ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf163l14 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001065524.1| Oryza sativa (japonica cultivar-group) Os07g0170100 (Os07g0170100) mRNA, complete cds Length = 1383 Score = 1003 bits (506), Expect = 0.0 Identities = 854/970 (88%) Strand = Plus / Plus Query: 285 ggtgaacctcttcaccgccgtcaaccaggcgctccacatcgcgctcgacaccgacccgcg 344 ||||||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 250 ggtgaacctgttcacggccatcaaccaggcgctccacatcgccctcgacaccgacccgcg 309 Query: 345 ctcttacgtctttggagaggatgtgggtttcggcggcgtcttccgctgcacgacagggct 404 |||||| ||||| || || |||||||||||||| || |||||||||||||| |||||||| Sbjct: 310 ctcttatgtcttcggggaagatgtgggtttcggtggtgtcttccgctgcacaacagggct 369 Query: 405 agccgaacgattcgggaaacagagagtattcaatacgccattgtgtgaacagggtattgc 464 || || || || || | | ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 370 cgctgatcggtttggcaggaatagagttttcaatacgccgttgtgtgaacagggaattgc 429 Query: 465 cggatttgctattggcttagcagcaatggacaatagagctattgctgaaatccagtttgc 524 |||||||| |||| |||||||||||| ||||||||||||||||| |||||||| || Sbjct: 430 tggatttgccgttggtctagcagcaatgggtaatagagctattgctgagatccagttcgc 489 Query: 525 agattatatctttccagcatttgatcagattgtcaacgaagccgctaaattcagataccg 584 |||||||||||||||||| |||||||||||||| || ||||| |||||||| |||||||| Sbjct: 490 agattatatctttccagcttttgatcagattgttaatgaagcagctaaatttagataccg 549 Query: 585 aagtggaaatgaatttaactgtggaggtttaacaattcgatctccatatggtgctgttgg 644 |||||||||||||||||||||||||| ||||| |||||||| || ||||| ||||| || Sbjct: 550 gagtggaaatgaatttaactgtggaggattaacgattcgatcaccttatggcgctgtcgg 609 Query: 645 acatggtggtcactaccattcacagtcaccagaggctttcttctgccatgttcctggcct 704 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| || Sbjct: 610 tcatggtggtcactaccattcacagtcaccagaggctttcttttgtcatgttcctggact 669 Query: 705 gaaggttgtcatacctcggagtccacgtgaggccaagggactgttgctggccagcattcg 764 ||||| |||||||||| ||||||||||| ||||||||| ||||| |||| |||||| | Sbjct: 670 caaggtaatcatacctcgaagtccacgtgaagccaagggattgttgttggcaagcattag 729 Query: 765 tgacccaaacccagtcatctttttcgagccaaagtggctgtaccgtttggctgttgaaga 824 |||||||| |||||| | ||||| |||||||||||| |||||||||||||||||||||| Sbjct: 730 agacccaaatccagtcgtattttttgagccaaagtggttgtaccgtttggctgttgaaga 789 Query: 825 agttcctgagggggactatatgctgcctttatcccaggcggaagtgatccgcaaaggaag 884 |||||| |||| ||| ||||||||||| || || |||| || ||||| || |||||||| Sbjct: 790 agttccagaggaggattatatgctgcccttgtctgaggcagaggtgattcgtaaaggaag 849 Query: 885 tgatataacacttgttggttggggagctcaacttgcagtgttggcacaagcatgtgaaga 944 |||||||||||| ||||||||||||||||||||||||| ||| | ||||||| ||||| Sbjct: 850 tgatataacactaattggttggggagctcaacttgcagtactggaagaagcatgcgaaga 909 Query: 945 tgcttcaaaggatggaatttcttgcgagctcatagatctaagaacgctaattccatggga 1004 ||| ||||||||||||| ||||| |||||||||||||||||||| || ||||||||||| Sbjct: 910 tgcagcaaaggatggaatatcttgtgagctcatagatctaagaacactgattccatggga 969 Query: 1005 caaggaaacagtcgaggcctctgtcagcaagaccggaaagcttcttgttagtcatgaggc 1064 ||| |||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||| Sbjct: 970 caaagaaacagtagaggcctctgtcagcaagacaggaaaacttcttgttagccatgaggc 1029 Query: 1065 cccagtcacaggagggtttggtgcagaaatcgctgcatccattgctgagcgctgcttcca 1124 ||| |||| |||||||||||||||||||| || |||||||| | |||||||||||||| Sbjct: 1030 tccaatcaccggagggtttggtgcagaaattgccgcatccatcaccgagcgctgcttcca 1089 Query: 1125 gaggttagaagcgcctgtcgcgagggtctgcggcctcgacacccctttcccacttgttta 1184 |||||||||||||| ||||| || || |||||||| ||||| |||||||| |||||||| Sbjct: 1090 aaggttagaagcgcccgtcgcaagagtatgcggcctggacactcctttccctcttgttta 1149 Query: 1185 tgaacaattctacatgcccacaaagaacaagatcgtggatgctattaaagcaactgtaaa 1244 |||| ||| ||||||||||||||||||||| || |||| ||||| |||||||||||||| Sbjct: 1150 tgaaacattttacatgcccacaaagaacaaggtcctggacgctatcaaagcaactgtaaa 1209 Query: 1245 ttactgaggt 1254 |||||||||| Sbjct: 1210 ttactgaggt 1219
>dbj|AK105761.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-D07, full insert sequence Length = 1383 Score = 1003 bits (506), Expect = 0.0 Identities = 854/970 (88%) Strand = Plus / Plus Query: 285 ggtgaacctcttcaccgccgtcaaccaggcgctccacatcgcgctcgacaccgacccgcg 344 ||||||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 250 ggtgaacctgttcacggccatcaaccaggcgctccacatcgccctcgacaccgacccgcg 309 Query: 345 ctcttacgtctttggagaggatgtgggtttcggcggcgtcttccgctgcacgacagggct 404 |||||| ||||| || || |||||||||||||| || |||||||||||||| |||||||| Sbjct: 310 ctcttatgtcttcggggaagatgtgggtttcggtggtgtcttccgctgcacaacagggct 369 Query: 405 agccgaacgattcgggaaacagagagtattcaatacgccattgtgtgaacagggtattgc 464 || || || || || | | ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 370 cgctgatcggtttggcaggaatagagttttcaatacgccgttgtgtgaacagggaattgc 429 Query: 465 cggatttgctattggcttagcagcaatggacaatagagctattgctgaaatccagtttgc 524 |||||||| |||| |||||||||||| ||||||||||||||||| |||||||| || Sbjct: 430 tggatttgccgttggtctagcagcaatgggtaatagagctattgctgagatccagttcgc 489 Query: 525 agattatatctttccagcatttgatcagattgtcaacgaagccgctaaattcagataccg 584 |||||||||||||||||| |||||||||||||| || ||||| |||||||| |||||||| Sbjct: 490 agattatatctttccagcttttgatcagattgttaatgaagcagctaaatttagataccg 549 Query: 585 aagtggaaatgaatttaactgtggaggtttaacaattcgatctccatatggtgctgttgg 644 |||||||||||||||||||||||||| ||||| |||||||| || ||||| ||||| || Sbjct: 550 gagtggaaatgaatttaactgtggaggattaacgattcgatcaccttatggcgctgtcgg 609 Query: 645 acatggtggtcactaccattcacagtcaccagaggctttcttctgccatgttcctggcct 704 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| || Sbjct: 610 tcatggtggtcactaccattcacagtcaccagaggctttcttttgtcatgttcctggact 669 Query: 705 gaaggttgtcatacctcggagtccacgtgaggccaagggactgttgctggccagcattcg 764 ||||| |||||||||| ||||||||||| ||||||||| ||||| |||| |||||| | Sbjct: 670 caaggtaatcatacctcgaagtccacgtgaagccaagggattgttgttggcaagcattag 729 Query: 765 tgacccaaacccagtcatctttttcgagccaaagtggctgtaccgtttggctgttgaaga 824 |||||||| |||||| | ||||| |||||||||||| |||||||||||||||||||||| Sbjct: 730 agacccaaatccagtcgtattttttgagccaaagtggttgtaccgtttggctgttgaaga 789 Query: 825 agttcctgagggggactatatgctgcctttatcccaggcggaagtgatccgcaaaggaag 884 |||||| |||| ||| ||||||||||| || || |||| || ||||| || |||||||| Sbjct: 790 agttccagaggaggattatatgctgcccttgtctgaggcagaggtgattcgtaaaggaag 849 Query: 885 tgatataacacttgttggttggggagctcaacttgcagtgttggcacaagcatgtgaaga 944 |||||||||||| ||||||||||||||||||||||||| ||| | ||||||| ||||| Sbjct: 850 tgatataacactaattggttggggagctcaacttgcagtactggaagaagcatgcgaaga 909 Query: 945 tgcttcaaaggatggaatttcttgcgagctcatagatctaagaacgctaattccatggga 1004 ||| ||||||||||||| ||||| |||||||||||||||||||| || ||||||||||| Sbjct: 910 tgcagcaaaggatggaatatcttgtgagctcatagatctaagaacactgattccatggga 969 Query: 1005 caaggaaacagtcgaggcctctgtcagcaagaccggaaagcttcttgttagtcatgaggc 1064 ||| |||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||| Sbjct: 970 caaagaaacagtagaggcctctgtcagcaagacaggaaaacttcttgttagccatgaggc 1029 Query: 1065 cccagtcacaggagggtttggtgcagaaatcgctgcatccattgctgagcgctgcttcca 1124 ||| |||| |||||||||||||||||||| || |||||||| | |||||||||||||| Sbjct: 1030 tccaatcaccggagggtttggtgcagaaattgccgcatccatcaccgagcgctgcttcca 1089 Query: 1125 gaggttagaagcgcctgtcgcgagggtctgcggcctcgacacccctttcccacttgttta 1184 |||||||||||||| ||||| || || |||||||| ||||| |||||||| |||||||| Sbjct: 1090 aaggttagaagcgcccgtcgcaagagtatgcggcctggacactcctttccctcttgttta 1149 Query: 1185 tgaacaattctacatgcccacaaagaacaagatcgtggatgctattaaagcaactgtaaa 1244 |||| ||| ||||||||||||||||||||| || |||| ||||| |||||||||||||| Sbjct: 1150 tgaaacattttacatgcccacaaagaacaaggtcctggacgctatcaaagcaactgtaaa 1209 Query: 1245 ttactgaggt 1254 |||||||||| Sbjct: 1210 ttactgaggt 1219
>dbj|AK102495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095A19, full insert sequence Length = 1310 Score = 1003 bits (506), Expect = 0.0 Identities = 854/970 (88%) Strand = Plus / Plus Query: 285 ggtgaacctcttcaccgccgtcaaccaggcgctccacatcgcgctcgacaccgacccgcg 344 ||||||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 192 ggtgaacctgttcacggccatcaaccaggcgctccacatcgccctcgacaccgacccgcg 251 Query: 345 ctcttacgtctttggagaggatgtgggtttcggcggcgtcttccgctgcacgacagggct 404 |||||| ||||| || || |||||||||||||| || |||||||||||||| |||||||| Sbjct: 252 ctcttatgtcttcggggaagatgtgggtttcggtggtgtcttccgctgcacaacagggct 311 Query: 405 agccgaacgattcgggaaacagagagtattcaatacgccattgtgtgaacagggtattgc 464 || || || || || | | ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 312 cgctgatcggtttggcaggaatagagttttcaatacgccgttgtgtgaacagggaattgc 371 Query: 465 cggatttgctattggcttagcagcaatggacaatagagctattgctgaaatccagtttgc 524 |||||||| |||| |||||||||||| ||||||||||||||||| |||||||| || Sbjct: 372 tggatttgccgttggtctagcagcaatgggtaatagagctattgctgagatccagttcgc 431 Query: 525 agattatatctttccagcatttgatcagattgtcaacgaagccgctaaattcagataccg 584 |||||||||||||||||| |||||||||||||| || ||||| |||||||| |||||||| Sbjct: 432 agattatatctttccagcttttgatcagattgttaatgaagcagctaaatttagataccg 491 Query: 585 aagtggaaatgaatttaactgtggaggtttaacaattcgatctccatatggtgctgttgg 644 |||||||||||||||||||||||||| ||||| |||||||| || ||||| ||||| || Sbjct: 492 gagtggaaatgaatttaactgtggaggattaacgattcgatcaccttatggcgctgtcgg 551 Query: 645 acatggtggtcactaccattcacagtcaccagaggctttcttctgccatgttcctggcct 704 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| || Sbjct: 552 tcatggtggtcactaccattcacagtcaccagaggctttcttttgtcatgttcctggact 611 Query: 705 gaaggttgtcatacctcggagtccacgtgaggccaagggactgttgctggccagcattcg 764 ||||| |||||||||| ||||||||||| ||||||||| ||||| |||| |||||| | Sbjct: 612 caaggtaatcatacctcgaagtccacgtgaagccaagggattgttgttggcaagcattag 671 Query: 765 tgacccaaacccagtcatctttttcgagccaaagtggctgtaccgtttggctgttgaaga 824 |||||||| |||||| | ||||| |||||||||||| |||||||||||||||||||||| Sbjct: 672 agacccaaatccagtcgtattttttgagccaaagtggttgtaccgtttggctgttgaaga 731 Query: 825 agttcctgagggggactatatgctgcctttatcccaggcggaagtgatccgcaaaggaag 884 |||||| |||| ||| ||||||||||| || || |||| || ||||| || |||||||| Sbjct: 732 agttccagaggaggattatatgctgcccttgtctgaggcagaggtgattcgtaaaggaag 791 Query: 885 tgatataacacttgttggttggggagctcaacttgcagtgttggcacaagcatgtgaaga 944 |||||||||||| ||||||||||||||||||||||||| ||| | ||||||| ||||| Sbjct: 792 tgatataacactaattggttggggagctcaacttgcagtactggaagaagcatgcgaaga 851 Query: 945 tgcttcaaaggatggaatttcttgcgagctcatagatctaagaacgctaattccatggga 1004 ||| ||||||||||||| ||||| |||||||||||||||||||| || ||||||||||| Sbjct: 852 tgcagcaaaggatggaatatcttgtgagctcatagatctaagaacactgattccatggga 911 Query: 1005 caaggaaacagtcgaggcctctgtcagcaagaccggaaagcttcttgttagtcatgaggc 1064 ||| |||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||| Sbjct: 912 caaagaaacagtagaggcctctgtcagcaagacaggaaaacttcttgttagccatgaggc 971 Query: 1065 cccagtcacaggagggtttggtgcagaaatcgctgcatccattgctgagcgctgcttcca 1124 ||| |||| |||||||||||||||||||| || |||||||| | |||||||||||||| Sbjct: 972 tccaatcaccggagggtttggtgcagaaattgccgcatccatcaccgagcgctgcttcca 1031 Query: 1125 gaggttagaagcgcctgtcgcgagggtctgcggcctcgacacccctttcccacttgttta 1184 |||||||||||||| ||||| || || |||||||| ||||| |||||||| |||||||| Sbjct: 1032 aaggttagaagcgcccgtcgcaagagtatgcggcctggacactcctttccctcttgttta 1091 Query: 1185 tgaacaattctacatgcccacaaagaacaagatcgtggatgctattaaagcaactgtaaa 1244 |||| ||| ||||||||||||||||||||| || |||| ||||| |||||||||||||| Sbjct: 1092 tgaaacattttacatgcccacaaagaacaaggtcctggacgctatcaaagcaactgtaaa 1151 Query: 1245 ttactgaggt 1254 |||||||||| Sbjct: 1152 ttactgaggt 1161
