ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf171d21 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os07g11310:12007.t01005:unspliced-genomic alpha-amylase inhibitor 5, putative, expressed| Length = 690 Score = 43.7 bits (89), Expect = 0.001 Identities = 15/30 (50%), Positives = 20/30 (66%) Frame = +1 / +1 Query: 253 GGCEHEVREKCCQQLSQIAPHCRCDAIRGV 342 GG VR +CC QL ++A CRCDA+R + Sbjct: 262 GGDPPGVRARCCHQLREVAARCRCDALRAM 351 Score = 37.3 bits (75), Expect = 0.098 Identities = 17/30 (56%), Positives = 18/30 (60%) Frame = -3 / -2 Query: 335 RIASQRQCGAIWLSCWQHFSRTSCSQPPFH 246 R ASQRQ A LS WQH +RT PP H Sbjct: 344 RSASQRQRAATSLSWWQHRARTPGGSPPPH 255
>LOC_Os05g47840:12005.t04219:unspliced-genomic ATIPT1, putative, expressed| Length = 1808 Score = 38.6 bits (78), Expect = 0.038 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -1 / +1 Query: 295 AAGNTSPEPHAHSLPSTTSWAR*LENPSS*NTAPSRNP 182 ++G+TSP S P T WAR +PSS T+P P Sbjct: 922 SSGSTSPRQPPRSAPRTPGWARPSASPSSATTSPGARP 1035
>LOC_Os12g17030:12012.t01555:unspliced-genomic prolamin PPROL 17 precursor, putative| Length = 440 Score = 28.1 bits (55), Expect(2) = 0.078 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = -3 / -1 Query: 332 IASQRQCGAIWLSCWQH 282 +A Q C AI LSCWQH Sbjct: 287 MAWQ*DCCAIILSCWQH 237 Score = 28.1 bits (55), Expect(2) = 0.078 Identities = 13/20 (65%), Positives = 13/20 (65%) Frame = -2 / -3 Query: 93 LRGGCACYKSKES*EE*GLH 34 LR G AC SKES EE LH Sbjct: 60 LRRGAACSNSKESKEENDLH 1
>LOC_Os12g16880:12012.t01541:unspliced-genomic prolamin PPROL 17 precursor, putative, expressed| Length = 696 Score = 28.1 bits (55), Expect(2) = 0.17 Identities = 13/20 (65%), Positives = 13/20 (65%) Frame = -2 / -1 Query: 93 LRGGCACYKSKES*EE*GLH 34 LR G AC SKES EE LH Sbjct: 117 LRRGAACSNSKESKEENDLH 58 Score = 27.6 bits (54), Expect(2) = 0.17 Identities = 11/16 (68%), Positives = 11/16 (68%) Frame = -3 / -2 Query: 329 ASQRQCGAIWLSCWQH 282 A Q C AI LSCWQH Sbjct: 341 AWQ*DCCAIILSCWQH 294 Score = 30.9 bits (61), Expect = 8.4 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +1 / +1 Query: 271 VREKCCQQLSQIAPHCRCDAIRGV 342 ++++CCQQL IA C A+ V Sbjct: 283 MQQQCCQQLRMIAQQSHCQAVSSV 354
>LOC_Os07g12090:12007.t01081:unspliced-genomic alpha-amylase/trypsin inhibitor precursor, putative| Length = 303 Score = 36.3 bits (73), Expect = 0.19 Identities = 9/21 (42%), Positives = 17/21 (80%) Frame = +1 / +1 Query: 274 REKCCQQLSQIAPHCRCDAIR 336 + +CC++L+ + P CRC+A+R Sbjct: 7 KARCCRELAAVQPRCRCEALR 69
>LOC_Os05g41970:12005.t03734:unspliced-genomic globulin precursor, putative, expressed| Length = 828 Score = 36.3 bits (73), Expect = 0.19 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +1 / +2 Query: 271 VREKCCQQLSQIAPHCRCDAIR 336 +R +CCQQL ++ CRC AIR Sbjct: 296 LRMQCCQQLQDVSRECRCAAIR 361
>LOC_Os06g31060:12006.t02808:unspliced-genomic prolamin PPROL 17 precursor, putative, expressed| Length = 1884 Score = 26.7 bits (52), Expect(2) = 0.30 Identities = 8/21 (38%), Positives = 15/21 (71%) Frame = +1 / +2 Query: 271 VREKCCQQLSQIAPHCRCDAI 333 +R++CC+++ +A RC AI Sbjct: 1517 MRQQCCRRMRLMAQQYRCQAI 1579 Score = 26.3 bits (51), Expect(2) = 0.30 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = +1 / +2 Query: 139 SQQCPQERPNLGSCKDYVMERC 204 SQQ P +P + SC ++V +C Sbjct: 1391 SQQQPFMQPIMNSCNEFVRRQC 1456
