ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf170o20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009456.1| Triticum aestivum clone wlp1c.pk006.j5:fis, full insert mRNA sequence Length = 1627 Score = 2593 bits (1308), Expect = 0.0 Identities = 1489/1548 (96%), Gaps = 6/1548 (0%) Strand = Plus / Plus Query: 58 tggtccgggggcgggcatccatggactcttcctccgaggcgccgctgctgctcagcaggg 117 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36 tggtccgggggcgggcatccatggactcttcctccgaggcgccgctgctgctcagcaggg 95 Query: 118 ggaacagtcacaaggaggtgccccatgaggcgggaggcaagcggcagcggtggtggaggg 177 ||||| ||||||||||||||| ||| ||||||||||||||||| | |||||||||| Sbjct: 96 ggaacgagcacaaggaggtgcccgatgtggcgggaggcaagcggccg---tggtggaggg 152 Query: 178 aggcggcggaggagtccggccggctggctgcgctggctgcgccgatgatcgctgtggcgc 237 |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 153 aggcggcggaggagtccggccggctggccgcgctggctgcgccgatgatcgcggtggcgc 212 Query: 238 tgctgcagctgatgatgcagctcatctccaccgtcatggtggggcacctcggcgaggtcg 297 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 tgctgcagctgttgatgcagctcatctccaccgtcatggtggggcacctcggcgaggtcg 272 Query: 298 cgcttgcgggcgccgccatcgccaactccctcaccaacgtctccggtttcagcgtcctca 357 |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 273 cgctcgctggcgccgccatcgccaactccctcaccaacgtctccggcttcagcgtcctca 332 Query: 358 taggactggcatgcggattggaaactatttgtgggcaggcctatggagcagaacagtatc 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 333 taggactggcatgcggattggaaactatttgtgggcaggcctatggagcagaacagtatc 392 Query: 418 ataagttatccttatatacctacaggtccatcattgtacttcttattgtgagtgtgccca 477 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 ataagttatccttgtatgcctacaggtccatcattgtacttcttattgtgagtgtgccca 452 Query: 478 tcgccattgtatgggttttcattccggaagtacttcctctcataggtcagcaaccagaaa 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 tcgccattgtatgggttttcattccggaagtacttcctctcataggtcagcaaccagaaa 512 Query: 538 ttgcaaatgaggctgggaaatatgcattatggcttatccctggtttatttgccttcagtg 597 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 513 ttgcaaatgaggctgggaaatatgcattgtggcttatccctggtttatttgccttcagtg 572 Query: 598 ttgctcaatgcttttcaaagtttctgcagtgtcagagcctcatctttcctatggttctta 657 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 ttgctcaatgcttttcaaagtttctgcagtgtcagagcctcatctttcctatggttctta 632 Query: 658 gctccatgatcacactcgctgtatttattcctctgtgttggttcatggtttataaagttg 717 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 633 gctccatgatcacactcgctgtatttattcctctgtgttggttcctggtttataaagttg 692 Query: 718 gtatgggtaatgctggagctgctttatccgtcagcatctgcgattgggttgaagtgattg 777 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 693 gtatgggtaatgttggagctgctttatccgtcagcatctgcgattgggttgaagtgactg 752 Query: 778 tccttggtctttacattaagttctcgccttcttgtgagaaaacacgtgctccactcacgt 837 | |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 753 ttcttggtctttacatcaagttctcaccttcttgtgagaaaacacgtgctccactcacgt 812 Query: 838 gggaagcttttaaaggaattggcagtttcatgcgtttggctgtaccgtcggctcttatga 897 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 gggaagcttttaaaggaattggcagtttcatgcgtttggctgtaccgtcggctcttatga 872 Query: 898 tttgccttgagtggtggtcttacgagctgcttgttctgctttctgggatcttaccaaatc 957 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 873 tttgccttgaatggtggtcttacgagctgcttgttctgctttctgggatcttaccaaatc 932 Query: 958 cagcacttgaaacttctgtgctttctatatgcatatctacagtggtactgttgtacaatc 1017 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 933 cagcacttgaaacttctgtgctttctatatgcatatctacagtggtgctgttgtacaatc 992 Query: 1018 ttccttacggtattggaacagctgcaagtgttcgtgtctcgaatgaactaggtgctggca 1077 ||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||| Sbjct: 993 ttccttacggtattggaacagctgcaagtgtgcgcgtctcaaatgaactaggtgctggca 1052 Query: 1078 acccagaaggtgcccgcttggtggtaggtgttgctttgtctattgtagtttgttcagcag 1137 ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1053 acccagaaggtgctcgcttggtggtaggtgttgctttgtcgattgtagtttgttcagcaa 1112 Query: 1138 cactggtgagcacaactcttctcgcatcgcgtcacttcattggaattgcattcagcaatg 1197 |||||||||||| ||||||| || ||| |||||||||||||||||||||||||| | Sbjct: 1113 tcctggtgagcacagctcttctagccctgcgccacttcattggaattgcattcagcaacg 1172 Query: 1198 aggaggaggttatagattatgtcaccagaatggtgcccgtactttccatttcagttatta 1257 ||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 1173 aggaggaggttgtagattatgtcaccagaatggtacccgtactttccatttcagtcatta 1232 Query: 1258 cagacagcctccaaggagtcctttcaggtgtttctcggggctgtggatggcagcatttag 1317 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1233 cagacagcttccaaggagtcctttcaggtgtttctcggggctgtggatggcagcatttag 1292 Query: 1318 gcgcgtacgttaacctgggtgcattctatcttgttgggattccagttgcactcttttttg 1377 |||| || || ||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 1293 gcgcatatgtcaacctgggtgcattctatcttgttgggatccccgttgcactcttttttg 1352 Query: 1378 gttttacaatgcaactaagaggaatgggattttggattggcatgatagctggtggagcta 1437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1353 gttttacaatgcaactaagaggaatgggattttggattggcatgatagctggtggagcca 1412 Query: 1438 cacaggtcactctcctatctgtgataactgctactacaaaatgggacaagatggccgaca 1497 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 1413 cacaggtcactctcctatctgtgataactgccactacaaaatgggacaagatggctgaca 1472 Query: 1498 aggctaaggagagagtatttgaagacaggcttccaacacaacaataagacttgaagaact 1557 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1473 aggctaaggagagagtatttgaagacaggcttccaac---acaataagacttgaagaact 1529 Query: 1558 gccatgtcaaaattttgatgagctaaagaatgagagaattctaattac 1605 |||||||||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 1530 gccatgtcaaaattttgaagagctaaataatcagagaattctaattac 1577
>ref|NM_001049678.1| Oryza sativa (japonica cultivar-group) Os01g0504500 (Os01g0504500) mRNA, complete cds Length = 1781 Score = 1277 bits (644), Expect = 0.0 Identities = 1190/1372 (86%) Strand = Plus / Plus Query: 166 ggtggtggagggaggcggcggaggagtccggccggctggctgcgctggctgcgccgatga 225 |||||||| |||||||| | | |||| |||| ||||||| ||||||| |||||||||| Sbjct: 165 ggtggtggcgggaggcgactgcggaggccgggaggctggcgtcgctggccgcgccgatga 224 Query: 226 tcgctgtggcgctgctgcagctgatgatgcagctcatctccaccgtcatggtggggcacc 285 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 tcgcggtcgcgctgctgcagctgatgatgcagctcatctccaccgtcatggtggggcacc 284 Query: 286 tcggcgaggtcgcgcttgcgggcgccgccatcgccaactccctcaccaacgtctccggtt 345 |||||||||||||||| || |||||||| ||||||||||||||||||||||||||||| | Sbjct: 285 tcggcgaggtcgcgctcgccggcgccgctatcgccaactccctcaccaacgtctccggct 344 Query: 346 tcagcgtcctcataggactggcatgcggattggaaactatttgtgggcaggcctatggag 405 ||||||||||||| ||||||||||| || ||||||||||||| || ||||| ||||||| Sbjct: 345 tcagcgtcctcatgggactggcatgtgggctggaaactatttgcggacaggcttatggag 404 Query: 406 cagaacagtatcataagttatccttatatacctacaggtccatcattgtacttcttattg 465 ||||||||||||||||| || | ||||||| ||||||||||| ||||| |||||| ||| Sbjct: 405 cagaacagtatcataagctagctttatatatgtacaggtccataattgtgcttcttgttg 464 Query: 466 tgagtgtgcccatcgccattgtatgggttttcattccggaagtacttcctctcataggtc 525 ||||||| || |||||||| ||||||||||||| || || ||||||||||||||||||| Sbjct: 465 tgagtgtaccaatcgccatcatatgggttttcatcccagaggtacttcctctcataggtc 524 Query: 526 agcaaccagaaattgcaaatgaggctgggaaatatgcattatggcttatccctggtttat 585 ||||||||||||| |||| ||| | |||||| |||||||| ||||| ||||||||||||| Sbjct: 525 agcaaccagaaatagcaagtgaagttgggaagtatgcattgtggctaatccctggtttat 584 Query: 586 ttgccttcagtgttgctcaatgcttttcaaagtttctgcagtgtcagagcctcatctttc 645 ||||||||| ||||||||||||||| |||||||| || ||| ||| ||||| || |||| Sbjct: 585 ttgccttcactgttgctcaatgcttatcaaagttcctccagactcaaagcctaatatttc 644 Query: 646 ctatggttcttagctccatgatcacactcgctgtatttattcctctgtgttggttcatgg 705 |||||||||| ||||| || ||||| || | || |||||| ||||||||||||||| Sbjct: 645 ctatggttctaagctcatcaataacactagcactcttcattcctttgtgttggttcatgg 704 Query: 706 tttataaagttggtatgggtaatgctggagctgctttatccgtcagcatctgcgattggg 765 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 