ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf170o02 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os03g12670:12003.t01065:unspliced-genomic expressed protein| Length = 2722 Score = 40.0 bits (81), Expect = 0.059 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = +3 / +3 Query: 567 GLCHVGCARLAGHKTIKSIF 626 GLCHVGCAR+AGH+ +F Sbjct: 741 GLCHVGCARMAGHRNKDDLF 800 Score = 39.1 bits (79), Expect = 0.11 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = -2 / -1 Query: 613 IVLWPAKRAHPTWQRP 566 ++ WPA RAHPTWQRP Sbjct: 787 LLRWPAMRAHPTWQRP 740
>LOC_Os03g52880:12003.t04610:unspliced-genomic transposon protein, putative, Mutator sub-class, expressed| Length = 3031 Score = 33.1 bits (66), Expect(2) = 0.13 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +3 / +1 Query: 186 FCDILLVMAESVDASDPSAYAAVDVYLRGTP 278 FC++ L + + D Y AVD+YL+ P Sbjct: 1663 FCELALALPDHARVYDDGVYRAVDIYLKAHP 1755 Score = 23.1 bits (44), Expect(2) = 0.13 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = +1 / +3 Query: 10 HRPVAGAAHLRSVAGIVRSHG 72 HR AGA +VA + R HG Sbjct: 1530 HRGGAGAGSHDAVAAVRRGHG 1592
>LOC_Os12g15470:12012.t01402:unspliced-genomic serine carboxypeptidase 1 precursor, putative, expressed| Length = 5108 Score = 31.8 bits (63), Expect(2) = 0.70 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -3 / +3 Query: 654 VRSPPRKHHQIYFLLSCGLPSERTRHGKGRPTLPMY 547 +R+P HH + LP+ RT G+ RP LP + Sbjct: 39 IRAPQLSHHHRGLHCATLLPTTRTIDGQARPPLPCF 146 Score = 28.6 bits (56), Expect(2) = 0.70 Identities = 15/49 (30%), Positives = 22/49 (44%) Frame = -1 / +3 Query: 236 RV*RINRFSHHKQNVTKSLGLRDRRHVFGEANRPPQERQHRIRMAQRAP 90 R+ R+ R ++++ G R R G RPP E R+R AP Sbjct: 171 RLPRLRRRRRRRRSMRGRAGERGREERPGIRRRPPVEALRRVRTRASAP 317
>LOC_Os03g13180:12003.t01113:unspliced-genomic peroxidase 54 precursor, putative, expressed| Length = 1544 Score = 36.3 bits (73), Expect = 0.75 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = +1 / +2 Query: 979 TWWTSAFIFWFDPKNDNSEIPTGKPLMQHRPENFLVH 1089 TWWT++ + W P +S PT P P ++ VH Sbjct: 521 TWWTASRLPWRTPAPASSPAPTSSPSPPRSPSSWSVH 631
>LOC_Os06g32920:12006.t02989:unspliced-genomic hypothetical protein| Length = 2212 Score = 34.5 bits (69), Expect(2) = 0.81 Identities = 13/19 (68%), Positives = 16/19 (84%) Frame = +1 / +2 Query: 1726 MDFVLTNLILVSRLI*IGW 1782 + +VLTNL+LVSR I IGW Sbjct: 1415 LSYVLTNLVLVSRFISIGW 1471 Score = 24.4 bits (47), Expect(2) = 0.81 Identities = 9/16 (56%), Positives = 9/16 (56%) Frame = +1 / +2 Query: 553 W*GRTAFAMSGALAWQ 600 W GRT F S A WQ Sbjct: 725 WFGRTTFVASQAQPWQ 772
>LOC_Os04g47150:12004.t04242:unspliced-genomic subtilisin-like protease precursor, putative, expressed| Length = 2896 Score = 35.4 bits (71), Expect = 1.4 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -1 / +1 Query: 194 VTKSLGLRDRRHVFGEANRPPQERQHRIRMAQRAPPKR 81 V + GLR RRH G RP R+H + +A+R +R Sbjct: 901 VLRGEGLRPRRHTGGGGRRPRGRRRHPVAVARRRAGRR 1014
