ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf170o17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK121033:Os11g0107500 175 5e-44
2Os12g0107500:Os12g0107500 157 3e-39
3AK120103:Os06g0699500 96 5e-20
4AK062047:Os06g0699500 96 5e-20
5Os01g0968600:Os01g0968600 30 2.0
6AK120834:Os04g0625800 28 7.7

>AK121033:Os11g0107500 |
          Length = 121
 Score =  175 bits (443), Expect = 5e-44
 Identities = 101/151 (66%), Positives = 105/151 (69%)
 Frame = +3

Query: 90  MPCLNVSTNVNLEGVDTSAVLADASSTVATIIGKPEAYVMVVLKGSVPMAFGGTQEPAAY 269
           MPCLNVSTNVNL+GVDTSAVLADAS TVATIIGKPEAYVMVVLKGSVPMAFGGTQEPAAY
Sbjct: 1   MPCLNVSTNVNLDGVDTSAVLADASKTVATIIGKPEAYVMVVLKGSVPMAFGGTQEPAAY 60

Query: 270 GELVSIGGLNPDVNKKLSAGICFHPGVKAVHLQVPLLPQVP*FKGKQTLFVSDCSSMGLG 449
           GELVSIGGLNPDVNKKLSAGI     +    L +P        KG+  L   D       
Sbjct: 61  GELVSIGGLNPDVNKKLSAGIA---SILESKLSIP--------KGRFYLKFYDSK----- 104

Query: 450 QTSSCSHCISAVC*AHPAQEHAQCLHALHQE 542
                         AH AQEHAQCLHALHQE
Sbjct: 105 --------------AHRAQEHAQCLHALHQE 121



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>Os12g0107500:Os12g0107500 |
          Length = 106

 Score =  157 bits (396), Expect(2) = 3e-39
 Identities = 79/81 (97%), Positives = 80/81 (98%)
 Frame = +3

Query: 90  MPCLNVSTNVNLEGVDTSAVLADASSTVATIIGKPEAYVMVVLKGSVPMAFGGTQEPAAY 269
           MPCLNVSTNVNL+GVDTSAVLADAS TVATIIGKPEAYVMVVLKGSVPMAFGGTQEPAAY
Sbjct: 1   MPCLNVSTNVNLDGVDTSAVLADASKTVATIIGKPEAYVMVVLKGSVPMAFGGTQEPAAY 60

Query: 270 GELVSIGGLNPDVNKKLSAGI 332
           GELVSIGGLNPDVNKKLSAGI
Sbjct: 61  GELVSIGGLNPDVNKKLSAGI 81



 Score = 23.9 bits (50), Expect(2) = 3e-39
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +1

Query: 373 RFYLKFHDSK 402
           RFYLKF+DSK
Sbjct: 95  RFYLKFYDSK 104



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>AK120103:Os06g0699500 |
          Length = 115

 Score = 95.5 bits (236), Expect = 5e-20
 Identities = 45/81 (55%), Positives = 62/81 (76%)
 Frame = +3

Query: 90  MPCLNVSTNVNLEGVDTSAVLADASSTVATIIGKPEAYVMVVLKGSVPMAFGGTQEPAAY 269
           MP L+++TNV ++ V  + ++ D S  +A IIGKPE+YVMV + GSVPM+F  ++EPAAY
Sbjct: 1   MPQLSLTTNVPVDAVVAADIIKDCSKALARIIGKPESYVMVSISGSVPMSFAASEEPAAY 60

Query: 270 GELVSIGGLNPDVNKKLSAGI 332
           GEL+SIGG+ P VN KLSA +
Sbjct: 61  GELMSIGGIGPGVNGKLSAAL 81



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>AK062047:Os06g0699500 |
          Length = 115

 Score = 95.5 bits (236), Expect = 5e-20
 Identities = 45/81 (55%), Positives = 62/81 (76%)
 Frame = +3

Query: 90  MPCLNVSTNVNLEGVDTSAVLADASSTVATIIGKPEAYVMVVLKGSVPMAFGGTQEPAAY 269
           MP L+++TNV ++ V  + ++ D S  +A IIGKPE+YVMV + GSVPM+F  ++EPAAY
Sbjct: 1   MPQLSLTTNVPVDAVVAADIIKDCSKALARIIGKPESYVMVSISGSVPMSFAASEEPAAY 60

Query: 270 GELVSIGGLNPDVNKKLSAGI 332
           GEL+SIGG+ P VN KLSA +
Sbjct: 61  GELMSIGGIGPGVNGKLSAAL 81



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>Os01g0968600:Os01g0968600 |
          Length = 640

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 435 SMGLGQTSSCSHCISAVC*AHPAQEHAQCLHAL 533
           S G G   SC+H I  +C ++P     +C H +
Sbjct: 311 SYGFGYKKSCNHSIQTLCNSNPLDSMDECRHVM 343



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>AK120834:Os04g0625800 |
          Length = 425

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = +3

Query: 228 VPMAFGGTQEPAAYGELVSIGGLNPDVNKKLSAGICFHPGVKAVHLQVPL 377
           VP A G   E       + +GGL+P+V + +   + F P  + VH+++P+
Sbjct: 269 VPNAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQV-FAPYGEVVHVKIPV 317


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 24,767,417
Number of extensions: 499965
Number of successful extensions: 1223
Number of sequences better than 10.0: 6
Number of HSP's gapped: 1221
Number of HSP's successfully gapped: 8
Length of query: 330
Length of database: 15,399,855
Length adjustment: 101
Effective length of query: 229
Effective length of database: 11,355,714
Effective search space: 2600458506
Effective search space used: 2600458506
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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