>gb|AY106191.1| Zea mays PCO118301 mRNA sequence Length = 774 Score = 595 bits (300), Expect = e-166 Identities = 579/672 (86%) Strand = Plus / Plus Query: 544 tttgatcagattgtcaacgaagccgctaaattcagataccgaagtggaaatgaatttaac 603 ||||||||||||||||| ||||| ||||| |||||||| || |||||||||||||||||| Sbjct: 13 tttgatcagattgtcaatgaagcagctaagttcagatatcggagtggaaatgaatttaac 72 Query: 604 tgtggaggtttaacaattcgatctccatatggtgctgttggacatggtggtcactaccat 663 |||||||| ||||| |||||| |||| |||||||||||||| ||||||||||| |||||| Sbjct: 73 tgtggaggcttaacgattcgaactccctatggtgctgttgggcatggtggtcattaccat 132 Query: 664 tcacagtcaccagaggctttcttctgccatgttcctggcctgaaggttgtcatacctcgg 723 |||||||||||||||||||||||||| || |||||||| || |||||||||||||| ||| Sbjct: 133 tcacagtcaccagaggctttcttctgtcacgttcctggactcaaggttgtcataccacgg 192 Query: 724 agtccacgtgaggccaagggactgttgctggccagcattcgtgacccaaacccagtcatc 783 |||||||| ||||| ||||| || || |||||||||| || || ||||||||||| || Sbjct: 193 agtccacgcgaggctaaggggttgctgttggccagcatccgagatccaaacccagttata 252 Query: 784 tttttcgagccaaagtggctgtaccgtttggctgttgaagaagttcctgagggggactat 843 ||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||| || Sbjct: 253 ttttttgagccaaagtggctgtatcgtttggctgttgaagaagttcctgaggaggattac 312 Query: 844 atgctgcctttatcccaggcggaagtgatccgcaaaggaagtgatataacacttgttggt 903 |||||||| |||||| |||| |||||||| | ||||||||||||||||||||||||| Sbjct: 313 atgctgccattatccgaggcagaagtgattagggaaggaagtgatataacacttgttgga 372 Query: 904 tggggagctcaacttgcagtgttggcacaagcatgtgaagatgcttcaaaggatggaatt 963 ||||||||||| ||||| ||| || | |||| |||||||||||| |||||||||| | Sbjct: 373 tggggagctcagcttgcggtgctgaaagaagcctgtgaagatgctgcaaaggatggggtg 432 Query: 964 tcttgcgagctcatagatctaagaacgctaattccatgggacaaggaaacagtcgaggcc 1023 |||||||||||||| ||||| | ||| || | ||||||||||||||||| || |||||| Sbjct: 433 tcttgcgagctcatcgatctgaaaacactcgtaccatgggacaaggaaacggtagaggcc 492 Query: 1024 tctgtcagcaagaccggaaagcttcttgttagtcatgaggccccagtcacaggagggttt 1083 || || | |||||||| ||||| || ||||| || ||||| |||||||| || || || Sbjct: 493 tcggtgaagaagaccgggaagctcctcgttagccacgaggctccagtcaccgggggcttc 552 Query: 1084 ggtgcagaaatcgctgcatccattgctgagcgctgcttccagaggttagaagcgcctgtc 1143 || || || ||||| || |||||||| |||||||||||||||||||||||||| || || Sbjct: 553 ggcgcggagatcgccgcgtccattgccgagcgctgcttccagaggttagaagcacccgtg 612 Query: 1144 gcgagggtctgcggcctcgacacccctttcccacttgtttatgaacaattctacatgccc 1203 ||||| |||||||| ||||||||||||||||| || || || || | ||| ||||||||| Sbjct: 613 gcgagagtctgcggtctcgacacccctttccctctcgtgtacgagccattttacatgccc 672 Query: 1204 acaaagaacaag 1215 || ||||||||| Sbjct: 673 accaagaacaag 684
>gb|BT013225.1| Lycopersicon esculentum clone 134466F, mRNA sequence Length = 1319 Score = 228 bits (115), Expect = 4e-56 Identities = 622/791 (78%) Strand = Plus / Plus Query: 346 tcttacgtctttggagaggatgtgggtttcggcggcgtcttccgctgcacgacagggcta 405 ||||| || |||||||| ||||| ||||| || || ||||| || ||||| || |||||| Sbjct: 262 tcttatgtatttggagaagatgttggttttggtggtgtctttcgttgcactactgggcta 321 Query: 406 gccgaacgattcgggaaacagagagtattcaatacgccattgtgtgaacagggtattgcc 465 || || ||||| || |||||||| || || || || || ||||||| ||||| || | Sbjct: 322 gctgaccgatttggtaaacagagggtctttaacactcctctgtgtgagcagggcatagtt 381 Query: 466 ggatttgctattggcttagcagcaatggacaatagagctattgctgaaatccagtttgca 525 |||||||| ||||| | || |||||||||||| ||||| | || ||||| || |||||| Sbjct: 382 ggatttgcgattggtcttgctgcaatggacaatcgagctgtagcagaaattcaatttgca 441 Query: 526 gattatatctttccagcatttgatcagattgtcaacgaagccgctaaattcagataccga 585 |||||||| ||||| || ||||||||||||||||| ||||| || |||||||||||||| Sbjct: 442 gattatatatttcctgcttttgatcagattgtcaatgaagctgcgaaattcagataccgg 501 Query: 586 agtggaaatgaatttaactgtggaggtttaacaattcgatctccatatggtgctgttgga 645 ||||| || | || ||||| ||||||||||| || || | || ||||| ||||||||| Sbjct: 502 agtggtaaccagttcaactgcggaggtttaactataagagcaccttatggagctgttgga 561 Query: 646 catggtggtcactaccattcacagtcaccagaggctttcttctgccatgttcctggcctg 705 |||||||| || ||||| || || || || || |||||||||||||||||||||| | Sbjct: 562 catggtgggcattaccactctcaatcccctgaatctttcttctgccatgttcctggtata 621 Query: 706 aaggttgtcatacctcggagtccacgtgaggccaagggactgttgctggccagcattcgt 765 ||||| ||||| || || ||||||| | || || ||| || || || | ||||| ||| Sbjct: 622 aaggtggtcatcccacgcagtccacagcaagcaaaaggattgctgttgtcaagcatacgt 681 Query: 766 gacccaaacccagtcatctttttcgagccaaagtggctgtaccgtttggctgttgaagaa 825 |||||||| ||||| | ||||| || ||||||| ||| ||||| |||||||||||||| Sbjct: 682 gacccaaatccagttgttttttttgaaccaaagttgctttaccggatggctgttgaagaa 741 Query: 826 gttcctgagggggactatatgctgcctttatcccaggcggaagtgatccgcaaaggaagt 885 |||||| | | || |||||| ||||| |||| |||| || || || | |||| | | Sbjct: 742 gttcctaaagatgattatatgttgcctctatctgaggcagaggtcctcagggaaggtact 801 Query: 886 gatataacacttgttggttggggagctcaacttgcagtgttggcacaagcatgtgaagat 945 ||||| ||| | ||||||||||||||||| || | | ||| || ||||||| ||| Sbjct: 802 gatatcacattagttggttggggagctcagctatctattatggagcaggcatgtgtagaa 861 Query: 946 gcttcaaaggatggaatttcttgcgagctcatagatctaagaacgctaattccatgggac 1005 ||| ||||||| || || ||||| || || ||||| || | ||| |||| || |||||| Sbjct: 862 gctgcaaaggaggggatctcttgtgaactgatagaccttaaaactttaataccttgggac 921 Query: 1006 aaggaaacagtcgaggcctctgtcagcaagaccggaaagcttcttgttagtcatgaggcc 1065 |||||||| || ||||||||||||| ||||| |||| ||| || |||||||||| || Sbjct: 922 aaggaaacggtagaggcctctgtcaaaaagacaggaaggctgctgattagtcatgaagct 981 Query: 1066 ccagtcacaggagggtttggtgcagaaatcgctgcatccattgctgagcgctgcttccag 1125 || || ||||| || |||||||| ||||| ||||||| || | ||| || |||||| | Sbjct: 982 cctgtgacaggtggatttggtgctgaaatatctgcatctatagttgaacgttgcttcacg 1041 Query: 1126 aggttagaagc 1136 || |||||||| Sbjct: 1042 agattagaagc 1052
>ref|NM_104426.2| Arabidopsis thaliana BCDH BETA1 (BRANCHED-CHAIN ALPHA-KETO ACID DECARBOXYLASE E1 BETA SUBUNIT); 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropa> (BCDH BETA1) mRNA, complete cds Length = 1304 Score = 184 bits (93), Expect = 6e-43 Identities = 432/545 (79%) Strand = Plus / Plus Query: 313 gcgctccacatcgcgctcgacaccgacccgcgctcttacgtctttggagaggatgtgggt 372 ||||| |||||||| | |||||||| || || ||||| |||||||| || || || || Sbjct: 253 gcgcttcacatcgctttggacaccgatcctcggtcttatgtctttggggaagacgttggc 312 Query: 373 ttcggcggcgtcttccgctgcacgacagggctagccgaacgattcgggaaacagagagta 432 || || || ||||| ||||| || ||||| |||| ||||||||||||||| | | || Sbjct: 313 tttggtggagtctttcgctgtacaacaggtttagctgaacgattcgggaaaaaccgtgtc 372 Query: 433 ttcaatacgccattgtgtgaacagggtattgccggatttgctattggcttagcagcaatg 492 |||||||| || | ||||| ||||| |||| ||||||| ||||| ||||||||||| Sbjct: 373 ttcaatactcctctttgtgagcagggcattgttggatttggcattggtctagcagcaatg 432 Query: 493 gacaatagagctattgctgaaatccagtttgcagattatatctttccagcatttgatcag 552 | ||| |||| |||| || || ||||||||||||||||| | ||| || ||||||||| Sbjct: 433 ggtaatcgagcaattgtagagattcagtttgcagattatatatatcctgcttttgatcag 492 Query: 553 attgtcaacgaagccgctaaattcagataccgaagtggaaatgaatttaactgtggaggt 612 ||||| || ||||| || || ||||||||||||||||| || |||| ||||||||||| Sbjct: 493 attgttaatgaagctgcaaagttcagataccgaagtggtaaccaattcaactgtggagga 552 Query: 613 ttaacaattcgatctccatatggtgctgttggacatggtggtcactaccattcacagtca 672 | || || || | |||||||| || ||||| |||||||| || ||||||||||| || Sbjct: 553 cttacgataagagcaccatatggagcagttggtcatggtggacattaccattcacaatcc 612 Query: 673 ccagaggctttcttctgccatgttcctggcctgaaggttgtcatacctcggagtccacgt 732 || || |||||||| |||||||| ||||| | |||||||| || |||||||||||||| Sbjct: 613 cctgaagctttcttttgccatgtccctggtattaaggttgttatccctcggagtccacga 672 Query: 733 gaggccaagggactgttgctggccagcattcgtgacccaaacccagtcatctttttcgag 792 || || |||||||||||| || | | || ||||| ||||| || || | || ||||| Sbjct: 673 gaagcaaagggactgttgttgtcatgtatccgtgatccaaatcccgttgttttcttcgaa 732 Query: 793 ccaaagtggctgtaccgtttggctgttgaagaagttcctgagggggactatatgctgcct 852 |||||||||||||| ||| || || |||||||| |||||| ||||||||| | ||| Sbjct: 733 ccaaagtggctgtatcgtcaagcagtagaagaagtccctgagcatgactatatgatacct 792 Query: 853 ttatc 857 ||||| Sbjct: 793 ttatc 797 Score = 58.0 bits (29), Expect = 9e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 1185 tgaacaattctacatgcccacaaagaacaagatcgtggatgctattaaagcaactgtaaa 1244 ||||| ||||||||||||||| ||||||||||| ||||||| || ||| | ||||| || Sbjct: 1125 tgaaccattctacatgcccaccaagaacaagatattggatgcaatcaaatcgactgtgaa 1184 Query: 1245 ttact 1249 ||||| Sbjct: 1185 ttact 1189
>gb|BT024741.1| Arabidopsis thaliana At1g55510 mRNA, complete cds Length = 1059 Score = 184 bits (93), Expect = 6e-43 Identities = 432/545 (79%) Strand = Plus / Plus Query: 313 gcgctccacatcgcgctcgacaccgacccgcgctcttacgtctttggagaggatgtgggt 372 ||||| |||||||| | |||||||| || || ||||| |||||||| || || || || Sbjct: 121 gcgcttcacatcgctttggacaccgatcctcggtcttatgtctttggggaagacgttggc 180 Query: 373 ttcggcggcgtcttccgctgcacgacagggctagccgaacgattcgggaaacagagagta 432 || || || ||||| ||||| || ||||| |||| ||||||||||||||| | | || Sbjct: 181 tttggtggagtctttcgctgtacaacaggtttagctgaacgattcgggaaaaaccgtgtc 240 Query: 433 ttcaatacgccattgtgtgaacagggtattgccggatttgctattggcttagcagcaatg 492 |||||||| || | ||||| ||||| |||| ||||||| ||||| ||||||||||| Sbjct: 241 ttcaatactcctctttgtgagcagggcattgttggatttggcattggtctagcagcaatg 300 Query: 493 gacaatagagctattgctgaaatccagtttgcagattatatctttccagcatttgatcag 552 | ||| |||| |||| || || ||||||||||||||||| | ||| || ||||||||| Sbjct: 301 ggtaatcgagcaattgtagagattcagtttgcagattatatatatcctgcttttgatcag 360 Query: 553 attgtcaacgaagccgctaaattcagataccgaagtggaaatgaatttaactgtggaggt 612 ||||| || ||||| || || ||||||||||||||||| || |||| ||||||||||| Sbjct: 361 attgttaatgaagctgcaaagttcagataccgaagtggtaaccaattcaactgtggagga 420 Query: 613 ttaacaattcgatctccatatggtgctgttggacatggtggtcactaccattcacagtca 672 | || || || | |||||||| || ||||| |||||||| || ||||||||||| || Sbjct: 421 cttacgataagagcaccatatggagcagttggtcatggtggacattaccattcacaatcc 480 Query: 673 ccagaggctttcttctgccatgttcctggcctgaaggttgtcatacctcggagtccacgt 732 || || |||||||| |||||||| ||||| | |||||||| || |||||||||||||| Sbjct: 481 cctgaagctttcttttgccatgtccctggtattaaggttgttatccctcggagtccacga 540 Query: 733 gaggccaagggactgttgctggccagcattcgtgacccaaacccagtcatctttttcgag 792 || || |||||||||||| || | | || ||||| ||||| || || | || ||||| Sbjct: 541 gaagcaaagggactgttgttgtcatgtatccgtgatccaaatcccgttgttttcttcgaa 600 Query: 793 ccaaagtggctgtaccgtttggctgttgaagaagttcctgagggggactatatgctgcct 852 |||||||||||||| ||| || || |||||||| |||||| ||||||||| | ||| Sbjct: 601 ccaaagtggctgtatcgtcaagcagtagaagaagtccctgagcatgactatatgatacct 660 Query: 853 ttatc 857 ||||| Sbjct: 661 ttatc 665 Score = 58.0 bits (29), Expect = 9e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 1185 tgaacaattctacatgcccacaaagaacaagatcgtggatgctattaaagcaactgtaaa 1244 ||||| ||||||||||||||| ||||||||||| ||||||| || ||| | ||||| || Sbjct: 993 tgaaccattctacatgcccaccaagaacaagatattggatgcaatcaaatcgactgtgaa 1052 Query: 1245 ttact 1249 ||||| Sbjct: 1053 ttact 1057