>LOC_Os04g33740:12004.t03050:unspliced-genomic beta-fructofuranosidase, insoluble isoenzyme 2 precursor, putative,| expressed Length = 4892 Score = 35.4 bits (71), Expect = 1.4 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -2 / -2 Query: 631 PPNILFIVLWPAKRAHPTWQRPSYPTNVLVHQV 533 P L ++ WP ++ PTW +P +P N L H + Sbjct: 2749 PSQPLDLLDWPLQQLLPTWVQPHFPRNRLKHHI 2651
>LOC_Os01g73200:12001.t06602:unspliced-genomic peroxidase 12 precursor, putative, expressed| Length = 1296 Score = 35.0 bits (70), Expect = 1.9 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = -3 / +1 Query: 705 PWQGGEPGQNRNK*IVPVRSPPRKHHQIYFLLSCGLPSERTRHGK 571 P G+ R + P+R R+H ++FL LPS R HG+ Sbjct: 619 PRSAGQAQARRPRPRRPLRRAHRRHRALHFLRQAPLPSSRPHHGQ 753
>LOC_Os04g49460:12004.t04461:unspliced-genomic ATP binding protein, putative, expressed| Length = 1196 Score = 22.6 bits (43), Expect(3) = 2.5 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = -1 / -3 Query: 137 PPQERQHRIRMAQRAPP 87 PP+ R+ R R +R PP Sbjct: 765 PPEPRRTRHRAPRRPPP 715 Score = 22.6 bits (43), Expect(3) = 2.5 Identities = 8/18 (44%), Positives = 9/18 (50%) Frame = -3 / -3 Query: 66 RSHDPRDGTKMGRSCDGA 13 R H P G RSC G+ Sbjct: 648 RGHAPAGGCGTSRSCSGS 595 Score = 22.1 bits (42), Expect(3) = 2.5 Identities = 10/33 (30%), Positives = 20/33 (60%) Frame = -1 / -1 Query: 350 RLSLEKISVGRGHHKPVKMKQQRRRRSPEINIH 252 +L L ++VGR + + + + RRR S + ++H Sbjct: 935 QLDLLPLAVGRPNKRRLLERWLRRRGSADQHLH 837
>LOC_Os04g42730:12004.t03819:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5672 Score = 34.5 bits (69), Expect = 2.7 Identities = 13/22 (59%), Positives = 18/22 (81%) Frame = +1 / +2 Query: 1078 FLVHLNIRFILPWCVHNLVVLR 1143 F+V+LN+R IL W VH +V+LR Sbjct: 2942 FMVYLNLRKILIWFVHRVVMLR 3007
>LOC_Os04g02060:12004.t00103:unspliced-genomic hypothetical protein| Length = 940 Score = 34.5 bits (69), Expect = 2.7 Identities = 12/17 (70%), Positives = 15/17 (88%) Frame = +3 / +1 Query: 1911 LSLKCDWIGEVSLKRLG 1961 L+LKC W+GEV+LK LG Sbjct: 604 LALKCGWVGEVALKDLG 654
>LOC_Os03g22320:12003.t01983:unspliced-genomic utp14 protein, expressed| Length = 5044 Score = 28.6 bits (56), Expect(2) = 3.4 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 / -1 Query: 167 RRHVFGEANRPPQERQHRIRMAQRAPPKRRDNP 69 RR G ++RPP +R PP+RR P Sbjct: 412 RRRRSGRSSRPPPRGPLPRTRTRRVPPRRRTRP 314 Score = 22.6 bits (43), Expect(2) = 3.4 Identities = 11/26 (42%), Positives = 12/26 (46%) Frame = -1 / -1 Query: 92 PPKRRDNP*DLTIPATERRWAAPATG 15 PP+ R NP PA AAP G Sbjct: 316 PPRPRRNPSRCRAPARRAAGAAPWGG 239
>LOC_Os11g20470:12011.t01816:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5699 Score = 34.1 bits (68), Expect = 3.7 Identities = 13/22 (59%), Positives = 18/22 (81%) Frame = +1 / +1 Query: 1078 FLVHLNIRFILPWCVHNLVVLR 1143 F+V+LN+R IL W VH +V+LR Sbjct: 2944 FVVYLNLRKILIWFVHRVVMLR 3009
