ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf171d02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001054264.1| Oryza sativa (japonica cultivar-group) Os02g0677700 (Os02g0677700) mRNA, complete cds Length = 3504 Score = 708 bits (357), Expect = 0.0 Identities = 642/737 (87%) Strand = Plus / Plus Query: 510 aacaaatgggggaggggccccggaggtgcagacggtggcgtgaggcacaaggtgcccgac 569 ||||||||||||||||||||||||||||| || |||||| |||||||||||||||||| Sbjct: 567 aacaaatgggggaggggccccggaggtgcggatggtggcccgaggcacaaggtgcccgat 626 Query: 570 cggccctgcaagttcttcctcgccggagactgcacctacggcgagaagtgccgctacccc 629 |||||||||| || |||||||||||| ||||||| |||||| ||||||||||| ||||| Sbjct: 627 cggccctgcaggtacttcctcgccggcgactgcagctacggggagaagtgccgataccct 686 Query: 630 cacacatattgcatgagcaatagcatcacgctgctcacccccctccagggccacgaggag 689 ||| | || | ||||||| ||||||||||| |||| || || ||||||||||||||| || Sbjct: 687 cactcctactccatgagcgatagcatcacgatgcttactccgctccagggccacgagaag 746 Query: 690 gttgtgacagggatcgcactgcctgctgggtcagacaagctgtattctgggagtaaggat 749 |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 747 gttgtgacagggattgcactgccggctgggtcagacaagctgtattctgggagtaaggac 806 Query: 750 ggaacggtgcgcctttgggattgtcaaactggacagtgtgctggtgtcctccccgtgggg 809 ||||| |||||| | |||||||| |||||||| ||||||||||||||| || |||| Sbjct: 807 ggaactgtgcgcatgtgggattgccaaactgggcagtgtgctggtgtcatcaatatggga 866 Query: 810 ggtgaggttgggtgcatgatcagcgaggggccatgggtgtttgttggaatacctgatgct 869 ||||| | |||||||||||||| |||||||||||| | |||||||| || || |||||| Sbjct: 867 cgtgagatcgggtgcatgatcagtgaggggccatggttatttgttgggattccagatgct 926 Query: 870 gtgaaggtttggaatatgcaaactcaagcagaaatgaaccttaccgggccgactggacaa 929 ||||||||||||||||||||||| ||||| |||||||||||||| ||||| || || ||| Sbjct: 927 gtgaaggtttggaatatgcaaacacaagcggaaatgaaccttactgggccaacggggcaa 986 Query: 930 gtctatgcacttgcagttggcaatgagctactctttgcggcaacacaggatggaaggatt 989 ||||||||||| || ||||| ||||||||||||||||| |||||||| |||||| ||||| Sbjct: 987 gtctatgcactcgctgttggaaatgagctactctttgccgcaacacaagatggacggatt 1046 Query: 990 ttggcatggagatttagcgccgtgacaaattgttttgagccagctgcttctcttaccggg 1049 ||||| |||||||| ||||| | |||||| ||||||| |||||||| |||||| ||| Sbjct: 1047 ttggcctggagattcagcgctgcaacaaatggttttgaaccagctgcctctcttgttggg 1106 Query: 1050 caccagcttgctgttgtttcgttaatagtaggaggcatgagactttactctggctcaatg 1109 |||||||||||||| ||||| ||| ||||||||| |||||| |||||||||| |||||| Sbjct: 1107 caccagcttgctgtcgtttcattagtagtaggagccatgaggctttactctgcttcaatg 1166 Query: 1110 gataaaaccattagagtatgggatctagcaacgttgcagtgcatacagactctttctgat 1169 || ||||| |||||||| |||||| | ||||| |||||||||||||||||||||||||| Sbjct: 1167 gacaaaacaattagagtgtgggatttggcaacactgcagtgcatacagactctttctgat 1226 Query: 1170 catacgaatgtagttatgtctctactatgctgggatcagtttctgttatcttgttctttg 1229 ||||| ||| ||||||||| || | || |||||||| || || ||||| ||||| ||| Sbjct: 1227 catacaggtgttgttatgtctgtattgtgttgggatcaattcctattatcatgttccttg 1286 Query: 1230 gatcaaacaataaaagt 1246 ||||||||||||||||| Sbjct: 1287 gatcaaacaataaaagt 1303 Score = 333 bits (168), Expect = 1e-87 Identities = 240/264 (90%) Strand = Plus / Plus Query: 1308 gcacttgctcttactggcatgcctgatgcacaatcaaaacctgtgctagtatgttcatta 1367 |||||||| || | |||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 2874 gcacttgccctaagtggcatgcctgatgcacaatcaaaacctgtgctactatgttcacta 2933 Query: 1368 aatgacaacactgtccgactctatgacctgccatcgttcagtgataggggaagaatattc 1427 |||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||| Sbjct: 2934 aatgacaacactgtccgactatatgacctgccatcgttcagtgataggggcaggatattc 2993 Query: 1428 tccaagcaggaaattagggcaatacaaactggtcctggtggtttatttttcactggggat 1487 || || |||||||| |||||||||||| ||||||| ||||||||||||| ||||||||| Sbjct: 2994 tcaaaacaggaaataagggcaatacaagttggtcctagtggtttattttttactggggat 3053 Query: 1488 ggaaccggtgagctgaaggtttggcaatggattattgatgcctcccaaacctgatggata 1547 ||||| |||||||||||||| ||||||||| ||||||||| ||||| ||| ||| ||| Sbjct: 3054 ggaactggtgagctgaaggtgtggcaatgggttattgatggatcccagaccaaatgaata 3113 Query: 1548 tagtgtactctagattagtttccc 1571 |||||||||||||||||||||||| Sbjct: 3114 tagtgtactctagattagtttccc 3137 Score = 170 bits (86), Expect = 1e-38 Identities = 170/197 (86%), Gaps = 2/197 (1%) Strand = Plus / Plus Query: 216 cccaacaaaccctaggcga--cgcccatggacttcgaggccgacggccgcttcggcaaca 273 |||| ||||||||||||| ||||||||||| | ||| ||||||| ||||||||||||| Sbjct: 268 cccaccaaaccctaggcgcgccgcccatggacatagagaccgacggtcgcttcggcaaca 327 Query: 274 agcgcgtgcacaaccgcctcggaccggcgcccggtgccgcctcttcgtcttcctctacca 333 ||||||||||| |||||||||| ||||| ||| |||||||| ||||| |||| | Sbjct: 328 agcgcgtgcaccaccgcctcggcccggccaacggcgccgcctcctcgtccacctccggga 387 Query: 334 aggtctgcatccattggcgcgctgggcgatgcaatcgcttcccctgccccttcctccaca 393 ||||||||||||| |||||||| || ||||||||||||||||||||||| | |||||||| Sbjct: 388 aggtctgcatccactggcgcgccggccgatgcaatcgcttcccctgcccttacctccaca 447 Query: 394 gcgagctccctgaggcg 410 |||||||||| |||||| Sbjct: 448 gcgagctccccgaggcg 464 Score = 91.7 bits (46), Expect = 9e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 1248 tgggcagctacagaaagtggaaacttagaagtaacatatacacacaaagaggag 1301 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 1490 tgggcagctacagaaagtggaagcttggaagtaacatatacacacaaagaggag 1543 Score = 79.8 bits (40), Expect = 3e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 59 ctccgatccggatctccccatccattccggcgagccctcgccgcgtcgcttccacgcgac 118 ||||||||||||||| || | ||| |||||||||||||||||||||||| |||||||||| Sbjct: 105 ctccgatccggatcttcctacccactccggcgagccctcgccgcgtcgcctccacgcgac 164
>dbj|AK102324.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090J15, full insert sequence Length = 3505 Score = 708 bits (357), Expect = 0.0 Identities = 642/737 (87%) Strand = Plus / Plus Query: 510 aacaaatgggggaggggccccggaggtgcagacggtggcgtgaggcacaaggtgcccgac 569 ||||||||||||||||||||||||||||| || |||||| |||||||||||||||||| Sbjct: 568 aacaaatgggggaggggccccggaggtgcggatggtggcccgaggcacaaggtgcccgat 627 Query: 570 cggccctgcaagttcttcctcgccggagactgcacctacggcgagaagtgccgctacccc 629 |||||||||| || |||||||||||| ||||||| |||||| ||||||||||| ||||| Sbjct: 628 cggccctgcaggtacttcctcgccggcgactgcagctacggggagaagtgccgataccct 687 Query: 630 cacacatattgcatgagcaatagcatcacgctgctcacccccctccagggccacgaggag 689 ||| | || | ||||||| ||||||||||| |||| || || ||||||||||||||| || Sbjct: 688 cactcctactccatgagcgatagcatcacgatgcttactccgctccagggccacgagaag 747 Query: 690 gttgtgacagggatcgcactgcctgctgggtcagacaagctgtattctgggagtaaggat 749 |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 748 gttgtgacagggattgcactgccggctgggtcagacaagctgtattctgggagtaaggac 807 Query: 750 ggaacggtgcgcctttgggattgtcaaactggacagtgtgctggtgtcctccccgtgggg 809 ||||| |||||| | |||||||| |||||||| ||||||||||||||| || |||| Sbjct: 808 ggaactgtgcgcatgtgggattgccaaactgggcagtgtgctggtgtcatcaatatggga 867 Query: 810 ggtgaggttgggtgcatgatcagcgaggggccatgggtgtttgttggaatacctgatgct 869 ||||| | |||||||||||||| |||||||||||| | |||||||| || || |||||| Sbjct: 868 cgtgagatcgggtgcatgatcagtgaggggccatggttatttgttgggattccagatgct 927 Query: 870 gtgaaggtttggaatatgcaaactcaagcagaaatgaaccttaccgggccgactggacaa 929 ||||||||||||||||||||||| ||||| |||||||||||||| ||||| || || ||| Sbjct: 928 gtgaaggtttggaatatgcaaacacaagcggaaatgaaccttactgggccaacggggcaa 987 Query: 930 gtctatgcacttgcagttggcaatgagctactctttgcggcaacacaggatggaaggatt 989 ||||||||||| || ||||| ||||||||||||||||| |||||||| |||||| ||||| Sbjct: 988 gtctatgcactcgctgttggaaatgagctactctttgccgcaacacaagatggacggatt 1047 Query: 990 ttggcatggagatttagcgccgtgacaaattgttttgagccagctgcttctcttaccggg 1049 ||||| |||||||| ||||| | |||||| ||||||| |||||||| |||||| ||| Sbjct: 1048 ttggcctggagattcagcgctgcaacaaatggttttgaaccagctgcctctcttgttggg 1107 Query: 1050 caccagcttgctgttgtttcgttaatagtaggaggcatgagactttactctggctcaatg 1109 |||||||||||||| ||||| ||| ||||||||| |||||| |||||||||| |||||| Sbjct: 1108 caccagcttgctgtcgtttcattagtagtaggagccatgaggctttactctgcttcaatg 1167 Query: 1110 gataaaaccattagagtatgggatctagcaacgttgcagtgcatacagactctttctgat 1169 || ||||| |||||||| |||||| | ||||| |||||||||||||||||||||||||| Sbjct: 1168 gacaaaacaattagagtgtgggatttggcaacactgcagtgcatacagactctttctgat 1227 Query: 1170 catacgaatgtagttatgtctctactatgctgggatcagtttctgttatcttgttctttg 1229 ||||| ||| ||||||||| || | || |||||||| || || ||||| ||||| ||| Sbjct: 1228 catacaggtgttgttatgtctgtattgtgttgggatcaattcctattatcatgttccttg 1287 Query: 1230 gatcaaacaataaaagt 1246 ||||||||||||||||| Sbjct: 1288 gatcaaacaataaaagt 1304 Score = 333 bits (168), Expect = 1e-87 Identities = 240/264 (90%) Strand = Plus / Plus Query: 1308 