ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf168p04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK067782:Os06g0119900 49 3e-06
2Os06g0638000:Os06g0638000 32 0.43
3AK108650:Os02g0673000 32 0.43
4AK109007:Os03g0841600 32 0.57
5AK121820:Os04g0650700 32 0.74
6AK065027:Os07g0107000 31 1.3
7AK073544:Os01g0895300 30 1.7
8Os01g0555400:Os01g0555400 30 2.2
9AK106270:Os12g0143200 30 2.8
10AK101283:Os09g0252700 30 2.8
11Os02g0608800:Os02g0608800 29 4.8
12AK109833:Os02g0461600 29 4.8
13AK109711:Os03g0358700 29 4.8
14AK109628:Os04g0389800 29 4.8
15AK109594:Os01g0881800 29 4.8
16AK105240:Os02g0461600 29 4.8
17AK068693:Os04g0650700 29 4.8
18AK061502:Os04g0650700 29 4.8
19Os12g0226300:Os12g0226300 28 6.3
20Os03g0821200:Os03g0821200 28 6.3
21Os02g0765900:Os02g0765900 28 6.3
22Os01g0353400:Os01g0353400 28 6.3
23AK101097:Os06g0154900 28 6.3
24AK105093:Os04g0338100 28 8.2

>AK067782:Os06g0119900 |
          Length = 218
 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 50/165 (30%), Positives = 65/165 (39%), Gaps = 3/165 (1%)
 Frame = +2

Query: 35  FWTTRNYIXXXXXXXXXXXXIIIVVSVLLSPAHISFSIVHASRSGSQLQ---YLNVTIAA 205
           +W+T+ YI            I+I +S LLSP  I FS+  ASR    L     LN+T+AA
Sbjct: 28  YWSTKQYILVAVVGTLAATVIVIGISALLSPGEIDFSVTKASRMILPLDGGVELNLTVAA 87

Query: 206 DNASQKRAAVRYQGIFVDLKNSTNPAGPSTKHALVYAAPPTDEYLPPGTGRAIINASVKV 385
            N    RAAV Y+G  V L  +     P+  +    ++  T    PP    AI    V+V
Sbjct: 88  ANPGW-RAAVEYRGFDVKLHYTPFDGEPTLLNEDDASSVRTPFVQPPRNTTAI---PVRV 143

Query: 386 LAIGTSGSFVGGRLNXXXXXXXXXXXXXXXXXKIPTRVYDIKASC 520
              G        R N                 K  TR Y I  SC
Sbjct: 144 FVSGDYWVQNMMRGNDIPITAQVTATVRFLIGKACTRSYHIAVSC 188



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>Os06g0638000:Os06g0638000 |
          Length = 2068

 Score = 32.3 bits (72), Expect = 0.43
 Identities = 27/103 (26%), Positives = 33/103 (32%), Gaps = 7/103 (6%)
 Frame = +1

Query: 79  PRRHGNHHRRLCPPQPRAHQLLHSARLAERLPAAVPXXXXXXXXCQPETRGGAVP----G 246
           P  H +HH    PP+ + H   H  +L    P   P         +P       P     
Sbjct: 60  PDHHHHHHHHHPPPRVQHHHHHHHQQLPAPTPPPPPPPPLPQHRLEPPPPHYGFPPRGHP 119

Query: 247 DLRRPQEQHQPGRAEHQARPGLRRAADGRIPA---TRHGASHH 366
           D   P   H P    H  R G     D  +PA    R G  HH
Sbjct: 120 DAYSPPPYHDPSPHHHYHRHG----GDDFLPADEIRRVGGGHH 158



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>AK108650:Os02g0673000 |
          Length = 266

 Score = 32.3 bits (72), Expect = 0.43
 Identities = 34/107 (31%), Positives = 38/107 (35%), Gaps = 5/107 (4%)
 Frame = +1