>LOC_Os10g01870:12010.t00083:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2050 Score = 34.1 bits (68), Expect = 3.7 Identities = 15/65 (23%), Positives = 28/65 (43%) Frame = -1 / -3 Query: 206 HKQNVTKSLGLRDRRHVFGEANRPPQERQHRIRMAQRAPPKRRDNP*DLTIPATERRWAA 27 H T+ R + G R + R+ R + + PP RR P++++RW + Sbjct: 2009 HSNRRTRWHNPRSHHRLVGSTPRSRRRRRPRQELLEPTPPCRRGQGEVFGAPSSQKRWLS 1830 Query: 26 PATGR 12 P+ + Sbjct: 1829 PSPAK 1815
>LOC_Os09g38960:12009.t03363:unspliced-genomic potassium transporter 11, putative, expressed| Length = 6250 Score = 34.1 bits (68), Expect = 3.7 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 1226 SSLCTAC*SSKFICILVDLRTGACPEVAGAS 1318 +S C +C*S +IC + D + CP V S Sbjct: 4282 NSSCNSC*SGHYICNIFDYQASTCPRVLSPS 4374
>LOC_Os08g28060:12008.t02563:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 4820 Score = 34.1 bits (68), Expect = 3.7 Identities = 13/22 (59%), Positives = 18/22 (81%) Frame = +1 / +2 Query: 1078 FLVHLNIRFILPWCVHNLVVLR 1143 F+V+LN+R IL W VH +V+LR Sbjct: 2306 FVVYLNLRKILIWFVHRVVMLR 2371
>LOC_Os07g33790:12007.t03057:unspliced-genomic glutamate receptor 3.4 precursor, putative, expressed| Length = 4848 Score = 34.1 bits (68), Expect = 3.7 Identities = 17/46 (36%), Positives = 21/46 (45%) Frame = -1 / -2 Query: 1808 LRTSHASKIHPIQINLLTKIKFVRTKSIQFLLEECKHKNEKSKGMY 1671 +R H K P + KIK K LEE K K E+S+G Y Sbjct: 3323 VREKHGRKTKPEMVQNSNKIKL*TNKQ*LLNLEEVKKKREESRGRY 3186
>LOC_Os12g02870:12012.t00180:unspliced-genomic DELLA protein GAI1, putative, expressed| Length = 3586 Score = 33.6 bits (67), Expect = 5.0 Identities = 16/50 (32%), Positives = 23/50 (46%) Frame = -1 / +1 Query: 218 RFSHHKQNVTKSLGLRDRRHVFGEANRPPQERQHRIRMAQRAPPKRRDNP 69 R HH + +SL LR R G A+ + R R + PP+R+ P Sbjct: 814 RHRHHPRRSPRSLPLRQRSPTSGVASLSVRSRSPTSRSRRSPPPRRKPPP 963
>LOC_Os11g27880:12011.t02402:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1882 Score = 33.6 bits (67), Expect = 5.0 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = +1 / +3 Query: 1078 FLVHLNIRFILPWCVHNLVVLRR 1146 F+V LN+R IL W VH +V+LRR Sbjct: 1521 FVVCLNLR*ILIWFVHRVVMLRR 1589
>LOC_Os08g26450:12008.t02411:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4974 Score = 33.6 bits (67), Expect = 5.0 Identities = 12/22 (54%), Positives = 18/22 (81%) Frame = +1 / +2 Query: 1078 FLVHLNIRFILPWCVHNLVVLR 1143 F+V+LN+R IL W VH +++LR Sbjct: 2888 FVVYLNLRKILIWFVHRVIMLR 2953
>LOC_Os08g16000:12008.t01474:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6988 Score = 33.6 bits (67), Expect = 5.0 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = -2 / -3 Query: 505 IISLPTQLPFCSVRRQTSR 449 I+S+PTQLP CSVR Q R Sbjct: 3413 ILSIPTQLPECSVRHQIHR 3357
>LOC_Os03g13420:12003.t01136:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4068 Score = 33.6 bits (67), Expect = 5.0 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = +1 / +1 Query: 1078 FLVHLNIRFILPWCVHNLVVLR 1143 F+V LN+R IL W VH +V+LR Sbjct: 2179 FMVRLNLRKILIWFVHRVVMLR 2244
>LOC_Os01g19340:12001.t01724:unspliced-genomic conserved hypothetical protein| Length = 420 Score = 33.6 bits (67), Expect = 5.0 Identities = 17/50 (34%), Positives = 21/50 (42%) Frame = -1 / -2 Query: 167 RRHVFGEANRPPQERQHRIRMAQRAPPKRRDNP*DLTIPATERRWAAPAT 18 RRH A PP R+H +A PP RR + P R P+T Sbjct: 233 RRHSAAIAVAPPPRRRHSAAIAVAPPPHRRHSAAIAVAPPPRRSPTTPST 84