705 tttataaagttgggatgggtaatgctggagctgctttatcagtcagtatctgtgattggg 764 Query: 766 ttgaagtgattgtccttggtctttacattaagttctcgccttcttgtgagaaaacacgtg 825 | ||||||| ||| ||||||||||||||| |||| ||||||||||| ||||| |||| Sbjct: 765 tcgaagtgactgttcttggtctttacattgttctctcaccttcttgtgaaaaaactcgtg 824 Query: 826 ctccactcacgtgggaagcttttaaaggaattggcagtttcatgcgtttggctgtaccgt 885 |||||||||| |||||||| |||| || ||||| |||||| || | ||||||||||| | Sbjct: 825 ctccactcacatgggaagcatttagtgggattggaagtttcttgaggttggctgtaccat 884 Query: 886 cggctcttatgatttgccttgagtggtggtcttacgagctgcttgttctgctttctggga 945 |||| || ||||||||||| || ||||||||||| ||||||||||||||||||||||||| Sbjct: 885 cggccctcatgatttgcctcgaatggtggtcttatgagctgcttgttctgctttctggga 944 Query: 946 tcttaccaaatccagcacttgaaacttctgtgctttctatatgcatatctacagtggtac 1005 || ||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 945 tcctaccaaatccagcacttgaaacttctgtgctttctatatgcatttctactgttgtgt 1004 Query: 1006 tgttgtacaatcttccttacggtattggaacagctgcaagtgttcgtgtctcgaatgaac 1065 || |||||||||| ||| | ||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1005 tggtgtacaatctccctcatggtattggaacagctgcaagtgtccgtgtctcaaatgaac 1064 Query: 1066 taggtgctggcaacccagaaggtgcccgcttggtggtaggtgttgctttgtctattgtag 1125 ||||||| || || |||||||||||||||||||| ||||| |||||||| ||| || || Sbjct: 1065 taggtgcagggaatccagaaggtgcccgcttggtagtaggggttgctttatctgttatac 1124 Query: 1126 tttgttcagcagcactggtgagcacaactcttctcgcatcgcgtcacttcattggaattg 1185 |||||||||||| || ||||| ||| ||||| || | |||||| ||||| ||||||| Sbjct: 1125 tttgttcagcagtcctagtgagtgtaacacttctagcgttgcgtcatttcatcggaattg 1184 Query: 1186 cattcagcaatgaggaggaggttatagattatgtcaccagaatggtgcccgtactttcca 1245 | |||||||||||||| || || ||| ||||||| || |||||||| || || ||||||| Sbjct: 1185 ctttcagcaatgaggaagaagtcataaattatgtaacaagaatggtacctgttctttcca 1244 Query: 1246 tttcagttattacagacagcctccaaggagtcctttcaggtgtttctcggggctgtggat 1305 | |||||||||||||||||||| || || ||||| ||||||||||| |||||||||||| Sbjct: 1245 tctcagttattacagacagccttcagggtgtcctctcaggtgtttccaggggctgtggat 1304 Query: 1306 ggcagcatttaggcgcgtacgttaacctgggtgcattctatcttgttgggattccagttg 1365 |||||||| |||| || || |||||||| ||||||||||||||||| || |||| |||| Sbjct: 1305 ggcagcatctaggggcctatgttaacctaggtgcattctatcttgtcggagttcctgttg 1364 Query: 1366 cactcttttttggttttacaatgcaactaagaggaatgggattttggattggcatgatag 1425 | ||||||||||| ||| ||||||| ||| |||||||||| |||||||| |||||| ||| Sbjct: 1365 ctctcttttttgggtttgcaatgcatctaggaggaatgggtttttggatgggcatggtag 1424 Query: 1426 ctggtggagctacacaggtcactctcctatctgtgataactgctactacaaaatgggaca 1485 |||||||||| |||||||||||||| |||||| | || ||||| | ||||| ||| | Sbjct: 1425 ctggtggagcgacacaggtcactcttctatctatcattactgcaatgacaaactggagaa 1484 Query: 1486 agatggccgacaaggctaaggagagagtatttgaagacaggcttccaacaca 1537 ||||||| || ||||||| ||| ||||||||||| || ||| |||| ||||| Sbjct: 1485 agatggctgaaaaggctagggacagagtatttgaggaaaggattccgacaca 1536
>dbj|AK103784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145I01, full insert sequence Length = 1781 Score = 1269 bits (640), Expect = 0.0 Identities = 1189/1372 (86%) Strand = Plus / Plus Query: 166 ggtggtggagggaggcggcggaggagtccggccggctggctgcgctggctgcgccgatga 225 |||||||| |||||||| | | |||| |||| ||||||| ||||||| |||||||||| Sbjct: 165 ggtggtggcgggaggcgactgcggaggccgggaggctggcgtcgctggccgcgccgatga 224 Query: 226 tcgctgtggcgctgctgcagctgatgatgcagctcatctccaccgtcatggtggggcacc 285 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 tcgcggtcgcgctgctgcagctgatgatgcagctcatctccaccgtcatggtggggcacc 284 Query: 286 tcggcgaggtcgcgcttgcgggcgccgccatcgccaactccctcaccaacgtctccggtt 345 |||||||||||||||| || |||||||| ||||||||||||||||||||||||||||| | Sbjct: 285 tcggcgaggtcgcgctcgccggcgccgctatcgccaactccctcaccaacgtctccggct 344 Query: 346 tcagcgtcctcataggactggcatgcggattggaaactatttgtgggcaggcctatggag 405 ||||||||||||| ||||||||||| || ||||||||||||| || ||||| ||||||| Sbjct: 345 tcagcgtcctcatgggactggcatgtgggctggaaactatttgcggacaggcttatggag 404 Query: 406 cagaacagtatcataagttatccttatatacctacaggtccatcattgtacttcttattg 465 ||||||||||||||||| || | ||||||| ||||||||||| ||||| |||||| ||| Sbjct: 405 cagaacagtatcataagctagctttatatatgtacaggtccataattgtgcttcttgttg 464 Query: 466 tgagtgtgcccatcgccattgtatgggttttcattccggaagtacttcctctcataggtc 525 ||||||| || |||||||| ||||||||||||| || || ||||||||||||||||||| Sbjct: 465 tgagtgtaccaatcgccatcatatgggttttcatcccagaggtacttcctctcataggtc 524 Query: 526 agcaaccagaaattgcaaatgaggctgggaaatatgcattatggcttatccctggtttat 585 ||||||||||||| |||| ||| | |||||| |||||||| ||||| ||||||||||||| Sbjct: 525 agcaaccagaaatagcaagtgaagttgggaagtatgcattgtggctaatccctggtttat 584 Query: 586 ttgccttcagtgttgctcaatgcttttcaaagtttctgcagtgtcagagcctcatctttc 645 ||||||||| ||||||||||||||| |||||||| || ||| ||| ||||| || |||| Sbjct: 585 ttgccttcactgttgctcaatgcttatcaaagttcctccagactcaaagcctaatatttc 644 Query: 646 ctatggttcttagctccatgatcacactcgctgtatttattcctctgtgttggttcatgg 705 |||||||||| ||||| || ||||| || | || |||||| ||||||||||||||| Sbjct: 645 ctatggttctaagctcatcaataacactagcactcttcattcctttgtgttggttcatgg 704 Query: 706 tttataaagttggtatgggtaatgctggagctgctttatccgtcagcatctgcgattggg 765 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 705 tttataaagttgggatgggtaatgctggagctgctttatcagtcagtatctgtgattggg 764 Query: 766 ttgaagtgattgtccttggtctttacattaagttctcgccttcttgtgagaaaacacgtg 825 | ||||||| ||| ||||||||||||||| |||| ||||||||||| ||||| |||| Sbjct: 765 tcgaagtgactgttcttggtctttacattgttctctcaccttcttgtgaaaaaactcgtg 824 Query: 826 ctccactcacgtgggaagcttttaaaggaattggcagtttcatgcgtttggctgtaccgt 885 |||||||||| |||||||| |||| || ||||| |||||| || | ||||||||||| | Sbjct: 825 ctccactcacatgggaagcatttagtgggattggaagtttcttgaggttggctgtaccat 884 Query: 886 cggctcttatgatttgccttgagtggtggtcttacgagctgcttgttctgctttctggga 945 |||| || ||||||||||| || ||||||||||| ||||||||||||||||||||||||| Sbjct: 885 cggccctcatgatttgcctcgaatggtggtcttatgagctgcttgttctgctttctggga 944 Query: 946 tcttaccaaatccagcacttgaaacttctgtgctttctatatgcatatctacagtggtac 1005 || ||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 945 tcctaccaaatccagcacttgaaacttctgtgctttctatatgcatttctactgttgtgt 1004 Query: 1006 tgttgtacaatcttccttacggtattggaacagctgcaagtgttcgtgtctcgaatgaac 1065 || |||||||||| ||| | ||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1005 tggtgtacaatctccctcatggtattggaacagctgcaagtgtccgtgtctcaaatgaac 1064 Query: 1066 taggtgctggcaacccagaaggtgcccgcttggtggtaggtgttgctttgtctattgtag 1125 ||||||| || || |||||||||||||||||| | ||||| |||||||| ||| || || Sbjct: 1065 taggtgcagggaatccagaaggtgcccgcttgatagtaggggttgctttatctgttatac 1124 Query: 1126 tttgttcagcagcactggtgagcacaactcttctcgcatcgcgtcacttcattggaattg 1185 |||||||||||| || ||||| ||| ||||| || | |||||| ||||| ||||||| Sbjct: 1125 tttgttcagcagtcctagtgagtgtaacacttctagcgttgcgtcatttcatcggaattg 1184 Query: 1186 cattcagcaatgaggaggaggttatagattatgtcaccagaatggtgcccgtactttcca 1245 | |||||||||||||| || || ||| ||||||| || |||||||| || || ||||||| Sbjct: 1185 ctttcagcaatgaggaagaagtcataaattatgtaacaagaatggtacctgttctttcca 1244 Query: 1246 tttcagttattacagacagcctccaaggagtcctttcaggtgtttctcggggctgtggat 1305 | |||||||||||||||||||| || || ||||| ||||||||||| |||||||||||| Sbjct: 1245 tctcagttattacagacagccttcagggtgtcctctcaggtgtttccaggggctgtggat 1304 Query: 1306 ggcagcatttaggcgcgtacgttaacctgggtgcattctatcttgttgggattccagttg 1365 |||||||| |||| || || |||||||| ||||||||||||||||| || |||| |||| Sbjct: 1305 ggcagcatctaggggcctatgttaacctaggtgcattctatcttgtcggagttcctgttg 1364 Query: 1366 cactcttttttggttttacaatgcaactaagaggaatgggattttggattggcatgatag 1425 | ||||||||||| ||| ||||||| ||| |||||||||| |||||||| |||||| ||| Sbjct: 1365 ctctcttttttgggtttgcaatgcatctaggaggaatgggtttttggatgggcatggtag 1424 Query: 1426 ctggtggagctacacaggtcactctcctatctgtgataactgctactacaaaatgggaca 1485 |||||||||| |||||||||||||| |||||| | || ||||| | ||||| ||| | Sbjct: 1425 ctggtggagcgacacaggtcactcttctatctatcattactgcaatgacaaactggagaa 1484 Query: 1486 agatggccgacaaggctaaggagagagtatttgaagacaggcttccaacaca 1537 ||||||| || ||||||| ||| ||||||||||| || ||| |||| ||||| Sbjct: 1485 agatggctgaaaaggctagggacagagtatttgaggaaaggattccgacaca 1536