Query: 58  PGGSRRDPRRHGNHHRRLCPPQPRAHQLLHSARLAERLPAAVPXXXXXXXXCQPETRGGA 237
           PGG+      H  H R   P      + LH+       P A P         +   RGG 
Sbjct: 50  PGGAGAGQDSHHRHRRHHLP------RRLHAHLPGVGRPGAGPPHRSQHGEARVR-RGGL 102

Query: 238 VPGDLRRP-----QEQHQPGRAEHQARPGLRRAADGRIPATRHGASH 363
             G LRRP     Q      RA  Q   GL R  DGR P  R G  H
Sbjct: 103 RRGLLRRPHGGGGQVGGVQERARLQGVRGLSRPRDGRPPHGRFGFRH 149



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>AK109007:Os03g0841600 |
          Length = 389

 Score = 32.0 bits (71), Expect = 0.57
 Identities = 38/124 (30%), Positives = 44/124 (35%), Gaps = 18/124 (14%)
 Frame = +1

Query: 58  PGGSRRDPRRHGNHHRRLCPPQPR--------AHQLLHSARL--AERLPAAVPXXXXXXX 207
           P   RR P+ HG   +   PP+PR        A Q  H  R   A R    V        
Sbjct: 17  PVSWRRPPQPHGGDGQAPAPPRPRRRRRGDRPARQRRHLGRRDGAPRRGQPVHHVPPPAG 76

Query: 208 XCQPETRGGAVPGDLR----RPQEQHQPG----RAEHQARPGLRRAADGRIPATRHGASH 363
             QP  R    PG  R     P +   PG     A  + RP  RR    R  A R G + 
Sbjct: 77  AAQPGRR--RAPGQARPRRAPPGQPRAPGVPPLAARRRRRPPARRVLRRR--ARRRGRAR 132

Query: 364 HQRL 375
           H RL
Sbjct: 133 HPRL 136



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>AK121820:Os04g0650700 |
          Length = 185

 Score = 31.6 bits (70), Expect = 0.74
 Identities = 37/109 (33%), Positives = 43/109 (39%), Gaps = 6/109 (5%)
 Frame = +1

Query: 1   GCPQGCRR*VQILDDQELHPGGSRRDPRRHGNHHRRLCPPQPRAHQLLHSARLAERLPAA 180
           G   G R  +Q+ +    HP   RRD    G HH R  PP  R  + LH  R   RLP  
Sbjct: 78  GAGAGERPLLQLREGLRAHPPRHRRDG---GQHHGRPRPPLRRRLRRLH--RQEPRLPR- 131

Query: 181 VPXXXXXXXXCQPETRG----GAVPGDL-RRPQEQHQPGRAEH-QARPG 309
            P          P  R      A PG   RR Q  H  G+  H +AR G
Sbjct: 132 -PPRHGQVPPLLPRLRRRRAVRARPGSRGRRQQLLHHRGQRRHAEARQG 179



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>AK065027:Os07g0107000 |
          Length = 219

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 9/61 (14%)
 Frame = +1

Query: 79  PRRHG---------NHHRRLCPPQPRAHQLLHSARLAERLPAAVPXXXXXXXXCQPETRG 231
           PRRHG         +HHRRL  P+P AH ++H      RLP  +          + E+ G
Sbjct: 127 PRRHGRVRRPRPLHHHHRRL--PRP-AHDVVHVHPQPHRLPTRLAQRRHGGRDGEDESHG 183

Query: 232 G 234
           G
Sbjct: 184 G 184



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>AK073544:Os01g0895300 |
          Length = 376

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +1

Query: 226 RGGAVPGDLRRPQEQHQPGRAEHQARPGLRRAADGRIP 339
           RG  V    RR + +H PG  +H+ARP L   A  R+P
Sbjct: 260 RGRRVQAKRRRARRRHPPGDRDHRARPRLPPGA--RVP 295



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>Os01g0555400:Os01g0555400 |
          Length = 203

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 29/107 (27%), Positives = 36/107 (33%), Gaps = 8/107 (7%)
 Frame = +1