>LOC_Os12g24650:12012.t02189:unspliced-genomic leucine aminopeptidase 1, chloroplast precursor, putative,| expressed Length = 5220 Score = 33.1 bits (66), Expect = 6.9 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -3 / +2 Query: 642 PRKHHQIYFLLSCGLPSERTRHGKGR 565 PR+ Q + +LSCGLP R H GR Sbjct: 800 PRRRWQQHAVLSCGLPEHRRDHRGGR 877
>LOC_Os11g27110:12011.t02326:unspliced-genomic expressed protein| Length = 1353 Score = 33.1 bits (66), Expect = 6.9 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = -1 / -1 Query: 179 GLRDRRHVFGEANRPPQERQHRIRMAQRAP 90 G R RR + GEA+R P+E++ R R+ + P Sbjct: 582 GARRRRRLDGEAHRSPREQRRRDRLERHKP 493
>LOC_Os10g30070:12010.t02341:unspliced-genomic sodium/potassium/calcium exchanger 6 precursor, putative, expressed| Length = 1918 Score = 33.1 bits (66), Expect = 6.9 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = -1 / +1 Query: 203 KQNVTKSLGLRDRRHVFGEANRPPQERQHRIRMAQRAPPKR 81 +Q + G DR H PP + +HR +A R PP+R Sbjct: 1108 EQGAVEQAGGGDRGHHGARPPLPPLQPRHRHHLAPRCPPRR 1230
>LOC_Os08g25450:12008.t02312:unspliced-genomic hypothetical protein| Length = 561 Score = 33.1 bits (66), Expect = 6.9 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -3 / -1 Query: 645 PPRKHHQIYFLLSCGLPSERTRH 577 PP KHH L C LPS +T H Sbjct: 243 PPPKHHSTMHLSHCRLPSRKTGH 175
>LOC_Os04g12060:12004.t01030:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 3755 Score = 33.1 bits (66), Expect = 6.9 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = -2 / +2 Query: 559 PTNVLVHQVVQYARPHMRIISLPTQLPFCSVRRQTSRKHG 440 P+ LV QV+ R H RI L QLP +++RQ + G Sbjct: 3230 PSRHLVRQVLPQLRRHQRIHRLREQLPRGALQRQQRHRQG 3349
>LOC_Os03g04870:12003.t00363:unspliced-genomic expressed protein| Length = 2737 Score = 33.1 bits (66), Expect = 6.9 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = -2 / +2 Query: 2011 FFTICSYSSFKLKKPLRPSRFRLTSPI 1931 +F +CSYS +LKKP PS + +P+ Sbjct: 1199 YFNVCSYSMEQLKKPNSPSISKYLTPL 1279
>LOC_Os01g47360:12001.t04184:unspliced-genomic GATA zinc finger family protein| Length = 890 Score = 33.1 bits (66), Expect = 6.9 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -1 / +3 Query: 512 HAHHQLTNTITFLQCSETDKQETRII 435 H H TNT +QC+ KQ TRI+ Sbjct: 462 HNIHNYTNTYKLMQCARVHKQHTRIL 539
>LOC_Os02g21620:12002.t01951:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7115 Score = 30.9 bits (61), Expect(2) = 7.3 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -2 / -3 Query: 517 PHMRIISLPTQLPFCSVRRQTSRKHGS 437 PH+ S PT LPF + QTSR G+ Sbjct: 1038 PHVNR*SSPTYLPFLPISTQTSRAAGN 958 Score = 26.3 bits (51), Expect(2) = 7.3 Identities = 8/13 (61%), Positives = 9/13 (69%) Frame = -3 / -3 Query: 273 FPGDKHPQRHKLT 235 FP D+HP H LT Sbjct: 138 FPADRHPSSHPLT 100