>LOC_Os01g55520:12001.t04963:unspliced-genomic pollen-specific kinase partner protein, putative, expressed| Length = 2739 Score = 35.0 bits (70), Expect = 0.48 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +1 / -1 Query: 163 PNLGSCKDYVMERCFTMKDFPVTWPTKWWKGGC 261 P++G ++ C + FPV+W + W GGC Sbjct: 2052 PDIGRTAHTGVKSCVILPCFPVSWRCRGWTGGC 1954
>LOC_Os07g12080:12007.t01080:unspliced-genomic trypsin/factor XIIA inhibitor precursor, putative, expressed| Length = 669 Score = 34.5 bits (69), Expect = 0.66 Identities = 9/21 (42%), Positives = 17/21 (80%) Frame = +1 / +2 Query: 271 VREKCCQQLSQIAPHCRCDAI 333 ++E+CCQ+L+ + +CRC A+ Sbjct: 257 LKERCCQELAAVPAYCRCAAL 319
>LOC_Os04g21820:12004.t01913:unspliced-genomic OsWAK33 - OsWAK receptor-like protein (OsWAK-RLP), expressed| Length = 5218 Score = 28.1 bits (55), Expect(2) = 0.93 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = +3 / +3 Query: 537 MCSCNHL*IKFRLYIGLCW 593 MC C + RLY+ LCW Sbjct: 2232 MCQCKQHMFRCRLYLCLCW 2288 Score = 23.1 bits (44), Expect(2) = 0.93 Identities = 7/16 (43%), Positives = 9/16 (56%) Frame = +3 / +3 Query: 384 CCIQTNSEGPDPPLKV 431 CC S GP+ PL + Sbjct: 2181 CC*SNMSRGPEEPLSI 2228
>LOC_Os04g51260:12004.t04603:unspliced-genomic conserved hypothetical protein| Length = 2508 Score = 25.8 bits (50), Expect(2) = 0.98 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = -1 / +1 Query: 295 AAGNTSPEPHAHSLPSTTSWAR*LENPSS*NTAPSR 188 ++ + PEP + + ST+SW +N SS P R Sbjct: 1504 SSSSCPPEPTSSTSGSTSSWVPPRDNASSWAPPPPR 1611 Score = 25.4 bits (49), Expect(2) = 0.98 Identities = 10/32 (31%), Positives = 16/32 (50%) Frame = -1 / +2 Query: 118 HCNHHQLSIARRLCXXXXXXXXXGIRSSCFQC 23 HC+ H+ ++ RR C RS+ F+C Sbjct: 1634 HCHRHRGAMRRRGCHRHRNRGALRRRSTGFKC 1729
>LOC_Os12g28430:12012.t02553:unspliced-genomic transposon protein, putative, unclassified| Length = 1937 Score = 33.1 bits (66), Expect = 1.7 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = -3 / -2 Query: 302 WLSCWQHFSRTSCSQPPFHHFVGQV 228 WL C+ HF+ SCS P +G + Sbjct: 1258 WLHCFLHFASESCSLPELRQTIGDI 1184
>LOC_Os06g26330:12006.t02438:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 639 Score = 33.1 bits (66), Expect = 1.7 Identities = 10/18 (55%), Positives = 14/18 (77%) Frame = -3 / +1 Query: 302 WLSCWQHFSRTSCSQPPF 249 ++SCWQ FS+ C +PPF Sbjct: 334 FISCWQGFSQKLCVRPPF 387
>LOC_Os07g46210:12007.t04257:unspliced-genomic aspartic acid-rich protein, putative, expressed| Length = 1367 Score = 33.1 bits (66), Expect = 1.7 Identities = 9/24 (37%), Positives = 14/24 (58%) Frame = +1 / +3 Query: 262 EHEVREKCCQQLSQIAPHCRCDAI 333 +H CC+ L ++ P C CDA+ Sbjct: 786 DHRANRDCCRWLKEVEPACVCDAL 857
>LOC_Os07g11630:12007.t01036:unspliced-genomic alpha-amylase/trypsin inhibitor precursor, putative, expressed| Length = 701 Score = 33.1 bits (66), Expect = 1.7 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = +1 / +2 Query: 268 EVREKCCQQLSQIAPHCRCDAI 333 E E CC++L+ + CRCDA+ Sbjct: 260 EFLEPCCRELAAVPMQCRCDAL 325
>LOC_Os04g22830:12004.t02010:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 2736 Score = 33.1 bits (66), Expect = 1.7 Identities = 10/28 (35%), Positives = 17/28 (60%) Frame = +1 / -1 Query: 232 WPTKWWKGGCEHEVREKCCQQLSQIAPH 315 +P +W GG E +R++CC ++ PH Sbjct: 408 FPKWFWLGGVEDVLRDQCCLEIFPTIPH 325