Query: 73  RDPRRHGNHHR-------RLCPPQPRAHQLLHSARLAER-LPAAVPXXXXXXXXCQPETR 228
           R PRRHG   R       R  PP+PR  +   +A  + R  P+ +P              
Sbjct: 33  RAPRRHGRRRRARTPPATRSAPPRPRPSRASRAAASSARSAPSRLP-------------- 78

Query: 229 GGAVPGDLRRPQEQHQPGRAEHQARPGLRRAADGRIPATRHGASHHQ 369
               P    R       G A  +  P LR AA   I     G  H Q
Sbjct: 79  ----PSQASRAATIVVAGLAHSRLLPTLRAAAAAAIAGLTRGRRHRQ 121



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>AK106270:Os12g0143200 |
          Length = 414

 Score = 29.6 bits (65), Expect = 2.8
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -1

Query: 793 QHHYKRPGAHPEKKNMQHARNNMWMNTCVHQTSGEMKPKQPKNSIS 656
           +H    P A P KK+ +   N++W  T  +   G+ K KQP N+++
Sbjct: 89  KHMALAPPAPPSKKSKKKNSNSVW--TRPNSRKGKKKAKQPANALA 132



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>AK101283:Os09g0252700 |
          Length = 1220

 Score = 29.6 bits (65), Expect = 2.8
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -1

Query: 721 MNTCVHQTSGEMKPKQPKNSIST*RSRNEIHTRAQSNISRRKRSLSSAIDWQHVDV 554
           MN    +TS        ++ IS  RS   IH   +  +SR +  LS A+D  H D+
Sbjct: 669 MNPVSVRTSSVSPWNMEQDIISAVRSAASIHRHGRHTLSRIRGRLSGAMDAAHTDI 724



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>Os02g0608800:Os02g0608800 |
          Length = 367

 Score = 28.9 bits (63), Expect = 4.8
 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
 Frame = +1

Query: 265 EQHQPGR----AEHQARPGL--RRAADGRIPATRHGASHHQRLGQS 384
           EQ QP       +H+   G   R AADGR    RHG  HH   G+S
Sbjct: 296 EQRQPEVLGEVVDHEVPVGAPPRGAADGRAVGRRHGVLHHGAGGRS 341



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>AK109833:Os02g0461600 |
          Length = 199

 Score = 28.9 bits (63), Expect = 4.8
 Identities = 27/84 (32%), Positives = 36/84 (42%)
 Frame = -1

Query: 424 PAADERPGRADRENFDRGVDDGSPRAGWQVFVRRRRGVDQGVLGARPGRVGAVLEVDEDP 245
           P+AD    R    +  RG    SP AG     R +R  D     A         +  E P
Sbjct: 68  PSADRSHRRHSHSHSHRGRSSPSPDAG-----RHKRRRDGSPAAAATDHKDD--KKPEAP 120

Query: 244 LVPHRRAFLAGIVGGDGDVEVLQL 173
           +VP + A   G+  GDGDV+V +L
Sbjct: 121 VVP-KSAAGDGVAPGDGDVDVEEL 143



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>AK109711:Os03g0358700 |
          Length = 326

 Score = 28.9 bits (63), Expect = 4.8
 Identities = 30/109 (27%), Positives = 39/109 (35%), Gaps = 9/109 (8%)
 Frame = +1

Query: 79  PRRHGNHHRRLCPPQPRAHQLLHSARLAERLPAAVPXXXXXXXXCQPETRGGAVPGDLRR 258
           PR+ G+HHRR+         +  +   AE L   +          + E R G   G+LRR
Sbjct: 143 PRQAGHHHRRVV--------VGDAVVGAEPLDVVLAEEAEGAHAEEGEPRDGEAGGELRR 194

Query: 259 PQEQHQPGRAEHQARPGLRR---------AADGRIPATRHGASHHQRLG 378
           P    +     H AR G R          A DG   A   G      LG
Sbjct: 195 P----RVAEVRHDARRGRRAPLVRAEEEVALDGLAEARHGGEVARHELG 239