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 480 bits (242), Expect = e-132 Identities = 467/542 (86%) Strand = Plus / Minus Query: 360 ggactggcatgcggattggaaactatttgtgggcaggcctatggagcagaacagtatcat 419 ||||||||||| || ||||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 17504755 ggactggcatgtgggctggaaactatttgcggacaggcttatggagcagaacagtatcat 17504696 Query: 420 aagttatccttatatacctacaggtccatcattgtacttcttattgtgagtgtgcccatc 479 ||| || | ||||||| ||||||||||| ||||| |||||| |||||||||| || ||| Sbjct: 17504695 aagctagctttatatatgtacaggtccataattgtgcttcttgttgtgagtgtaccaatc 17504636 Query: 480 gccattgtatgggttttcattccggaagtacttcctctcataggtcagcaaccagaaatt 539 ||||| ||||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct: 17504635 gccatcatatgggttttcatcccagaggtacttcctctcataggtcagcaaccagaaata 17504576 Query: 540 gcaaatgaggctgggaaatatgcattatggcttatccctggtttatttgccttcagtgtt 599 |||| ||| | |||||| |||||||| ||||| |||||||||||||||||||||| |||| Sbjct: 17504575 gcaagtgaagttgggaagtatgcattgtggctaatccctggtttatttgccttcactgtt 17504516 Query: 600 gctcaatgcttttcaaagtttctgcagtgtcagagcctcatctttcctatggttcttagc 659 ||||||||||| |||||||| || ||| ||| ||||| || |||||||||||||| ||| Sbjct: 17504515 gctcaatgcttatcaaagttcctccagactcaaagcctaatatttcctatggttctaagc 17504456 Query: 660 tccatgatcacactcgctgtatttattcctctgtgttggttcatggtttataaagttggt 719 || || ||||| || | || |||||| |||||||||||||||||||||||||||| Sbjct: 17504455 tcatcaataacactagcactcttcattcctttgtgttggttcatggtttataaagttggg 17504396 Query: 720 atgggtaatgctggagctgctttatccgtcagcatctgcgattgggttgaagtgattgtc 779 |||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||| ||| Sbjct: 17504395 atgggtaatgctggagctgctttatcagtcagtatctgtgattgggtcgaagtgactgtt 17504336 Query: 780 cttggtctttacattaagttctcgccttcttgtgagaaaacacgtgctccactcacgtgg 839 ||||||||||||||| |||| ||||||||||| ||||| |||||||||||||| ||| Sbjct: 17504335 cttggtctttacattgttctctcaccttcttgtgaaaaaactcgtgctccactcacatgg 17504276 Query: 840 gaagcttttaaaggaattggcagtttcatgcgtttggctgtaccgtcggctcttatgatt 899 ||||| |||| || ||||| |||||| || | ||||||||||| ||||| || |||||| Sbjct: 17504275 gaagcatttagtgggattggaagtttcttgaggttggctgtaccatcggccctcatgatt 17504216 Query: 900 tg 901 || Sbjct: 17504215 tg 17504214 Score = 252 bits (127), Expect = 4e-63 Identities = 175/191 (91%) Strand = Plus / Minus Query: 166 ggtggtggagggaggcggcggaggagtccggccggctggctgcgctggctgcgccgatga 225 |||||||| |||||||| | | |||| |||| ||||||| ||||||| |||||||||| Sbjct: 17508250 ggtggtggcgggaggcgactgcggaggccgggaggctggcgtcgctggccgcgccgatga 17508191 Query: 226 tcgctgtggcgctgctgcagctgatgatgcagctcatctccaccgtcatggtggggcacc 285 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17508190 tcgcggtcgcgctgctgcagctgatgatgcagctcatctccaccgtcatggtggggcacc 17508131 Query: 286 tcggcgaggtcgcgcttgcgggcgccgccatcgccaactccctcaccaacgtctccggtt 345 |||||||||||||||| || |||||||| ||||||||||||||||||||||||||||| | Sbjct: 17508130 tcggcgaggtcgcgctcgccggcgccgctatcgccaactccctcaccaacgtctccggct 17508071 Query: 346 tcagcgtcctc 356 ||||||||||| Sbjct: 17508070 tcagcgtcctc 17508060 Score = 182 bits (92), Expect = 3e-42 Identities = 155/176 (88%) Strand = Plus / Minus Query: 1282 caggtgtttctcggggctgtggatggcagcatttaggcgcgtacgttaacctgggtgcat 1341 |||||||||| |||||||||||||||||||| |||| || || |||||||| ||||||| Sbjct: 17501768 caggtgtttccaggggctgtggatggcagcatctaggggcctatgttaacctaggtgcat 17501709 Query: 1342 tctatcttgttgggattccagttgcactcttttttggttttacaatgcaactaagaggaa 1401 |||||||||| || |||| ||||| ||||||||||| ||| ||||||| ||| |||||| Sbjct: 17501708 tctatcttgtcggagttcctgttgctctcttttttgggtttgcaatgcatctaggaggaa 17501649 Query: 1402 tgggattttggattggcatgatagctggtggagctacacaggtcactctcctatct 1457 |||| |||||||| |||||| ||||||||||||| |||||||||||||| |||||| Sbjct: 17501648 tgggtttttggatgggcatggtagctggtggagcgacacaggtcactcttctatct 17501593 Score = 180 bits (91), Expect = 1e-41 Identities = 205/243 (84%) Strand = Plus / Minus Query: 1044 agtgttcgtgtctcgaatgaactaggtgctggcaacccagaaggtgcccgcttggtggta 1103 ||||| |||||||| |||||||||||||| || || |||||||||||||||||||| ||| Sbjct: 17502295 agtgtccgtgtctcaaatgaactaggtgcagggaatccagaaggtgcccgcttggtagta 17502236 Query: 1104 ggtgttgctttgtctattgtagtttgttcagcagcactggtgagcacaactcttctcgca 1163 || |||||||| ||| || || |||||||||||| || ||||| ||| ||||| || Sbjct: 17502235 ggggttgctttatctgttatactttgttcagcagtcctagtgagtgtaacacttctagcg 17502176 Query: 1164 tcgcgtcacttcattggaattgcattcagcaatgaggaggaggttatagattatgtcacc 1223 | |||||| ||||| |||||||| |||||||||||||| || || ||| ||||||| || Sbjct: 17502175 ttgcgtcatttcatcggaattgctttcagcaatgaggaagaagtcataaattatgtaaca 17502116 Query: 1224 agaatggtgcccgtactttccatttcagttattacagacagcctccaaggagtcctttca 1283 |||||||| || || |||||||| |||||||||||||||||||| || || ||||| ||| Sbjct: 17502115 agaatggtacctgttctttccatctcagttattacagacagccttcagggtgtcctctca 17502056 Query: 1284 ggt 1286 ||| Sbjct: 17502055 ggt 17502053 Score = 143 bits (72), Expect = 3e-30 Identities = 78/80 (97%) Strand = Plus / Minus Query: 909 tggtggtcttacgagctgcttgttctgctttctgggatcttaccaaatccagcacttgaa 968 ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 17502601 tggtggtcttatgagctgcttgttctgctttctgggatcctaccaaatccagcacttgaa 17502542 Query: 969 acttctgtgctttctatatg 988 |||||||||||||||||||| Sbjct: 17502541 acttctgtgctttctatatg 17502522 Score = 52.0 bits (26), Expect = 0.007 Identities = 56/66 (84%) Strand = Plus / Minus Query: 1281 tcaggtgtttctcggggctgtggatggcagcatttaggcgcgtacgttaacctgggtgca 1340 |||||| || |||| || ||||||||||| ||||| ||||||||||| ||||| || || Sbjct: 28229075 tcaggtattgctcgaggttgtggatggcaacatttgggcgcgtacgtcaacctcggctca 28229016 Query: 1341 ttctat 1346 |||||| Sbjct: 28229015 ttctat 28229010 Score = 50.1 bits (25), Expect = 0.028 Identities = 34/37 (91%) Strand = Plus / Minus Query: 1009 tgtacaatcttccttacggtattggaacagctgcaag 1045 |||||||||| ||| | |||||||||||||||||||| Sbjct: 17502422 tgtacaatctccctcatggtattggaacagctgcaag 17502386 Score = 42.1 bits (21), Expect = 6.8 Identities = 42/49 (85%) Strand = Plus / Minus Query: 308 cgccgccatcgccaactccctcaccaacgtctccggtttcagcgtcctc 356 |||||||||||||| ||||||| || |||| |||| |||||| ||||| Sbjct: 28231493 cgccgccatcgccacctccctcgcctccgtcaccggcttcagcctcctc 28231445
>dbj|AP003054.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436D06 Length = 148246 Score = 480 bits (242), Expect = e-132 Identities = 467/542 (86%) Strand = Plus / Minus Query: 360 ggactggcatgcggattggaaactatttgtgggcaggcctatggagcagaacagtatcat 419 ||||||||||| || ||||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 22327 ggactggcatgtgggctggaaactatttgcggacaggcttatggagcagaacagtatcat 22268 Query: 420 aagttatccttatatacctacaggtccatcattgtacttcttattgtgagtgtgcccatc 479 ||| || | ||||||| ||||||||||| ||||| |||||| |||||||||| || ||| Sbjct: 22267 aagctagctttatatatgtacaggtccataattgtgcttcttgttgtgagtgtaccaatc 22208 Query: 480 gccattgtatgggttttcattccggaagtacttcctctcataggtcagcaaccagaaatt 539 ||||| ||||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct: 22207 gccatcatatgggttttcatcccagaggtacttcctctcataggtcagcaaccagaaata 22148 Query: 540 gcaaatgaggctgggaaatatgcattatggcttatccctggtttatttgccttcagtgtt 599 |||| ||| | |||||| |||||||| ||||| |||||||||||||||||||||| |||| Sbjct: 22147 gcaagtgaagttgggaagtatgcattgtggctaatccctggtttatttgccttcactgtt 22088 Query: 600 gctcaatgcttttcaaagtttctgcagtgtcagagcctcatctttcctatggttcttagc 659 ||||||||||| |||||||| || ||| ||| ||||| || |||||||||||||| ||| Sbjct: 22087 gctcaatgcttatcaaagttcctccagactcaaagcctaatatttcctatggttctaagc 22028 Query: 660 tccatgatcacactcgctgtatttattcctctgtgttggttcatggtttataaagttggt 719 || || ||||| || | || |||||| |||||||||||||||||||||||||||| Sbjct: 22027 tcatcaataacactagcactcttcattcctttgtgttggttcatggtttataaagttggg 21968 