>LOC_Os12g02910:12012.t00184:unspliced-genomic transferase, transferring glycosyl groups, putative, expressed| Length = 5446 Score = 25.4 bits (49), Expect(2) = 2.3 Identities = 8/18 (44%), Positives = 10/18 (55%) Frame = +1 / -2 Query: 271 VREKCCQQLSQIAPHCRC 324 V +KCC Q Q C+C Sbjct: 1278 VHQKCCSQQQQSKSICQC 1225 Score = 24.4 bits (47), Expect(2) = 2.3 Identities = 8/21 (38%), Positives = 12/21 (57%) Frame = +1 / -2 Query: 142 QQCPQERPNLGSCKDYVMERC 204 QQC ++ N+ + MERC Sbjct: 1344 QQCKAQKKNIKEIRPVKMERC 1282
>LOC_Os12g17630:12012.t01615:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2689 Score = 32.7 bits (65), Expect = 2.3 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = -3 / -3 Query: 302 WLSCWQHFSRTSCSQPPFHHFVGQV 228 WL C+ HF+ SCS P +G + Sbjct: 1181 WLHCFLHFASGSCSLPELRQTIGDI 1107
>LOC_Os09g17250:12009.t01512:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2892 Score = 32.7 bits (65), Expect = 2.3 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = -3 / -3 Query: 302 WLSCWQHFSRTSCSQPPFHHFVGQV 228 WL C+ HF+ SCS P +G + Sbjct: 1258 WLHCFLHFASGSCSLPELRQTIGDI 1184
>LOC_Os09g13140:12009.t01104:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2713 Score = 32.7 bits (65), Expect = 2.3 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = -3 / -3 Query: 302 WLSCWQHFSRTSCSQPPFHHFVGQV 228 WL C+ HF+ SCS P +G + Sbjct: 1178 WLHCFLHFASGSCSLPELRQTIGDI 1104
>LOC_Os08g11280:12008.t01010:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2810 Score = 32.7 bits (65), Expect = 2.3 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = -3 / -2 Query: 302 WLSCWQHFSRTSCSQPPFHHFVGQV 228 WL C+ HF+ SCS P +G + Sbjct: 1177 WLHCFLHFASGSCSLPELRQTIGDI 1103
>LOC_Os04g53900:12004.t04863:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2714 Score = 32.7 bits (65), Expect = 2.3 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = -3 / -1 Query: 302 WLSCWQHFSRTSCSQPPFHHFVGQV 228 WL C+ HF+ SCS P +G + Sbjct: 1178 WLHCFLHFASGSCSLPELRRTIGDI 1104
>LOC_Os04g05240:12004.t00406:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2718 Score = 32.7 bits (65), Expect = 2.3 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = -3 / -2 Query: 302 WLSCWQHFSRTSCSQPPFHHFVGQV 228 WL C+ HF+ SCS P +G + Sbjct: 1178 WLHCFLHFASGSCSLPELRQTIGDI 1104
>LOC_Os01g52390:12001.t04666:unspliced-genomic plasminogen activator inhibitor 1 RNA-binding protein, putative,| expressed Length = 3375 Score = 32.7 bits (65), Expect = 2.3 Identities = 11/25 (44%), Positives = 12/25 (48%) Frame = +3 / +2 Query: 345 PRQARWYLWHWGRCCIQTNSEGPDP 419 P RW LW WG CC +G P Sbjct: 932 PGWLRWRLWRWGCCCWWRR*QGERP 1006
>LOC_Os07g11650:12007.t01038:unspliced-genomic alpha-amylase/trypsin inhibitor precursor, putative, expressed| Length = 793 Score = 32.7 bits (65), Expect = 2.4 Identities = 9/22 (40%), Positives = 16/22 (72%) Frame = +1 / +1 Query: 268 EVREKCCQQLSQIAPHCRCDAI 333 ++ E CC++L+ + CRCDA+ Sbjct: 340 QLLEPCCRELAAVPMQCRCDAL 405