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>AK109628:Os04g0389800 |
          Length = 639

 Score = 28.9 bits (63), Expect = 4.8
 Identities = 31/108 (28%), Positives = 37/108 (34%), Gaps = 6/108 (5%)
 Frame = +1

Query: 55  HPGGSRRDPRR-HGNHHRRLCPPQPRAHQLLHSARLAERLPAAVPXXXXXXXXCQPETRG 231
           HPG  R   R  H  H RR  P    A   L  A+    +  A          C+   RG
Sbjct: 441 HPGARRGHQRGGHRRHGRRAAPDVGDAALHLQEAQAVALVRRA--GRHGLRPACRRRRRG 498

Query: 232 GAVPGDLRRPQEQHQPGRAEHQARPGLRRAADG-----RIPATRHGAS 360
           G       R + + QP      AR G RR   G       PA  HG +
Sbjct: 499 GQPGRHRGRHRRRRQPPDEHPGARHGPRRGPAGEGDGAEQPAPGHGGA 546



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>AK109594:Os01g0881800 |
          Length = 368

 Score = 28.9 bits (63), Expect = 4.8
 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 17/56 (30%)
 Frame = +1

Query: 226 RGGAVPGDLRRPQEQHQPGRAEH-----------------QARPGLRRAADGRIPA 342
           RGGA PG  RRPQ      R++                  + R  +RR A GR+PA
Sbjct: 104 RGGAQPGHRRRPQAISYTVRSDRLDALALLLLLAADIPHGERRRAVRRRAPGRVPA 159



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>AK105240:Os02g0461600 |
          Length = 199

 Score = 28.9 bits (63), Expect = 4.8
 Identities = 27/84 (32%), Positives = 36/84 (42%)
 Frame = -1

Query: 424 PAADERPGRADRENFDRGVDDGSPRAGWQVFVRRRRGVDQGVLGARPGRVGAVLEVDEDP 245
           P+AD    R    +  RG    SP AG     R +R  D     A         +  E P
Sbjct: 68  PSADRSHRRHSHSHSHRGRSSPSPDAG-----RHKRRRDGSPAAAATDHKDD--KKPEAP 120

Query: 244 LVPHRRAFLAGIVGGDGDVEVLQL 173
           +VP + A   G+  GDGDV+V +L
Sbjct: 121 VVP-KSAAGDGVAPGDGDVDVEEL 143



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>AK068693:Os04g0650700 |
          Length = 162

 Score = 28.9 bits (63), Expect = 4.8
 Identities = 22/58 (37%), Positives = 26/58 (44%)
 Frame = +1

Query: 1   GCPQGCRR*VQILDDQELHPGGSRRDPRRHGNHHRRLCPPQPRAHQLLHSARLAERLP 174
           G   G R  +Q+ +    HP   RRD    G HH R  PP  R  + LH  R   RLP
Sbjct: 78  GAGAGERPLLQLREGLRAHPPRHRRDG---GQHHGRPRPPLRRRLRRLH--RQEPRLP 130



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>AK061502:Os04g0650700 |
          Length = 159

 Score = 28.9 bits (63), Expect = 4.8
 Identities = 22/58 (37%), Positives = 26/58 (44%)
 Frame = +1

Query: 1   GCPQGCRR*VQILDDQELHPGGSRRDPRRHGNHHRRLCPPQPRAHQLLHSARLAERLP 174
           G   G R  +Q+ +    HP   RRD    G HH R  PP  R  + LH  R   RLP
Sbjct: 75  GAGAGERPLLQLREGLRAHPPRHRRDG---GQHHGRPRPPLRRRLRRLH--RQEPRLP 127



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>Os12g0226300:Os12g0226300 |
          Length = 337

 Score = 28.5 bits (62), Expect = 6.3
 Identities = 30/97 (30%), Positives = 34/97 (35%), Gaps = 2/97 (2%)
 Frame = +1