Query: 720 atgggtaatgctggagctgctttatccgtcagcatctgcgattgggttgaagtgattgtc 779 |||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||| ||| Sbjct: 21967 atgggtaatgctggagctgctttatcagtcagtatctgtgattgggtcgaagtgactgtt 21908 Query: 780 cttggtctttacattaagttctcgccttcttgtgagaaaacacgtgctccactcacgtgg 839 ||||||||||||||| |||| ||||||||||| ||||| |||||||||||||| ||| Sbjct: 21907 cttggtctttacattgttctctcaccttcttgtgaaaaaactcgtgctccactcacatgg 21848 Query: 840 gaagcttttaaaggaattggcagtttcatgcgtttggctgtaccgtcggctcttatgatt 899 ||||| |||| || ||||| |||||| || | ||||||||||| ||||| || |||||| Sbjct: 21847 gaagcatttagtgggattggaagtttcttgaggttggctgtaccatcggccctcatgatt 21788 Query: 900 tg 901 || Sbjct: 21787 tg 21786 Score = 252 bits (127), Expect = 4e-63 Identities = 175/191 (91%) Strand = Plus / Minus Query: 166 ggtggtggagggaggcggcggaggagtccggccggctggctgcgctggctgcgccgatga 225 |||||||| |||||||| | | |||| |||| ||||||| ||||||| |||||||||| Sbjct: 25822 ggtggtggcgggaggcgactgcggaggccgggaggctggcgtcgctggccgcgccgatga 25763 Query: 226 tcgctgtggcgctgctgcagctgatgatgcagctcatctccaccgtcatggtggggcacc 285 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25762 tcgcggtcgcgctgctgcagctgatgatgcagctcatctccaccgtcatggtggggcacc 25703 Query: 286 tcggcgaggtcgcgcttgcgggcgccgccatcgccaactccctcaccaacgtctccggtt 345 |||||||||||||||| || |||||||| ||||||||||||||||||||||||||||| | Sbjct: 25702 tcggcgaggtcgcgctcgccggcgccgctatcgccaactccctcaccaacgtctccggct 25643 Query: 346 tcagcgtcctc 356 ||||||||||| Sbjct: 25642 tcagcgtcctc 25632 Score = 182 bits (92), Expect = 3e-42 Identities = 155/176 (88%) Strand = Plus / Minus Query: 1282 caggtgtttctcggggctgtggatggcagcatttaggcgcgtacgttaacctgggtgcat 1341 |||||||||| |||||||||||||||||||| |||| || || |||||||| ||||||| Sbjct: 19340 caggtgtttccaggggctgtggatggcagcatctaggggcctatgttaacctaggtgcat 19281 Query: 1342 tctatcttgttgggattccagttgcactcttttttggttttacaatgcaactaagaggaa 1401 |||||||||| || |||| ||||| ||||||||||| ||| ||||||| ||| |||||| Sbjct: 19280 tctatcttgtcggagttcctgttgctctcttttttgggtttgcaatgcatctaggaggaa 19221 Query: 1402 tgggattttggattggcatgatagctggtggagctacacaggtcactctcctatct 1457 |||| |||||||| |||||| ||||||||||||| |||||||||||||| |||||| Sbjct: 19220 tgggtttttggatgggcatggtagctggtggagcgacacaggtcactcttctatct 19165 Score = 180 bits (91), Expect = 1e-41 Identities = 205/243 (84%) Strand = Plus / Minus Query: 1044 agtgttcgtgtctcgaatgaactaggtgctggcaacccagaaggtgcccgcttggtggta 1103 ||||| |||||||| |||||||||||||| || || |||||||||||||||||||| ||| Sbjct: 19867 agtgtccgtgtctcaaatgaactaggtgcagggaatccagaaggtgcccgcttggtagta 19808 Query: 1104 ggtgttgctttgtctattgtagtttgttcagcagcactggtgagcacaactcttctcgca 1163 || |||||||| ||| || || |||||||||||| || ||||| ||| ||||| || Sbjct: 19807 ggggttgctttatctgttatactttgttcagcagtcctagtgagtgtaacacttctagcg 19748 Query: 1164 tcgcgtcacttcattggaattgcattcagcaatgaggaggaggttatagattatgtcacc 1223 | |||||| ||||| |||||||| |||||||||||||| || || ||| ||||||| || Sbjct: 19747 ttgcgtcatttcatcggaattgctttcagcaatgaggaagaagtcataaattatgtaaca 19688 Query: 1224 agaatggtgcccgtactttccatttcagttattacagacagcctccaaggagtcctttca 1283 |||||||| || || |||||||| |||||||||||||||||||| || || ||||| ||| Sbjct: 19687 agaatggtacctgttctttccatctcagttattacagacagccttcagggtgtcctctca 19628 Query: 1284 ggt 1286 ||| Sbjct: 19627 ggt 19625 Score = 143 bits (72), Expect = 3e-30 Identities = 78/80 (97%) Strand = Plus / Minus Query: 909 tggtggtcttacgagctgcttgttctgctttctgggatcttaccaaatccagcacttgaa 968 ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 20173 tggtggtcttatgagctgcttgttctgctttctgggatcctaccaaatccagcacttgaa 20114 Query: 969 acttctgtgctttctatatg 988 |||||||||||||||||||| Sbjct: 20113 acttctgtgctttctatatg 20094 Score = 50.1 bits (25), Expect = 0.028 Identities = 34/37 (91%) Strand = Plus / Minus Query: 1009 tgtacaatcttccttacggtattggaacagctgcaag 1045 |||||||||| ||| | |||||||||||||||||||| Sbjct: 19994 tgtacaatctccctcatggtattggaacagctgcaag 19958
>dbj|AK122047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114C22, full insert sequence Length = 4056 Score = 297 bits (150), Expect = 7e-77 Identities = 264/302 (87%) Strand = Plus / Plus Query: 360 ggactggcatgcggattggaaactatttgtgggcaggcctatggagcagaacagtatcat 419 ||||||||||| || ||||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 3718 ggactggcatgtgggctggaaactatttgcggacaggcttatggagcagaacagtatcat 3777 Query: 420 aagttatccttatatacctacaggtccatcattgtacttcttattgtgagtgtgcccatc 479 ||| || | ||||||| ||||||||||| ||||| |||||| |||||||||| || ||| Sbjct: 3778 aagctagctttatatatgtacaggtccataattgtgcttcttgttgtgagtgtaccaatc 3837 Query: 480 gccattgtatgggttttcattccggaagtacttcctctcataggtcagcaaccagaaatt 539 ||||| ||||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct: 3838 gccatcatatgggttttcatcccagaggtacttcctctcataggtcagcaaccagaaata 3897 Query: 540 gcaaatgaggctgggaaatatgcattatggcttatccctggtttatttgccttcagtgtt 599 |||| ||| | |||||| |||||||| ||||| |||||||||||||||||||||| |||| Sbjct: 3898 gcaagtgaagttgggaagtatgcattgtggctaatccctggtttatttgccttcactgtt 3957 Query: 600 gctcaatgcttttcaaagtttctgcagtgtcagagcctcatctttcctatggttcttagc 659 ||||||||||| |||||||| || ||| ||| ||||| || |||||||||||||| ||| Sbjct: 3958 gctcaatgcttatcaaagttcctccagactcaaagcctaatatttcctatggttctaagc 4017 Query: 660 tc 661 || Sbjct: 4018 tc 4019 Score = 252 bits (127), Expect = 4e-63 Identities = 175/191 (91%) Strand = Plus / Plus Query: 166 ggtggtggagggaggcggcggaggagtccggccggctggctgcgctggctgcgccgatga 225 |||||||| |||||||| | | |||| |||| ||||||| ||||||| |||||||||| Sbjct: 223 ggtggtggcgggaggcgactgcggaggccgggaggctggcgtcgctggccgcgccgatga 282 Query: 226 tcgctgtggcgctgctgcagctgatgatgcagctcatctccaccgtcatggtggggcacc 285 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 tcgcggtcgcgctgctgcagctgatgatgcagctcatctccaccgtcatggtggggcacc 342 Query: 286 tcggcgaggtcgcgcttgcgggcgccgccatcgccaactccctcaccaacgtctccggtt 345 |||||||||||||||| || |||||||| ||||||||||||||||||||||||||||| | Sbjct: 343 tcggcgaggtcgcgctcgccggcgccgctatcgccaactccctcaccaacgtctccggct 402 Query: 346 tcagcgtcctc 356 ||||||||||| Sbjct: 403 tcagcgtcctc 413
>ref|NM_001062801.1| Oryza sativa (japonica cultivar-group) Os05g0554000 (Os05g0554000) mRNA, complete cds Length = 2426 Score = 63.9 bits (32), Expect = 2e-06 Identities = 95/116 (81%) Strand = Plus / Plus Query: 310 ccgccatcgccaactccctcaccaacgtctccggtttcagcgtcctcataggactggcat 369 |||||||||||| ||||||| ||| ||||||||| |||||| ||||| | ||| ||||| Sbjct: 341 ccgccatcgccacctccctcgccagcgtctccggcttcagcctcctcgttggaatggcaa 400 Query: 370 gcggattggaaactatttgtgggcaggcctatggagcagaacagtatcataagtta 425 | ||||| |||||| | || || || || ||||| ||| |||||||| | |||||| Sbjct: 401 gtggattagaaactctctgcggtcaagcttatggggcaaaacagtatgacaagtta 456
>dbj|AK105402.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-D07, full insert sequence Length = 2889 Score = 63.9 bits (32), Expect = 2e-06 Identities = 95/116 (81%) Strand = Plus / Plus Query: 310 ccgccatcgccaactccctcaccaacgtctccggtttcagcgtcctcataggactggcat 369 |||||||||||| ||||||| ||| ||||||||| |||||| ||||| | ||| ||||| Sbjct: 341 ccgccatcgccacctccctcgccagcgtctccggcttcagcctcctcgttggaatggcaa 400 Query: 370 gcggattggaaactatttgtgggcaggcctatggagcagaacagtatcataagtta 425 | ||||| |||||| | || || || || ||||| ||| |||||||| | |||||| Sbjct: 401 gtggattagaaactctctgcggtcaagcttatggggcaaaacagtatgacaagtta 456
>dbj|AK073902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071I17, full insert sequence Length = 2429 Score = 63.9 bits (32), Expect = 2e-06 Identities = 95/116 (81%) Strand = Plus / Plus Query: 310 ccgccatcgccaactccctcaccaacgtctccggtttcagcgtcctcataggactggcat 369 |||||||||||| ||||||| ||| ||||||||| |||||| ||||| | ||| ||||| Sbjct: 344 ccgccatcgccacctccctcgccagcgtctccggcttcagcctcctcgttggaatggcaa 403 Query: 370 gcggattggaaactatttgtgggcaggcctatggagcagaacagtatcataagtta 425 | ||||| |||||| | || || || || ||||| ||| |||||||| | |||||| Sbjct: 404 gtggattagaaactctctgcggtcaagcttatggggcaaaacagtatgacaagtta 459