>LOC_Os03g53920:12003.t04706:unspliced-genomic kinesin, motor region, putative, expressed| Length = 8618 Score = 27.6 bits (54), Expect(2) = 2.8 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = -1 / -1 Query: 427 LRGGSGPSEFV*IQHLPQCQRYHRAC 350 L GSG + + IQ + RYHR C Sbjct: 7724 LPAGSGSNFLLLIQEMQSYNRYHRVC 7647 Score = 27.2 bits (53), Expect(2) = 2.8 Identities = 10/29 (34%), Positives = 16/29 (55%) Frame = -3 / -2 Query: 347 WITPRIASQRQCGAIWLSCWQHFSRTSCS 261 ++T + + C +WL WQH R+S S Sbjct: 6691 YLTG*VVCWQNCCTLWLVIWQHPIRSSPS 6605
>LOC_Os02g17960:12002.t01590:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 7738 Score = 32.2 bits (64), Expect = 3.2 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = -1 / -2 Query: 595 FQHRPIYKRNFIHRWLHEHIYLSHVVVCDSLLVTNRGYIITSN 467 FQH+ YK + W H IY + VV+CD + G+++ ++ Sbjct: 7368 FQHQNNYKV**VITWKHTSIYEN*VVLCDIHIYVLTGHLLRTD 7240
>LOC_Os03g55740:12003.t04835:unspliced-genomic prolamin, putative, expressed| Length = 812 Score = 29.5 bits (58), Expect(2) = 3.7 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = +1 / +2 Query: 271 VREKCCQQLSQIAPHCRCDA 330 ++++CC QL + P C C A Sbjct: 272 LQQQCCMQLQGMIPQCHCGA 331 Score = 21.7 bits (41), Expect(2) = 3.7 Identities = 8/24 (33%), Positives = 11/24 (45%) Frame = +3 / +1 Query: 375 WGRCCIQTNSEGPDPPLKVQHGRR 446 W R + +G + VQHG R Sbjct: 373 WTRATTNDDEDGDATAICVQHGTR 444
>LOC_Os03g58764:12003.t05129:unspliced-genomic F-box domain containing protein, expressed| Length = 5979 Score = 28.6 bits (56), Expect(2) = 3.7 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = +3 / -3 Query: 339 SDPRQARWYLWHWGRCCIQTNSEGPDPPLK 428 S R WYL + CI TN + PPLK Sbjct: 4882 STHRSGSWYLRYHTG*CILTNYQYETPPLK 4793 Score = 25.4 bits (49), Expect(2) = 3.7 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = +1 / -1 Query: 502 INCHIPQHVTNKCAHVT 552 +NC PQH NK A +T Sbjct: 3732 LNCICPQHQNNKLA*IT 3682
>LOC_Os08g07230:12008.t00612:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2942 Score = 25.4 bits (49), Expect(2) = 4.3 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +2 / -3 Query: 419 SPQSATWASTVGSLVAIT 472 +P SA W + VGSL+ T Sbjct: 1533 TPASANWFAVVGSLLGFT 1480 Score = 23.5 bits (45), Expect(2) = 4.3 Identities = 7/18 (38%), Positives = 10/18 (55%) Frame = +1 / -1 Query: 244 WWKGGCEHEVREKCCQQL 297 W+ C+H RE C +L Sbjct: 1658 WFLSHCQHPFREDCLFEL 1605
>LOC_Os01g37230:12001.t03268:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2926 Score = 25.4 bits (49), Expect(2) = 4.3 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +2 / -3 Query: 419 SPQSATWASTVGSLVAIT 472 +P SA W + VGSL+ T Sbjct: 1517 TPASADWLAVVGSLLGFT 1464 Score = 23.5 bits (45), Expect(2) = 4.3 Identities = 7/18 (38%), Positives = 10/18 (55%) Frame = +1 / -1 Query: 244 WWKGGCEHEVREKCCQQL 297 W+ C+H RE C +L Sbjct: 1642 WFLSHCQHPFREDCLFEL 1589
>LOC_Os10g34050:12010.t02707:unspliced-genomic hypothetical protein| Length = 2399 Score = 31.8 bits (63), Expect = 4.4 Identities = 12/38 (31%), Positives = 20/38 (52%) Frame = +3 / -3 Query: 282 VLPAAEPDSTTLSLRCYPGSDPRQARWYLWHWGRCCIQ 395 +L +A P S++ PG+ P RW+ W RC ++ Sbjct: 1833 ILSSACPSSSSSRAAPSPGATPGWPRWWSSGWNRCLME 1720
>LOC_Os05g51950:12005.t04620:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2888 Score = 31.8 bits (63), Expect = 4.4 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = -3 / -1 Query: 302 WLSCWQHFSRTSCSQPPFHHFVGQV 228 WL C+ HF+ SC P +G + Sbjct: 1259 WLHCFLHFASRSCRLPELRQIIGDI 1185