gcacttgctcttactggcatgcctgatgcacaatcaaaacctgtgctagtatgttcatta 1367 |||||||| || | |||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 2875 gcacttgccctaagtggcatgcctgatgcacaatcaaaacctgtgctactatgttcacta 2934 Query: 1368 aatgacaacactgtccgactctatgacctgccatcgttcagtgataggggaagaatattc 1427 |||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||| Sbjct: 2935 aatgacaacactgtccgactatatgacctgccatcgttcagtgataggggcaggatattc 2994 Query: 1428 tccaagcaggaaattagggcaatacaaactggtcctggtggtttatttttcactggggat 1487 || || |||||||| |||||||||||| ||||||| ||||||||||||| ||||||||| Sbjct: 2995 tcaaaacaggaaataagggcaatacaagttggtcctagtggtttattttttactggggat 3054 Query: 1488 ggaaccggtgagctgaaggtttggcaatggattattgatgcctcccaaacctgatggata 1547 ||||| |||||||||||||| ||||||||| ||||||||| ||||| ||| ||| ||| Sbjct: 3055 ggaactggtgagctgaaggtgtggcaatgggttattgatggatcccagaccaaatgaata 3114 Query: 1548 tagtgtactctagattagtttccc 1571 |||||||||||||||||||||||| Sbjct: 3115 tagtgtactctagattagtttccc 3138 Score = 170 bits (86), Expect = 1e-38 Identities = 170/197 (86%), Gaps = 2/197 (1%) Strand = Plus / Plus Query: 216 cccaacaaaccctaggcga--cgcccatggacttcgaggccgacggccgcttcggcaaca 273 |||| ||||||||||||| ||||||||||| | ||| ||||||| ||||||||||||| Sbjct: 269 cccaccaaaccctaggcgcgccgcccatggacatagagaccgacggtcgcttcggcaaca 328 Query: 274 agcgcgtgcacaaccgcctcggaccggcgcccggtgccgcctcttcgtcttcctctacca 333 ||||||||||| |||||||||| ||||| ||| |||||||| ||||| |||| | Sbjct: 329 agcgcgtgcaccaccgcctcggcccggccaacggcgccgcctcctcgtccacctccggga 388 Query: 334 aggtctgcatccattggcgcgctgggcgatgcaatcgcttcccctgccccttcctccaca 393 ||||||||||||| |||||||| || ||||||||||||||||||||||| | |||||||| Sbjct: 389 aggtctgcatccactggcgcgccggccgatgcaatcgcttcccctgcccttacctccaca 448 Query: 394 gcgagctccctgaggcg 410 |||||||||| |||||| Sbjct: 449 gcgagctccccgaggcg 465 Score = 91.7 bits (46), Expect = 9e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 1248 tgggcagctacagaaagtggaaacttagaagtaacatatacacacaaagaggag 1301 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 1491 tgggcagctacagaaagtggaagcttggaagtaacatatacacacaaagaggag 1544 Score = 79.8 bits (40), Expect = 3e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 59 ctccgatccggatctccccatccattccggcgagccctcgccgcgtcgcttccacgcgac 118 ||||||||||||||| || | ||| |||||||||||||||||||||||| |||||||||| Sbjct: 106 ctccgatccggatcttcctacccactccggcgagccctcgccgcgtcgcctccacgcgac 165
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 192 bits (97), Expect = 3e-45 Identities = 151/169 (89%) Strand = Plus / Plus Query: 1403 gttcagtgataggggaagaatattctccaagcaggaaattagggcaatacaaactggtcc 1462 ||||||||||||||| || |||||||| || |||||||| |||||||||||| |||||| Sbjct: 27685308 gttcagtgataggggcaggatattctcaaaacaggaaataagggcaatacaagttggtcc 27685367 Query: 1463 tggtggtttatttttcactggggatggaaccggtgagctgaaggtttggcaatggattat 1522 | ||||||||||||| |||||||||||||| |||||||||||||| ||||||||| |||| Sbjct: 27685368 tagtggtttattttttactggggatggaactggtgagctgaaggtgtggcaatgggttat 27685427 Query: 1523 tgatgcctcccaaacctgatggatatagtgtactctagattagtttccc 1571 ||||| ||||| ||| ||| ||||||||||||||||||||||||||| Sbjct: 27685428 tgatggatcccagaccaaatgaatatagtgtactctagattagtttccc 27685476 Score = 186 bits (94), Expect = 2e-43 Identities = 160/182 (87%) Strand = Plus / Plus Query: 510 aacaaatgggggaggggccccggaggtgcagacggtggcgtgaggcacaaggtgcccgac 569 ||||||||||||||||||||||||||||| || |||||| |||||||||||||||||| Sbjct: 27681477 aacaaatgggggaggggccccggaggtgcggatggtggcccgaggcacaaggtgcccgat 27681536 Query: 570 cggccctgcaagttcttcctcgccggagactgcacctacggcgagaagtgccgctacccc 629 |||||||||| || |||||||||||| ||||||| |||||| ||||||||||| ||||| Sbjct: 27681537 cggccctgcaggtacttcctcgccggcgactgcagctacggggagaagtgccgataccct 27681596 Query: 630 cacacatattgcatgagcaatagcatcacgctgctcacccccctccagggccacgaggag 689 ||| | || | ||||||| ||||||||||| |||| || || ||||||||||||||| || Sbjct: 27681597 cactcctactccatgagcgatagcatcacgatgcttactccgctccagggccacgagaag 27681656 Query: 690 gt 691 || Sbjct: 27681657 gt 27681658 Score = 170 bits (86), Expect = 1e-38 Identities = 170/197 (86%), Gaps = 2/197 (1%) Strand = Plus / Plus Query: 216 cccaacaaaccctaggcga--cgcccatggacttcgaggccgacggccgcttcggcaaca 273 |||| ||||||||||||| ||||||||||| | ||| ||||||| ||||||||||||| Sbjct: 27681178 cccaccaaaccctaggcgcgccgcccatggacatagagaccgacggtcgcttcggcaaca 27681237 Query: 274 agcgcgtgcacaaccgcctcggaccggcgcccggtgccgcctcttcgtcttcctctacca 333 ||||||||||| |||||||||| ||||| ||| |||||||| ||||| |||| | Sbjct: 27681238 agcgcgtgcaccaccgcctcggcccggccaacggcgccgcctcctcgtccacctccggga 27681297 Query: 334 aggtctgcatccattggcgcgctgggcgatgcaatcgcttcccctgccccttcctccaca 393 ||||||||||||| |||||||| || ||||||||||||||||||||||| | |||||||| Sbjct: 27681298 aggtctgcatccactggcgcgccggccgatgcaatcgcttcccctgcccttacctccaca 27681357 Query: 394 gcgagctccctgaggcg 410 |||||||||| |||||| Sbjct: 27681358 gcgagctccccgaggcg 27681374 Score = 145 bits (73), Expect = 7e-31 Identities = 91/97 (93%) Strand = Plus / Plus Query: 1308 gcacttgctcttactggcatgcctgatgcacaatcaaaacctgtgctagtatgttcatta 1367 |||||||| || | |||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 27685136 gcacttgccctaagtggcatgcctgatgcacaatcaaaacctgtgctactatgttcacta 27685195 Query: 1368 aatgacaacactgtccgactctatgacctgccatcgt 1404 |||||||||||||||||||| |||||||||||||||| Sbjct: 27685196 aatgacaacactgtccgactatatgacctgccatcgt 27685232 Score = 137 bits (69), Expect = 2e-28 Identities = 132/153 (86%) Strand = Plus / Plus Query: 975 caggatggaaggattttggcatggagatttagcgccgtgacaaattgttttgagccagct 1034 ||||||||| |||||||||| |||||||| ||||| | |||||| ||||||| |||||| Sbjct: 27682307 caggatggacggattttggcctggagattcagcgctgcaacaaatggttttgaaccagct 27682366 Query: 1035 gcttctcttaccgggcaccagcttgctgttgtttcgttaatagtaggaggcatgagactt 1094 || |||||| ||||||||||||||||| ||||| ||| ||||||||| |||||| ||| Sbjct: 27682367 gcctctcttgttgggcaccagcttgctgtcgtttcattagtagtaggagccatgaggctt 27682426 Query: 1095 tactctggctcaatggataaaaccattagagta 1127 ||||||| |||||||| ||||| ||||||||| Sbjct: 27682427 tactctgcttcaatggacaaaacaattagagta 27682459 Score = 131 bits (66), Expect = 1e-26 Identities = 87/94 (92%) Strand = Plus / Plus Query: 688 aggttgtgacagggatcgcactgcctgctgggtcagacaagctgtattctgggagtaagg 747 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 27681743 aggttgtgacagggattgcactgccggctgggtcagacaagctgtattctgggagtaagg 27681802 Query: 748 atggaacggtgcgcctttgggattgtcaaactgg 781 | ||||| |||||| | |||||||| |||||||| Sbjct: 27681803 acggaactgtgcgcatgtgggattgccaaactgg 27681836 Score = 125 bits (63), Expect = 6e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 874 aggtttggaatatgcaaactcaagcagaaatgaaccttaccgggccgactggacaagtct 933 ||||||||||||||||||| ||||| |||||||||||||| ||||| || || ||||||| Sbjct: 27682124 aggtttggaatatgcaaacacaagcggaaatgaaccttactgggccaacggggcaagtct 27682183 Query: 934 atgcacttgcagttggcaatgagctactctttgcggcaacaca 976 ||||||| || ||||| ||||||||||||||||| |||||||| Sbjct: 27682184 atgcactcgctgttggaaatgagctactctttgccgcaacaca 27682226 Score = 101 bits (51), Expect = 9e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 1144 tgcagtgcatacagactctttctgatcatacgaatgtagttatgtctctactatgctggg 1203 ||||||||||||||||||||||||||||||| ||| ||||||||| || | || |||| Sbjct: 27683463 tgcagtgcatacagactctttctgatcatacaggtgttgttatgtctgtattgtgttggg 27683522 Query: 1204 atcagtttctgttatcttgttctttggatcaaacaataaaagt 1246 |||| || || ||||| ||||| |||||||||||||||||||| Sbjct: 27683523 atcaattcctattatcatgttccttggatcaaacaataaaagt 27683565 Score = 91.7 bits (46), Expect = 9e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 1248 tgggcagctacagaaagtggaaacttagaagtaacatatacacacaaagaggag 1301 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 27683752 tgggcagctacagaaagtggaagcttggaagtaacatatacacacaaagaggag 27683805 Score = 79.8 bits (40), Expect = 3e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 59 ctccgatccggatctccccatccattccggcgagccctcgccgcgtcgcttccacgcgac 118 ||||||||||||||| || | ||| |||||||||||||||||||||||| |||||||||| Sbjct: 27681015 ctccgatccggatcttcctacccactccggcgagccctcgccgcgtcgcctccacgcgac 27681074 Score = 69.9 bits (35), Expect = 3e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 819 gggtgcatgatcagcgaggggccatgggtgtttgttggaatacctgatgctgtgaaggt 877 |||||||||||||| |||||||||||| | |||||||| || || |||||||||||||| Sbjct: 27681966 gggtgcatgatcagtgaggggccatggttatttgttgggattccagatgctgtgaaggt 27682024 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Plus Query: 485 ggggcgcggcggcggcggtggctac 509 ||||||||||||||||||||||||| Sbjct: 22646113 ggggcgcggcggcggcggtggctac 22646137 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 477 ggaggaggggggcgcggcggcggcgg 502 |||||||| ||||||||||||||||| Sbjct: 32399771 ggaggaggcgggcgcggcggcggcgg 32399796 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 477 ggaggaggggggcgcggcggcggcggtgg 505 ||||||||| | ||||||||||||||||| Sbjct: 2041816 ggaggagggagccgcggcggcggcggtgg 2041788
>dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0135D07 Length = 170587 Score = 192 bits (97), Expect = 3e-45 Identities = 151/169 (89%) Strand = Plus / Plus Query: 1403 gttcagtgataggggaagaatattctccaagcaggaaattagggcaatacaaactggtcc 1462 ||||||||||||||| || |||||||| || |||||||| |||||||||||| |||||| Sbjct: 164977 gttcagtgataggggcaggatattctcaaaacaggaaataagggcaatacaagttggtcc 165036 Query: 1463 tggtggtttatttttcactggggatggaaccggtgagctgaaggtttggcaatggattat 1522 | ||||||||||||| |||||||||||||| |||||||||||||| ||||||||| |||| Sbjct: 165037 tagtggtttattttttactggggatggaactggtgagctgaaggtgtggcaatgggttat 165096 Query: 1523 tgatgcctcccaaacctgatggatatagtgtactctagattagtttccc 1571 ||||| ||||| ||| ||| ||||||||||||||||||||||||||| Sbjct: 165097 tgatggatcccagaccaaatgaatatagtgtactctagattagtttccc 165145 Score = 186 bits (94), Expect = 2e-43 Identities = 160/182 (87%) Strand = Plus / Plus Query: 510 aacaaatgggggaggggccccggaggtgcagacggtggcgtgaggcacaaggtgcccgac 569 ||||||||||||||||||||||||||||| || |||||| |||||||||||||||||| Sbjct: 161146 aacaaatgggggaggggccccggaggtgcggatggtggcccgaggcacaaggtgcccgat 161205 Query: 570 cggccctgcaagttcttcctcgccggagactgcacctacggcgagaagtgccgctacccc 629 |||||||||| || |||||||||||| ||||||| |||||| ||||||||||| ||||| Sbjct: 161206 cggccctgcaggtacttcctcgccggcgactgcagctacggggagaagtgccgataccct 161265 Query: 630 cacacatattgcatgagcaatagcatcacgctgctcacccccctccagggccacgaggag 689 ||| | || | ||||||| ||||||||||| |||| || || ||||||||||||||| || Sbjct: 161266 cactcctactccatgagcgatagcatcacgatgcttactccgctccagggccacgagaag 161325 Query: 690 gt 691 || Sbjct: 161326 gt 161327 Score = 170 bits (86), Expect = 1e-38 Identities = 170/197 (86%), Gaps = 2/197 (1%) Strand = Plus / Plus Query: 216 cccaacaaaccctaggcga--cgcccatggacttcgaggccgacggccgcttcggcaaca 273 |||| ||||||||||||| ||||||||||| | ||| ||||||| ||||||||||||| Sbjct: 160847 cccaccaaaccctaggcgcgccgcccatggacatagagaccgacggtcgcttcggcaaca 160906 Query: 274 agcgcgtgcacaaccgcctcggaccggcgcccggtgccgcctcttcgtcttcctctacca 333 ||||||||||| |||||||||| ||||| ||| |||||||| ||||| |||| | Sbjct: 160907 agcgcgtgcaccaccgcctcggcccggccaacggcgccgcctcctcgtccacctccggga 160966 Query: 334 aggtctgcatccattggcgcgctgggcgatgcaatcgcttcccctgccccttcctccaca 393 ||||||||||||| |||||||| || ||||||||||||||||||||||| | |||||||| Sbjct: 160967 aggtctgcatccactggcgcgccggccgatgcaatcgcttcccctgcccttacctccaca 161026 Query: 394 gcgagctccctgaggcg 410 |||||||||| |||||| Sbjct: 161027 gcgagctccccgaggcg 161043 Score = 145 bits (73), Expect = 7e-31 Identities = 91/97 (93%) Strand = Plus / Plus Query: 1308 gcacttgctcttactggcatgcctgatgcacaatcaaaacctgtgctagtatgttcatta 1367 |||||||| || | |||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 164805 gcacttgccctaagtggcatgcctgatgcacaatcaaaacctgtgctactatgttcacta 164864 Query: 1368 aatgacaacactgtccgactctatgacctgccatcgt 1404 |||||||||||||||||||| |||||||||||||||| Sbjct: 164865 aatgacaacactgtccgactatatgacctgccatcgt 164901 Score = 137 bits (69), Expect = 2e-28 Identities = 132/153 (86%) Strand = Plus / Plus Query: 975 caggatggaaggattttggcatggagatttagcgccgtgacaaattgttttgagccagct 1034 ||||||||| |||||||||| |||||||| ||||| | |||||| ||||||| |||||| Sbjct: 161976 caggatggacggattttggcctggagattcagcgctgcaacaaatggttttgaaccagct 162035 Query: 1035 gcttctcttaccgggcaccagcttgctgttgtttcgttaatagtaggaggcatgagactt 1094 || |||||| ||||||||||||||||| ||||| ||| ||||||||| |||||| ||| Sbjct: 162036 gcctctcttgttgggcaccagcttgctgtcgtttcattagtagtaggagccatgaggctt 162095 Query: 1095 tactctggctcaatggataaaaccattagagta 1127 ||||||| |||||||| ||||| ||||||||| Sbjct: 162096 tactctgcttcaatggacaaaacaattagagta 162128 Score = 131 bits (66), Expect = 1e-26 Identities = 87/94 (92%) Strand = Plus / Plus Query: 688 aggttgtgacagggatcgcactgcctgctgggtcagacaagctgtattctgggagtaagg 747 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 161412 aggttgtgacagggattgcactgccggctgggtcagacaagctgtattctgggagtaagg 161471 Query: 748 atggaacggtgcgcctttgggattgtcaaactgg 781 | ||||| |||||| | |||||||| |||||||| Sbjct: 161472 acggaactgtgcgcatgtgggattgccaaactgg 161505 Score = 125 bits (63), Expect = 6e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 874 aggtttggaatatgcaaactcaagcagaaatgaaccttaccgggccgactggacaagtct 933 ||||||||||||||||||| ||||| |||||||||||||| ||||| || || ||||||| Sbjct: 161793 aggtttggaatatgcaaacacaagcggaaatgaaccttactgggccaacggggcaagtct 161852 Query: 934 atgcacttgcagttggcaatgagctactctttgcggcaacaca 976 ||||||| || ||||| ||||||||||||||||| |||||||| Sbjct: 161853 atgcactcgctgttggaaatgagctactctttgccgcaacaca 161895 Score = 101 bits (51), Expect = 9e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 1144 tgcagtgcatacagactctttctgatcatacgaatgtagttatgtctctactatgctggg 1203 ||||||||||||||||||||||||||||||| ||| ||||||||| || | || |||| Sbjct: 163132 tgcagtgcatacagactctttctgatcatacaggtgttgttatgtctgtattgtgttggg 163191 Query: 1204 atcagtttctgttatcttgttctttggatcaaacaataaaagt 1246 |||| || || ||||| ||||| |||||||||||||||||||| Sbjct: 163192 atcaattcctattatcatgttccttggatcaaacaataaaagt 163234 Score = 91.7 bits (46), Expect = 9e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 1248 tgggcagctacagaaagtggaaacttagaagtaacatatacacacaaagaggag 1301 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 163421 tgggcagctacagaaagtggaagcttggaagtaacatatacacacaaagaggag 163474 Score = 79.8 bits (40), Expect = 3e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 59 ctccgatccggatctccccatccattccggcgagccctcgccgcgtcgcttccacgcgac 118 ||||||||||||||| || | ||| |||||||||||||||||||||||| |||||||||| Sbjct: 160684 ctccgatccggatcttcctacccactccggcgagccctcgccgcgtcgcctccacgcgac 160743 Score = 69.9 bits (35), Expect = 3e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 819 gggtgcatgatcagcgaggggccatgggtgtttgttggaatacctgatgctgtgaaggt 877 |||||||||||||| |||||||||||| | |||||||| || || |||||||||||||| Sbjct: 161635 gggtgcatgatcagtgaggggccatggttatttgttgggattccagatgctgtgaaggt 161693
>dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0005A04 Length = 140723 Score = 192 bits (97), Expect = 3e-45 Identities = 151/169 (89%) Strand = Plus / Plus Query: 1403 gttcagtgataggggaagaatattctccaagcaggaaattagggcaatacaaactggtcc 1462 ||||||||||||||| || |||||||| || |||||||| |||||||||||| |||||| Sbjct: 71174 gttcagtgataggggcaggatattctcaaaacaggaaataagggcaatacaagttggtcc 71233 Query: 1463 tggtggtttatttttcactggggatggaaccggtgagctgaaggtttggcaatggattat 1522 | ||||||||||||| |||||||||||||| |||||||||||||| ||||||||| |||| Sbjct: 71234 tagtggtttattttttactggggatggaactggtgagctgaaggtgtggcaatgggttat 71293 Query: 1523 tgatgcctcccaaacctgatggatatagtgtactctagattagtttccc 1571 ||||| ||||| ||| ||| ||||||||||||||||||||||||||| Sbjct: 71294 tgatggatcccagaccaaatgaatatagtgtactctagattagtttccc 71342 Score = 186 bits (94), Expect = 2e-43 Identities = 160/182 (87%) Strand = Plus / Plus Query: 510 aacaaatgggggaggggccccggaggtgcagacggtggcgtgaggcacaaggtgcccgac 569 ||||||||||||||||||||||||||||| || |||||| |||||||||||||||||| Sbjct: 67343 aacaaatgggggaggggccccggaggtgcggatggtggcccgaggcacaaggtgcccgat 67402 Query: 570 cggccctgcaagttcttcctcgccggagactgcacctacggcgagaagtgccgctacccc 629 |||||||||| || |||||||||||| ||||||| |||||| ||||||||||| ||||| Sbjct: 67403 cggccctgcaggtacttcctcgccggcgactgcagctacggggagaagtgccgataccct 67462 Query: 630 cacacatattgcatgagcaatagcatcacgctgctcacccccctccagggccacgaggag 689 ||| | || | ||||||| ||||||||||| |||| || || ||||||||||||||| || Sbjct: 67463 cactcctactccatgagcgatagcatcacgatgcttactccgctccagggccacgagaag 67522 Query: 690 gt 691 || Sbjct: 67523 gt 67524 Score = 170 bits (86), Expect = 1e-38 Identities = 170/197 (86%), Gaps = 2/197 (1%) Strand = Plus / Plus Query: 216 cccaacaaaccctaggcga--cgcccatggacttcgaggccgacggccgcttcggcaaca 273 |||| ||||||||||||| ||||||||||| | ||| ||||||| ||||||||||||| Sbjct: 67044 cccaccaaaccctaggcgcgccgcccatggacatagagaccgacggtcgcttcggcaaca 67103 Query: 274 agcgcgtgcacaaccgcctcggaccggcgcccggtgccgcctcttcgtcttcctctacca 333 ||||||||||| |||||||||| ||||| ||| |||||||| ||||| |||| | Sbjct: 67104 agcgcgtgcaccaccgcctcggcccggccaacggcgccgcctcctcgtccacctccggga 67163 Query: 334 aggtctgcatccattggcgcgctgggcgatgcaatcgcttcccctgccccttcctccaca 