>ref|NM_126449.3| Arabidopsis thaliana antiporter/ drug transporter/ transporter (AT2G04080) mRNA, complete cds Length = 1626 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 374 attggaaactatttgtgggcaggcctatggagcagaaca 412 |||||||||| ||||||| || ||||||||||||||||| Sbjct: 324 attggaaactctttgtggccaagcctatggagcagaaca 362
>gb|AC093956.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1263_E10, complete sequence Length = 116469 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 310 ccgccatcgccaactccctcaccaacgtctccggtttcagcgtcctc 356 |||||||||||| ||||||| ||| ||||||||| |||||| ||||| Sbjct: 34601 ccgccatcgccacctccctcgccagcgtctccggcttcagcctcctc 34647
>gb|AC007178.6| Arabidopsis thaliana chromosome 2 clone F3L12 map mi320, complete sequence Length = 116149 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 374 attggaaactatttgtgggcaggcctatggagcagaaca 412 |||||||||| ||||||| || ||||||||||||||||| Sbjct: 45432 attggaaactctttgtggccaagcctatggagcagaaca 45470
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 310 ccgccatcgccaactccctcaccaacgtctccggtttcagcgtcctc 356 |||||||||||| ||||||| ||| ||||||||| |||||| ||||| Sbjct: 27322144 ccgccatcgccacctccctcgccagcgtctccggcttcagcctcctc 27322190
>gb|BT005511.1| Arabidopsis thaliana clone U50644 unknown protein (At2g04080) mRNA, complete cds Length = 1462 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 374 attggaaactatttgtgggcaggcctatggagcagaaca 412 |||||||||| ||||||| || ||||||||||||||||| Sbjct: 264 attggaaactctttgtggccaagcctatggagcagaaca 302
>dbj|AK118147.1| Arabidopsis thaliana At2g04080 mRNA for unknown protein, complete cds, clone: RAFL19-45-A01 Length = 1599 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 374 attggaaactatttgtgggcaggcctatggagcagaaca 412 |||||||||| ||||||| || ||||||||||||||||| Sbjct: 273 attggaaactctttgtggccaagcctatggagcagaaca 311
>emb|BX819408.1|CNS0A9RE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB75ZE11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1489 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 374 attggaaactatttgtgggcaggcctatggagcagaaca 412 |||||||||| ||||||| || ||||||||||||||||| Sbjct: 269 attggaaactctttgtggccaagcctatggagcagaaca 307
>emb|BX819355.1|CNS0A82E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB71ZA09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1494 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 374 attggaaactatttgtgggcaggcctatggagcagaaca 412 |||||||||| ||||||| || ||||||||||||||||| Sbjct: 269 attggaaactctttgtggccaagcctatggagcagaaca 307
>ref|NM_001050428.1| Oryza sativa (japonica cultivar-group) Os01g0684900 (Os01g0684900) mRNA, complete cds Length = 1995 Score = 52.0 bits (26), Expect = 0.007 Identities = 56/66 (84%) Strand = Plus / Plus Query: 1281 tcaggtgtttctcggggctgtggatggcagcatttaggcgcgtacgttaacctgggtgca 1340 |||||| || |||| || ||||||||||| ||||| ||||||||||| ||||| || || Sbjct: 1370 tcaggtattgctcgaggttgtggatggcaacatttgggcgcgtacgtcaacctcggctca 1429 Query: 1341 ttctat 1346 |||||| Sbjct: 1430 ttctat 1435 Score = 50.1 bits (25), Expect = 0.028 Identities = 52/61 (85%) Strand = Plus / Plus Query: 308 cgccgccatcgccaactccctcaccaacgtctccggtttcagcgtcctcataggactggc 367 |||||||||||||| ||||||| || |||| |||| |||||| ||||||| ||| |||| Sbjct: 397 cgccgccatcgccacctccctcgcctccgtcaccggcttcagcctcctcattggaatggc 456 Query: 368 a 368 | Sbjct: 457 a 457 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 891 cttatgatttgccttgagtggtggtc 916 ||||||||||| |||||||||||||| Sbjct: 980 cttatgatttgtcttgagtggtggtc 1005
>dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0478H03 Length = 167560 Score = 52.0 bits (26), Expect = 0.007 Identities = 56/66 (84%) Strand = Plus / Minus Query: 1281 tcaggtgtttctcggggctgtggatggcagcatttaggcgcgtacgttaacctgggtgca 1340 |||||| || |||| || ||||||||||| ||||| ||||||||||| ||||| || || Sbjct: 63582 tcaggtattgctcgaggttgtggatggcaacatttgggcgcgtacgtcaacctcggctca 63523 Query: 1341 ttctat 1346 |||||| Sbjct: 63522 ttctat 63517 Score = 42.1 bits (21), Expect = 6.8 Identities = 42/49 (85%) Strand = Plus / Minus Query: 308 cgccgccatcgccaactccctcaccaacgtctccggtttcagcgtcctc 356 |||||||||||||| ||||||| || |||| |||| |||||| ||||| Sbjct: 66000 cgccgccatcgccacctccctcgcctccgtcaccggcttcagcctcctc 65952
>dbj|AP003347.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445E10 Length = 145912 Score = 52.0 bits (26), Expect = 0.007 Identities = 56/66 (84%) Strand = Plus / Minus Query: 1281 tcaggtgtttctcggggctgtggatggcagcatttaggcgcgtacgttaacctgggtgca 1340 |||||| || |||| || ||||||||||| ||||| ||||||||||| ||||| || || Sbjct: 113069 tcaggtattgctcgaggttgtggatggcaacatttgggcgcgtacgtcaacctcggctca 113010 Query: 1341 ttctat 1346 |||||| Sbjct: 113009 ttctat 113004 Score = 42.1 bits (21), Expect = 6.8 Identities = 42/49 (85%) Strand = Plus / Minus Query: 308 cgccgccatcgccaactccctcaccaacgtctccggtttcagcgtcctc 356 |||||||||||||| ||||||| || |||| |||| |||||| ||||| Sbjct: 115487 cgccgccatcgccacctccctcgcctccgtcaccggcttcagcctcctc 115439
>dbj|AK102052.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082B20, full insert sequence Length = 1997 Score = 52.0 bits (26), Expect = 0.007 Identities = 56/66 (84%) Strand = Plus / Plus Query: 1281 tcaggtgtttctcggggctgtggatggcagcatttaggcgcgtacgttaacctgggtgca 1340 |||||| || |||| || ||||||||||| ||||| ||||||||||| ||||| || || Sbjct: 1371 tcaggtattgctcgaggttgtggatggcaacatttgggcgcgtacgtcaacctcggctca 1430 Query: 1341 ttctat 1346 |||||| Sbjct: 1431 ttctat 1436 Score = 50.1 bits (25), Expect = 0.028 Identities = 52/61 (85%) Strand = Plus / Plus Query: 308 cgccgccatcgccaactccctcaccaacgtctccggtttcagcgtcctcataggactggc 367 |||||||||||||| ||||||| || |||| |||| |||||| ||||||| ||| |||| Sbjct: 398 cgccgccatcgccacctccctcgcctccgtcaccggcttcagcctcctcattggaatggc 457 Query: 368 a 368 | Sbjct: 458 a 458 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 891 cttatgatttgccttgagtggtggtc 916 ||||||||||| |||||||||||||| Sbjct: 981 cttatgatttgtcttgagtggtggtc 1006
>ref|NM_001070928.1| Oryza sativa (japonica cultivar-group) Os10g0344900 (Os10g0344900) mRNA, complete cds Length = 1758 Score = 50.1 bits (25), Expect = 0.028 Identities = 58/69 (84%) Strand = Plus / Plus Query: 282 cacctcggcgaggtcgcgcttgcgggcgccgccatcgccaactccctcaccaacgtctcc 341 |||||||||||| || | || || |||||| || |||||| ||||||| |||||||| || Sbjct: 247 cacctcggcgagctccccctcgccggcgcctccctcgccacctccctcgccaacgtcacc 306 Query: 342 ggtttcagc 350 || |||||| Sbjct: 307 ggcttcagc 315
>gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0052C09, complete sequence Length = 139468 Score = 50.1 bits (25), Expect = 0.028 Identities = 58/69 (84%) Strand = Plus / Plus Query: 282 cacctcggcgaggtcgcgcttgcgggcgccgccatcgccaactccctcaccaacgtctcc 341 |||||||||||| || | || || |||||| || |||||| ||||||| |||||||| || Sbjct: 130690 cacctcggcgagctccccctcgccggcgcctccctcgccacctccctcgccaacgtcacc 130749 Query: 342 ggtttcagc 350 || |||||| Sbjct: 130750 ggcttcagc 130758
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 50.1 bits (25), Expect = 0.028 Identities = 58/69 (84%) Strand = Plus / Plus Query: 282 cacctcggcgaggtcgcgcttgcgggcgccgccatcgccaactccctcaccaacgtctcc 341 |||||||||||| || | || || |||||| || |||||| ||||||| |||||||| || Sbjct: 9778165 cacctcggcgagctccccctcgccggcgcctccctcgccacctccctcgccaacgtcacc 9778224 Query: 342 ggtttcagc 350 || |||||| Sbjct: 9778225 ggcttcagc 9778233
>gb|AC079634.3|AC079634 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045C13, from Chromosome 10, complete sequence Length = 161250 Score = 50.1 bits (25), Expect = 0.028 Identities = 58/69 (84%) Strand = Plus / Plus Query: 282 cacctcggcgaggtcgcgcttgcgggcgccgccatcgccaactccctcaccaacgtctcc 341 |||||||||||| || | || || |||||| || |||||| ||||||| |||||||| || Sbjct: 10644 cacctcggcgagctccccctcgccggcgcctccctcgccacctccctcgccaacgtcacc 10703 Query: 342 ggtttcagc 350 || |||||| Sbjct: 10704 ggcttcagc 10712
