADEQLRQDCCRQLAAVDDSWCRCSALNHMVGGIYRELGATDVGHPMAEVFPGCRRGDL 73

Query: 418 ------LPSKCNMGV 444
                 LP+ CN+ +
Sbjct: 74  ERARATLPAFCNVDI 88



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>AK107870:Os07g0222000 |
          Length = 148

 Score = 31.2 bits (69), Expect = 0.56
 Identities = 9/21 (42%), Positives = 17/21 (80%)
 Frame = +1

Query: 271 VREKCCQQLSQIAPHCRCDAI 333
           ++E+CCQ+L+ +  +CRC A+
Sbjct: 69  LKERCCQELAAVPAYCRCAAL 89



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>AK107674:Os07g0216600 |
          Length = 158

 Score = 30.4 bits (67), Expect = 0.95
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 4/29 (13%)
 Frame = +1

Query: 268 EVREKCCQQLSQIAPHCRCDA----IRGV 342
           E  E CC++L+ +   CRCDA    +RGV
Sbjct: 73  EFLEPCCRELAAVPMQCRCDALSVLVRGV 101



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>AY644643:Os07g0655800 |
          Length = 299

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 262 EHEVREKCCQQLSQIAPHCRCDAI 333
           +H     CC+ L ++ P C CDA+
Sbjct: 245 DHRANRDCCRWLKEVEPACVCDAL 268



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>AK107633:Os07g0216700 |
          Length = 159

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 4/29 (13%)
 Frame = +1

Query: 268 EVREKCCQQLSQIAPHCRCDA----IRGV 342
           ++ E CC++L+ +   CRCDA    +RGV
Sbjct: 75  QLLEPCCRELAAVPMQCRCDALSVLVRGV 103



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>Os11g0535100:Os11g0535100 |
          Length = 135

 Score = 28.1 bits (61), Expect = 4.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 271 VREKCCQQLSQIAPHCRCD 327
           ++++CC QL  + P C CD
Sbjct: 68  LQQQCCMQLQGMMPQCNCD 86



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>Os02g0766900:Os02g0766900 |
          Length = 398

 Score = 27.7 bits (60), Expect = 6.2
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 565 FIHRWLHEHIYLSHVVVCDSLLVTNRGYIITSNSH 461
           F+ +W+ +HI  S  V+   LLVT  G+   SN +
Sbjct: 291 FMRKWMADHIRDSAAVLRKPLLVTEFGWSARSNGY 325


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 18,139,092
Number of extensions: 427312
Number of successful extensions: 1007
Number of sequences better than 10.0: 14
Number of HSP's gapped: 1006
Number of HSP's successfully gapped: 14
Length of query: 202
Length of database: 15,399,855
Length adjustment: 96
Effective length of query: 106
Effective length of database: 11,555,919
Effective search space: 1224927414
Effective search space used: 1224927414
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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