393 ||||||||||||| |||||||| || ||||||||||||||||||||||| | |||||||| Sbjct: 67164 aggtctgcatccactggcgcgccggccgatgcaatcgcttcccctgcccttacctccaca 67223 Query: 394 gcgagctccctgaggcg 410 |||||||||| |||||| Sbjct: 67224 gcgagctccccgaggcg 67240 Score = 145 bits (73), Expect = 7e-31 Identities = 91/97 (93%) Strand = Plus / Plus Query: 1308 gcacttgctcttactggcatgcctgatgcacaatcaaaacctgtgctagtatgttcatta 1367 |||||||| || | |||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 71002 gcacttgccctaagtggcatgcctgatgcacaatcaaaacctgtgctactatgttcacta 71061 Query: 1368 aatgacaacactgtccgactctatgacctgccatcgt 1404 |||||||||||||||||||| |||||||||||||||| Sbjct: 71062 aatgacaacactgtccgactatatgacctgccatcgt 71098 Score = 137 bits (69), Expect = 2e-28 Identities = 132/153 (86%) Strand = Plus / Plus Query: 975 caggatggaaggattttggcatggagatttagcgccgtgacaaattgttttgagccagct 1034 ||||||||| |||||||||| |||||||| ||||| | |||||| ||||||| |||||| Sbjct: 68173 caggatggacggattttggcctggagattcagcgctgcaacaaatggttttgaaccagct 68232 Query: 1035 gcttctcttaccgggcaccagcttgctgttgtttcgttaatagtaggaggcatgagactt 1094 || |||||| ||||||||||||||||| ||||| ||| ||||||||| |||||| ||| Sbjct: 68233 gcctctcttgttgggcaccagcttgctgtcgtttcattagtagtaggagccatgaggctt 68292 Query: 1095 tactctggctcaatggataaaaccattagagta 1127 ||||||| |||||||| ||||| ||||||||| Sbjct: 68293 tactctgcttcaatggacaaaacaattagagta 68325 Score = 131 bits (66), Expect = 1e-26 Identities = 87/94 (92%) Strand = Plus / Plus Query: 688 aggttgtgacagggatcgcactgcctgctgggtcagacaagctgtattctgggagtaagg 747 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 67609 aggttgtgacagggattgcactgccggctgggtcagacaagctgtattctgggagtaagg 67668 Query: 748 atggaacggtgcgcctttgggattgtcaaactgg 781 | ||||| |||||| | |||||||| |||||||| Sbjct: 67669 acggaactgtgcgcatgtgggattgccaaactgg 67702 Score = 125 bits (63), Expect = 6e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 874 aggtttggaatatgcaaactcaagcagaaatgaaccttaccgggccgactggacaagtct 933 ||||||||||||||||||| ||||| |||||||||||||| ||||| || || ||||||| Sbjct: 67990 aggtttggaatatgcaaacacaagcggaaatgaaccttactgggccaacggggcaagtct 68049 Query: 934 atgcacttgcagttggcaatgagctactctttgcggcaacaca 976 ||||||| || ||||| ||||||||||||||||| |||||||| Sbjct: 68050 atgcactcgctgttggaaatgagctactctttgccgcaacaca 68092 Score = 101 bits (51), Expect = 9e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 1144 tgcagtgcatacagactctttctgatcatacgaatgtagttatgtctctactatgctggg 1203 ||||||||||||||||||||||||||||||| ||| ||||||||| || | || |||| Sbjct: 69329 tgcagtgcatacagactctttctgatcatacaggtgttgttatgtctgtattgtgttggg 69388 Query: 1204 atcagtttctgttatcttgttctttggatcaaacaataaaagt 1246 |||| || || ||||| ||||| |||||||||||||||||||| Sbjct: 69389 atcaattcctattatcatgttccttggatcaaacaataaaagt 69431 Score = 91.7 bits (46), Expect = 9e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 1248 tgggcagctacagaaagtggaaacttagaagtaacatatacacacaaagaggag 1301 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 69618 tgggcagctacagaaagtggaagcttggaagtaacatatacacacaaagaggag 69671 Score = 79.8 bits (40), Expect = 3e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 59 ctccgatccggatctccccatccattccggcgagccctcgccgcgtcgcttccacgcgac 118 ||||||||||||||| || | ||| |||||||||||||||||||||||| |||||||||| Sbjct: 66881 ctccgatccggatcttcctacccactccggcgagccctcgccgcgtcgcctccacgcgac 66940 Score = 69.9 bits (35), Expect = 3e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 819 gggtgcatgatcagcgaggggccatgggtgtttgttggaatacctgatgctgtgaaggt 877 |||||||||||||| |||||||||||| | |||||||| || || |||||||||||||| Sbjct: 67832 gggtgcatgatcagtgaggggccatggttatttgttgggattccagatgctgtgaaggt 67890
>dbj|AK119947.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-C01, full insert sequence Length = 780 Score = 186 bits (94), Expect = 2e-43 Identities = 160/182 (87%) Strand = Plus / Plus Query: 510 aacaaatgggggaggggccccggaggtgcagacggtggcgtgaggcacaaggtgcccgac 569 ||||||||||||||||||||||||||||| || |||||| |||||||||||||||||| Sbjct: 567 aacaaatgggggaggggccccggaggtgcggatggtggcccgaggcacaaggtgcccgat 626 Query: 570 cggccctgcaagttcttcctcgccggagactgcacctacggcgagaagtgccgctacccc 629 |||||||||| || |||||||||||| ||||||| |||||| ||||||||||| ||||| Sbjct: 627 cggccctgcaggtacttcctcgccggcgactgcagctacggggagaagtgccgataccct 686 Query: 630 cacacatattgcatgagcaatagcatcacgctgctcacccccctccagggccacgaggag 689 ||| | || | ||||||| ||||||||||| |||| || || ||||||||||||||| || Sbjct: 687 cactcctactccatgagcgatagcatcacgatgcttactccgctccagggccacgagaag 746 Query: 690 gt 691 || Sbjct: 747 gt 748 Score = 170 bits (86), Expect = 1e-38 Identities = 170/197 (86%), Gaps = 2/197 (1%) Strand = Plus / Plus Query: 216 cccaacaaaccctaggcga--cgcccatggacttcgaggccgacggccgcttcggcaaca 273 |||| ||||||||||||| ||||||||||| | ||| ||||||| ||||||||||||| Sbjct: 268 cccaccaaaccctaggcgcgccgcccatggacatagagaccgacggtcgcttcggcaaca 327 Query: 274 agcgcgtgcacaaccgcctcggaccggcgcccggtgccgcctcttcgtcttcctctacca 333 ||||||||||| |||||||||| ||||| ||| |||||||| ||||| |||| | Sbjct: 328 agcgcgtgcaccaccgcctcggcccggccaacggcgccgcctcctcgtccacctccggga 387 Query: 334 aggtctgcatccattggcgcgctgggcgatgcaatcgcttcccctgccccttcctccaca 393 ||||||||||||| |||||||| || ||||||||||||||||||||||| | |||||||| Sbjct: 388 aggtctgcatccactggcgcgccggccgatgcaatcgcttcccctgcccttacctccaca 447 Query: 394 gcgagctccctgaggcg 410 |||||||||| |||||| Sbjct: 448 gcgagctccccgaggcg 464 Score = 79.8 bits (40), Expect = 3e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 59 ctccgatccggatctccccatccattccggcgagccctcgccgcgtcgcttccacgcgac 118 ||||||||||||||| || | ||| |||||||||||||||||||||||| |||||||||| Sbjct: 105 ctccgatccggatcttcctacccactccggcgagccctcgccgcgtcgcctccacgcgac 164
>ref|NM_001060145.1| Oryza sativa (japonica cultivar-group) Os04g0572700 (Os04g0572700) mRNA, partial cds Length = 1939 Score = 85.7 bits (43), Expect = 5e-13 Identities = 126/153 (82%), Gaps = 8/153 (5%) Strand = Plus / Plus Query: 1197 tgctgggatcagtttctgttatcttgttctttggatcaaacaataaaagtctgggcagct 1256 ||||||||||| ||||| |||||||||||| ||||||||||||| || |||||||| ||| Sbjct: 1063 tgctgggatcaatttctattatcttgttctctggatcaaacaatcaaggtctgggctgct 1122 Query: 1257 acagaaag-tggaaact-------tagaagtaacatatacacacaaagaggagaatggtg 1308 | ||||| |||||||| | | ||||||||||||||| || || || |||||| Sbjct: 1123 atggaaagttggaaactggaagcctggcagtaacatatacacataacgaagatcatggtg 1182 Query: 1309 cacttgctcttactggcatgcctgatgcacaat 1341 ||||||||||| |||| |||| |||||||||| Sbjct: 1183 cacttgctcttgctggtatgcaagatgcacaat 1215 Score = 46.1 bits (23), Expect = 0.46 Identities = 35/39 (89%) Strand = Plus / Plus Query: 372 ttcccctgccccttcctccacagcgagctccctgaggcg 410 |||||||||| || |||||||||||| ||||| |||||| Sbjct: 192 ttcccctgccgctacctccacagcgaactccccgaggcg 230 Score = 46.1 bits (23), Expect = 0.46 Identities = 26/27 (96%) Strand = Plus / Plus Query: 849 tttgttggaatacctgatgctgtgaag 875 ||||||||||| ||||||||||||||| Sbjct: 534 tttgttggaattcctgatgctgtgaag 560 Score = 44.1 bits (22), Expect = 1.8 Identities = 37/42 (88%) Strand = Plus / Plus Query: 572 gccctgcaagttcttcctcgccggagactgcacctacggcga 613 ||||||||||||||||||| |||| || |||| |||||||| Sbjct: 326 gccctgcaagttcttcctctccggtgattgcaggtacggcga 367
>dbj|AK103254.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123O13, full insert sequence Length = 1946 Score = 85.7 bits (43), Expect = 5e-13 Identities = 126/153 (82%), Gaps = 8/153 (5%) Strand = Plus / Plus Query: 1197 tgctgggatcagtttctgttatcttgttctttggatcaaacaataaaagtctgggcagct 1256 ||||||||||| ||||| |||||||||||| ||||||||||||| || |||||||| ||| Sbjct: 1070 tgctgggatcaatttctattatcttgttctctggatcaaacaatcaaggtctgggctgct 1129 Query: 1257 acagaaag-tggaaact-------tagaagtaacatatacacacaaagaggagaatggtg 1308 | ||||| |||||||| | | ||||||||||||||| || || || |||||| Sbjct: 1130 atggaaagttggaaactggaagcctggcagtaacatatacacataacgaagatcatggtg 1189 Query: 1309 cacttgctcttactggcatgcctgatgcacaat 1341 ||||||||||| |||| |||| |||||||||| Sbjct: 1190 cacttgctcttgctggtatgcaagatgcacaat 1222 Score = 46.1 bits (23), Expect = 0.46 Identities = 35/39 (89%) Strand = Plus / Plus Query: 372 ttcccctgccccttcctccacagcgagctccctgaggcg 410 |||||||||| || |||||||||||| ||||| |||||| Sbjct: 199 ttcccctgccgctacctccacagcgaactccccgaggcg 237 Score = 46.1 bits (23), Expect = 0.46 Identities = 26/27 (96%) Strand = Plus / Plus Query: 849 tttgttggaatacctgatgctgtgaag 875 ||||||||||| ||||||||||||||| Sbjct: 541 tttgttggaattcctgatgctgtgaag 567 Score = 44.1 bits (22), Expect = 1.8 Identities = 37/42 (88%) Strand = Plus / Plus Query: 572 gccctgcaagttcttcctcgccggagactgcacctacggcga 613 ||||||||||||||||||| |||| || |||| |||||||| Sbjct: 333 gccctgcaagttcttcctctccggtgattgcaggtacggcga 374