>dbj|AK103119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119H22, full insert sequence Length = 1743 Score = 50.1 bits (25), Expect = 0.028 Identities = 58/69 (84%) Strand = Plus / Plus Query: 282 cacctcggcgaggtcgcgcttgcgggcgccgccatcgccaactccctcaccaacgtctcc 341 |||||||||||| || | || || |||||| || |||||| ||||||| |||||||| || Sbjct: 237 cacctcggcgagctccccctcgccggcgcctccctcgccacctccctcgccaacgtcacc 296 Query: 342 ggtttcagc 350 || |||||| Sbjct: 297 ggcttcagc 305
>dbj|AK073245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033012J16, full insert sequence Length = 1759 Score = 50.1 bits (25), Expect = 0.028 Identities = 58/69 (84%) Strand = Plus / Plus Query: 282 cacctcggcgaggtcgcgcttgcgggcgccgccatcgccaactccctcaccaacgtctcc 341 |||||||||||| || | || || |||||| || |||||| ||||||| |||||||| || Sbjct: 248 cacctcggcgagctccccctcgccggcgcctccctcgccacctccctcgccaacgtcacc 307 Query: 342 ggtttcagc 350 || |||||| Sbjct: 308 ggcttcagc 316
>ref|NM_105783.1| Arabidopsis thaliana antiporter/ drug transporter/ transporter (AT1G71140) mRNA, complete cds Length = 1458 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Plus Query: 893 tatgatttgccttgagtggtggtc 916 |||||||||||||||||||||||| Sbjct: 780 tatgatttgccttgagtggtggtc 803
>ref|NM_101385.2| Arabidopsis thaliana antiporter/ drug transporter/ transporter (AT1G15170) mRNA, complete cds Length = 1712 Score = 46.1 bits (23), Expect = 0.44 Identities = 26/27 (96%) Strand = Plus / Plus Query: 893 tatgatttgccttgagtggtggtctta 919 |||||||||||| |||||||||||||| Sbjct: 853 tatgatttgcctagagtggtggtctta 879
>gb|BC068671.1| Xenopus laevis hypothetical protein MGC81063, mRNA (cDNA clone MGC:81063 IMAGE:6316467), complete cds Length = 2716 Score = 46.1 bits (23), Expect = 0.44 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1715 tttactgttattttctttttctt 1737 ||||||||||||||||||||||| Sbjct: 2400 tttactgttattttctttttctt 2422
>gb|AY139985.2| Arabidopsis thaliana unknown protein (At1g15170) mRNA, complete cds Length = 1652 Score = 46.1 bits (23), Expect = 0.44 Identities = 26/27 (96%) Strand = Plus / Plus Query: 893 tatgatttgccttgagtggtggtctta 919 |||||||||||| |||||||||||||| Sbjct: 853 tatgatttgcctagagtggtggtctta 879
>dbj|AK030682.1| Mus musculus 6 days neonate head cDNA, RIKEN full-length enriched library, clone:5430428O07 product:hypothetical Glycine-rich region containing protein, full insert sequence Length = 3792 Score = 46.1 bits (23), Expect = 0.44 Identities = 23/23 (100%) Strand = Plus / Plus Query: 157 agcggcagcggtggtggagggag 179 ||||||||||||||||||||||| Sbjct: 1126 agcggcagcggtggtggagggag 1148
>dbj|AK044134.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830093L24 product:hypothetical protein, full insert sequence Length = 778 Score = 46.1 bits (23), Expect = 0.44 Identities = 23/23 (100%) Strand = Plus / Plus Query: 157 agcggcagcggtggtggagggag 179 ||||||||||||||||||||||| Sbjct: 108 agcggcagcggtggtggagggag 130
>gb|BT006616.1| Arabidopsis thaliana At1g15170 mRNA, complete cds Length = 1446 Score = 46.1 bits (23), Expect = 0.44 Identities = 26/27 (96%) Strand = Plus / Plus Query: 893 tatgatttgccttgagtggtggtctta 919 |||||||||||| |||||||||||||| Sbjct: 804 tatgatttgcctagagtggtggtctta 830
>gb|AC092095.39| Mus musculus strain C57BL/6J chromosome 10 clone rp23-34f16, complete sequence Length = 210694 Score = 46.1 bits (23), Expect = 0.44 Identities = 23/23 (100%) Strand = Plus / Plus Query: 157 agcggcagcggtggtggagggag 179 ||||||||||||||||||||||| Sbjct: 165817 agcggcagcggtggtggagggag 165839
>emb|BX817002.1|CNS0ABUY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH80ZB02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1615 Score = 46.1 bits (23), Expect = 0.44 Identities = 26/27 (96%) Strand = Plus / Plus Query: 893 tatgatttgccttgagtggtggtctta 919 |||||||||||| |||||||||||||| Sbjct: 849 tatgatttgcctagagtggtggtctta 875
>emb|BX816976.1|CNS0ABUB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZD12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1626 Score = 46.1 bits (23), Expect = 0.44 Identities = 26/27 (96%) Strand = Plus / Plus Query: 893 tatgatttgccttgagtggtggtctta 919 |||||||||||| |||||||||||||| Sbjct: 849 tatgatttgcctagagtggtggtctta 875
>emb|BX815532.1|CNS0ABBP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZG04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1662 Score = 46.1 bits (23), Expect = 0.44 Identities = 26/27 (96%) Strand = Plus / Plus Query: 893 tatgatttgccttgagtggtggtctta 919 |||||||||||| |||||||||||||| Sbjct: 816 tatgatttgcctagagtggtggtctta 842
>ref|NM_026138.1| Mus musculus RIKEN cDNA 6330407J23 gene (6330407J23Rik), mRNA gb|BC066079.1| Mus musculus RIKEN cDNA 6330407J23 gene, mRNA (cDNA clone MGC:91342 IMAGE:30355520), complete cds Length = 4152 Score = 46.1 bits (23), Expect = 0.44 Identities = 23/23 (100%) Strand = Plus / Plus Query: 157 agcggcagcggtggtggagggag 179 ||||||||||||||||||||||| Sbjct: 1410 agcggcagcggtggtggagggag 1432
>ref|XM_001180301.1| PREDICTED: Strongylocentrotus purpuratus similar to Lysyl-tRNA synthetase (LOC588700), partial mRNA Length = 1756 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1418 catgatagctggtggagctaca 1439 |||||||||||||||||||||| Sbjct: 778 catgatagctggtggagctaca 799
>ref|XM_788370.2| PREDICTED: Strongylocentrotus purpuratus similar to Lysyl-tRNA synthetase (LOC588700), partial mRNA Length = 1756 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1418 catgatagctggtggagctaca 1439 |||||||||||||||||||||| Sbjct: 778 catgatagctggtggagctaca 799
>ref|NM_001064223.1| Oryza sativa (japonica cultivar-group) Os06g0494700 (Os06g0494700) mRNA, complete cds Length = 333 Score = 44.1 bits (22), Expect = 1.7 Identities = 61/74 (82%) Strand = Plus / Plus Query: 282 cacctcggcgaggtcgcgcttgcgggcgccgccatcgccaactccctcaccaacgtctcc 341 |||||||||||| || | || || ||||| |||| ||||||||| |||||| |||| || Sbjct: 253 cacctcggcgagctccccctcgccggcgcttccatggccaactccttcaccaccgtcacc 312 Query: 342 ggtttcagcgtcct 355 || |||||| |||| Sbjct: 313 ggcttcagcctcct 326
>ref|XM_518732.2| PREDICTED: Pan troglodytes similar to OTTHUMP00000017175 (LOC462989), mRNA Length = 4295 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 158 gcggcagcggtggtggagggag 179 |||||||||||||||||||||| Sbjct: 1878 gcggcagcggtggtggagggag 1899
>ref|XM_001059656.1| PREDICTED: Rattus norvegicus similar to intracellular protein transport like (XM453) (predicted) (RGD1307525_predicted), mRNA Length = 7041 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 158 gcggcagcggtggtggagggag 179 |||||||||||||||||||||| Sbjct: 1045 gcggcagcggtggtggagggag 1066
>ref|XM_217724.4| PREDICTED: Rattus norvegicus similar to intracellular protein transport like (XM453) (predicted) (RGD1307525_predicted), mRNA Length = 7155 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 158 gcggcagcggtggtggagggag 179 |||||||||||||||||||||| Sbjct: 1045 gcggcagcggtggtggagggag 1066
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 cctcggcgaggtcgcgcttgcg 305 |||||||||||||||||||||| Sbjct: 6023309 cctcggcgaggtcgcgcttgcg 6023288
>emb|BX510342.7| Zebrafish DNA sequence from clone DKEY-15I15 in linkage group 2, complete sequence Length = 186711 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1356 attccagttgcactcttttttg 1377 |||||||||||||||||||||| Sbjct: 85035 attccagttgcactcttttttg 85014
>ref|XM_707902.1| Candida albicans SC5314 putative oxysterol-binding protein (CaO19.8897), mRNA Length = 2535 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 609 ttttcaaagtttctgcagtgtc 630 |||||||||||||||||||||| Sbjct: 2341 ttttcaaagtttctgcagtgtc 2320
>ref|XM_704865.1| Candida albicans SC5314 putative oxysterol-binding protein (CaO19.1317), mRNA Length = 2535 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 609 ttttcaaagtttctgcagtgtc 630 |||||||||||||||||||||| Sbjct: 2341 ttttcaaagtttctgcagtgtc 2320