>LOC_Os06g04889:12006.t04909:unspliced-genomic expressed protein| Length = 855 Score = 26.3 bits (51), Expect(2) = 9.4 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = -1 / -2 Query: 314 HHKPVKMKQQRRRRSPEINI 255 HH P + QQR R+ P+ ++ Sbjct: 290 HHPPHRRHQQRERQQPDAHL 231 Score = 23.5 bits (45), Expect(2) = 9.4 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = -3 / -2 Query: 384 LAEMRRPRESISTVVGED 331 LAE RRP + + V G+D Sbjct: 377 LAERRRPAAAAAPVAGDD 324
>LOC_Os11g36280:12011.t03175:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 12369 Score = 32.7 bits (65), Expect = 9.5 Identities = 21/54 (38%), Positives = 23/54 (42%) Frame = -1 / +3 Query: 173 RDRRHVFGEANRPPQERQHRIRMAQRAPPKRRDNP*DLTIPATERRWAAPATGR 12 R RR G RP R HR R A RA P+R+ P R AA A R Sbjct: 7191 RRRRRRRGHPRRPRCGRHHRRRCAGRAAPRRQAAPRRRDATTLRRHDAAVARHR 7352
>LOC_Os11g31670:12011.t02764:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1641 Score = 32.7 bits (65), Expect = 9.5 Identities = 13/36 (36%), Positives = 15/36 (41%) Frame = -2 / -3 Query: 544 VHQVVQYARPHMRIISLPTQLPFCSVRRQTSRKHGS 437 +H+ VQ RPH P QLP C H S Sbjct: 1585 IHRTVQRCRPHQHQWEHPQQLPLCHPHHHHQHHHRS 1478
>LOC_Os11g28500:12011.t02462:unspliced-genomic ent-kaurene synthase-like protein 1, putative| Length = 2202 Score = 32.7 bits (65), Expect = 9.5 Identities = 12/30 (40%), Positives = 14/30 (46%) Frame = +2 / +3 Query: 575 PCRVRSLGRPQDNKKYIWWCLRGGDRTGTI 664 PC LG P KY W+ L G R G + Sbjct: 867 PCHSNELGNPCYQNKYRWYFLPSGGRIGNV 956
>LOC_Os10g36710:12010.t02949:unspliced-genomic CDPK-related protein kinase, putative, expressed| Length = 5156 Score = 32.7 bits (65), Expect = 9.5 Identities = 23/81 (28%), Positives = 27/81 (33%) Frame = -1 / +2 Query: 323 GRGHHKPVKMKQQRRRRSPEINIHSGIS*RV*RINRFSHHKQNVTKSLGLRDRRHVFGEA 144 GRG P ++ RRR P SG R R S G R R Sbjct: 236 GRGARSPRASHRRLRRRRPRRGGSSGGRSRRRRRRSTSRRPSRAASGSGRRPRPRRSRPR 415 Query: 143 NRPPQERQHRIRMAQRAPPKR 81 +RPP+ R PP R Sbjct: 416 SRPPRSRSRSTGAGAAPPPGR 478
>LOC_Os10g29570:12010.t02298:unspliced-genomic late embryogenesis abundant protein D-34, putative, expressed| Length = 1416 Score = 32.7 bits (65), Expect = 9.5 Identities = 18/53 (33%), Positives = 23/53 (43%) Frame = -1 / -3 Query: 173 RDRRHVFGEANRPPQERQHRIRMAQRAPPKRRDNP*DLTIPATERRWAAPATG 15 R RRH RP + R+ R R +R D P P + RR +AP G Sbjct: 253 RPRRHAPARRGRPARRRRLRRRRRRRRRRPAADRPRAPPPPRSPRRRSAPPAG 95
>LOC_Os10g02120:12010.t00107:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5879 Score = 32.7 bits (65), Expect = 9.5 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = +1 / +1 Query: 1078 FLVHLNIRFILPWCVHNLVVLR 1143 F+V LN+R IL W VH +V+LR Sbjct: 3130 FMVCLNVRKILIWFVHRVVMLR 3195
>LOC_Os08g41030:12008.t03833:unspliced-genomic ethylene-responsive transcription factor 3, putative, expressed| Length = 906 Score = 32.7 bits (65), Expect = 9.5 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +2 / -2 Query: 566 RPLPCRVRSLGRPQDNKKYIWWC 634 RPL C R G+PQ + +WWC Sbjct: 593 RPLRCPWRGGGQPQP*RPRLWWC 525