>gb|AY109191.1| Zea mays PCO113137 mRNA sequence Length = 570 Score = 81.8 bits (41), Expect = 8e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 59 ctccgatccggatctccccatccattccggcgagccctcgccgcgtcgcttccacgcgac 118 |||||||||||||||||||| || ||||||||||| |||||||||||| |||||||||| Sbjct: 63 ctccgatccggatctccccacccgctccggcgagccatcgccgcgtcgcctccacgcgac 122 Query: 119 c 119 | Sbjct: 123 c 123 Score = 67.9 bits (34), Expect = 1e-07 Identities = 75/88 (85%), Gaps = 3/88 (3%) Strand = Plus / Plus Query: 208 ctcccgagcccaacaaaccctaggcgacgcc---catggacttcgaggccgacggccgct 264 |||||||||||| |||||||||| || |||| ||||||| | ||||||||||| || | Sbjct: 214 ctcccgagcccagcaaaccctagccgccgccacccatggacatagaggccgacggacgat 273 Query: 265 tcggcaacaagcgcgtgcacaaccgcct 292 |||||||||| || |||||||| ||||| Sbjct: 274 tcggcaacaaacgagtgcacaatcgcct 301 Score = 42.1 bits (21), Expect = 7.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 333 aaggtctgcatccattggcgcgctgggcgatgcaatcgcttcccctgccccttcctccac 392 |||||||||| | | ||||| || || || ||||| ||||| || ||||||||||||||| Sbjct: 342 aaggtctgcaactactggcgtgccggtcggtgcaaccgctttccgtgccccttcctccac 401 Query: 393 a 393 | Sbjct: 402 a 402
>emb|CR855158.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0147H17, complete sequence Length = 79528 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1197 tgctgggatcagtttctgttatcttgttctttggatcaaacaat 1240 ||||||||||| ||||| |||||||||||| ||||||||||||| Sbjct: 36645 tgctgggatcaatttctattatcttgttctctggatcaaacaat 36688 Score = 50.1 bits (25), Expect = 0.030 Identities = 28/29 (96%) Strand = Plus / Plus Query: 849 tttgttggaatacctgatgctgtgaaggt 877 ||||||||||| ||||||||||||||||| Sbjct: 35961 tttgttggaattcctgatgctgtgaaggt 35989 Score = 46.1 bits (23), Expect = 0.46 Identities = 35/39 (89%) Strand = Plus / Plus Query: 372 ttcccctgccccttcctccacagcgagctccctgaggcg 410 |||||||||| || |||||||||||| ||||| |||||| Sbjct: 35395 ttcccctgccgctacctccacagcgaactccccgaggcg 35433 Score = 44.1 bits (22), Expect = 1.8 Identities = 37/42 (88%) Strand = Plus / Plus Query: 572 gccctgcaagttcttcctcgccggagactgcacctacggcga 613 ||||||||||||||||||| |||| || |||| |||||||| Sbjct: 35535 gccctgcaagttcttcctctccggtgattgcaggtacggcga 35576 Score = 42.1 bits (21), Expect = 7.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1305 ggtgcacttgctcttactggcatgcctgatgcacaat 1341 ||||||||||||||| |||| |||| |||||||||| Sbjct: 37612 ggtgcacttgctcttgctggtatgcaagatgcacaat 37648
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1197 tgctgggatcagtttctgttatcttgttctttggatcaaacaat 1240 ||||||||||| ||||| |||||||||||| ||||||||||||| Sbjct: 28823917 tgctgggatcaatttctattatcttgttctctggatcaaacaat 28823960 Score = 50.1 bits (25), Expect = 0.030 Identities = 28/29 (96%) Strand = Plus / Plus Query: 849 tttgttggaatacctgatgctgtgaaggt 877 ||||||||||| ||||||||||||||||| Sbjct: 28823234 tttgttggaattcctgatgctgtgaaggt 28823262 Score = 46.1 bits (23), Expect = 0.46 Identities = 35/39 (89%) Strand = Plus / Plus Query: 372 ttcccctgccccttcctccacagcgagctccctgaggcg 410 |||||||||| || |||||||||||| ||||| |||||| Sbjct: 28822674 ttcccctgccgctacctccacagcgaactccccgaggcg 28822712 Score = 44.1 bits (22), Expect = 1.8 Identities = 37/42 (88%) Strand = Plus / Plus Query: 572 gccctgcaagttcttcctcgccggagactgcacctacggcga 613 ||||||||||||||||||| |||| || |||| |||||||| Sbjct: 28822808 gccctgcaagttcttcctctccggtgattgcaggtacggcga 28822849 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 ggaggaggggggcgcggcggcggcg 501 ||||||||||||| ||||||||||| Sbjct: 6460338 ggaggaggggggctcggcggcggcg 6460362 Score = 42.1 bits (21), Expect = 7.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1305 ggtgcacttgctcttactggcatgcctgatgcacaat 1341 ||||||||||||||| |||| |||| |||||||||| Sbjct: 28824884 ggtgcacttgctcttgctggtatgcaagatgcacaat 28824920
>emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04, complete sequence Length = 154865 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1197 tgctgggatcagtttctgttatcttgttctttggatcaaacaat 1240 ||||||||||| ||||| |||||||||||| ||||||||||||| Sbjct: 35979 tgctgggatcaatttctattatcttgttctctggatcaaacaat 36022 Score = 50.1 bits (25), Expect = 0.030 Identities = 28/29 (96%) Strand = Plus / Plus Query: 849 tttgttggaatacctgatgctgtgaaggt 877 ||||||||||| ||||||||||||||||| Sbjct: 35296 tttgttggaattcctgatgctgtgaaggt 35324 Score = 46.1 bits (23), Expect = 0.46 Identities = 35/39 (89%) Strand = Plus / Plus Query: 372 ttcccctgccccttcctccacagcgagctccctgaggcg 410 |||||||||| || |||||||||||| ||||| |||||| Sbjct: 34736 ttcccctgccgctacctccacagcgaactccccgaggcg 34774 Score = 44.1 bits (22), Expect = 1.8 Identities = 37/42 (88%) Strand = Plus / Plus Query: 572 gccctgcaagttcttcctcgccggagactgcacctacggcga 613 ||||||||||||||||||| |||| || |||| |||||||| Sbjct: 34870 gccctgcaagttcttcctctccggtgattgcaggtacggcga 34911 Score = 42.1 bits (21), Expect = 7.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1305 ggtgcacttgctcttactggcatgcctgatgcacaat 1341 ||||||||||||||| |||| |||| |||||||||| Sbjct: 36946 ggtgcacttgctcttgctggtatgcaagatgcacaat 36982
>gb|BT026122.1| Arabidopsis thaliana Length = 1293 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1248 tgggcagctacagaaagtggaaacttagaagtaacatatacacacaaaga 1297 ||||| ||||| ||| |||||||||||||||| |||||||| |||||||| Sbjct: 994 tgggctgctactgaaggtggaaacttagaagtgacatatactcacaaaga 1043
>ref|NM_118676.3| Arabidopsis thaliana ZFWD1; nucleic acid binding (ZFWD1) mRNA, complete cds Length = 1799 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1248 tgggcagctacagaaagtggaaacttagaagtaacatatacacacaaaga 1297 ||||| ||||| ||| |||||||||||||||| |||||||| |||||||| Sbjct: 1120 tgggctgctactgaaggtggaaacttagaagtgacatatactcacaaaga 1169
>emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 63 Length = 198777 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 1248 tgggcagctacagaaagtggaaacttagaagtaacatatacacacaaaga 1297 ||||| ||||| ||| |||||||||||||||| |||||||| |||||||| Sbjct: 89818 tgggctgctactgaaggtggaaacttagaagtgacatatactcacaaaga 89769
>emb|AL079350.1|ATT30C3 Arabidopsis thaliana DNA chromosome 4, BAC clone T30C3 (ESSA project) Length = 77793 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 1248 tgggcagctacagaaagtggaaacttagaagtaacatatacacacaaaga 1297 ||||| ||||| ||| |||||||||||||||| |||||||| |||||||| Sbjct: 56936 tgggctgctactgaaggtggaaacttagaagtgacatatactcacaaaga 56887
>emb|AL022197.2|ATM7J2 Arabidopsis thaliana DNA chromosome 4, P1 clone M7J2 (ESSA project) Length = 80386 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1248 tgggcagctacagaaagtggaaacttagaagtaacatatacacacaaaga 1297 ||||| ||||| ||| |||||||||||||||| |||||||| |||||||| Sbjct: 65000 tgggctgctactgaaggtggaaacttagaagtgacatatactcacaaaga 65049
>emb|BX827814.1|CNS0A4AK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH24ZB04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1769 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1248 tgggcagctacagaaagtggaaacttagaagtaacatatacacacaaaga 1297 ||||| ||||| ||| |||||||||||||||| |||||||| |||||||| Sbjct: 1122 tgggctgctactgaaggtggaaacttagaagtgacatatactcacaaaga 1171
>emb|AJ252063.1|ATH252063 Arabidopsis thaliana partial mRNA for zfwd1 protein (zfwd1 gene) Length = 1293 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1248 tgggcagctacagaaagtggaaacttagaagtaacatatacacacaaaga 1297 ||||| ||||| ||| |||||||||||||||| |||||||| |||||||| Sbjct: 994 tgggctgctactgaaggtggaaacttagaagtgacatatactcacaaaga 1043
>emb|BX828187.1|CNS0A3QV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZD07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1800 Score = 52.0 bits (26), Expect = 0.008 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1264 gtggaaacttagaagtaacatatacacacaaaga 1297 |||||||||||||||| |||||||| |||||||| Sbjct: 1130 gtggaaacttagaagtgacatatactcacaaaga 1163
>ref|NM_001071491.1| Oryza sativa (japonica cultivar-group) Os10g0497000 (Os10g0497000) mRNA, complete cds Length = 3406 Score = 50.1 bits (25), Expect = 0.030 Identities = 28/29 (96%) Strand = Plus / Plus Query: 477 ggaggaggggggcgcggcggcggcggtgg 505 |||||||||| |||||||||||||||||| Sbjct: 399 ggaggaggggagcgcggcggcggcggtgg 427
>ref|NM_001053806.1| Oryza sativa (japonica cultivar-group) Os02g0587000 (Os02g0587000) mRNA, complete cds Length = 775 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Plus Query: 485 ggggcgcggcggcggcggtggctac 509 ||||||||||||||||||||||||| Sbjct: 315 ggggcgcggcggcggcggtggctac 339