>dbj|AK096490.1| Homo sapiens cDNA FLJ39171 fis, clone OCBBF2003052 Length = 2777 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 158 gcggcagcggtggtggagggag 179 |||||||||||||||||||||| Sbjct: 32 gcggcagcggtggtggagggag 53
>gb|AE014818.1| Plasmodium falciparum 3D7 chromosome 14 section 3 of 13 of the complete sequence Length = 252632 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1722 ttattttctttttcttggtata 1743 |||||||||||||||||||||| Sbjct: 47452 ttattttctttttcttggtata 47473
>gb|AC100771.2| Homo sapiens chromosome 11, clone RP11-159H22, complete sequence Length = 177819 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Minus Query: 112 gcagggggaacagtcacaaggaggtgcccc 141 |||||||||||||||||| |||||| |||| Sbjct: 36789 gcagggggaacagtcacatggaggtccccc 36760
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Plus Query: 157 agcggcagcggtggtggagggaggcggcgg 186 |||||| |||| |||||||||||||||||| Sbjct: 22595008 agcggcggcggcggtggagggaggcggcgg 22595037
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 1.7 Identities = 61/74 (82%) Strand = Plus / Plus Query: 282 cacctcggcgaggtcgcgcttgcgggcgccgccatcgccaactccctcaccaacgtctcc 341 |||||||||||| || | || || ||||| |||| ||||||||| |||||| |||| || Sbjct: 17004639 cacctcggcgagctccccctcgccggcgcttccatggccaactccttcaccaccgtcacc 17004698 Query: 342 ggtttcagcgtcct 355 || |||||| |||| Sbjct: 17004699 ggcttcagcctcct 17004712
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1691 agtttggtggtggactggtggt 1712 |||||||||||||||||||||| Sbjct: 19935824 agtttggtggtggactggtggt 19935803 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 158 gcggcagcggtggtggagggaggcggcgg 186 ||||| ||||||| ||||||||||||||| Sbjct: 2037724 gcggcggcggtggaggagggaggcggcgg 2037752
>emb|AL096711.9|HSJ403A15 Human DNA sequence from clone RP3-403A15 on chromosome 6q22.31-23.1 Contains the 3' end of a novel gene, the gene KIAA0408, a 60S Ribosomal protein L23 (RPL23) pseudogene and two CpG islands, complete sequence Length = 83709 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 158 gcggcagcggtggtggagggag 179 |||||||||||||||||||||| Sbjct: 81887 gcggcagcggtggtggagggag 81866
>gb|AY028962.1| Bacillus caldotenax DNA repair protein UvrA (uvrA) gene, complete cds Length = 2859 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 57 ttggtccgggggcgggcatcca 78 |||||||||||||||||||||| Sbjct: 1673 ttggtccgggggcgggcatcca 1694
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 57 ttggtccgggggcgggcatcca 78 |||||||||||||||||||||| Sbjct: 3105153 ttggtccgggggcgggcatcca 3105132
>dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0508B05 Length = 166165 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1691 agtttggtggtggactggtggt 1712 |||||||||||||||||||||| Sbjct: 113425 agtttggtggtggactggtggt 113404
>emb|BX537344.8| Zebrafish DNA sequence from clone RP71-34B6 in linkage group 2, complete sequence Length = 174019 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1356 attccagttgcactcttttttg 1377 |||||||||||||||||||||| Sbjct: 83750 attccagttgcactcttttttg 83729
>dbj|AP006048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1423D04 Length = 154474 Score = 44.1 bits (22), Expect = 1.7 Identities = 61/74 (82%) Strand = Plus / Plus Query: 282 cacctcggcgaggtcgcgcttgcgggcgccgccatcgccaactccctcaccaacgtctcc 341 |||||||||||| || | || || ||||| |||| ||||||||| |||||| |||| || Sbjct: 137661 cacctcggcgagctccccctcgccggcgcttccatggccaactccttcaccaccgtcacc 137720 Query: 342 ggtttcagcgtcct 355 || |||||| |||| Sbjct: 137721 ggcttcagcctcct 137734
>dbj|AP005967.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1089G05 Length = 161420 Score = 44.1 bits (22), Expect = 1.7 Identities = 61/74 (82%) Strand = Plus / Plus Query: 282 cacctcggcgaggtcgcgcttgcgggcgccgccatcgccaactccctcaccaacgtctcc 341 |||||||||||| || | || || ||||| |||| ||||||||| |||||| |||| || Sbjct: 5491 cacctcggcgagctccccctcgccggcgcttccatggccaactccttcaccaccgtcacc 5550 Query: 342 ggtttcagcgtcct 355 || |||||| |||| Sbjct: 5551 ggcttcagcctcct 5564
>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014M17 Length = 156778 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1691 agtttggtggtggactggtggt 1712 |||||||||||||||||||||| Sbjct: 39945 agtttggtggtggactggtggt 39924
>emb|AJ337466.1|HSA337466 Homo sapiens genomic sequence surrounding NotI site, clone NR5-KM10C Length = 603 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 158 gcggcagcggtggtggagggag 179 |||||||||||||||||||||| Sbjct: 103 gcggcagcggtggtggagggag 82
>emb|AJ326196.1|HSA326196 Homo sapiens genomic sequence surrounding NotI site, clone NL1-CJ12C Length = 640 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 158 gcggcagcggtggtggagggag 179 |||||||||||||||||||||| Sbjct: 103 gcggcagcggtggtggagggag 82
>emb|AL954871.5|CNS08CDA Oryza sativa chromosome 12, . BAC OSJNBb0085B24 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131441 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Plus Query: 157 agcggcagcggtggtggagggaggcggcgg 186 |||||| |||| |||||||||||||||||| Sbjct: 97587 agcggcggcggcggtggagggaggcggcgg 97616
>emb|AL845342.2|CNS08CB4 Oryza sativa chromosome 12, . BAC OSJNBa0027H05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138368 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Plus Query: 157 agcggcagcggtggtggagggaggcggcgg 186 |||||| |||| |||||||||||||||||| Sbjct: 40248 agcggcggcggcggtggagggaggcggcgg 40277
>gb|BC020441.1| Homo sapiens chromosome 6 open reading frame 174, mRNA (cDNA clone IMAGE:3867603) Length = 1266 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 158 gcggcagcggtggtggagggag 179 |||||||||||||||||||||| Sbjct: 1164 gcggcagcggtggtggagggag 1185
>ref|NM_001012279.1| Homo sapiens chromosome 6 open reading frame 174 (C6orf174), mRNA Length = 3556 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 158 gcggcagcggtggtggagggag 179 |||||||||||||||||||||| Sbjct: 810 gcggcagcggtggtggagggag 831
>ref|NM_001052371.1| Oryza sativa (japonica cultivar-group) Os02g0138200 (Os02g0138200) mRNA, complete cds Length = 2106 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 158 gcggcagcggtggtggagggaggcggcgg 186 ||||| ||||||| ||||||||||||||| Sbjct: 195 gcggcggcggtggaggagggaggcggcgg 223
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 480 gccattgtatgggttttcatt 500 ||||||||||||||||||||| Sbjct: 22368392 gccattgtatgggttttcatt 22368412
>gb|AC140465.2| Mus musculus BAC clone RP24-389J3 from chromosome 16, complete sequence Length = 189550 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 678 gtatttattcctctgtgttggttca 702 ||||||||| ||||||||||||||| Sbjct: 75740 gtatttatttctctgtgttggttca 75764
>gb|AF235103.5| Homo sapiens chromosome 8 multiple clones map q24.3, complete sequence Length = 345524 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1714 ttttactgttattttcttttt 1734 ||||||||||||||||||||| Sbjct: 30774 ttttactgttattttcttttt 30794
>gb|AF186192.5| Homo sapiens chromosome 8 clone XX-P7B3, RP4-698E23 map qtel, complete sequence Length = 145247 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1714 ttttactgttattttcttttt 1734 ||||||||||||||||||||| Sbjct: 115296 ttttactgttattttcttttt 115316
>gb|AC009366.8| Drosophila melanogaster 3L BAC RP98-48E10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169841 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 480 gccattgtatgggttttcatt 500 ||||||||||||||||||||| Sbjct: 118736 gccattgtatgggttttcatt 118756
>gb|AC023676.4| Drosophila melanogaster 3L BAC RP98-22C11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179613 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 480 gccattgtatgggttttcatt 500 ||||||||||||||||||||| Sbjct: 72266 gccattgtatgggttttcatt 72286