>emb|BX841846.1|CNS09Y1V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS7ZA12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1248 Score = 184 bits (93), Expect = 6e-43 Identities = 432/545 (79%) Strand = Plus / Plus Query: 313 gcgctccacatcgcgctcgacaccgacccgcgctcttacgtctttggagaggatgtgggt 372 ||||| |||||||| | |||||||| || || ||||| |||||||| || || || || Sbjct: 239 gcgcttcacatcgctttggacaccgatcctcggtcttatgtctttggggaagacgttggc 298 Query: 373 ttcggcggcgtcttccgctgcacgacagggctagccgaacgattcgggaaacagagagta 432 || || || ||||| ||||| || ||||| |||| ||||||||||||||| | | || Sbjct: 299 tttggtggagtctttcgctgtacaacaggtttagctgaacgattcgggaaaaaccgtgtc 358 Query: 433 ttcaatacgccattgtgtgaacagggtattgccggatttgctattggcttagcagcaatg 492 |||||||| || | ||||| ||||| |||| ||||||| ||||| ||||||||||| Sbjct: 359 ttcaatactcctctttgtgagcagggcattgttggatttggcattggtctagcagcaatg 418 Query: 493 gacaatagagctattgctgaaatccagtttgcagattatatctttccagcatttgatcag 552 | ||| |||| |||| || || ||||||||||||||||| | ||| || ||||||||| Sbjct: 419 ggtaatcgagcaattgtagagattcagtttgcagattatatatatcctgcttttgatcag 478 Query: 553 attgtcaacgaagccgctaaattcagataccgaagtggaaatgaatttaactgtggaggt 612 ||||| || ||||| || || ||||||||||||||||| || |||| ||||||||||| Sbjct: 479 attgttaatgaagctgcaaagttcagataccgaagtggtaaccaattcaactgtggagga 538 Query: 613 ttaacaattcgatctccatatggtgctgttggacatggtggtcactaccattcacagtca 672 | || || || | |||||||| || ||||| |||||||| || ||||||||||| || Sbjct: 539 cttacgataagagcaccatatggagcagttggtcatggtggacattaccattcacaatcc 598 Query: 673 ccagaggctttcttctgccatgttcctggcctgaaggttgtcatacctcggagtccacgt 732 || || |||||||| |||||||| ||||| | |||||||| || |||||||||||||| Sbjct: 599 cctgaagctttcttttgccatgtccctggtattaaggttgttatccctcggagtccacga 658 Query: 733 gaggccaagggactgttgctggccagcattcgtgacccaaacccagtcatctttttcgag 792 || || |||||||||||| || | | || ||||| ||||| || || | || ||||| Sbjct: 659 gaagcaaagggactgttgttgtcatgtatccgtgatccaaatcccgttgttttcttcgaa 718 Query: 793 ccaaagtggctgtaccgtttggctgttgaagaagttcctgagggggactatatgctgcct 852 |||||||||||||| ||| || || |||||||| |||||| ||||||||| | ||| Sbjct: 719 ccaaagtggctgtatcgtcaagcagtagaagaagtccctgagcatgactatatgatacct 778 Query: 853 ttatc 857 ||||| Sbjct: 779 ttatc 783 Score = 58.0 bits (29), Expect = 9e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 1185 tgaacaattctacatgcccacaaagaacaagatcgtggatgctattaaagcaactgtaaa 1244 ||||| ||||||||||||||| ||||||||||| ||||||| || ||| | ||||| || Sbjct: 1111 tgaaccattctacatgcccaccaagaacaagatattggatgcaatcaaatcgactgtgaa 1170 Query: 1245 ttact 1249 ||||| Sbjct: 1171 ttact 1175
>gb|AF061638.1|AF061638 Arabidopsis thaliana branched-chain alpha-keto acid decarboxylase E1 beta subunit (BCDH beta1) mRNA, complete cds Length = 1319 Score = 176 bits (89), Expect = 1e-40 Identities = 431/545 (79%) Strand = Plus / Plus Query: 313 gcgctccacatcgcgctcgacaccgacccgcgctcttacgtctttggagaggatgtgggt 372 ||||| |||||||| | |||||||| || || ||||| |||||||| || || || || Sbjct: 253 gcgcttcacatcgctttggacaccgatcctcggtcttatgtctttggggaagacgttggc 312 Query: 373 ttcggcggcgtcttccgctgcacgacagggctagccgaacgattcgggaaacagagagta 432 || || || ||||| ||||| || || || |||| ||||||||||||||| | | || Sbjct: 313 tttggtggagtctttcgctgtacaactggtttagctgaacgattcgggaaaaaccgtgtc 372 Query: 433 ttcaatacgccattgtgtgaacagggtattgccggatttgctattggcttagcagcaatg 492 |||||||| || | ||||| ||||| |||| ||||||| ||||| ||||||||||| Sbjct: 373 ttcaatactcctctttgtgagcagggcattgttggatttggcattggtctagcagcaatg 432 Query: 493 gacaatagagctattgctgaaatccagtttgcagattatatctttccagcatttgatcag 552 | ||| |||| |||| || || ||||||||||||||||| | ||| || ||||||||| Sbjct: 433 ggtaatcgagcaattgtagagattcagtttgcagattatatatatcctgcttttgatcag 492 Query: 553 attgtcaacgaagccgctaaattcagataccgaagtggaaatgaatttaactgtggaggt 612 ||||| || ||||| || || ||||||||||||||||| || |||| ||||||||||| Sbjct: 493 attgttaatgaagctgcaaagttcagataccgaagtggtaaccaattcaactgtggagga 552 Query: 613 ttaacaattcgatctccatatggtgctgttggacatggtggtcactaccattcacagtca 672 | || || || | |||||||| || ||||| |||||||| || ||||||||||| || Sbjct: 553 cttacgataagagcaccatatggagcagttggtcatggtggacattaccattcacaatcc 612 Query: 673 ccagaggctttcttctgccatgttcctggcctgaaggttgtcatacctcggagtccacgt 732 || || |||||||| |||||||| ||||| | |||||||| || |||||||||||||| Sbjct: 613 cctgaagctttcttttgccatgtccctggtattaaggttgttatccctcggagtccacga 672 Query: 733 gaggccaagggactgttgctggccagcattcgtgacccaaacccagtcatctttttcgag 792 || || |||||||||||| || | | || ||||| ||||| || || | || ||||| Sbjct: 673 gaagcaaagggactgttgttgtcatgtatccgtgatccaaatcccgttgttttcttcgaa 732 Query: 793 ccaaagtggctgtaccgtttggctgttgaagaagttcctgagggggactatatgctgcct 852 |||||||||||||| ||| || || |||||||| |||||| ||||||||| | ||| Sbjct: 733 ccaaagtggctgtatcgtcaagcagtagaagaagtccctgagcatgactatatgatacct 792 Query: 853 ttatc 857 ||||| Sbjct: 793 ttatc 797 Score = 58.0 bits (29), Expect = 9e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 1185 tgaacaattctacatgcccacaaagaacaagatcgtggatgctattaaagcaactgtaaa 1244 ||||| ||||||||||||||| ||||||||||| ||||||| || ||| | ||||| || Sbjct: 1125 tgaaccattctacatgcccaccaagaacaagatattggatgcaatcaaatcgactgtgaa 1184 Query: 1245 ttact 1249 ||||| Sbjct: 1185 ttact 1189
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 135 bits (68), Expect = 5e-28 Identities = 92/100 (92%) Strand = Plus / Minus Query: 953 aggatggaatttcttgcgagctcatagatctaagaacgctaattccatgggacaaggaaa 1012 |||||||||| ||||| |||||||||||||||||||| || |||||||||||||| |||| Sbjct: 3751585 aggatggaatatcttgtgagctcatagatctaagaacactgattccatgggacaaagaaa 3751526 Query: 1013 cagtcgaggcctctgtcagcaagaccggaaagcttcttgt 1052 |||| |||||||||||||||||||| ||||| |||||||| Sbjct: 3751525 cagtagaggcctctgtcagcaagacaggaaaacttcttgt 3751486 Score = 117 bits (59), Expect = 1e-22 Identities = 89/99 (89%) Strand = Plus / Minus Query: 613 ttaacaattcgatctccatatggtgctgttggacatggtggtcactaccattcacagtca 672 ||||| |||||||| || ||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 3753002 ttaacgattcgatcaccttatggcgctgtcggtcatggtggtcactaccattcacagtca 3752943 Query: 673 ccagaggctttcttctgccatgttcctggcctgaaggtt 711 |||||||||||||| || ||||||||||| || |||||| Sbjct: 3752942 ccagaggctttcttttgtcatgttcctggactcaaggtt 3752904 Score = 95.6 bits (48), Expect = 4e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 1128 gttagaagcgcctgtcgcgagggtctgcggcctcgacacccctttcccacttgtttatga 1187 |||||||||||| ||||| || || |||||||| ||||| |||||||| ||||||||||| Sbjct: 3751232 gttagaagcgcccgtcgcaagagtatgcggcctggacactcctttccctcttgtttatga 3751173 Query: 1188 acaattctacatgcccacaaagaacaag 1215 | ||| ||||||||||||||||||||| Sbjct: 3751172 aacattttacatgcccacaaagaacaag 3751145 Score = 89.7 bits (45), Expect = 3e-14 Identities = 54/57 (94%) Strand = Plus / Minus Query: 496 aatagagctattgctgaaatccagtttgcagattatatctttccagcatttgatcag 552 ||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 3753530 aatagagctattgctgagatccagttcgcagattatatctttccagcttttgatcag 3753474 Score = 87.7 bits (44), Expect = 1e-13 Identities = 71/80 (88%) Strand = Plus / Minus Query: 868 gtgatccgcaaaggaagtgatataacacttgttggttggggagctcaacttgcagtgttg 927 ||||| || |||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 3752210 gtgattcgtaaaggaagtgatataacactaattggttggggagctcaacttgcagtactg 3752151 Query: 928 gcacaagcatgtgaagatgc 947 | | ||||||| |||||||| Sbjct: 3752150 gaagaagcatgcgaagatgc 3752131 Score = 87.7 bits (44), Expect = 1e-13 Identities = 59/64 (92%) Strand = Plus / Minus Query: 550 cagattgtcaacgaagccgctaaattcagataccgaagtggaaatgaatttaactgtgga 609 |||||||| || ||||| |||||||| |||||||| |||||||||||||||||||||||| Sbjct: 3753144 cagattgttaatgaagcagctaaatttagataccggagtggaaatgaatttaactgtgga 3753085 Query: 610 ggtt 613 |||| Sbjct: 3753084 ggtt 3753081 Score = 87.7 bits (44), Expect = 1e-13 Identities = 56/60 (93%) Strand = Plus / Minus Query: 285 ggtgaacctcttcaccgccgtcaaccaggcgctccacatcgcgctcgacaccgacccgcg 344 ||||||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 3754554 ggtgaacctgttcacggccatcaaccaggcgctccacatcgccctcgacaccgacccgcg 3754495 Score = 83.8 bits (42), Expect = 2e-12 Identities = 75/86 (87%) Strand = Plus / Minus Query: 713 tcatacctcggagtccacgtgaggccaagggactgttgctggccagcattcgtgacccaa 772 |||||||||| ||||||||||| ||||||||| ||||| |||| |||||| | ||||||| Sbjct: 3752596 tcatacctcgaagtccacgtgaagccaagggattgttgttggcaagcattagagacccaa 3752537 Query: 773 acccagtcatctttttcgagccaaag 798 | |||||| | ||||| ||||||||| Sbjct: 3752536 atccagtcgtattttttgagccaaag 3752511 Score = 77.8 bits (39), Expect = 1e-10 Identities = 51/55 (92%) Strand = Plus / Minus Query: 797 agtggctgtaccgtttggctgttgaagaagttcctgagggggactatatgctgcc 851 ||||| |||||||||||||||||||||||||||| |||| ||| ||||||||||| Sbjct: 3752359 agtggttgtaccgtttggctgttgaagaagttccagaggaggattatatgctgcc 3752305 Score = 75.8 bits (38), Expect = 4e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 1051 gttagtcatgaggccccagtcacaggagggtttggtgcagaaatcgctgcatccattgct 1110 ||||| |||||||| ||| |||| |||||||||||||||||||| || |||||||| | Sbjct: 3751410 gttagccatgaggctccaatcaccggagggtttggtgcagaaattgccgcatccatcacc 3751351 Query: 1111 gagcgctgcttcca 1124 |||||||||||||| Sbjct: 3751350 gagcgctgcttcca 3751337 Score = 75.8 bits (38), Expect = 4e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 344 gctcttacgtctttggagaggatgtgggtttcggcggcgtcttccgctgcacgacagggc 403 ||||||| ||||| || || |||||||||||||| || |||||||||||||| ||||||| Sbjct: 3753974 gctcttatgtcttcggggaagatgtgggtttcggtggtgtcttccgctgcacaacagggc 3753915 Query: 404 tagccgaacgattcgggaaacagagagtattcaatacgccattgtgtgaacagg 457 | || || || || || | | ||||| ||||||||||| ||||||||||||| Sbjct: 3753914 tcgctgatcggtttggcaggaatagagttttcaatacgccgttgtgtgaacagg 3753861 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Minus Query: 1220 tggatgctattaaagcaactgtaaattactgaggt 1254 |||| ||||| |||||||||||||||||||||||| Sbjct: 3751059 tggacgctatcaaagcaactgtaaattactgaggt 3751025
>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0050F10 Length = 151986 Score = 135 bits (68), Expect = 5e-28 Identities = 92/100 (92%) Strand = Plus / Minus Query: 953 aggatggaatttcttgcgagctcatagatctaagaacgctaattccatgggacaaggaaa 1012 |||||||||| ||||| |||||||||||||||||||| || |||||||||||||| |||| Sbjct: 95936 aggatggaatatcttgtgagctcatagatctaagaacactgattccatgggacaaagaaa 95877 Query: 1013 cagtcgaggcctctgtcagcaagaccggaaagcttcttgt 1052 |||| |||||||||||||||||||| ||||| |||||||| Sbjct: 95876 cagtagaggcctctgtcagcaagacaggaaaacttcttgt 95837 Score = 117 bits (59), Expect = 1e-22 Identities = 89/99 (89%) Strand = Plus / Minus Query: 613 ttaacaattcgatctccatatggtgctgttggacatggtggtcactaccattcacagtca 672 ||||| |||||||| || ||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 97353 ttaacgattcgatcaccttatggcgctgtcggtcatggtggtcactaccattcacagtca 97294 Query: 673 ccagaggctttcttctgccatgttcctggcctgaaggtt 711 |||||||||||||| || ||||||||||| || |||||| Sbjct: 97293 ccagaggctttcttttgtcatgttcctggactcaaggtt 97255 Score = 95.6 bits (48), Expect = 4e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 1128 gttagaagcgcctgtcgcgagggtctgcggcctcgacacccctttcccacttgtttatga 1187 |||||||||||| ||||| || || |||||||| ||||| |||||||| ||||||||||| Sbjct: 95583 gttagaagcgcccgtcgcaagagtatgcggcctggacactcctttccctcttgtttatga 95524 Query: 1188 acaattctacatgcccacaaagaacaag 1215 | ||| ||||||||||||||||||||| Sbjct: 95523 aacattttacatgcccacaaagaacaag 95496 Score = 89.7 bits (45), Expect = 3e-14 Identities = 54/57 (94%) Strand = Plus / Minus Query: 496 aatagagctattgctgaaatccagtttgcagattatatctttccagcatttgatcag 552 ||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 97881 aatagagctattgctgagatccagttcgcagattatatctttccagcttttgatcag 97825 Score = 87.7 bits (44), Expect = 1e-13 Identities = 71/80 (88%) Strand = Plus / Minus Query: 868 gtgatccgcaaaggaagtgatataacacttgttggttggggagctcaacttgcagtgttg 927 ||||| || |||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 96561 gtgattcgtaaaggaagtgatataacactaattggttggggagctcaacttgcagtactg 96502 Query: 928 gcacaagcatgtgaagatgc 947 | | ||||||| |||||||| Sbjct: 96501 gaagaagcatgcgaagatgc 96482 Score = 87.7 bits (44), Expect = 1e-13 Identities = 59/64 (92%) Strand = Plus / Minus Query: 550 cagattgtcaacgaagccgctaaattcagataccgaagtggaaatgaatttaactgtgga 609 |||||||| || ||||| |||||||| |||||||| |||||||||||||||||||||||| Sbjct: 97495 cagattgttaatgaagcagctaaatttagataccggagtggaaatgaatttaactgtgga 97436 Query: 610 ggtt 613 |||| Sbjct: 97435 ggtt 97432 Score = 87.7 bits (44), Expect = 1e-13 Identities = 56/60 (93%) Strand = Plus / Minus Query: 285 ggtgaacctcttcaccgccgtcaaccaggcgctccacatcgcgctcgacaccgacccgcg 344 ||||||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 98905 ggtgaacctgttcacggccatcaaccaggcgctccacatcgccctcgacaccgacccgcg 98846 Score = 83.8 bits (42), Expect = 2e-12 Identities = 75/86 (87%) Strand = Plus / Minus Query: 713 tcatacctcggagtccacgtgaggccaagggactgttgctggccagcattcgtgacccaa 772 |||||||||| ||||||||||| ||||||||| ||||| |||| |||||| | ||||||| Sbjct: 96947 tcatacctcgaagtccacgtgaagccaagggattgttgttggcaagcattagagacccaa 96888 Query: 773 acccagtcatctttttcgagccaaag 798 | |||||| | ||||| ||||||||| Sbjct: 96887 atccagtcgtattttttgagccaaag 96862 Score = 77.8 bits (39), Expect = 1e-10 Identities = 51/55 (92%) Strand = Plus / Minus Query: 797 agtggctgtaccgtttggctgttgaagaagttcctgagggggactatatgctgcc 851 ||||| |||||||||||||||||||||||||||| |||| ||| ||||||||||| Sbjct: 96710 agtggttgtaccgtttggctgttgaagaagttccagaggaggattatatgctgcc 96656 Score = 75.8 bits (38), Expect = 4e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 1051 gttagtcatgaggccccagtcacaggagggtttggtgcagaaatcgctgcatccattgct 1110 ||||| |||||||| ||| |||| |||||||||||||||||||| || |||||||| | Sbjct: 95761 gttagccatgaggctccaatcaccggagggtttggtgcagaaattgccgcatccatcacc 95702 Query: 1111 gagcgctgcttcca 1124 |||||||||||||| Sbjct: 95701 gagcgctgcttcca 95688 Score = 75.8 bits (38), Expect = 4e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 344 gctcttacgtctttggagaggatgtgggtttcggcggcgtcttccgctgcacgacagggc 403 ||||||| ||||| || || |||||||||||||| || |||||||||||||| ||||||| Sbjct: 98325 gctcttatgtcttcggggaagatgtgggtttcggtggtgtcttccgctgcacaacagggc 98266 Query: 404 tagccgaacgattcgggaaacagagagtattcaatacgccattgtgtgaacagg 457 | || || || || || | | ||||| ||||||||||| ||||||||||||| Sbjct: 98265 tcgctgatcggtttggcaggaatagagttttcaatacgccgttgtgtgaacagg 98212 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Minus Query: 1220 tggatgctattaaagcaactgtaaattactgaggt 1254 |||| ||||| |||||||||||||||||||||||| Sbjct: 95410 tggacgctatcaaagcaactgtaaattactgaggt 95376
>dbj|AK229269.1| Arabidopsis thaliana mRNA for branched chain alpha-keto acid dehydrogenase E1 beta subunit, complete cds, clone: RAFL16-55-A06 Length = 1357 Score = 97.6 bits (49), Expect = 1e-16 Identities = 115/137 (83%) Strand = Plus / Plus Query: 475 attggcttagcagcaatggacaatagagctattgctgaaatccagtttgcagattatatc 534 ||||| ||||| ||||||| ||| ||| |||||| ||||| |||||||| |||||||| Sbjct: 440 attggtttagctgcaatgggaaatcgagttattgcggaaattcagtttgcggattatatt 499 Query: 535 tttccagcatttgatcagattgtcaacgaagccgctaaattcagataccgaagtggaaat 594 || || || |||||||||||||| || || || || || |||||||||||||||||||| Sbjct: 500 ttcccggcttttgatcagattgttaatgaggctgcaaagttcagataccgaagtggaaac 559 Query: 595 gaatttaactgtggagg 611 | |||||||||||||| Sbjct: 560 cagtttaactgtggagg 576 Score = 52.0 bits (26), Expect = 0.006 Identities = 143/182 (78%) Strand = Plus / Plus Query: 1045 cttcttgttagtcatgaggccccagtcacaggagggtttggtgcagaaatcgctgcatcc 1104 |||||| |||| ||||| || || || |||||||| ||||| || || ||||||||| | Sbjct: 1010 cttcttattagccatgaagctcctgttacaggaggctttggggccgagatcgctgcaact 1069 Query: 1105 attgctgagcgctgcttccagaggttagaagcgcctgtcgcgagggtctgcggcctcgac 1164 || | |||||| |||||| ||||||||||| ||||| || || || ||||| ||| Sbjct: 1070 atagttgagcgttgcttcttaaggttagaagcacctgtaagcagagtttgtggcctggac 1129 Query: 1165 acccctttcccacttgtttatgaacaattctacatgcccacaaagaacaagatcgtggat 1224 || |||||||| || || | |||| ||||||||||| || ||||||||||| ||||| Sbjct: 1130 actcctttccctctagtgttcgaacctttctacatgccaaccaagaacaagatattggat 1189 Query: 1225 gc 1226 || Sbjct: 1190 gc 1191
>gb|BT024889.1| Arabidopsis thaliana At3g13450 mRNA, complete cds Length = 1077 Score = 97.6 bits (49), Expect = 1e-16 Identities = 115/137 (83%) Strand = Plus / Plus Query: 475 attggcttagcagcaatggacaatagagctattgctgaaatccagtttgcagattatatc 534 ||||| ||||| ||||||| ||| ||| |||||| ||||| |||||||| |||||||| Sbjct: 301 attggtttagctgcaatgggaaatcgagttattgcggaaattcagtttgcggattatatt 360 Query: 535 tttccagcatttgatcagattgtcaacgaagccgctaaattcagataccgaagtggaaat 594 || || || |||||||||||||| || || || || || |||||||||||||||||||| Sbjct: 361 ttcccggcttttgatcagattgttaatgaggctgcaaagttcagataccgaagtggaaac 420 Query: 595 gaatttaactgtggagg 611 | |||||||||||||| Sbjct: 421 cagtttaactgtggagg 437 Score = 60.0 bits (30), Expect = 2e-05 Identities = 144/182 (79%) Strand = Plus / Plus Query: 1045 cttcttgttagtcatgaggccccagtcacaggagggtttggtgcagaaatcgctgcatcc 1104 |||||| |||| ||||| || || || |||||||| ||||| || || ||||||||| | Sbjct: 871 cttcttattagccatgaagctcctgttacaggaggctttggggccgagatcgctgcaact 930 Query: 1105 attgctgagcgctgcttccagaggttagaagcgcctgtcgcgagggtctgcggcctcgac 1164 || | |||||| |||||| |||||||||||| ||||| || || || ||||| ||| Sbjct: 931 atagttgagcgttgcttcttgaggttagaagcacctgtaagcagagtttgtggcctggac 990 Query: 1165 acccctttcccacttgtttatgaacaattctacatgcccacaaagaacaagatcgtggat 1224 || |||||||| || || | |||| ||||||||||| || ||||||||||| ||||| Sbjct: 991 actcctttccctctagtgttcgaacctttctacatgccaaccaagaacaagatattggat 1050 Query: 1225 gc 1226 || Sbjct: 1051 gc 1052
>ref|NM_112191.2| Arabidopsis thaliana DIN4 (DARK INDUCIBLE 4); 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (DIN4) mRNA, complete cds Length = 1358 Score = 97.6 bits (49), Expect = 1e-16 Identities = 115/137 (83%) Strand = Plus / Plus Query: 475 attggcttagcagcaatggacaatagagctattgctgaaatccagtttgcagattatatc 534 ||||| ||||| ||||||| ||| ||| |||||| ||||| |||||||| |||||||| Sbjct: 440 attggtttagctgcaatgggaaatcgagttattgcggaaattcagtttgcggattatatt 499 Query: 535 tttccagcatttgatcagattgtcaacgaagccgctaaattcagataccgaagtggaaat 594 || || || |||||||||||||| || || || || || |||||||||||||||||||| Sbjct: 500 ttcccggcttttgatcagattgttaatgaggctgcaaagttcagataccgaagtggaaac 559 Query: 595 gaatttaactgtggagg 611 | |||||||||||||| Sbjct: 560 cagtttaactgtggagg 576 Score = 60.0 bits (30), Expect = 2e-05 Identities = 144/182 (79%) Strand = Plus / Plus Query: 1045 cttcttgttagtcatgaggccccagtcacaggagggtttggtgcagaaatcgctgcatcc 1104 |||||| |||| ||||| || || || |||||||| ||||| || || ||||||||| | Sbjct: 1010 cttcttattagccatgaagctcctgttacaggaggctttggggccgagatcgctgcaact 1069 Query: 1105 attgctgagcgctgcttccagaggttagaagcgcctgtcgcgagggtctgcggcctcgac 1164 || | |||||| |||||| |||||||||||| ||||| || || || ||||| ||| Sbjct: 1070 atagttgagcgttgcttcttgaggttagaagcacctgtaagcagagtttgtggcctggac 1129 Query: 1165 acccctttcccacttgtttatgaacaattctacatgcccacaaagaacaagatcgtggat 1224 || |||||||| || || | |||| ||||||||||| || ||||||||||| ||||| Sbjct: 1130 actcctttccctctagtgttcgaacctttctacatgccaaccaagaacaagatattggat 1189 Query: 1225 gc 1226 || Sbjct: 1190 gc 1191
>gb|AF145452.1|AF145452 Arabidopsis thaliana branched chain alpha-keto acid dehydrogenase E1 beta subunit (din4) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1326 Score = 97.6 bits (49), Expect = 1e-16 Identities = 115/137 (83%) Strand = Plus / Plus Query: 475 attggcttagcagcaatggacaatagagctattgctgaaatccagtttgcagattatatc 534 ||||| ||||| ||||||| ||| ||| |||||| ||||| |||||||| |||||||| Sbjct: 379 attggtttagctgcaatgggaaatcgagttattgcggaaattcagtttgcggattatatt 438 Query: 535 tttccagcatttgatcagattgtcaacgaagccgctaaattcagataccgaagtggaaat 594 || || || |||||||||||||| || || || || || |||||||||||||||||||| Sbjct: 439 ttcccggcttttgatcagattgttaatgaggctgcaaagttcagataccgaagtggaaac 498 Query: 595 gaatttaactgtggagg 611 | |||||||||||||| Sbjct: 499 cagtttaactgtggagg 515 Score = 60.0 bits (30), Expect = 2e-05 Identities = 144/182 (79%) Strand = Plus / Plus Query: 1045 cttcttgttagtcatgaggccccagtcacaggagggtttggtgcagaaatcgctgcatcc 1104 |||||| |||| ||||| || || || |||||||| ||||| || || ||||||||| | Sbjct: 949 cttcttattagccatgaagctcctgttacaggaggctttggggccgagatcgctgcaact 1008 Query: 1105 attgctgagcgctgcttccagaggttagaagcgcctgtcgcgagggtctgcggcctcgac 1164 || | |||||| |||||| |||||||||||| ||||| || || || ||||| ||| Sbjct: 1009 atagttgagcgttgcttcttgaggttagaagcacctgtaagcagagtttgtggcctggac 1068 Query: 1165 acccctttcccacttgtttatgaacaattctacatgcccacaaagaacaagatcgtggat 1224 || |||||||| || || | |||| ||||||||||| || ||||||||||| ||||| Sbjct: 1069 actcctttccctctagtgttcgaacctttctacatgccaaccaagaacaagatattggat 1128 Query: 1225 gc 1226 || Sbjct: 1129 gc 1130
>gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14, complete sequence Length = 87967 Score = 93.7 bits (47), Expect = 2e-15 Identities = 104/123 (84%) Strand = Plus / Minus Query: 628 ccatatggtgctgttggacatggtggtcactaccattcacagtcaccagaggctttcttc 687 |||||||| || ||||| |||||||| || ||||||||||| || || || |||||||| Sbjct: 46539 ccatatggagcagttggtcatggtggacattaccattcacaatcccctgaagctttcttt 46480 Query: 688 tgccatgttcctggcctgaaggttgtcatacctcggagtccacgtgaggccaagggactg 747 |||||||| ||||| | |||||||| || |||||||||||||| || || ||||||||| Sbjct: 46479 tgccatgtccctggtattaaggttgttatccctcggagtccacgagaagcaaagggactg 46420 Query: 748 ttg 750 ||| Sbjct: 46419 ttg 46417 Score = 52.0 bits (26), Expect = 0.006 Identities = 53/62 (85%) Strand = Plus / Minus Query: 551 agattgtcaacgaagccgctaaattcagataccgaagtggaaatgaatttaactgtggag 610 ||||||| || ||||| || || ||||||||||||||||| || |||| |||||||||| Sbjct: 46699 agattgttaatgaagctgcaaagttcagataccgaagtggtaaccaattcaactgtggag 46640 Query: 611 gt 612 || Sbjct: 46639 gt 46638 Score = 46.1 bits (23), Expect = 0.35 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1185 tgaacaattctacatgcccacaaagaacaag 1215 ||||| ||||||||||||||| ||||||||| Sbjct: 45579 tgaaccattctacatgcccaccaagaacaag 45549
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 87.7 bits (44), Expect = 1e-13 Identities = 80/92 (86%) Strand = Plus / Plus Query: 508 gctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaagcc 567 ||||||||||||||||| |||||||||||||||||||| ||||| || || || ||| | Sbjct: 2111599 gctgaaatccagtttgccgattatatctttccagcattcgatcaaatcgttaatgaatct 2111658 Query: 568 gctaaattcagataccgaagtggaaatgaatt 599 || |||||||| ||||| ||||| |||||||| Sbjct: 2111659 gccaaattcaggtaccgcagtggtaatgaatt 2111690
>ref|XM_001062965.1| PREDICTED: Rattus norvegicus branched chain keto acid dehydrogenase E1, beta polypeptide (Bckdhb), mRNA Length = 1493 Score = 75.8 bits (38), Expect = 4e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 501 agctattgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaa 560 ||||||||| |||||||||||||| || ||||| || || || ||||||||||||||||| Sbjct: 448 agctattgcggaaatccagtttgccgactatattttccctgcctttgatcagattgtcaa 507 Query: 561 cgaagc 566 |||||| Sbjct: 508 cgaagc 513
>ref|XM_343439.3| PREDICTED: Rattus norvegicus branched chain keto acid dehydrogenase E1, beta polypeptide (Bckdhb), mRNA Length = 1493 Score = 75.8 bits (38), Expect = 4e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 501 agctattgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaa 560 ||||||||| |||||||||||||| || ||||| || || || ||||||||||||||||| Sbjct: 448 agctattgcggaaatccagtttgccgactatattttccctgcctttgatcagattgtcaa 507 Query: 561 cgaagc 566 |||||| Sbjct: 508 cgaagc 513
>ref|XM_918156.2| PREDICTED: Mus musculus branched chain ketoacid dehydrogenase E1, beta polypeptide (Bckdhb), mRNA Length = 1479 Score = 75.8 bits (38), Expect = 4e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 501 agctattgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaa 560 ||||||||| |||||||||||||| || ||||| || || || ||||||||||||||||| Sbjct: 444 agctattgcggaaatccagtttgccgactatattttccctgcctttgatcagattgtcaa 503 Query: 561 cgaagc 566 |||||| Sbjct: 504 cgaagc 509
>ref|NM_199195.1| Mus musculus branched chain ketoacid dehydrogenase E1, beta polypeptide (Bckdhb), mRNA gb|BC064099.1| Mus musculus branched chain ketoacid dehydrogenase E1, beta polypeptide, mRNA (cDNA clone MGC:73769 IMAGE:1246285), complete cds Length = 1419 Score = 75.8 bits (38), Expect = 4e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 501 agctattgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaa 560 ||||||||| |||||||||||||| || ||||| || || || ||||||||||||||||| Sbjct: 365 agctattgcggaaatccagtttgccgactatattttccctgcctttgatcagattgtcaa 424 Query: 561 cgaagc 566 |||||| Sbjct: 425 cgaagc 430