>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete sequence Length = 136120 Score = 50.1 bits (25), Expect = 0.030 Identities = 28/29 (96%) Strand = Plus / Minus Query: 477 ggaggaggggggcgcggcggcggcggtgg 505 |||||||||| |||||||||||||||||| Sbjct: 115753 ggaggaggggagcgcggcggcggcggtgg 115725
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 50.1 bits (25), Expect = 0.030 Identities = 28/29 (96%) Strand = Plus / Plus Query: 477 ggaggaggggggcgcggcggcggcggtgg 505 |||||||||| |||||||||||||||||| Sbjct: 18390940 ggaggaggggagcgcggcggcggcggtgg 18390968
>dbj|AP005644.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056I22 Length = 147728 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Plus Query: 485 ggggcgcggcggcggcggtggctac 509 ||||||||||||||||||||||||| Sbjct: 93924 ggggcgcggcggcggcggtggctac 93948
>dbj|AP005643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0046O12 Length = 128223 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Plus Query: 485 ggggcgcggcggcggcggtggctac 509 ||||||||||||||||||||||||| Sbjct: 4909 ggggcgcggcggcggcggtggctac 4933
>dbj|AK120408.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091M08, full insert sequence Length = 3407 Score = 50.1 bits (25), Expect = 0.030 Identities = 28/29 (96%) Strand = Plus / Plus Query: 477 ggaggaggggggcgcggcggcggcggtgg 505 |||||||||| |||||||||||||||||| Sbjct: 402 ggaggaggggagcgcggcggcggcggtgg 430
>dbj|AK062460.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-D05, full insert sequence Length = 775 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Plus Query: 485 ggggcgcggcggcggcggtggctac 509 ||||||||||||||||||||||||| Sbjct: 315 ggggcgcggcggcggcggtggctac 339
>ref|XR_009312.1| PREDICTED: Rattus norvegicus similar to pericentrin (LOC687681), mRNA Length = 9249 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1018 attgttttgagccagctgcttctc 1041 |||||||||||||||||||||||| Sbjct: 7131 attgttttgagccagctgcttctc 7108
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Plus Query: 484 gggggcgcggcggcggcggtggc 506 ||||||||||||||||||||||| Sbjct: 51289 gggggcgcggcggcggcggtggc 51311
>dbj|AK238548.1| Sus scrofa mRNA, clone:TES010065C05, expressed in testis Length = 1505 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 188 tcctcctctgcccgcgccgcct 209 |||||||||||||||||||||| Sbjct: 1167 tcctcctctgcccgcgccgcct 1188
>dbj|AK238475.1| Sus scrofa mRNA, clone:TES010035F02, expressed in testis Length = 1478 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 188 tcctcctctgcccgcgccgcct 209 |||||||||||||||||||||| Sbjct: 1136 tcctcctctgcccgcgccgcct 1157
>dbj|AK231814.1| Sus scrofa mRNA, clone:LNG010027B04, expressed in lung Length = 1207 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 188 tcctcctctgcccgcgccgcct 209 |||||||||||||||||||||| Sbjct: 862 tcctcctctgcccgcgccgcct 883
>ref|NM_001054775.1| Oryza sativa (japonica cultivar-group) Os02g0768700 (Os02g0768700) mRNA, complete cds Length = 855 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 477 ggaggaggggggcgcggcggcggcgg 502 |||||||| ||||||||||||||||| Sbjct: 150 ggaggaggcgggcgcggcggcggcgg 125
>ref|NM_001050192.1| Oryza sativa (japonica cultivar-group) Os01g0633500 (Os01g0633500) mRNA, partial cds Length = 1465 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 gcgacgcccatggacttcgaggccga 256 ||||||||||||||||||||| |||| Sbjct: 360 gcgacgcccatggacttcgagtccga 385
>ref|XM_001140090.1| PREDICTED: Pan troglodytes similar to mKIAA2014 protein, transcript variant 3 (LOC459663), mRNA Length = 5342 Score = 44.1 bits (22), Expect = 1.8 Identities = 28/30 (93%) Strand = Plus / Minus Query: 477 ggaggaggggggcgcggcggcggcggtggc 506 ||||||||||| ||||||||||||||||| Sbjct: 1823 ggaggagggggtggcggcggcggcggtggc 1794
>ref|XM_001139585.1| PREDICTED: Pan troglodytes similar to mKIAA2014 protein, transcript variant 1 (LOC459663), mRNA Length = 4365 Score = 44.1 bits (22), Expect = 1.8 Identities = 28/30 (93%) Strand = Plus / Minus Query: 477 ggaggaggggggcgcggcggcggcggtggc 506 ||||||||||| ||||||||||||||||| Sbjct: 1976 ggaggagggggtggcggcggcggcggtggc 1947
>ref|XM_001140431.1| PREDICTED: Pan troglodytes similar to mKIAA2014 protein, transcript variant 7 (LOC459663), mRNA Length = 5495 Score = 44.1 bits (22), Expect = 1.8 Identities = 28/30 (93%) Strand = Plus / Minus Query: 477 ggaggaggggggcgcggcggcggcggtggc 506 ||||||||||| ||||||||||||||||| Sbjct: 1976 ggaggagggggtggcggcggcggcggtggc 1947
>ref|XM_001140351.1| PREDICTED: Pan troglodytes similar to mKIAA2014 protein, transcript variant 6 (LOC459663), mRNA Length = 5456 Score = 44.1 bits (22), Expect = 1.8 Identities = 28/30 (93%) Strand = Plus / Minus Query: 477 ggaggaggggggcgcggcggcggcggtggc 506 ||||||||||| ||||||||||||||||| Sbjct: 2024 ggaggagggggtggcggcggcggcggtggc 1995
>ref|XM_001140177.1| PREDICTED: Pan troglodytes similar to mKIAA2014 protein, transcript variant 4 (LOC459663), mRNA Length = 5542 Score = 44.1 bits (22), Expect = 1.8 Identities = 28/30 (93%) Strand = Plus / Minus Query: 477 ggaggaggggggcgcggcggcggcggtggc 506 ||||||||||| ||||||||||||||||| Sbjct: 1976 ggaggagggggtggcggcggcggcggtggc 1947
>ref|XM_001139667.1| PREDICTED: Pan troglodytes similar to mKIAA2014 protein, transcript variant 2 (LOC459663), mRNA Length = 6605 Score = 44.1 bits (22), Expect = 1.8 Identities = 28/30 (93%) Strand = Plus / Minus Query: 477 ggaggaggggggcgcggcggcggcggtggc 506 ||||||||||| ||||||||||||||||| Sbjct: 2120 ggaggagggggtggcggcggcggcggtggc 2091
>ref|XM_515836.2| PREDICTED: Pan troglodytes similar to mKIAA2014 protein, transcript variant 8 (LOC459663), mRNA Length = 5639 Score = 44.1 bits (22), Expect = 1.8 Identities = 28/30 (93%) Strand = Plus / Minus Query: 477 ggaggaggggggcgcggcggcggcggtggc 506 ||||||||||| ||||||||||||||||| Sbjct: 2120 ggaggagggggtggcggcggcggcggtggc 2091
>ref|XR_011493.1| PREDICTED: Macaca mulatta similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 (LOC705752), mRNA Length = 2469 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 485 ggggcgcggcggcggcggtggc 506 |||||||||||||||||||||| Sbjct: 482 ggggcgcggcggcggcggtggc 503
>gb|AC165173.2| Zea mays clone ZMMBBb-125O19, complete sequence Length = 157660 Score = 44.1 bits (22), Expect = 1.8 Identities = 37/42 (88%) Strand = Plus / Minus Query: 1089 agactttactctggctcaatggataaaaccattagagtatgg 1130 |||||||||||||||||| |||| || ||||| | ||||||| Sbjct: 42975 agactttactctggctcactggacaagaccatcaaagtatgg 42934
>gb|AF101045.1| Oryza sativa (japonica cultivar-group) putative ADP-glucose pyrophosphorylase subunit SH2 and putative transcription factor X1, putative transcription factor X2 and putative NADPH-dependent reductase A1 genes, complete cds Length = 29877 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 gcgacgcccatggacttcgaggccga 256 ||||||||||||||||||||| |||| Sbjct: 27513 gcgacgcccatggacttcgagtccga 27538
>gb|U70541.1|OSU70541 Oryza sativa (indica cultivar-group) putative ADP-glucose pyrophosphorylase subunit SH2 and putative NADPH-dependent reductase A1 genes, complete cds Length = 30034 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 gcgacgcccatggacttcgaggccga 256 ||||||||||||||||||||| |||| Sbjct: 27277 gcgacgcccatggacttcgagtccga 27302
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 gcgacgcccatggacttcgaggccga 256 ||||||||||||||||||||| |||| Sbjct: 25379296 gcgacgcccatggacttcgagtccga 25379321
>emb|AL356107.21| Human DNA sequence from clone RP11-484D5 on chromosome 13 Contains the gene for a novel protein similar to transforming growth factor beta-stimulated protein (TSC-22), SMARCE1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 ) pseudogene and a CpG island, complete sequence Length = 140499 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 485 ggggcgcggcggcggcggtggc 506 |||||||||||||||||||||| Sbjct: 66189 ggggcgcggcggcggcggtggc 66210
>emb|AL034408.2|HS710L4 Human DNA sequence from clone RP4-710L4 on chromosome Xq11.2-12 Contains the 5' end of the MTMR8 gene for myotubularin related protein 8, a SHC (Src homology 2 domain containing) transforming protein 1 (SHC1) pseudogene and a CpG island, complete sequence Length = 129849 Score = 44.1 bits (22), Expect = 1.8 Identities = 28/30 (93%) Strand = Plus / Minus Query: 362 atgcaatcgcttcccctgccccttcctcca 391 |||| ||||||||||||||||| ||||||| Sbjct: 50725 atgctatcgcttcccctgccccctcctcca 50696