>LOC_Os03g18520:12003.t01623:unspliced-genomic glucan endo-1,3-beta-glucosidase 5 precursor, putative, expressed| Length = 2850 Score = 31.8 bits (63), Expect = 4.4 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = +3 / +2 Query: 345 PRQARWYLWHWGRCCIQTNSEGPDPPLKVQHGRR 446 PR+AR L H GR + P PP +Q GRR Sbjct: 227 PRRARGALGHRGRGHRRGPQRAPPPPRHLQEGRR 328
>LOC_Os08g18974:12008.t04351:unspliced-genomic expressed protein| Length = 1891 Score = 31.8 bits (63), Expect = 4.5 Identities = 10/26 (38%), Positives = 18/26 (69%) Frame = -1 / -2 Query: 565 FIHRWLHEHIYLSHVVVCDSLLVTNR 488 FIH++++ H Y +++ C SL TN+ Sbjct: 354 FIHKYIYTHTYTFYMIYCYSLF*TNQ 277
>LOC_Os03g57000:12003.t04969:unspliced-genomic DNA topoisomerase IV subunit A, putative| Length = 2022 Score = 31.8 bits (63), Expect = 4.5 Identities = 14/23 (60%), Positives = 16/23 (69%) Frame = +2 / +2 Query: 404 RGPRSSPQSATWASTVGSLVAIT 472 R PRSSP +AT AST +L A T Sbjct: 1160 RSPRSSPVAATMASTTKALTATT 1228
>LOC_Os03g12570:12003.t01056:unspliced-genomic DNA cytosine methyltransferase MET2a, putative, expressed| Length = 11118 Score = 31.8 bits (63), Expect = 4.5 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = -2 / -3 Query: 543 STFICHMLWYVTVYWSQIGAISSPVIATREPTVDAHV 433 +T ICH+L Y+ V S+I + S ++ T+D ++ Sbjct: 5842 TTLICHILLYL*VIQSKIWTLKSILLIPESTTIDTNI 5732
>LOC_Os08g19780:12008.t01796:unspliced-genomic hypothetical protein| Length = 630 Score = 25.4 bits (49), Expect(2) = 4.8 Identities = 7/9 (77%), Positives = 8/9 (88%) Frame = -2 / -2 Query: 249 PPLRGPGNW 223 PP RGPG+W Sbjct: 302 PPYRGPGSW 276 Score = 23.5 bits (45), Expect(2) = 4.8 Identities = 7/14 (50%), Positives = 9/14 (64%) Frame = -3 / -3 Query: 299 LSCWQHFSRTSCSQ 258 L+CW RT CS+ Sbjct: 385 LNCWSQCRRTMCSR 344
>LOC_Os08g37830:12008.t03519:unspliced-genomic hypothetical protein| Length = 423 Score = 24.9 bits (48), Expect(2) = 5.0 Identities = 8/13 (61%), Positives = 9/13 (69%) Frame = +3 / -3 Query: 33 HEDLIPPSSPCSC 71 H + PPSSPC C Sbjct: 172 HRVVRPPSSPCFC 134 Score = 24.9 bits (48), Expect(2) = 5.0 Identities = 7/16 (43%), Positives = 9/16 (56%) Frame = +1 / -3 Query: 202 CFTMKDFPVTWPTKWW 249 CF + WPT+WW Sbjct: 136 CFLVCACFPRWPTRWW 89
>LOC_Os01g41290:12001.t03649:unspliced-genomic ribosomal RNA apurinic site specific lyase, putative, expressed| Length = 2227 Score = 26.3 bits (51), Expect(2) = 5.1 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = +3 / -3 Query: 378 GRCCIQTNSEGPDPPLKVQHGR 443 GR C + S GP PP + GR Sbjct: 848 GRGCWRGRSRGPGPPWRRSRGR 783 Score = 25.8 bits (50), Expect(2) = 5.1 Identities = 9/27 (33%), Positives = 12/27 (44%) Frame = +1 / -3 Query: 232 WPTKWWKGGCEHEVREKCCQQLSQIAP 312 W T + C+H +R CQ L P Sbjct: 1679 WKTTYLMHDCKHSMRPASCQNLRLSLP 1599
>LOC_Os11g40410:12011.t03582:unspliced-genomic expressed protein| Length = 4812 Score = 31.3 bits (62), Expect = 6.1 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = -3 / +1 Query: 305 IWLSCWQHFSRTSCSQ 258 +W SC H SRTSCSQ Sbjct: 2542 LWGSCKPHLSRTSCSQ 2589
>LOC_Os03g22200:12003.t01972:unspliced-genomic cytochrome c oxidoreductase, putative, expressed| Length = 2215 Score = 31.3 bits (62), Expect = 6.1 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = +3 / +3 Query: 327 CYPGSDPRQARWYLWHWGRC 386 C+P + R RW+ W W RC Sbjct: 633 CWP*TWARWRRWWRWRWWRC 692