Query: 58  PGGSRRDP--RRHGNHHRRLCPPQPRAHQLLHSARLAERLPAAVPXXXXXXXXCQPETRG 231
           P G RR    RR      R  PP PR    LH+AR A R PA  P               
Sbjct: 179 PAGHRRAAARRRAALRPPRRRPP-PRLPAALHAARRAGRRPAVRPR-------------- 223

Query: 232 GAVPGDLRRPQEQHQPGRAEHQARPGLRRAADGRIPA 342
            A P     P+   +P       R G R AA    P+
Sbjct: 224 -APPPRWPPPRRPRRPAALRAACRAGRRPAAPAAAPS 259



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>Os03g0821200:Os03g0821200 |
          Length = 414

 Score = 28.5 bits (62), Expect = 6.3
 Identities = 25/87 (28%), Positives = 31/87 (35%), Gaps = 2/87 (2%)
 Frame = +1

Query: 61  GGSRRDPRRHGNHHRRLCPPQPRAHQLLHSARLAERLPAAVPXXXXXXXXCQPETRGGAV 240
           GG   D   H +HH    PP P  H  L + R  + + AAV               GG  
Sbjct: 40  GGGGVDAHHHHHHHHHQLPPMPPHHGGLMAPR-PDMVAAAVAASGGGGGG------GGPT 92

Query: 241 PGDLRRPQEQHQPGRAEH--QARPGLR 315
            G   RP    +  R     Q  PGL+
Sbjct: 93  GGTAVRPGSMTERARLAKIPQPEPGLK 119



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>Os02g0765900:Os02g0765900 |
          Length = 626

 Score = 28.5 bits (62), Expect = 6.3
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 82  RRHGNHHRRLCPPQPRAHQLLHSARLAERLP 174
           R HG+ HR   PP P +  +  SA L   LP
Sbjct: 35  RTHGHPHRNSAPPPPPSPAMASSASLQRFLP 65



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>Os01g0353400:Os01g0353400 |
          Length = 217

 Score = 28.5 bits (62), Expect = 6.3
 Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
 Frame = -1

Query: 343 WQVFVRRRRGV--DQGVLGARPGRVGAVLEVDEDPLVPH---RRAFLAGIVGGDGD-VEV 182
           W   V +  G+  DQGV+     ++ AVLEV E  L      R ++LAG  GG GD V +
Sbjct: 101 WHCLVHQHVGLVRDQGVVDESVEKLRAVLEVYEARLSSSSAGRYSYLAG--GGSGDRVSL 158

Query: 181 LQLGAAPRGVHY 146
             L   P  +HY
Sbjct: 159 ADLSHVPL-MHY 169



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>AK101097:Os06g0154900 |
          Length = 121

 Score = 28.5 bits (62), Expect = 6.3
 Identities = 21/44 (47%), Positives = 21/44 (47%)
 Frame = +1

Query: 232 GAVPGDLRRPQEQHQPGRAEHQARPGLRRAADGRIPATRHGASH 363
           GAVP    RPQE   P R   QARP L R    R P    G SH
Sbjct: 34  GAVPAPGHRPQEAAPPHR-RGQARPLLPRLR--RPPRRPRGVSH 74



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>AK105093:Os04g0338100 |
          Length = 112

 Score = 28.1 bits (61), Expect = 8.2
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -1

Query: 400 RADRENFDRGVDDGSPRAGWQVFVRRRR-GVD 308
           RA R   +R +D       WQ+ +RRRR GVD
Sbjct: 6   RARRREINRSIDRSDSGRPWQLLLRRRRLGVD 37


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 23,147,059
Number of extensions: 542618
Number of successful extensions: 2161
Number of sequences better than 10.0: 24
Number of HSP's gapped: 2149
Number of HSP's successfully gapped: 24
Length of query: 287
Length of database: 15,399,855
Length adjustment: 100
Effective length of query: 187
Effective length of database: 11,395,755
Effective search space: 2131006185
Effective search space used: 2131006185
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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