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 84 tccggcgagccctcgccgcgtc 105 |||||||||||||||||||||| Sbjct: 1360684 tccggcgagccctcgccgcgtc 1360705
>dbj|AP004317.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0663E10 Length = 162297 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 gcgacgcccatggacttcgaggccga 256 ||||||||||||||||||||| |||| Sbjct: 69296 gcgacgcccatggacttcgagtccga 69321
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 485 ggggcgcggcggcggcggtggc 506 |||||||||||||||||||||| Sbjct: 5618869 ggggcgcggcggcggcggtggc 5618890
>dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1767_D02 Length = 139145 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 477 ggaggaggggggcgcggcggcggcgg 502 |||||||| ||||||||||||||||| Sbjct: 61284 ggaggaggcgggcgcggcggcggcgg 61309
>dbj|AP004080.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1079_F11 Length = 122402 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 477 ggaggaggggggcgcggcggcggcgg 502 |||||||| ||||||||||||||||| Sbjct: 3164 ggaggaggcgggcgcggcggcggcgg 3189
>gb|AC018730.8| Homo sapiens BAC clone RP11-13J10 from 2, complete sequence Length = 154728 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 477 ggaggaggggggcgcggcggcggcgg 502 ||||| |||||||||||||||||||| Sbjct: 80565 ggaggcggggggcgcggcggcggcgg 80590
>emb|Y07956.1|OSDIHYFLA O.sativa mRNA for dihydroflavonol reductase Length = 1438 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 gcgacgcccatggacttcgaggccga 256 ||||||||||||||||||||| |||| Sbjct: 376 gcgacgcccatggacttcgagtccga 401
>dbj|AB003495.1| Oryza sativa (japonica cultivar-group) DNA for dihydroflavonol 4-reductase, complete cds Length = 3613 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 gcgacgcccatggacttcgaggccga 256 ||||||||||||||||||||| |||| Sbjct: 1250 gcgacgcccatggacttcgagtccga 1275
>gb|U87451.1|OSU87451 Oryza sativa NADPH-dependent reductase A1 gene, partial cds Length = 461 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 gcgacgcccatggacttcgaggccga 256 ||||||||||||||||||||| |||| Sbjct: 344 gcgacgcccatggacttcgagtccga 369
>emb|AL834396.1|HSM805480 Homo sapiens mRNA; cDNA DKFZp761P0824 (from clone DKFZp761P0824) Length = 4969 Score = 44.1 bits (22), Expect = 1.8 Identities = 28/30 (93%) Strand = Plus / Minus Query: 477 ggaggaggggggcgcggcggcggcggtggc 506 ||||||||||| ||||||||||||||||| Sbjct: 1433 ggaggagggggtggcggcggcggcggtggc 1404
>dbj|AB067489.1| Homo sapiens mRNA for KIAA1902 protein, partial cds Length = 5344 Score = 44.1 bits (22), Expect = 1.8 Identities = 28/30 (93%) Strand = Plus / Minus Query: 477 ggaggaggggggcgcggcggcggcggtggc 506 ||||||||||| ||||||||||||||||| Sbjct: 1820 ggaggagggggtggcggcggcggcggtggc 1791
>dbj|AB003496.1| Oryza sativa (japonica cultivar-group) mRNA for dihydroflavonol 4-reductase, complete cds Length = 1480 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 gcgacgcccatggacttcgaggccga 256 ||||||||||||||||||||| |||| Sbjct: 360 gcgacgcccatggacttcgagtccga 385
>emb|CT832612.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA205O19, full insert sequence Length = 1850 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 478 gaggaggggggcgcggcggcggcgg 502 |||||||||| |||||||||||||| Sbjct: 99 gaggagggggacgcggcggcggcgg 75
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 476 aggaggaggggggcgcggcggcggc 500 |||||||||| |||||||||||||| Sbjct: 7669063 aggaggagggcggcgcggcggcggc 7669039
>ref|NM_001068417.1| Oryza sativa (japonica cultivar-group) Os08g0435700 (Os08g0435700) mRNA, complete cds Length = 1110 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 486 gggcgcggcggcggcggtggc 506 ||||||||||||||||||||| Sbjct: 787 gggcgcggcggcggcggtggc 807
>ref|NM_001062846.1| Oryza sativa (japonica cultivar-group) Os05g0560900 (Os05g0560900) mRNA, complete cds Length = 1636 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 486 gggcgcggcggcggcggtggc 506 ||||||||||||||||||||| Sbjct: 238 gggcgcggcggcggcggtggc 258
>ref|NM_001058747.1| Oryza sativa (japonica cultivar-group) Os04g0194600 (Os04g0194600) mRNA, partial cds Length = 820 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 477 ggaggaggggggcgcggcggcggcg 501 ||||||||||||| ||||||||||| Sbjct: 108 ggaggaggggggctcggcggcggcg 84
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 cgacggccgcttcggcaacaa 274 ||||||||||||||||||||| Sbjct: 7525497 cgacggccgcttcggcaacaa 7525517
>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06, complete sequence Length = 139139 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 486 gggcgcggcggcggcggtggc 506 ||||||||||||||||||||| Sbjct: 56919 gggcgcggcggcggcggtggc 56899
>ref|XM_501031.1| Yarrowia lipolytica CLIB122, YALI0B17798g predicted mRNA Length = 1875 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 869 tgtgaaggtttggaatatgca 889 ||||||||||||||||||||| Sbjct: 846 tgtgaaggtttggaatatgca 866
>gb|AC091728.2| Bos taurus clone RP42-99M11, complete sequence Length = 162743 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1851 aatataaagatttgatttttg 1871 ||||||||||||||||||||| Sbjct: 91907 aatataaagatttgatttttg 91927
>gb|BC068608.1| Homo sapiens cDNA clone IMAGE:5296989, with apparent retained intron Length = 2765 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 487 ggcgcggcggcggcggtggct 507 ||||||||||||||||||||| Sbjct: 44 ggcgcggcggcggcggtggct 64
>gb|AY313762.1| Limnonectes sp. 1 BJE-2003 specimen_voucher A167169 tRNA-Phe gene, partial sequence; 12S ribosomal RNA and tRNA-Val genes, complete sequence; and 16S ribosomal RNA gene, partial sequence; mitochondrial genes for mitochondrial products Length = 2411 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1845 tgtattaatataaagatttga 1865 ||||||||||||||||||||| Sbjct: 1422 tgtattaatataaagatttga 1402
>gb|AY313704.1| Limnonectes cf. magnus BJE-2003 specimen_voucher USNM534311 tRNA-Phe gene, partial sequence; 12S ribosomal RNA and tRNA-Val genes, complete sequence; and 16S ribosomal RNA gene, partial sequence; mitochondrial genes for mitochondrial products Length = 2420 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1845 tgtattaatataaagatttga 1865 ||||||||||||||||||||| Sbjct: 1432 tgtattaatataaagatttga 1412
>gb|AY358371.1| Homo sapiens clone DNA90842 CRIM1 (UNQ1886) mRNA, complete cds Length = 3671 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 487 ggcgcggcggcggcggtggct 507 ||||||||||||||||||||| Sbjct: 52 ggcgcggcggcggcggtggct 32
>ref|XM_460148.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E20493g) partial mRNA Length = 3849 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1261 aaagtggaaacttagaagtaa 1281 ||||||||||||||||||||| Sbjct: 2584 aaagtggaaacttagaagtaa 2564
>gb|AC096640.2| Homo sapiens chromosome 1 clone RP11-332J14, complete sequence Length = 167346 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 487 ggcgcggcggcggcggtggct 507 ||||||||||||||||||||| Sbjct: 69511 ggcgcggcggcggcggtggct 69531
>gb|AC026441.5| Homo sapiens chromosome 5 clone CTD-2280O3, complete sequence Length = 112533 Score = 42.1 bits (21), Expect = 7.2 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 1844 atgtattaatataa-agatttgatttttg 1871 |||||||||||||| |||||||||||||| Sbjct: 48630 atgtattaatataatagatttgatttttg 48658
>gb|AC104662.3| Homo sapiens BAC clone RP11-660M5 from 4, complete sequence Length = 122457 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1022 ttttgagccagctgcttctcttacc 1046 ||||||||||||| ||||||||||| Sbjct: 10443 ttttgagccagcttcttctcttacc 10467
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 304 ccggtgccgcctcttcgtcttcctc 328 |||||||||||||||| |||||||| Sbjct: 20441702 ccggtgccgcctcttcttcttcctc 20441678 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 477 ggaggaggggggcgcggcggcggcggtgg 505 ||||||||||| ||||||||||| ||||| Sbjct: 21243043 ggaggagggggacgcggcggcggaggtgg 21243071
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 486 gggcgcggcggcggcggtggc 506 ||||||||||||||||||||| Sbjct: 21150211 gggcgcggcggcggcggtggc 21150231
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 490 gcggcggcggcggtggctaca 510 ||||||||||||||||||||| Sbjct: 11113393 gcggcggcggcggtggctaca 11113413 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 491 cggcggcggcggtggctacaa 511 ||||||||||||||||||||| Sbjct: 24522549 cggcggcggcggtggctacaa 24522529
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 486 gggcgcggcggcggcggtggc 506 ||||||||||||||||||||| Sbjct: 27692361 gggcgcggcggcggcggtggc 27692341