>LOC_Os01g71970:12001.t06488:unspliced-genomic GRAS family transcription factor containing protein, expressed| Length = 1931 Score = 31.3 bits (62), Expect = 6.1 Identities = 14/45 (31%), Positives = 16/45 (35%) Frame = +3 / +1 Query: 285 LPAAEPDSTTLSLRCYPGSDPRQARWYLWHWGRCCIQTNSEGPDP 419 LP A ST+ P P W W R C + S P P Sbjct: 979 LPRAATSSTSARSSASPAPPPTSRYWRPWSPRRSCTSSTSAAPTP 1113
>LOC_Os01g40499:12001.t03573:unspliced-genomic serine/threonine-protein kinase receptor precursor, putative,| expressed Length = 16038 Score = 31.3 bits (62), Expect = 6.1 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -3 / +1 Query: 263 SQPPFHHFVGQVTGKSFIVKHRSIT 189 S PP HHF+ VT S + + RS T Sbjct: 9340 SSPPDHHFISSVTP*SIVSRSRSAT 9414
>LOC_Os12g17010:12012.t01553:unspliced-genomic prolamin PPROL 17 precursor, putative, expressed| Length = 1079 Score = 31.3 bits (62), Expect = 6.1 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = +1 / +3 Query: 271 VREKCCQQLSQIAPHCRCDAIRGV 342 ++++CCQQL IA C AI V Sbjct: 606 MQQQCCQQLRMIAQQSHCQAISSV 677
>LOC_Os12g16890:12012.t01542:unspliced-genomic prolamin PPROL 17 precursor, putative, expressed| Length = 730 Score = 31.3 bits (62), Expect = 6.1 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = +1 / +1 Query: 271 VREKCCQQLSQIAPHCRCDAIRGV 342 ++++CCQQL IA C AI V Sbjct: 286 MQQQCCQQLRMIAQQSHCQAISSV 357
>LOC_Os10g08240:12010.t00648:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 2781 Score = 31.3 bits (62), Expect = 6.1 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = -1 / +2 Query: 565 FIHRWLHEHIYLSHVVVCDSLLVTNRGYIITSNSH 461 F+ +W+ +HI+ S V+ LLVT G+ SN + Sbjct: 170 FMRKWMADHIHDSAAVLWKPLLVTVFGWSARSNGY 274
>LOC_Os09g38940:12009.t03361:unspliced-genomic hypothetical protein| Length = 1877 Score = 31.3 bits (62), Expect = 6.1 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = -1 / -2 Query: 595 FQHRPIYKRNFIHRWLHEHIYLSHVVVCDSLLVTNRGYIITSN 467 FQH+ YK + W H IY + VV+C + G+++ +N Sbjct: 1510 FQHQNNYKV**VITWKHTSIYEN*VVLCGIHIYVFTGHLLRTN 1382
>LOC_Os09g32180:12009.t02834:unspliced-genomic conserved hypothetical protein| Length = 8139 Score = 31.3 bits (62), Expect = 6.1 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = -1 / -2 Query: 328 HRSDNVVLSGSAAGNTSPEPHAHSLPSTTSWAR*LENPSS 209 +RS G+A GNT+ + H LPS+ + L NPS+ Sbjct: 3728 NRSTEKTEEGTAQGNTTIQGPTHPLPSSPRDSATLSNPST 3609
>LOC_Os09g32080:12009.t02825:unspliced-genomic endochitinase A2 precursor, putative, expressed| Length = 1993 Score = 31.3 bits (62), Expect = 6.1 Identities = 21/66 (31%), Positives = 28/66 (42%) Frame = -1 / +2 Query: 379 PQCQRYHRACLGSLPG*HRSDNVVLSGSAAGNTSPEPHAHSLPSTTSWAR*LENPSS*NT 200 P+ R A GS P * S + A T + ++TSWA P++ T Sbjct: 1223 PRTTRSPSASPGSAPP*TCSTATRSAARATSTT*TSSSRTTSTTSTSWASAASTPATTAT 1402 Query: 199 APSRNP 182 APSR P Sbjct: 1403 APSRPP 1420
>LOC_Os08g34950:12008.t03235:unspliced-genomic 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding| protein, putative, expressed Length = 10755 Score = 31.3 bits (62), Expect = 6.1 Identities = 12/16 (75%), Positives = 12/16 (75%) Frame = -1 / +1 Query: 607 FFFFFQHRPIYKRNFI 560 FFFFFQ R IY NFI Sbjct: 9781 FFFFFQERGIYNVNFI 9828
