ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf168n02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os03g0621600:Os03g0621600 32 1.9
2Os02g0136000:Os02g0136000 32 1.9
3AK111229: 32 2.4
4AK107414: 32 2.4
5AK108102: 32 3.2

>Os03g0621600:Os03g0621600 |
          Length = 1029
 Score = 32.3 bits (72), Expect = 1.9
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = -3

Query: 1951 KRTNSY*PDTATDTQQRFAYVGTDFLNKSCSATHTLIGRPT 1829
            KRT+   P++  +   R+ Y+GT F + +CS T +LIG P+
Sbjct: 59   KRTH---PNSIFNQLVRYGYIGTGFPDMNCSLTWSLIGGPS 96



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>Os02g0136000:Os02g0136000 |
          Length = 750

 Score = 32.3 bits (72), Expect = 1.9
 Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
 Frame = +2

Query: 248 RRFCSDFCVMRGPKQGQFPV---LDRSDRFLGSVTCLPSSAIS-DLDPVGRLSPVRPAPD 415
           +R C    + R P +    V   LD+  R + SV C PS  ++    P   L P  P P 
Sbjct: 544 KRICRQHGIPRWPFRKISKVNRSLDKMKRVMESVNCSPSPPVAMPAHPALLLPPPPPPPR 603

Query: 416 PALSSRVPSSS 448
           P LSS V  +S
Sbjct: 604 PCLSSTVGETS 614



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>AK111229: |
          Length = 732

 Score = 32.0 bits (71), Expect = 2.4
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = +2

Query: 401 RPAPDPALSSRVPSSSVNNTRWIRRPRGF*ILPADPAF 514
           RP+P P   +RVP+   N+ R I  P GF I P  PAF
Sbjct: 74  RPSPAPWQQNRVPTPVSNSPRTINPPPGFGIAP--PAF 109



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>AK107414: |
          Length = 577

 Score = 32.0 bits (71), Expect = 2.4
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -2

Query: 2273 SPTPNIIPGDL*PYETKPPSFRFIYAEPLPASAASEGA 2160
            SP PN +PGDL P + + PS R +   P P+  + +G+
Sbjct: 120  SPAPNSLPGDLGPNDPRRPSSRNV--SPAPSGHSRQGS 155



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>AK108102: |
          Length = 317

 Score = 31.6 bits (70), Expect = 3.2
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = +3

Query: 2043 LPVWSSSSHHEFHHNQ----YKVD*RYWWILIVAVDLAF 2147
            +P W+ + HH++HH      Y    R WW   +  DL++
Sbjct: 253  IPFWAGADHHDYHHQAFVGCYSTSFR-WWDSFMGTDLSY 290


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 74,775,289
Number of extensions: 1634808
Number of successful extensions: 4617
Number of sequences better than 10.0: 5
Number of HSP's gapped: 4613
Number of HSP's successfully gapped: 5
Length of query: 942
Length of database: 15,399,855
Length adjustment: 110
Effective length of query: 832
Effective length of database: 10,995,345
Effective search space: 9148127040
Effective search space used: 9148127040
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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