>gb|M94040.1|RATAKAD Rat branched chain alpha-keto acid dehydrogenase E1-subunit (BCKDHB) mRNA, 3'end Length = 1384 Score = 75.8 bits (38), Expect = 4e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 501 agctattgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaa 560 ||||||||| |||||||||||||| || ||||| || || || ||||||||||||||||| Sbjct: 359 agctattgcggaaatccagtttgccgactatattttccctgcctttgatcagattgtcaa 418 Query: 561 cgaagc 566 |||||| Sbjct: 419 cgaagc 424
>gb|L16992.1|MUSBCKAD Mus musculus branched-chain alpha-ketoacid dehydrogenase E1 beta-subunit mRNA sequence Length = 1390 Score = 75.8 bits (38), Expect = 4e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 501 agctattgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaa 560 ||||||||| |||||||||||||| || ||||| || || || ||||||||||||||||| Sbjct: 437 agctattgcggaaatccagtttgccgactatattttccctgcctttgatcagattgtcaa 496 Query: 561 cgaagc 566 |||||| Sbjct: 497 cgaagc 502
>ref|XM_642404.1| Dictyostelium discoideum AX4 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) (bkdB) mRNA, complete cds Length = 1113 Score = 73.8 bits (37), Expect = 2e-09 Identities = 58/65 (89%) Strand = Plus / Plus Query: 613 ttaacaattcgatctccatatggtgctgttggacatggtggtcactaccattcacagtca 672 ||||||||| |||| ||||||||||| |||||||||||||| || || |||||||| ||| Sbjct: 472 ttaacaattagatcaccatatggtgcagttggacatggtggacattatcattcacaatca 531 Query: 673 ccaga 677 ||||| Sbjct: 532 ccaga 536
>ref|NM_204657.1| Gallus gallus branched chain keto acid dehydrogenase E1, beta polypeptide (BCKDHB), mRNA dbj|AB035084.1| Gallus gallus mRNA for branched-chain alpha-keto acid dehydrogenase E1-beta subunit, complete cds Length = 1543 Score = 73.8 bits (37), Expect = 2e-09 Identities = 58/65 (89%) Strand = Plus / Plus Query: 502 gctattgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaac 561 |||||||| ||||| || ||||||||||| || ||||||||||||||||||||||| || Sbjct: 430 gctattgcagaaattcaatttgcagattacatttttccagcatttgatcagattgttaat 489 Query: 562 gaagc 566 ||||| Sbjct: 490 gaagc 494
>gb|CP000469.1| Shewanella sp. ANA-3, complete genome Length = 4972204 Score = 71.9 bits (36), Expect = 6e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 511 gaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaagccgct 570 ||||||||||| || ||||| ||||||||||| || |||||||| || ||||| | ||| Sbjct: 2556241 gaaatccagttcgccgattacatctttccagcgttcgatcagatagtgaacgagtctgct 2556182 Query: 571 aaattcagataccgaagtggaaatgaatttaa 602 |||||| | ||||| ||||| ||||||||||| Sbjct: 2556181 aaattccgttaccgcagtggtaatgaatttaa 2556150
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 71.9 bits (36), Expect = 6e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 514 atccagtttgcagattatatctttccagcatttgatcagattgtcaacgaagccgctaaa 573 |||||||| || |||||| |||| ||||| || || |||||||||||||||||||| ||| Sbjct: 891146 atccagttcgcggattatgtcttcccagctttcgaccagattgtcaacgaagccgcaaaa 891087 Query: 574 ttcagata 581 |||||||| Sbjct: 891086 ttcagata 891079
>dbj|AK156264.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830014C15 product:branched chain ketoacid dehydrogenase E1, beta polypeptide, full insert sequence Length = 1476 Score = 71.9 bits (36), Expect = 6e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 503 ctattgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacg 562 ||||||| |||||||||||||| || ||||| || || || ||||||||||||||||||| Sbjct: 444 ctattgcggaaatccagtttgccgactatattttccctgcctttgatcagattgtcaacg 503 Query: 563 aagc 566 |||| Sbjct: 504 aagc 507
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 71.9 bits (36), Expect = 6e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 511 gaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaagccgct 570 |||||||||||||| ||||| ||||| ||||| |||||||||||||| ||||| | ||| Sbjct: 2447791 gaaatccagtttgctgattacatcttcccagcgtttgatcagattgtaaacgagtcggct 2447850 Query: 571 aaattcagataccgaagtggaaatgaatttaa 602 |||||| | ||||| || || ||||| ||||| Sbjct: 2447851 aaattccgttaccgcagcggtaatgagtttaa 2447882
>gb|BT020085.1| Synthetic construct Homo sapiens branched chain keto acid dehydrogenase E1, beta polypeptide (maple syrup urine disease) mRNA, partial cds Length = 1179 Score = 67.9 bits (34), Expect = 9e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaa 564 ||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || ||| Sbjct: 430 attgcggaaattcagtttgcagattatattttccctgcatttgatcagattgttaatgaa 489 Query: 565 gc 566 || Sbjct: 490 gc 491
>gb|BT020063.1| Homo sapiens branched chain keto acid dehydrogenase E1, beta polypeptide (maple syrup urine disease) mRNA, complete cds Length = 1179 Score = 67.9 bits (34), Expect = 9e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaa 564 ||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || ||| Sbjct: 430 attgcggaaattcagtttgcagattatattttccctgcatttgatcagattgttaatgaa 489 Query: 565 gc 566 || Sbjct: 490 gc 491
>gb|BC040139.2| Homo sapiens branched chain keto acid dehydrogenase E1, beta polypeptide (maple syrup urine disease), mRNA (cDNA clone MGC:48849 IMAGE:5493159), complete cds Length = 3661 Score = 67.9 bits (34), Expect = 9e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaa 564 ||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || ||| Sbjct: 435 attgcggaaattcagtttgcagattatattttccctgcatttgatcagattgttaatgaa 494 Query: 565 gc 566 || Sbjct: 495 gc 496
>gb|BC034481.1| Homo sapiens branched chain keto acid dehydrogenase E1, beta polypeptide (maple syrup urine disease), mRNA (cDNA clone MGC:26350 IMAGE:4824846), complete cds Length = 3781 Score = 67.9 bits (34), Expect = 9e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaa 564 ||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || ||| Sbjct: 458 attgcggaaattcagtttgcagattatattttccctgcatttgatcagattgttaatgaa 517 Query: 565 gc 566 || Sbjct: 518 gc 519
>dbj|AK089921.1| Mus musculus B cells CRL-1669 BCL1 Clone 13.20-3B3 cDNA, RIKEN full-length enriched library, clone:G430003I24 product:branched chain ketoacid dehydrogenase E1, beta polypeptide, full insert sequence Length = 1479 Score = 67.9 bits (34), Expect = 9e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaa 564 ||||| |||||||||||||| || ||||| || || || ||||||||||||||||||||| Sbjct: 447 attgcggaaatccagtttgccgactatattttccctgcctttgatcagattgtcaacgaa 506 Query: 565 gc 566 || Sbjct: 507 gc 508
>emb|CR860263.1| Pongo pygmaeus mRNA; cDNA DKFZp459E175 (from clone DKFZp459E175) Length = 3552 Score = 67.9 bits (34), Expect = 9e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaa 564 ||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || ||| Sbjct: 453 attgcggaaattcagtttgcagattatattttccctgcatttgatcagattgttaatgaa 512 Query: 565 gc 566 || Sbjct: 513 gc 514
>emb|CR623511.1| full-length cDNA clone CS0DI006YE02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1482 Score = 67.9 bits (34), Expect = 9e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaa 564 ||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || ||| Sbjct: 479 attgcggaaattcagtttgcagattatattttccctgcatttgatcagattgttaatgaa 538 Query: 565 gc 566 || Sbjct: 539 gc 540
>emb|CR604591.1| full-length cDNA clone CS0DH006YA17 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1517 Score = 67.9 bits (34), Expect = 9e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaa 564 ||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || ||| Sbjct: 467 attgcggaaattcagtttgcagattatattttccctgcatttgatcagattgttaatgaa 526 Query: 565 gc 566 || Sbjct: 527 gc 528
>ref|NM_000056.2| Homo sapiens branched chain keto acid dehydrogenase E1, beta polypeptide (maple syrup urine disease) (BCKDHB), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA Length = 1552 Score = 67.9 bits (34), Expect = 9e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaa 564 ||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || ||| Sbjct: 477 attgcggaaattcagtttgcagattatattttccctgcatttgatcagattgttaatgaa 536 Query: 565 gc 566 || Sbjct: 537 gc 538
>ref|NM_183050.1| Homo sapiens branched chain keto acid dehydrogenase E1, beta polypeptide (maple syrup urine disease) (BCKDHB), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA Length = 3703 Score = 67.9 bits (34), Expect = 9e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaa 564 ||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || ||| Sbjct: 477 attgcggaaattcagtttgcagattatattttccctgcatttgatcagattgttaatgaa 536 Query: 565 gc 566 || Sbjct: 537 gc 538
>gb|AY888230.1| Synthetic construct Homo sapiens clone FLH020242.01X branched chain keto acid dehydrogenase E1 beta polypeptide (BCKDHB) mRNA, complete cds Length = 1179 Score = 67.9 bits (34), Expect = 9e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaa 564 ||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || ||| Sbjct: 430 attgcggaaattcagtttgcagattatattttccctgcatttgatcagattgttaatgaa 489 Query: 565 gc 566 || Sbjct: 490 gc 491
>gb|AY890820.1| Synthetic construct Homo sapiens clone FLH020237.01L branched chain keto acid dehydrogenase E1 beta polypeptide (BCKDHB) mRNA, partial cds Length = 1179 Score = 67.9 bits (34), Expect = 9e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaa 564 ||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || ||| Sbjct: 430 attgcggaaattcagtttgcagattatattttccctgcatttgatcagattgttaatgaa 489 Query: 565 gc 566 || Sbjct: 490 gc 491
>gb|U50708.1|HSU50708 Human branched chain alpha-ketoacid dehydrogenase E1 beta subunit mRNA, complete cds Length = 1551 Score = 67.9 bits (34), Expect = 9e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaa 564 ||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || ||| Sbjct: 477 attgcggaaattcagtttgcagattatattttccctgcatttgatcagattgttaatgaa 536 Query: 565 gc 566 || Sbjct: 537 gc 538
>emb|X52446.1|HSE1BBS Human mRNA for E1b-beta subunit of the branched-chain complex Length = 1412 Score = 67.9 bits (34), Expect = 9e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaa 564 ||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || ||| Sbjct: 373 attgcggaaattcagtttgcagattatattttccctgcatttgatcagattgttaatgaa 432 Query: 565 gc 566 || Sbjct: 433 gc 434
>gb|M55575.1|HUMBCKDHA Human branched chain alpha-keto acid dehydrogenase (BCKDHB) E1-beta subunit mRNA, complete cds Length = 1339 Score = 67.9 bits (34), Expect = 9e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaa 564 ||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || ||| Sbjct: 434 attgcggaaattcagtttgcagattatattttccctgcatttgatcagattgttaatgaa 493 Query: 565 gc 566 || Sbjct: 494 gc 495
>ref|XM_001032071.1| Tetrahymena thermophila SB210 2-oxoisovalerate dehydrogenase beta subunit, mitochondrial precursor, putative (TTHERM_00704010) mRNA, complete cds Length = 1251 Score = 65.9 bits (33), Expect = 4e-07 Identities = 96/117 (82%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaa 564 ||||||||||| || |||| |||||||| ||||| || |||||||| |||||||| ||| Sbjct: 502 attgctgaaattcaatttggtgattatatttttcctgcttttgatcaaattgtcaatgaa 561 Query: 565 gccgctaaattcagataccgaagtggaaatgaatttaactgtggaggtttaacaatt 621 || ||||||| ||||| || ||| ||| ||||| |||||||| |||||||||| Sbjct: 562 gctgctaaatacagatttagatctggtaattaatttgactgtggatctttaacaatt 618
>gb|CP000446.1| Shewanella sp. MR-4, complete genome Length = 4706287 Score = 65.9 bits (33), Expect = 4e-07 Identities = 78/93 (83%) Strand = Plus / Minus Query: 511 gaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaagccgct 570 ||||||||||| || ||||| |||||||||||||| ||||| || || ||||| | ||| Sbjct: 2414876 gaaatccagttcgccgattacatctttccagcattcgatcaaatagtgaacgagtctgct 2414817 Query: 571 aaattcagataccgaagtggaaatgaatttaac 603 |||||| | ||||| || || |||||||||||| Sbjct: 2414816 aaattccgttaccgcagcggtaatgaatttaac 2414784