>LOC_Os07g02200:12007.t00112:unspliced-genomic blue copper protein precursor, putative, expressed| Length = 983 Score = 31.3 bits (62), Expect = 6.1 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = -1 / +2 Query: 592 QHRPIYKRNFIHRWLHEHIYLSHVVVCDSLLVTNRGYIITS 470 +HRP YK +++ + LH I L + + S L+T R + +S Sbjct: 245 KHRPFYKGDWLRKHLHRFISLFLICLDRSPLMTQRNGVGSS 367
>LOC_Os04g44590:12004.t03999:unspliced-genomic expressed protein| Length = 4269 Score = 31.3 bits (62), Expect = 6.1 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = -1 / -1 Query: 139 NHLLHQRHCNHHQLS 95 N LLH+RH NHH +S Sbjct: 726 NWLLHKRHANHHSIS 682
>LOC_Os09g20850:12009.t01819:unspliced-genomic expressed protein| Length = 1338 Score = 30.9 bits (61), Expect = 8.4 Identities = 11/32 (34%), Positives = 14/32 (43%) Frame = +3 / -3 Query: 288 PAAEPDSTTLSLRCYPGSDPRQARWYLWHWGR 383 P P S T + P P+ A W+ W W R Sbjct: 223 PTPPPSSRTAAPPSSPPPPPQPAAWWRWRWWR 128
>LOC_Os05g48890:12005.t04323:unspliced-genomic fasciclin-like arabinogalactan protein 7 precursor, putative,| expressed Length = 1009 Score = 30.9 bits (61), Expect = 8.4 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = +3 / -2 Query: 327 CYPGSDPRQARWYLWHWGRCCIQTNSEGPDP 419 C PG P + R + WGRC + GP P Sbjct: 450 CAPGCSPCRRRPWSRTWGRCAPAPATPGPAP 358
>LOC_Os11g33000:12011.t02896:unspliced-genomic prolamin, putative, expressed| Length = 636 Score = 30.9 bits (61), Expect = 8.4 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = +1 / +2 Query: 271 VREKCCQQLSQIAPHCRCD 327 ++++CC QL + P C CD Sbjct: 299 LQQQCCMQLQGMMPQCNCD 355
>LOC_Os07g29310:12007.t02621:unspliced-genomic OsSAUR30 - Auxin-responsive SAUR gene family member, expressed| Length = 968 Score = 30.9 bits (61), Expect = 8.4 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = -1 / +2 Query: 301 GSAAGNTSPEPHAHSLPSTTSWAR*LENPSS*NTAPS 191 G+AAG++SP P + + PS +S AR + + APS Sbjct: 239 GTAAGSSSPSPASPATPSGSSSARRRRSSAPPAAAPS 349
>LOC_Os06g04800:12006.t00369:unspliced-genomic proteasome subunit beta type 6 precursor, putative, expressed| Length = 3470 Score = 30.9 bits (61), Expect = 8.4 Identities = 12/43 (27%), Positives = 19/43 (44%) Frame = +1 / +3 Query: 184 DYVMERCFTMKDFPVTWPTKWWKGGCEHEVREKCCQQLSQIAP 312 D +E C + P+ +P WW V +KC +I+P Sbjct: 3015 DLSLETCPVLFVLPIMFPKDWWITYAYDHVADKCRWCFEEISP 3143
>LOC_Os03g28380:12003.t02507:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2373 Score = 30.9 bits (61), Expect = 8.4 Identities = 12/29 (41%), Positives = 13/29 (44%) Frame = -2 / +2 Query: 237 GPGNWKILHRETPLHHVILART*VWPLLW 151 GP + R PL I R WPLLW Sbjct: 2027 GPSRLVVRFRTAPLRTAIAVRVYQWPLLW 2113
>LOC_Os02g44230:12002.t04015:unspliced-genomic expressed protein| Length = 4031 Score = 30.9 bits (61), Expect = 8.4 Identities = 7/16 (43%), Positives = 11/16 (68%) Frame = +1 / +1 Query: 277 EKCCQQLSQIAPHCRC 324 E CC++ ++ PHC C Sbjct: 2254 ESCCEKCCEVLPHCNC 2301
>LOC_Os02g02400:12002.t00139:unspliced-genomic catalase isozyme A, putative, expressed| Length = 2795 Score = 30.9 bits (61), Expect = 8.4 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = -1 / +3 Query: 604 FFFFQHRPIYKRNFIHRWLHEHI 536 FFF HR IY+ H+W + H+ Sbjct: 2616 FFFPNHRSIYEPYLRHQWFNYHV 2684