>LOC_Os08g10940:12008.t00976:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5520 Score = 32.7 bits (65), Expect = 9.5 Identities = 13/22 (59%), Positives = 18/22 (81%) Frame = +1 / +1 Query: 1078 FLVHLNIRFILPWCVHNLVVLR 1143 F+V LN+R IL W VH++V+LR Sbjct: 982 FVVCLNLRKILIWFVHHIVMLR 1047
>LOC_Os06g48530:12006.t04539:unspliced-genomic expressed protein| Length = 7044 Score = 32.7 bits (65), Expect = 9.5 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +1 / -1 Query: 1090 LNIRFILPWCVHNLVVLRR*ITCSPSLLGPCCIQLFS 1200 LN++++ P VH V+ ++ C PS PCC FS Sbjct: 1056 LNVKYL*PQGVH*QVLTKQGC*CLPSRTAPCCSLEFS 946
>LOC_Os06g34560:12006.t03152:unspliced-genomic RING-H2 finger protein ATL2G precursor, putative| Length = 1763 Score = 32.7 bits (65), Expect = 9.5 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = -3 / -3 Query: 651 RSPPRKHHQIYFLLSCGLPSERTRHGKGR 565 RSPP +HH F L G P R G GR Sbjct: 1572 RSPPSRHHPRSFQLHKGRPGGGPRRGAGR 1486
>LOC_Os06g32720:12006.t02969:unspliced-genomic zinc finger CCCH type domain-containing protein ZFN-like 3, putative,| expressed Length = 5040 Score = 32.7 bits (65), Expect = 9.5 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +3 / -1 Query: 288 LFHLHWFMMPTAN*YLLQRQSICF 359 ++H HW M+PT N + L +Q + F Sbjct: 2355 VYHRHWLMLPTQNMFELSQQIVVF 2284
>LOC_Os04g46450:12004.t04175:unspliced-genomic zinc finger, C3HC4 type family protein, expressed| Length = 8283 Score = 32.7 bits (65), Expect = 9.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -2 / +2 Query: 481 PFCSVRRQTSRKHGSFDRQTGTIYRM 404 PFCS +TS K G R T T+Y + Sbjct: 8084 PFCSFGEKTSNKRGGASRHTETLYHI 8161
>LOC_Os03g03164:12003.t00202:unspliced-genomic homeobox protein HD1, putative, expressed| Length = 5244 Score = 32.7 bits (65), Expect = 9.5 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = -1 / +2 Query: 152 GEANRPPQERQHRIRMAQRAPPKRRDNP*DLTIP 51 G+A+RPP + R QR PP R P L +P Sbjct: 422 GDAHRPPPADRRAARAVQRPPPLLRRAPPPLPLP 523
>LOC_Os01g47240:12001.t04172:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3237 Score = 32.7 bits (65), Expect = 9.5 Identities = 14/28 (50%), Positives = 15/28 (53%) Frame = -1 / -3 Query: 152 GEANRPPQERQHRIRMAQRAPPKRRDNP 69 GE RPP ER R+ R PPKR P Sbjct: 1606 GEPGRPPPERLPRLGGPGRPPPKRYHQP 1523
>LOC_Os01g45020:12001.t03961:unspliced-genomic F-box protein interaction domain containing protein, expressed| Length = 7145 Score = 32.7 bits (65), Expect = 9.5 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = -1 / -1 Query: 209 HHKQNVTKSLGLRDRRHVFGEANRPPQERQHRIRMAQRAPPKRR 78 HH+ N K + RH G RPP R + + A P RR Sbjct: 1928 HHRSNPMKHKIKKKNRHQMGGRRRPPGPRPLGVCASSAATPARR 1797 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 825,641,916 Number of extensions: 13337081 Number of successful extensions: 52927 Number of sequences better than 10.0: 47 Length of query: 673 Length of database: 55,613,886 Length adjustment: 52 Effective length of query: 621 Effective length of database: 52,687,430 Effective search space: 32718894030 Effective search space used: 32718894030 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