>gb|CP000444.1| Shewanella sp. MR-7, complete genome Length = 4792610 Score = 63.9 bits (32), Expect = 1e-06 Identities = 77/92 (83%) Strand = Plus / Plus Query: 511 gaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaagccgct 570 ||||||||||| || ||||| ||||||||||| || ||||| || || ||||| | ||| Sbjct: 2299974 gaaatccagttcgccgattacatctttccagcgttcgatcaaatagtgaacgagtctgct 2300033 Query: 571 aaattcagataccgaagtggaaatgaatttaa 602 |||||| | ||||| ||||| ||||||||||| Sbjct: 2300034 aaattccgttaccgcagtggcaatgaatttaa 2300065
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 63.9 bits (32), Expect = 1e-06 Identities = 77/92 (83%) Strand = Plus / Minus Query: 511 gaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaagccgct 570 ||||| ||||||||||||||||| |||||||| ||||| || || ||||| ||| | ||| Sbjct: 1700482 gaaatacagtttgcagattatatatttccagcctttgaccaaatagtcaatgaatcagct 1700423 Query: 571 aaattcagataccgaagtggaaatgaatttaa 602 ||||| | ||||| ||||| ||||| ||||| Sbjct: 1700422 aaatttcgctaccgcagtggtaatgagtttaa 1700391
>gb|AY439374.1| Armigeres subalbatus ASAP ID: 40875 3-methyl-2-oxobutanoate dehydrogenase mRNA sequence Length = 543 Score = 60.0 bits (30), Expect = 2e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaa 564 |||||||| || ||| |||| |||||||| ||||| || |||||||||||||| |||||| Sbjct: 435 attgctgagatacagattgccgattatatttttccggcgtttgatcagattgtgaacgaa 494 Query: 565 gc 566 || Sbjct: 495 gc 496
>ref|XM_532213.2| PREDICTED: Canis familiaris similar to 2-oxoisovalerate dehydrogenase beta subunit, mitochondrial precursor (Branched-chain alpha-keto acid dehydrogenase E1 component beta chain) (BCKDH E1-beta) (LOC474978), mRNA Length = 1475 Score = 60.0 bits (30), Expect = 2e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaa 564 ||||| ||||| ||||||||||||||||| || || || |||||||||||||| || ||| Sbjct: 417 attgcagaaattcagtttgcagattatattttccctgcttttgatcagattgttaatgaa 476 Query: 565 gc 566 || Sbjct: 477 gc 478
>emb|CT033103.1| Platynereis dumerilii EST IB0AAA26DB02EM1 Length = 859 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcagat 554 ||||| || |||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 397 attgcagagatccagttcgcagattatatttttccagcgtttgatcagat 446
>ref|NM_059748.2| Caenorhabditis elegans Temporarily Assigned Gene name family member (tag-173) (tag-173) mRNA, complete cds Length = 1368 Score = 58.0 bits (29), Expect = 9e-05 Identities = 86/105 (81%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaa 564 |||||||| || ||||||| ||||| ||||| ||||| | ||||||| |||||||||| Sbjct: 354 attgctgagattcagtttggtgattacatcttcccagcttatgatcagcttgtcaacgag 413 Query: 565 gccgctaaattcagataccgaagtggaaatgaatttaactgtgga 609 || || || ||||||||||| |||||| ||||| |||||||| Sbjct: 414 gcagccaagttcagataccgttcgggaaatcaatttgactgtgga 458
>emb|BX815201.1|CNS0ABHL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS41ZC02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 414 Score = 58.0 bits (29), Expect = 9e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 1185 tgaacaattctacatgcccacaaagaacaagatcgtggatgctattaaagcaactgtaaa 1244 ||||| ||||||||||||||| ||||||||||| ||||||| || ||| | ||||| || Sbjct: 231 tgaaccattctacatgcccaccaagaacaagatattggatgcaatcaaatcgactgtgaa 290 Query: 1245 ttact 1249 ||||| Sbjct: 291 ttact 295
>ref|XM_001147465.1| PREDICTED: Pan troglodytes branched chain keto acid dehydrogenase E1, beta polypeptide, transcript variant 2 (BCKDHB), mRNA Length = 3634 Score = 56.0 bits (28), Expect = 4e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 511 gaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaagc 566 ||||| ||||| ||||||||||| || || ||||||||||||||||| || ||||| Sbjct: 439 gaaattcagttcgcagattatattttccctgcatttgatcagattgttaatgaagc 494
>ref|XM_001147388.1| PREDICTED: Pan troglodytes branched chain keto acid dehydrogenase E1, beta polypeptide, transcript variant 1 (BCKDHB), mRNA Length = 3590 Score = 56.0 bits (28), Expect = 4e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 511 gaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaagc 566 ||||| ||||| ||||||||||| || || ||||||||||||||||| || ||||| Sbjct: 395 gaaattcagttcgcagattatattttccctgcatttgatcagattgttaatgaagc 450
>ref|XM_518604.2| PREDICTED: Pan troglodytes branched chain keto acid dehydrogenase E1, beta polypeptide, transcript variant 5 (BCKDHB), mRNA Length = 3571 Score = 56.0 bits (28), Expect = 4e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 511 gaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaagc 566 ||||| ||||| ||||||||||| || || ||||||||||||||||| || ||||| Sbjct: 376 gaaattcagttcgcagattatattttccctgcatttgatcagattgttaatgaagc 431
>ref|XM_001147610.1| PREDICTED: Pan troglodytes branched chain keto acid dehydrogenase E1, beta polypeptide, transcript variant 4 (BCKDHB), mRNA Length = 3698 Score = 56.0 bits (28), Expect = 4e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 511 gaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaagc 566 ||||| ||||| ||||||||||| || || ||||||||||||||||| || ||||| Sbjct: 503 gaaattcagttcgcagattatattttccctgcatttgatcagattgttaatgaagc 558
>ref|XM_001147541.1| PREDICTED: Pan troglodytes branched chain keto acid dehydrogenase E1, beta polypeptide, transcript variant 3 (BCKDHB), mRNA Length = 3678 Score = 56.0 bits (28), Expect = 4e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 511 gaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaagc 566 ||||| ||||| ||||||||||| || || ||||||||||||||||| || ||||| Sbjct: 483 gaaattcagttcgcagattatattttccctgcatttgatcagattgttaatgaagc 538
>gb|BC118380.1| Bos taurus branched chain keto acid dehydrogenase E1, beta polypeptide (maple syrup urine disease), mRNA (cDNA clone MGC:140675 IMAGE:8273112), complete cds Length = 1531 Score = 56.0 bits (28), Expect = 4e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 511 gaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaagc 566 ||||| ||||||||||||||||| || || || |||||||||||||| || ||||| Sbjct: 449 gaaattcagtttgcagattatattttccctgcttttgatcagattgttaatgaagc 504
>ref|XM_001111198.1| PREDICTED: Macaca mulatta similar to 2-oxoisovalerate dehydrogenase beta subunit, mitochondrial precursor (Branched-chain alpha-keto acid dehydrogenase E1 component beta chain) (BCKDH E1-beta) (LOC718472), mRNA Length = 1366 Score = 56.0 bits (28), Expect = 4e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcag 552 ||||| ||||| ||||||||||||||||| || || |||||||||||| Sbjct: 470 attgcagaaattcagtttgcagattatattttccctgcatttgatcag 517
>emb|AL391595.14| Human DNA sequence from clone RP11-51I15 on chromosome 6 Contains the 5' part of the BCKDHB gene for branched chain keto acid dehydrogenase E1, beta polypeptide (maple syrup urine disease) and one CpG island, complete sequence Length = 119955 Score = 56.0 bits (28), Expect = 4e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcag 552 ||||| ||||| ||||||||||||||||| || || |||||||||||| Sbjct: 81236 attgcggaaattcagtttgcagattatattttccctgcatttgatcag 81283
>dbj|D90391.2| Homo sapiens gene for E-1-beta subunit of branched chain alpha-keto acid dehydrogenase, complete cds Length = 3650 Score = 56.0 bits (28), Expect = 4e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcag 552 ||||| ||||| ||||||||||||||||| || || |||||||||||| Sbjct: 1473 attgcggaaattcagtttgcagattatattttccctgcatttgatcag 1520
>gb|M81742.1|BOVAKDE1B Bovine branched chain alpha-keto acid dehydrogenase (BCKDHB) E1-beta subunit mRNA, partial cds Length = 1391 Score = 56.0 bits (28), Expect = 4e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 511 gaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaagc 566 ||||| ||||||||||||||||| || || || |||||||||||||| || ||||| Sbjct: 368 gaaattcagtttgcagattatattttccctgcttttgatcagattgttaatgaagc 423
>ref|NM_174507.2| Bos taurus branched chain keto acid dehydrogenase E1, beta polypeptide (maple syrup urine disease) (BCKDHB), mRNA gb|M33323.1|BOVBCKD Bos taurus branched-chain alpha-ketoacid dehydrogenase E(1) beta subunit precursor (BCKDH) mRNA, complete cds Length = 1668 Score = 56.0 bits (28), Expect = 4e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 511 gaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaagc 566 ||||| ||||||||||||||||| || || || |||||||||||||| || ||||| Sbjct: 622 gaaattcagtttgcagattatattttccctgcttttgatcagattgttaatgaagc 677
>dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MRP15 Length = 83287 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Minus Query: 574 ttcagataccgaagtggaaatgaatttaactgtggaggt 612 |||||||||||||||||||| | ||||||||||||||| Sbjct: 37579 ttcagataccgaagtggaaaccagtttaactgtggaggt 37541
>emb|BX816232.1|CNS0ABWJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH36ZB12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 651 Score = 54.0 bits (27), Expect = 0.001 Identities = 120/151 (79%) Strand = Plus / Plus Query: 706 aaggttgtcatacctcggagtccacgtgaggccaagggactgttgctggccagcattcgt 765 |||||||| || |||||||||||||| || || |||||||||||| || | | || ||| Sbjct: 13 aaggttgttatccctcggagtccacgagaagcaaagggactgttgttgtcatgtatccgt 72 Query: 766 gacccaaacccagtcatctttttcgagccaaagtggctgtaccgtttggctgttgaagaa 825 || ||||| || || | || ||||| |||||||||||||| ||| || || |||||| Sbjct: 73 gatccaaatcccgttgttttcttcgaaccaaagtggctgtatcgtcaagcagtagaagaa 132 Query: 826 gttcctgagggggactatatgctgcctttat 856 || |||||| ||||||||| | ||||||| Sbjct: 133 gtccctgagcatgactatatgatacctttat 163
>dbj|AK235778.1| Sus scrofa mRNA, clone:OVRM10114G02, expressed in ovary Length = 1568 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcagat 554 ||||| ||||| ||||||||||||||||| || || || ||||||||||| Sbjct: 513 attgcggaaattcagtttgcagattatattttccctgcttttgatcagat 562
>dbj|AK231418.1| Sus scrofa mRNA, clone:ITT010059E01, expressed in intestine Length = 1522 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatcagat 554 ||||| ||||| ||||||||||||||||| || || || ||||||||||| Sbjct: 460 attgcggaaattcagtttgcagattatattttccctgcttttgatcagat 509
>gb|AC093711.3| Sus scrofa clone RP44-453O1, complete sequence Length = 178791 Score = 52.0 bits (26), Expect = 0.006 Identities = 26/26 (100%) Strand = Plus / Minus Query: 70 gcagctgccggcctccccttcccctc 95 |||||||||||||||||||||||||| Sbjct: 18629 gcagctgccggcctccccttcccctc 18604
>ref|XM_807773.1| Trypanosoma cruzi strain CL Brener 2-oxoisovalerate dehydrogenase beta subunit, mitochondrial precursor (Tc00.1047053506295.160) partial mRNA Length = 1107 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 517 cagtttgcagattatatctttccagcatttgatcagattgtcaacgaagc 566 |||||||| ||||| || |||||||| |||||||||||||| || ||||| Sbjct: 376 cagtttgccgattacatatttccagcttttgatcagattgtaaatgaagc 425
>emb|BX842648.2| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 3/11 Length = 346416 Score = 52.0 bits (26), Expect = 0.006 Identities = 29/30 (96%) Strand = Plus / Plus Query: 508 gctgaaatccagtttgcagattatatcttt 537 ||||||||||||||||| |||||||||||| Sbjct: 225566 gctgaaatccagtttgccgattatatcttt 225595
>ref|XM_505015.1| Yarrowia lipolytica CLIB122, YALI0F05038g predicted mRNA Length = 1197 Score = 50.1 bits (25), Expect = 0.022 Identities = 43/49 (87%) Strand = Plus / Plus Query: 515 tccagtttgcagattatatctttccagcatttgatcagattgtcaacga 563 |||||||||||||||| | || || |||||||| |||||||||||||| Sbjct: 458 tccagtttgcagattacgtgttccccgcatttgaccagattgtcaacga 506