>LOC_Os01g58620:12001.t05257:unspliced-genomic expressed protein| Length = 1630 Score = 30.9 bits (61), Expect = 8.4 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = -1 / +2 Query: 304 SGSAAGNTSPEPHAHSLPSTTSWAR*LENPSS*NTAPSRNP 182 SGS++ TS + S PS +S +PS +T PSR+P Sbjct: 623 SGSSSSRTSSSTSSSSSPSPSSPPPPPSSPSPRSTPPSRHP 745
>LOC_Os05g51750:12005.t04600:unspliced-genomic pepsin A, putative, expressed| Length = 2018 Score = 27.6 bits (54), Expect(2) = 8.6 Identities = 13/33 (39%), Positives = 14/33 (42%) Frame = +3 / -3 Query: 288 PAAEPDSTTLSLRCYPGSDPRQARWYLWHWGRC 386 P P SLR P S PR +R W RC Sbjct: 1509 PPGRPPERRCSLRRRPASHPRPSRC*NWVSSRC 1411 Score = 23.5 bits (45), Expect(2) = 8.6 Identities = 8/14 (57%), Positives = 9/14 (64%) Frame = +2 / -2 Query: 413 RSSPQSATWASTVG 454 RSSP S TW + G Sbjct: 313 RSSPDSGTWGAHTG 272
>LOC_Os08g31760:12008.t02921:unspliced-genomic expressed protein| Length = 2124 Score = 26.3 bits (51), Expect(2) = 9.0 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = -2 / -3 Query: 246 PLRGPGNWKILHRETPLHHVILART 172 P R G ++LHR HH++L T Sbjct: 460 PHRSRGTLRLLHRRRHHHHLLLLPT 386 Score = 24.9 bits (48), Expect(2) = 9.0 Identities = 8/15 (53%), Positives = 9/15 (60%) Frame = -1 / -2 Query: 379 PQCQRYHRACLGSLP 335 P C R+H C SLP Sbjct: 899 PHCSRWHSPCHHSLP 855
>LOC_Os09g10440:12009.t00836:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 1161 Score = 28.1 bits (55), Expect(2) = 9.4 Identities = 10/26 (38%), Positives = 13/26 (50%) Frame = +1 / +3 Query: 247 WKGGCEHEVREKCCQQLSQIAPHCRC 324 W G C+ EV EK C+ S + C Sbjct: 18 WSGYCQCEVIEKLCRDASHVLGRGSC 95 Score = 22.1 bits (42), Expect(2) = 9.4 Identities = 12/34 (35%), Positives = 15/34 (44%) Frame = +3 / +3 Query: 318 SLRCYPGSDPRQARWYLWHWGRCCIQTNSEGPDP 419 SLR PG R+ R +GRC Q + P Sbjct: 603 SLRVLPGG**RRRRLVGLSYGRCLWQRRAAALSP 704
>LOC_Os06g09230:12006.t00802:unspliced-genomic serine threonine kinase, putative, expressed| Length = 4511 Score = 27.2 bits (53), Expect(2) = 9.5 Identities = 9/19 (47%), Positives = 15/19 (78%) Frame = +1 / -2 Query: 145 QCPQERPNLGSCKDYVMER 201 QCPQ++ +LG+ K Y+ E+ Sbjct: 4108 QCPQQQCHLGTTKLYISEQ 4052 Score = 24.9 bits (48), Expect(2) = 9.5 Identities = 9/27 (33%), Positives = 12/27 (44%) Frame = +2 / -2 Query: 410 PRSSPQSATWASTVGSLVAITGDDIAP 490 PRS + W S +G L + I P Sbjct: 3220 PRSMARPTWWVSPIGGLAVMIWSSITP 3140
>LOC_Os11g17530:12011.t01531:unspliced-genomic pentatricopeptide repeat protein PPR986-12, putative, expressed| Length = 4284 Score = 24.0 bits (46), Expect(2) = 9.9 Identities = 10/25 (40%), Positives = 12/25 (48%) Frame = +3 / -2 Query: 372 HWGRCCIQTNSEGPDPPLKVQHGRR 446 H RCC +S P P + GRR Sbjct: 185 HPRRCCASASSRQPPLPGWLPRGRR 111 Score = 23.5 bits (45), Expect(2) = 9.9 Identities = 6/13 (46%), Positives = 9/13 (69%) Frame = +1 / -2 Query: 286 CQQLSQIAPHCRC 324 C+ ++AP CRC Sbjct: 344 CRSRPRVAPQCRC 306 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 268,096,708 Number of extensions: 4658725 Number of successful extensions: 20994 Number of sequences better than 10.0: 67 Length of query: 202 Length of database: 55,613,886 Length adjustment: 48 Effective length of query: 154 Effective length of database: 52,912,542 Effective search space: 8148531468 Effective search space used: 8148531468 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