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 478 gaggaggggggcgcggcggcggcgg 502 |||||||||| |||||||||||||| Sbjct: 10141995 gaggagggggacgcggcggcggcgg 10141971
>emb|AL442636.3| Human DNA sequence from clone RP11-322F18 on chromosome 13 Contains a CpG island, complete sequence Length = 165618 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1840 aaggatgtattaatataaaga 1860 ||||||||||||||||||||| Sbjct: 150021 aaggatgtattaatataaaga 150041
>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0078C05, complete sequence Length = 122116 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 478 gaggaggggggcgcggcggcggcgg 502 |||||||||| |||||||||||||| Sbjct: 89495 gaggagggggacgcggcggcggcgg 89471
>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045E22, from chromosome 3, complete sequence Length = 160920 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 478 gaggaggggggcgcggcggcggcgg 502 |||||||||| |||||||||||||| Sbjct: 5307 gaggagggggacgcggcggcggcgg 5283
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1261 aaagtggaaacttagaagtaa 1281 ||||||||||||||||||||| Sbjct: 1618758 aaagtggaaacttagaagtaa 1618778
>emb|AL607008.2|OSJN00119 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026E15, complete sequence Length = 137874 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 ggaggaggggggcgcggcggcggcg 501 ||||||||||||| ||||||||||| Sbjct: 14586 ggaggaggggggctcggcggcggcg 14610
>emb|AJ223579.1|BRL223579 Branchiostoma lanceolatum mRNA for intermediate filament protein D1 Length = 2745 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 490 gcggcggcggcggtggctaca 510 ||||||||||||||||||||| Sbjct: 170 gcggcggcggcggtggctaca 190
>gb|AC022203.4|AC022203 Homo sapiens BAC clone RP11-490K15 from 13, complete sequence Length = 177088 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1840 aaggatgtattaatataaaga 1860 ||||||||||||||||||||| Sbjct: 105466 aaggatgtattaatataaaga 105446
>gb|AC008115.4| Homo sapiens 12 BAC RP11-180M15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 157892 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 707 actgcctgctgggtcagacaa 727 ||||||||||||||||||||| Sbjct: 70393 actgcctgctgggtcagacaa 70373
>dbj|AP004268.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0045F02 Length = 143668 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 490 gcggcggcggcggtggctaca 510 ||||||||||||||||||||| Sbjct: 95912 gcggcggcggcggtggctaca 95932
>gb|AC009414.4| Homo sapiens BAC clone RP11-490M8 from 2, complete sequence Length = 137557 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 487 ggcgcggcggcggcggtggct 507 ||||||||||||||||||||| Sbjct: 7539 ggcgcggcggcggcggtggct 7559
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 490 gcggcggcggcggtggctacaacaa 514 ||||||||||||||||| ||||||| Sbjct: 2769924 gcggcggcggcggtggcaacaacaa 2769900
>dbj|AP004230.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ2013_G04 Length = 73667 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 491 cggcggcggcggtggctacaa 511 ||||||||||||||||||||| Sbjct: 72359 cggcggcggcggtggctacaa 72339
>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0026E05 Length = 159860 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 477 ggaggaggggggcgcggcggcggcggtgg 505 ||||||||| | ||||||||||||||||| Sbjct: 92024 ggaggagggagccgcggcggcggcggtgg 91996
>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0413H11 Length = 147655 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 486 gggcgcggcggcggcggtggc 506 ||||||||||||||||||||| Sbjct: 121421 gggcgcggcggcggcggtggc 121441
>dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018H10 Length = 135879 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 491 cggcggcggcggtggctacaa 511 ||||||||||||||||||||| Sbjct: 15843 cggcggcggcggtggctacaa 15823
>dbj|AK101758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033063M08, full insert sequence Length = 1637 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 486 gggcgcggcggcggcggtggc 506 ||||||||||||||||||||| Sbjct: 239 gggcgcggcggcggcggtggc 259
>dbj|AK100180.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030B07, full insert sequence Length = 4695 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 477 ggaggaggggggcgcggcggcggcg 501 ||||||||||||| ||||||||||| Sbjct: 101 ggaggaggggggctcggcggcggcg 77
>gb|AC016648.5|AC016648 Homo sapiens chromosome 5 clone RPCI-1_137K24, complete sequence Length = 123946 Score = 42.1 bits (21), Expect = 7.2 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 1844 atgtattaatataa-agatttgatttttg 1871 |||||||||||||| |||||||||||||| Sbjct: 81974 atgtattaatataatagatttgatttttg 81946
>dbj|AK063973.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-B08, full insert sequence Length = 1637 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 486 gggcgcggcggcggcggtggc 506 ||||||||||||||||||||| Sbjct: 240 gggcgcggcggcggcggtggc 260
>gb|AC164420.4| Mus musculus chromosome 8, clone RP24-388L13, complete sequence Length = 174120 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 736 ctgggagtaaggatggaacgg 756 ||||||||||||||||||||| Sbjct: 50740 ctgggagtaaggatggaacgg 50720
>gb|AC016950.8|AC016950 Homo sapiens 3 BAC RP11-239I11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159217 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1281 acatatacacacaaagaggagaatg 1305 ||||| ||||||||||||||||||| Sbjct: 132064 acatagacacacaaagaggagaatg 132040
>emb|AJ322640.1|HSA322640 Homo sapiens genomic sequence surrounding NotI site, clone NL1-AF15C Length = 631 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 487 ggcgcggcggcggcggtggct 507 ||||||||||||||||||||| Sbjct: 83 ggcgcggcggcggcggtggct 103
>gb|AY103714.1| Zea mays PCO156020 mRNA sequence Length = 591 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 cggcggcggtggctacaacaa 514 ||||||||||||||||||||| Sbjct: 288 cggcggcggtggctacaacaa 308
>gb|AC140446.5| Mus musculus BAC clone RP24-114J11 from chromosome 8, complete sequence Length = 152392 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 736 ctgggagtaaggatggaacgg 756 ||||||||||||||||||||| Sbjct: 119022 ctgggagtaaggatggaacgg 119002
>emb|AL662965.3|OSJN00167 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0040D17, complete sequence Length = 147548 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 ggaggaggggggcgcggcggcggcg 501 ||||||||||||| ||||||||||| Sbjct: 122487 ggaggaggggggctcggcggcggcg 122511
>emb|AL713932.4|CNS07YPD Oryza sativa chromosome 12, . BAC OSJNBb0094E08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137571 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 477 ggaggaggggggcgcggcggcggcggtgg 505 ||||||||||| ||||||||||| ||||| Sbjct: 47157 ggaggagggggacgcggcggcggaggtgg 47129
>emb|BX000456.3|CNS08CDD Oryza sativa chromosome 12, . BAC OSJNBa0050D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 185820 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 304 ccggtgccgcctcttcgtcttcctc 328 |||||||||||||||| |||||||| Sbjct: 69999 ccggtgccgcctcttcttcttcctc 70023
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 869 tgtgaaggtttggaatatgca 889 ||||||||||||||||||||| Sbjct: 2327119 tgtgaaggtttggaatatgca 2327099
>dbj|D87260.1| Oryza sativa (japonica cultivar-group) mRNA for PCF1, complete cds Length = 842 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 477 ggaggaggggggcgcggcggcggcg 501 ||||||||||||| ||||||||||| Sbjct: 127 ggaggaggggggctcggcggcggcg 103
>ref|NM_018650.2| Homo sapiens MAP/microtubule affinity-regulating kinase 1 (MARK1), mRNA dbj|AB040910.1| Homo sapiens mRNA for KIAA1477 protein, partial cds Length = 4638 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 487 ggcgcggcggcggcggtggct 507 ||||||||||||||||||||| Sbjct: 1 ggcgcggcggcggcggtggct 21
>gb|M30645.1|STMACM S.globisporus N-acetylmuramidase M1 (acm) gene, complete cds Length = 1155 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 485 ggggcgcggcggcggcggtgg 505 ||||||||||||||||||||| Sbjct: 292 ggggcgcggcggcggcggtgg 272 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 335,409,804 Number of extensions: 18462017 Number of successful extensions: 411171 Number of sequences better than 10.0: 114 Number of HSP's gapped: 411154 Number of HSP's successfully gapped: 182 Length of query: 1894 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1871 Effective length of database: 18,503,978,556 Effective search space: 34620943878276 Effective search space used: 34620943878276 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