>gb|AC119894.5| Mus musculus chromosome 10, clone RP24-225G11, complete sequence Length = 227319 Score = 50.1 bits (25), Expect = 0.022 Identities = 25/25 (100%) Strand = Plus / Plus Query: 1309 ttatgtatgtatgtgtataagtgac 1333 ||||||||||||||||||||||||| Sbjct: 158483 ttatgtatgtatgtgtataagtgac 158507
>gb|AC113094.16| Mus musculus chromosome 10, clone RP23-311O24, complete sequence Length = 195634 Score = 50.1 bits (25), Expect = 0.022 Identities = 25/25 (100%) Strand = Plus / Plus Query: 1309 ttatgtatgtatgtgtataagtgac 1333 ||||||||||||||||||||||||| Sbjct: 16701 ttatgtatgtatgtgtataagtgac 16725
>gb|AC117193.3| Mus musculus BAC clone RP23-88I6 from 10, complete sequence Length = 136958 Score = 50.1 bits (25), Expect = 0.022 Identities = 25/25 (100%) Strand = Plus / Minus Query: 1309 ttatgtatgtatgtgtataagtgac 1333 ||||||||||||||||||||||||| Sbjct: 103120 ttatgtatgtatgtgtataagtgac 103096
>ref|XM_806999.1| Trypanosoma cruzi strain CL Brener 2-oxoisovalerate dehydrogenase beta subunit, mitochondrial precursor (Tc00.1047053511469.100) partial mRNA Length = 1107 Score = 50.1 bits (25), Expect = 0.022 Identities = 37/41 (90%) Strand = Plus / Plus Query: 517 cagtttgcagattatatctttccagcatttgatcagattgt 557 |||||||| ||||| || |||||||| |||||||||||||| Sbjct: 376 cagtttgccgattacatatttccagcttttgatcagattgt 416
>ref|XM_392824.2| PREDICTED: Apis mellifera similar to CG17691-PA.3 (LOC409306), mRNA Length = 1187 Score = 50.1 bits (25), Expect = 0.022 Identities = 67/81 (82%) Strand = Plus / Plus Query: 511 gaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaagccgct 570 ||||| || ||||| |||||||| ||||| || ||||||||| | || || ||||| || Sbjct: 444 gaaattcaatttgccgattatatatttcccgcttttgatcagttggtaaatgaagcggcg 503 Query: 571 aaattcagataccgaagtgga 591 ||| | ||||||||||||||| Sbjct: 504 aaaataagataccgaagtgga 524
>ref|XM_671764.1| Plasmodium berghei strain ANKA 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) (PB000202.00.0) partial mRNA Length = 1119 Score = 50.1 bits (25), Expect = 0.022 Identities = 43/49 (87%) Strand = Plus / Plus Query: 503 ctattgctgaaatccagtttgcagattatatctttccagcatttgatca 551 ||||||||||||| || |||| |||||||| |||||||| |||||||| Sbjct: 368 ctattgctgaaatacaatttggtgattatatatttccagcttttgatca 416
>ref|XM_718958.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03843) partial mRNA Length = 1116 Score = 50.1 bits (25), Expect = 0.022 Identities = 43/49 (87%) Strand = Plus / Plus Query: 503 ctattgctgaaatccagtttgcagattatatctttccagcatttgatca 551 ||||||||||||| || |||| |||||||| |||||||| |||||||| Sbjct: 365 ctattgctgaaatacaatttggtgattatatatttccagcttttgatca 413
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 50.1 bits (25), Expect = 0.022 Identities = 43/49 (87%) Strand = Plus / Minus Query: 515 tccagtttgcagattatatctttccagcatttgatcagattgtcaacga 563 |||||||||||||||| | || || |||||||| |||||||||||||| Sbjct: 762547 tccagtttgcagattacgtgttccccgcatttgaccagattgtcaacga 762499
>ref|XM_001227080.1| Chaetomium globosum CBS 148.51 conserved hypothetical protein (CHGG_09154) mRNA, complete cds Length = 1215 Score = 48.1 bits (24), Expect = 0.088 Identities = 24/24 (100%) Strand = Plus / Plus Query: 373 ttcggcggcgtcttccgctgcacg 396 |||||||||||||||||||||||| Sbjct: 325 ttcggcggcgtcttccgctgcacg 348
>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence Length = 1207381 Score = 48.1 bits (24), Expect = 0.088 Identities = 24/24 (100%) Strand = Plus / Plus Query: 372 tttcggcggcgtcttccgctgcac 395 |||||||||||||||||||||||| Sbjct: 502401 tttcggcggcgtcttccgctgcac 502424
>emb|CT009769.4| Mouse DNA sequence from clone RP23-44C21 on chromosome 9, complete sequence Length = 197074 Score = 48.1 bits (24), Expect = 0.088 Identities = 45/52 (86%) Strand = Plus / Plus Query: 501 agctattgctgaaatccagtttgcagattatatctttccagcatttgatcag 552 ||||||||| |||||||||||||| || ||||| || || || ||||||||| Sbjct: 29227 agctattgcggaaatccagtttgccgactatattttccctgcctttgatcag 29278
>gb|AE009709.1| Brucella melitensis 16M chromosome II, section 71 of 107 of the complete sequence Length = 11355 Score = 48.1 bits (24), Expect = 0.088 Identities = 24/24 (100%) Strand = Plus / Minus Query: 372 tttcggcggcgtcttccgctgcac 395 |||||||||||||||||||||||| Sbjct: 7259 tttcggcggcgtcttccgctgcac 7236
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 48.1 bits (24), Expect = 0.088 Identities = 24/24 (100%) Strand = Plus / Minus Query: 373 ttcggcggcgtcttccgctgcacg 396 |||||||||||||||||||||||| Sbjct: 3557676 ttcggcggcgtcttccgctgcacg 3557653
>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence Length = 1162204 Score = 48.1 bits (24), Expect = 0.088 Identities = 24/24 (100%) Strand = Plus / Minus Query: 372 tttcggcggcgtcttccgctgcac 395 |||||||||||||||||||||||| Sbjct: 712679 tttcggcggcgtcttccgctgcac 712656
>dbj|AK114487.1| Ciona intestinalis cDNA, clone:cieg003p04, full insert sequence Length = 1734 Score = 48.1 bits (24), Expect = 0.088 Identities = 48/56 (85%) Strand = Plus / Plus Query: 511 gaaatccagtttgcagattatatctttccagcatttgatcagattgtcaacgaagc 566 |||||||||||||| |||||||| | ||||| ||||| |||||||| || ||||| Sbjct: 394 gaaatccagtttgctgattatattctgccagcttttgaccagattgtaaatgaagc 449
>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence, strain 2308 Length = 1156948 Score = 48.1 bits (24), Expect = 0.088 Identities = 24/24 (100%) Strand = Plus / Minus Query: 372 tttcggcggcgtcttccgctgcac 395 |||||||||||||||||||||||| Sbjct: 712667 tttcggcggcgtcttccgctgcac 712644
>gb|AC156638.2| Mus musculus BAC clone RP24-255L24 from chromosome 9, complete sequence Length = 162792 Score = 48.1 bits (24), Expect = 0.088 Identities = 45/52 (86%) Strand = Plus / Minus Query: 501 agctattgctgaaatccagtttgcagattatatctttccagcatttgatcag 552 ||||||||| |||||||||||||| || ||||| || || || ||||||||| Sbjct: 3181 agctattgcggaaatccagtttgccgactatattttccctgcctttgatcag 3130
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 46.1 bits (23), Expect = 0.35 Identities = 32/35 (91%) Strand = Plus / Minus Query: 532 atctttccagcatttgatcagattgtcaacgaagc 566 ||||||||||| ||||| |||||||| |||||||| Sbjct: 18322 atctttccagcctttgaccagattgtgaacgaagc 18288
>gb|AC012391.10| Homo sapiens chromosome 10 clone RP11-162A23, complete sequence Length = 181948 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1302 actgccattatgtatgtatgtgt 1324 ||||||||||||||||||||||| Sbjct: 170843 actgccattatgtatgtatgtgt 170865
>gb|AC092859.26| Pan troglodytes clone rp43-111m15, complete sequence Length = 175281 Score = 46.1 bits (23), Expect = 0.35 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1308 attatgtatgtatgtgtataagtgactatat 1338 |||||||||||||||||||| |||| ||||| Sbjct: 123191 attatgtatgtatgtgtatatgtgaatatat 123161
>ref|XM_838023.1| Leishmania major strain Friedlin 2-oxoisovalerate dehydrogenase beta subunit, mitochondrial precursor (LMJ_0939) partial mRNA Length = 1101 Score = 46.1 bits (23), Expect = 0.35 Identities = 32/35 (91%) Strand = Plus / Plus Query: 532 atctttccagcatttgatcagattgtcaacgaagc 566 ||||||||||| ||||| |||||||| |||||||| Sbjct: 388 atctttccagcctttgaccagattgtgaacgaagc 422
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 46.1 bits (23), Expect = 0.35 Identities = 41/47 (87%) Strand = Plus / Minus Query: 511 gaaatccagtttgcagattatatctttccagcatttgatcagattgt 557 |||||||||||||| ||||| |||||||| || || || |||||||| Sbjct: 3830465 gaaatccagtttgcggattacatctttcccgctttcgaccagattgt 3830419
>ref|XM_739783.1| Plasmodium chabaudi chabaudi 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) (PC000864.02.0) partial mRNA Length = 1119 Score = 46.1 bits (23), Expect = 0.35 Identities = 41/47 (87%) Strand = Plus / Plus Query: 505 attgctgaaatccagtttgcagattatatctttccagcatttgatca 551 ||||||||||| || |||| |||||||| |||||||| |||||||| Sbjct: 370 attgctgaaatacaatttggtgattatatatttccagcttttgatca 416
>emb|CT025554.24| Mouse DNA sequence from clone RP23-469A12 on chromosome 14, complete sequence Length = 203280 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1307 cattatgtatgtatgtgtataa 1328 |||||||||||||||||||||| Sbjct: 182944 cattatgtatgtatgtgtataa 182965
>gb|AC171137.2| Helobdella robusta clone CH306-1A8, complete sequence Length = 115977 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1307 cattatgtatgtatgtgtataa 1328 |||||||||||||||||||||| Sbjct: 46473 cattatgtatgtatgtgtataa 46452
>emb|CT033761.14| Mouse DNA sequence from clone RP23-203P12 on chromosome 9, complete sequence Length = 208050 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 505 attgctgaaatccagtttgcagatta 530 ||||||||||| |||||||||||||| Sbjct: 125113 attgctgaaattcagtttgcagatta 125088
>gb|AC134870.4| Mus musculus BAC clone RP23-166E8 from chromosome 7, complete sequence Length = 165349 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1310 tatgtatgtatgtgtataagtg 1331 |||||||||||||||||||||| Sbjct: 68829 tatgtatgtatgtgtataagtg 68850
>gb|AC110822.6| Mus musculus BAC clone RP24-226H7 from chromosome 9, complete sequence Length = 144131 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 505 attgctgaaatccagtttgcagatta 530 ||||||||||| |||||||||||||| Sbjct: 71201 attgctgaaattcagtttgcagatta 71176
>gb|AE014175.1| Mus musculus piebald deletion region section 3 of 11 of the complete sequence Length = 404829 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1307 cattatgtatgtatgtgtataa 1328 |||||||||||||||||||||| Sbjct: 264742 cattatgtatgtatgtgtataa 264763
>gb|AC116310.2| Homo sapiens chromosome 5 clone RP11-203E6, complete sequence Length = 149704 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 152 gggaggtggtggggaggaggag 173 |||||||||||||||||||||| Sbjct: 110516 gggaggtggtggggaggaggag 110495
>gb|AC093289.2| Homo sapiens chromosome 5 clone RP11-473L15, complete sequence Length = 159956 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 152 gggaggtggtggggaggaggag 173 |||||||||||||||||||||| Sbjct: 124644 gggaggtggtggggaggaggag 124665
>gb|AC114410.9| Mus musculus chromosome 14, clone RP23-151K8, complete sequence Length = 201783 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1307 cattatgtatgtatgtgtataa 1328 |||||||||||||||||||||| Sbjct: 136499 cattatgtatgtatgtgtataa 136520
>dbj|AP003382.3| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2011J21, complete sequence Length = 113284 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1306 ccattatgtatgtatgtgtata 1327 |||||||||||||||||||||| Sbjct: 86495 ccattatgtatgtatgtgtata 86474
>gb|CP000183.2| Drosophila melanogaster genomic scaffold 211000022280458 Length = 218545 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1387 taacaccaataaaatatttaa 1407 ||||||||||||||||||||| Sbjct: 133437 taacaccaataaaatatttaa 133417
>ref|NM_153813.2| Homo sapiens zinc finger protein, multitype 1 (ZFPM1), mRNA Length = 3241 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 ggccgcttccgcttccgcttc 121 ||||||||||||||||||||| Sbjct: 2368 ggccgcttccgcttccgcttc 2348
>ref|XR_014636.1| PREDICTED: Macaca mulatta similar to friend of GATA-1 (LOC721607), partial mRNA Length = 1263 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 ggccgcttccgcttccgcttc 121 ||||||||||||||||||||| Sbjct: 913 ggccgcttccgcttccgcttc 893
>gb|AC132886.18| Mus musculus chromosome 13, clone RP24-267I21, complete sequence Length = 184315 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1163 acacccctttcccacttgtttatga 1187 ||||||||||||||||| ||||||| Sbjct: 26939 acacccctttcccacttatttatga 26915
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1073 caggagggtttggtgcagaaa 1093 ||||||||||||||||||||| Sbjct: 717984 caggagggtttggtgcagaaa 717964
