ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf170o02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os07g0621900:Os07g0621900 31 3.7
2AK105426:Os06g0703300 30 4.9
3AK102730:Os06g0703300 30 4.9
4Os03g0738900:Os03g0738900 30 6.4
5AK122164:Os02g0105100 30 6.4

>Os07g0621900:Os07g0621900 |
          Length = 220
 Score = 30.8 bits (68), Expect = 3.7
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = -1

Query: 152 GEANRPPQERQHRIRMAQRAPPKRRDNP*DLTIPATERRWAAPA 21
           G ANRP   R H +  A+R P   R  P  + +PA+ RR A  A
Sbjct: 21  GGANRP--HRSHALPRARRCPSSLRPPPPIIALPASRRRSARRA 62



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>AK105426:Os06g0703300 |
          Length = 811

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 18/39 (46%), Positives = 23/39 (58%)
 Frame = +3

Query: 642 VEIARELSICSYFARVLHPAMVSLSSPVLLFPRHHLKCA 758
           +EIARELS   Y+  V+HP M+S SS  +   R    CA
Sbjct: 629 MEIARELSNYLYYIMVVHPLMLS-SSTTMAIKRCRDTCA 666



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>AK102730:Os06g0703300 |
          Length = 811

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 18/39 (46%), Positives = 23/39 (58%)
 Frame = +3

Query: 642 VEIARELSICSYFARVLHPAMVSLSSPVLLFPRHHLKCA 758
           +EIARELS   Y+  V+HP M+S SS  +   R    CA
Sbjct: 629 MEIARELSNYLYYIMVVHPLMLS-SSTTMAIKRCRDTCA 666



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>Os03g0738900:Os03g0738900 |
          Length = 632

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 186 FCDILLVMAESVDASDPSAYAAVDVYLRGTP 278
           FC++ L + +     D   Y AVD+YL+  P
Sbjct: 400 FCELALALPDHARVYDDGVYRAVDIYLKAHP 430



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>AK122164:Os02g0105100 |
          Length = 683

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = +1

Query: 259 FISGERRRRCCFIFTGL*CPRPTDIFSNDSRYAFSRSSHLSEAPEGSGSSDIW 417
           F+SG   R  C +  G    +P D+F+ D+  + +  S     P  +G  D W
Sbjct: 55  FLSGSPLRTLCLLIAG----QPADVFNADNNISSNYGSQQPMEPSPNGMLDDW 103


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 56,360,854
Number of extensions: 1245544
Number of successful extensions: 2798
Number of sequences better than 10.0: 5
Number of HSP's gapped: 2798
Number of HSP's successfully gapped: 5
Length of query: 673
Length of database: 15,399,855
Length adjustment: 107
Effective length of query: 566
Effective length of database: 11,115,468
Effective search space: 6291354888
Effective search space used: 6291354888
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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