>gb|U93215.3| Arabidopsis thaliana chromosome 2 BAC T6B20 genomic sequence, complete sequence Length = 104861 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1721 gttattttctttttcttggtataga 1745 |||||||||||||||||||| |||| Sbjct: 86251 gttattttctttttcttggtttaga 86227
>gb|AC105924.4| Homo sapiens BAC clone RP11-706F1 from 4, complete sequence Length = 160050 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1363 ttgcactcttttttggtttta 1383 ||||||||||||||||||||| Sbjct: 128211 ttgcactcttttttggtttta 128191
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggtggagggaggcggcggaggagtccggc 197 ||||| ||||||||| ||||||||||||| Sbjct: 16146243 ggtggggggaggcgggggaggagtccggc 16146271
>emb|CR926469.19| Zebrafish DNA sequence from clone DKEY-196J8 in linkage group 13, complete sequence Length = 104871 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1719 ctgttattttctttttcttgg 1739 ||||||||||||||||||||| Sbjct: 27728 ctgttattttctttttcttgg 27748
>gb|AC105269.2| Homo sapiens chromosome 1 clone RP4-788P17, complete sequence Length = 120910 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1745 attgttttattgttttgtgtg 1765 ||||||||||||||||||||| Sbjct: 82050 attgttttattgttttgtgtg 82070
>emb|BX649567.3| Human DNA sequence from clone RP11-195B21 on chromosome 9 Contains a novel pseudogene, the gene for a novel protein similar to ankyrin repeat domain 20A (ANKRD20A), a novel gene and a CpG island, complete sequence Length = 99502 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1714 ttttactgttattttcttttt 1734 ||||||||||||||||||||| Sbjct: 28452 ttttactgttattttcttttt 28472
>emb|AL591463.7| Human DNA sequence from clone RP11-275A6 on chromosome 1 Contains the 3' end of a novel gene and a novel gene, complete sequence Length = 186710 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1745 attgttttattgttttgtgtg 1765 ||||||||||||||||||||| Sbjct: 31192 attgttttattgttttgtgtg 31212
>emb|AL442128.7| Human DNA sequence from clone RP11-365P13 on chromosome 13 Contains the 5' end of a novel gene (FLJ20093), an ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase) (ADPRT) pseudogene, a novel gene and a CpG island, complete sequence Length = 155026 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1560 catgtcaaaattttgatgagc 1580 ||||||||||||||||||||| Sbjct: 101672 catgtcaaaattttgatgagc 101652
>ref|XM_679448.1| PREDICTED: Danio rerio similar to LOC446973 protein (LOC556607), mRNA Length = 1152 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 cgctgctgcagctgatgatgc 255 ||||||||||||||||||||| Sbjct: 65 cgctgctgcagctgatgatgc 45
>emb|CR759918.11| Zebrafish DNA sequence from clone CH211-278M11 in linkage group 15, complete sequence Length = 160374 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1745 attgttttattgttttgtgtg 1765 ||||||||||||||||||||| Sbjct: 108436 attgttttattgttttgtgtg 108456
>emb|CR626941.10| Zebrafish DNA sequence from clone DKEY-12J5 in linkage group 16, complete sequence Length = 238554 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 676 ctgtatttattcctctgtgttggttcatg 704 |||||||||||||||| |||| ||||||| Sbjct: 208534 ctgtatttattcctctctgttagttcatg 208506
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 gaggcggcggaggagtccggc 197 ||||||||||||||||||||| Sbjct: 241722 gaggcggcggaggagtccggc 241742
>ref|NM_001031531.1| Gallus gallus similar to RIKEN cDNA 5530600A18 (LOC428678), mRNA emb|AJ720204.1| Gallus gallus mRNA for hypothetical protein, clone 12j7 Length = 2988 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 672 ctcgctgtatttattcctctg 692 ||||||||||||||||||||| Sbjct: 2076 ctcgctgtatttattcctctg 2056
>emb|CR559930.6| Zebrafish DNA sequence from clone CH211-186E20 in linkage group 5, complete sequence Length = 151158 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 cgctgctgcagctgatgatgc 255 ||||||||||||||||||||| Sbjct: 2042 cgctgctgcagctgatgatgc 2022
>emb|AL928772.8| Mouse DNA sequence from clone RP23-247I15 on chromosome 4 Contains the 3' end of a novel gene and a novel gene, complete sequence Length = 174731 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 815 gaaaacacgtgctccactcac 835 ||||||||||||||||||||| Sbjct: 17834 gaaaacacgtgctccactcac 17814
>emb|CR450846.7| Zebrafish DNA sequence from clone DKEY-99O2 in linkage group 5, complete sequence Length = 29852 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 cgctgctgcagctgatgatgc 255 ||||||||||||||||||||| Sbjct: 16076 cgctgctgcagctgatgatgc 16056
>gb|AF367967.1|AF367967S1 Mus musculus survival of motor neuron protein (Smn) gene, partial cds; and neuronal apoptosis inhibitory protein 2 (Naip2) gene, exon 16 Length = 20021 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 568 ggcttatccctggtttatttgcctt 592 ||||| ||||||||||||||||||| Sbjct: 12320 ggcttctccctggtttatttgcctt 12344
>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0026E05 Length = 159860 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 158 gcggcagcggtggtggagggaggcggcgg 186 ||||| ||||||| ||||||||||||||| Sbjct: 87932 gcggcggcggtggaggagggaggcggcgg 87960
>dbj|AP005726.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0028A18 Length = 151080 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggtggagggaggcggcggaggagtccggc 197 ||||| ||||||||| ||||||||||||| Sbjct: 84323 ggtggggggaggcgggggaggagtccggc 84351
>emb|CR389589.1| Gallus gallus finished cDNA, clone ChEST861h18 Length = 1149 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 672 ctcgctgtatttattcctctg 692 ||||||||||||||||||||| Sbjct: 254 ctcgctgtatttattcctctg 234
>emb|CR387603.1| Gallus gallus finished cDNA, clone ChEST49d17 Length = 1169 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ctcgctgtatttattcctctg 692 ||||||||||||||||||||| Sbjct: 70 ctcgctgtatttattcctctg 90
>dbj|AK064810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D21, full insert sequence Length = 2109 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 158 gcggcagcggtggtggagggaggcggcgg 186 ||||| ||||||| ||||||||||||||| Sbjct: 196 gcggcggcggtggaggagggaggcggcgg 224
>ref|XM_310783.2| Anopheles gambiae str. PEST ENSANGP00000015598 (ENSANGG00000013109), partial mRNA Length = 5214 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 192 tccggccggctggctgcgctggctg 216 |||||| |||||||||||||||||| Sbjct: 619 tccggcgggctggctgcgctggctg 595
>gb|AF131205.1|AF131205 Mus musculus Serf1 protein (Serf1), survival of motor neuron protein (Smn), neuronal apoptosis inhibitory protein-rs6 (Naip-rs6), and neuronal apoptosis inhibitory protein-rs3 (Naip-rs3) genes, complete cds Length = 179252 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 568 ggcttatccctggtttatttgcctt 592 ||||| ||||||||||||||||||| Sbjct: 63351 ggcttctccctggtttatttgcctt 63375
>gb|AY105338.1| Zea mays PCO102700 mRNA sequence Length = 1951 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1695 tggtggtggactggtggtgtt 1715 ||||||||||||||||||||| Sbjct: 31 tggtggtggactggtggtgtt 11
>emb|CT030167.8| Mouse DNA sequence from clone RP23-333E24 on chromosome 13, complete sequence Length = 192930 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 568 ggcttatccctggtttatttgcctt 592 ||||| ||||||||||||||||||| Sbjct: 118304 ggcttctccctggtttatttgcctt 118328
>gb|M26676.1|CHKHMG17B Gallus gallus HMG-17 protein gene, complete cds Length = 1303 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 194 cggccggctggctgcgctggctgcg 218 ||||||||| ||||||||||||||| Sbjct: 31 cggccggctcgctgcgctggctgcg 7 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 340,833,934 Number of extensions: 19192098 Number of successful extensions: 458320 Number of sequences better than 10.0: 103 Number of HSP's gapped: 458308 Number of HSP's successfully gapped: 127 Length of query: 1793 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1770 Effective length of database: 18,503,978,556 Effective search space: 32752042044120 Effective search space used: 32752042044120 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