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 ctcgacaccgacccgcgctcttacg 352 |||||||||||||||||||| |||| Sbjct: 2732548 ctcgacaccgacccgcgctcctacg 2732572
>gb|AC116552.2| Homo sapiens chromosome 16 clone RP11-21B21, complete sequence Length = 176797 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 ggccgcttccgcttccgcttc 121 ||||||||||||||||||||| Sbjct: 132287 ggccgcttccgcttccgcttc 132307
>gb|AC133171.5| Mus musculus BAC clone RP24-271D14 from chromosome 18, complete sequence Length = 126873 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1310 tatgtatgtatgtgtataagt 1330 ||||||||||||||||||||| Sbjct: 120526 tatgtatgtatgtgtataagt 120546
>gb|CP000136.1| Rhizobium etli CFN 42 plasmid p42c, complete sequence Length = 250948 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 372 tttcggcggcgtcttccgctg 392 ||||||||||||||||||||| Sbjct: 71666 tttcggcggcgtcttccgctg 71686
>gb|AC090525.8| Homo sapiens 12 BAC RP11-73B8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174576 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 672 accagaggctttcttctgcca 692 ||||||||||||||||||||| Sbjct: 138542 accagaggctttcttctgcca 138522
>gb|AC099617.13| Mus musculus chromosome 15, clone RP23-445J4, complete sequence Length = 180493 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 tggccacgagagctttaaggg 154 ||||||||||||||||||||| Sbjct: 105715 tggccacgagagctttaaggg 105695
>gb|AC109341.7| Homo sapiens chromosome 11, clone CTD-2504M7, complete sequence Length = 202761 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1308 attatgtatgtatgtgtataa 1328 ||||||||||||||||||||| Sbjct: 26770 attatgtatgtatgtgtataa 26750
>gb|AC116156.3| Homo sapiens chromosome 11, clone RP11-44D14, complete sequence Length = 176597 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1308 attatgtatgtatgtgtataa 1328 ||||||||||||||||||||| Sbjct: 114135 attatgtatgtatgtgtataa 114115
>emb|CR387978.12| Zebrafish DNA sequence from clone DKEY-33M5 in linkage group 1, complete sequence Length = 208746 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 ggtggtggggaggaggagggt 176 ||||||||||||||||||||| Sbjct: 136587 ggtggtggggaggaggagggt 136607
>gb|AC063944.25| Homo sapiens 3 BAC RP11-446H18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180389 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1310 tatgtatgtatgtgtataagt 1330 ||||||||||||||||||||| Sbjct: 43755 tatgtatgtatgtgtataagt 43775
>emb|CR693364.2|CNS0FXY8 Tetraodon nigroviridis full-length cDNA Length = 1362 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 930 acaagcatgtgaagatgcttc 950 ||||||||||||||||||||| Sbjct: 846 acaagcatgtgaagatgcttc 866
>gb|AC026467.6| Homo sapiens chromosome 16 clone RP11-410M9, complete sequence Length = 148054 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 ggccgcttccgcttccgcttc 121 ||||||||||||||||||||| Sbjct: 9216 ggccgcttccgcttccgcttc 9236
>emb|BX004827.18| Human DNA sequence from clone RP13-391G2 on chromosome X Contains the SHOX gene for short stature homeobox and seven CpG islands, complete sequence Length = 119555 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1307 cattatgtatgtatgtgtata 1327 ||||||||||||||||||||| Sbjct: 55665 cattatgtatgtatgtgtata 55645
>emb|BX293560.3| Human DNA sequence from clone RP11-40F8 on chromosome X Contains a novel gene and the 3' end of a novel gene, complete sequence Length = 155656 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 795 aaagtggctgtaccgtttggc 815 ||||||||||||||||||||| Sbjct: 47066 aaagtggctgtaccgtttggc 47086
>emb|AL162417.23| Human DNA sequence from clone RP11-326L24 on chromosome 9q34.13-34.3 Contains the GTF3C5 gene for general transcription factor IIIC polypeptide 5 63kDa, the CEL gene for carboxyl ester lipase (bile salt-stimulated lipase), the CELP gene for carboxyl ester lipase pseudogene, the RALGDS gene for ral guanine nucleotide dissociation stimulator, the gene for Forssman glycolipid synthetase (FS), three novel genes and six CpG islands, complete sequence Length = 152863 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 793 ccaaagtggctgtaccgtttg 813 ||||||||||||||||||||| Sbjct: 53241 ccaaagtggctgtaccgtttg 53221
>gb|AC153020.5| Mus musculus BAC clone RP23-88P1 from chromosome 13, complete sequence Length = 200635 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 424 cagagagtattcaatacgcca 444 ||||||||||||||||||||| Sbjct: 143351 cagagagtattcaatacgcca 143371
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 ggccgcttccgcttccgcttc 121 ||||||||||||||||||||| Sbjct: 175098 ggccgcttccgcttccgcttc 175078
>emb|AL772364.20| Mouse DNA sequence from clone RP23-242C19 on chromosome 11 Contains a ribosomal protein S16 (Rps16) pseudogene, the B3gnt1 gene for beta-1,3-N-acetylglucosaminyltransferase 1, the Murr1 gene for U2af1-rs1 region 1, the U2af1-rs1 gene for U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 (related sequence 1) and two CpG islands, complete sequence Length = 210863 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 gaggtggtggggaggaggagg 174 ||||||||||||||||||||| Sbjct: 152782 gaggtggtggggaggaggagg 152802
>emb|BX950186.10| Zebrafish DNA sequence from clone CH211-103O18 in linkage group 15, complete sequence Length = 140307 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1386 ataacaccaataaaatattta 1406 ||||||||||||||||||||| Sbjct: 72984 ataacaccaataaaatattta 72964
>gb|AC126425.2| Lemur catta, clone -162D1, complete sequence Length = 154718 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1307 cattatgtatgtatgtgtata 1327 ||||||||||||||||||||| Sbjct: 143640 cattatgtatgtatgtgtata 143620
>gb|AC105383.3| Homo sapiens BAC clone RP11-9G1 from 4, complete sequence Length = 173956 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1308 attatgtatgtatgtgtataa 1328 ||||||||||||||||||||| Sbjct: 84160 attatgtatgtatgtgtataa 84180
>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome Length = 1738505 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 939 tgaagatgcttcaaaggatggaatt 963 |||||||||| |||||||||||||| Sbjct: 875661 tgaagatgctgcaaaggatggaatt 875637
>emb|BX470266.10| Zebrafish DNA sequence from clone DKEYP-9D4 in linkage group 1, complete sequence Length = 194021 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 ggtggtggggaggaggagggt 176 ||||||||||||||||||||| Sbjct: 61633 ggtggtggggaggaggagggt 61653
>gb|AC121609.3| Mus musculus BAC clone RP23-320N4 from chromosome 15, complete sequence Length = 195165 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 tggccacgagagctttaaggg 154 ||||||||||||||||||||| Sbjct: 172811 tggccacgagagctttaaggg 172791
>gb|AC009482.4| Homo sapiens BAC clone RP11-303F17 from 2, complete sequence Length = 109582 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1310 tatgtatgtatgtgtataagt 1330 ||||||||||||||||||||| Sbjct: 102353 tatgtatgtatgtgtataagt 102373
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 372 tttcggcggcgtcttccgctgcacg 396 |||||||||||| |||||||||||| Sbjct: 6978266 tttcggcggcgtgttccgctgcacg 6978290
>gb|AC073912.38| Homo sapiens 12 BAC RP11-989F5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 211550 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 793 ccaaagtggctgtaccgtttg 813 ||||||||||||||||||||| Sbjct: 185789 ccaaagtggctgtaccgtttg 185809
>dbj|AP006652.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT30M07, TM0331c, complete sequence Length = 56699 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1388 aacaccaataaaatatttaag 1408 ||||||||||||||||||||| Sbjct: 46968 aacaccaataaaatatttaag 46948
>gb|AF488691.1| Homo sapiens friend of GATA-1 (FOG1) mRNA, complete cds Length = 3339 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 ggccgcttccgcttccgcttc 121 ||||||||||||||||||||| Sbjct: 2651 ggccgcttccgcttccgcttc 2631
>gb|AC137591.1| Homo sapiens chromosome X clone XX-B6cos map Xp22-PAR, complete sequence Length = 32799 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1307 cattatgtatgtatgtgtata 1327 ||||||||||||||||||||| Sbjct: 8872 cattatgtatgtatgtgtata 8852
>ref|XM_567718.1| Cryptococcus neoformans var. neoformans JEC21 protein kinase (CNK02470) partial mRNA Length = 3787 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1073 caggagggtttggtgcagaaa 1093 ||||||||||||||||||||| Sbjct: 3038 caggagggtttggtgcagaaa 3058
>gb|AC061957.3|F22L4 Sequence of BAC F22L4 from Arabidopsis thaliana chromosome 1, complete sequence Length = 66131 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1310 tatgtatgtatgtgtataagt 1330 ||||||||||||||||||||| Sbjct: 55949 tatgtatgtatgtgtataagt 55929
>dbj|AP004489.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT04I02, TM0021, complete sequence Length = 83700 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1388 aacaccaataaaatatttaag 1408 ||||||||||||||||||||| Sbjct: 1584 aacaccaataaaatatttaag 1564
>gb|AC123682.13| Mus musculus chromosome 15, clone RP23-288J22, complete sequence Length = 170303 Score = 42.1 bits (21), Expect = 5.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 531 tatctttccagcatttgatcagattgtca 559 ||||||| ||||||||||| ||||||||| Sbjct: 33048 tatctttgcagcatttgataagattgtca 33020
>emb|Y09581.1|ATFROHABG Arabidopsis thaliana FRO1 and FRO2 genes Length = 15202 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1310 tatgtatgtatgtgtataagt 1330 ||||||||||||||||||||| Sbjct: 10653 tatgtatgtatgtgtataagt 10633
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 372 tttcggcggcgtcttccgctgcacg 396 |||||||||||| |||||||||||| Sbjct: 2821348 tttcggcggcgtgttccgctgcacg 2821324
>gb|AF072711.1|AF072711 Homo sapiens carboxyl ester lipase gene, complete cds; and carboxyl ester lipase pseudogene, complete sequence Length = 30847 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 793 ccaaagtggctgtaccgtttg 813 ||||||||||||||||||||| Sbjct: 17162 ccaaagtggctgtaccgtttg 17142
>gb|AC139381.4| Mus musculus BAC clone RP23-171D1 from 13, complete sequence Length = 242105 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 424 cagagagtattcaatacgcca 444 ||||||||||||||||||||| Sbjct: 41417 cagagagtattcaatacgcca 41437
>gb|AC150274.2| Mus musculus BAC clone RP23-348G11 from 18, complete sequence Length = 194318 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1310 tatgtatgtatgtgtataagt 1330 ||||||||||||||||||||| Sbjct: 50400 tatgtatgtatgtgtataagt 50420
>gb|AC002097.1|AC002097 Homo sapiens chromosome 9q34, clone 246H5, complete sequence Length = 20554 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 793 ccaaagtggctgtaccgtttg 813 ||||||||||||||||||||| Sbjct: 12259 ccaaagtggctgtaccgtttg 12239
>emb|AL831723.8| Mouse DNA sequence from clone RP23-100C7 on chromosome 4, complete sequence Length = 171424 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1307 cattatgtatgtatgtgtata 1327 ||||||||||||||||||||| Sbjct: 112905 cattatgtatgtatgtgtata 112925
>gb|AC131574.4| Homo sapiens chromosome 11, clone RP11-957H15, complete sequence Length = 166214 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1308 attatgtatgtatgtgtataa 1328 ||||||||||||||||||||| Sbjct: 129362 attatgtatgtatgtgtataa 129342 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 230,778,766 Number of extensions: 13391960 Number of successful extensions: 363846 Number of sequences better than 10.0: 152 Number of HSP's gapped: 363838 Number of HSP's successfully gapped: 195 Length of query: 1425 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1402 Effective length of database: 18,503,978,556 Effective search space: 25942577935512 Effective search space used: 25942577935512 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
