| Clone Name | FLbaf162o11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC104285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0035J08, complete sequence Length = 117555 Score = 115 bits (58), Expect = 2e-22 Identities = 61/62 (98%) Strand = Plus / Minus Query: 175 tacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctcctcctc 234 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34659 tacctgttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctcctcctc 34600 Query: 235 cg 236 || Sbjct: 34599 cg 34598 Score = 67.9 bits (34), Expect = 5e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 166 gagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgc 225 |||||||||||||| |||||| || | ||||||||||||||| ||||||||||||| | Sbjct: 29281 gagtacgactacctgttcaaggtggttctcatcggcgactccggcgtcggcaagtccaac 29340 Query: 226 ctcctc 231 |||||| Sbjct: 29341 ctcctc 29346 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 345 tgcaggacgatgcgtacgtcgacacctacatcagcaccatcggagttgatttc 397 ||||||||||| ||||| ||||||| |||||||| |||||||| ||||||||| Sbjct: 34472 tgcaggacgattcgtacatcgacacttacatcagtaccatcggtgttgatttc 34420
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 115 bits (58), Expect = 2e-22 Identities = 61/62 (98%) Strand = Plus / Minus Query: 175 tacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctcctcctc 234 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259139 tacctgttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctcctcctc 259080 Query: 235 cg 236 || Sbjct: 259079 cg 259078 Score = 67.9 bits (34), Expect = 5e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 166 gagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgc 225 |||||||||||||| |||||| || | ||||||||||||||| ||||||||||||| | Sbjct: 253761 gagtacgactacctgttcaaggtggttctcatcggcgactccggcgtcggcaagtccaac 253820 Query: 226 ctcctc 231 |||||| Sbjct: 253821 ctcctc 253826 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 345 tgcaggacgatgcgtacgtcgacacctacatcagcaccatcggagttgatttc 397 ||||||||||| ||||| ||||||| |||||||| |||||||| ||||||||| Sbjct: 258952 tgcaggacgattcgtacatcgacacttacatcagtaccatcggtgttgatttc 258900 Score = 63.9 bits (32), Expect = 7e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctc 228 ||||||||||| |||||| || | ||||||||||||||| ||||||||||||| |||| Sbjct: 25426744 tacgactacctgttcaaggtggtgctcatcggcgactccggcgtcggcaagtccaacctc 25426685 Query: 229 ctcctccgcttc 240 ||| ||||||| Sbjct: 25426684 ctctcccgcttc 25426673 Score = 48.1 bits (24), Expect = 0.043 Identities = 30/32 (93%) Strand = Plus / Minus Query: 169 tacgactacctcttcaagctgctcctcatcgg 200 |||||||||||| ||||||| ||||||||||| Sbjct: 22506985 tacgactacctcatcaagctcctcctcatcgg 22506954 Score = 46.1 bits (23), Expect = 0.17 Identities = 35/39 (89%) Strand = Plus / Minus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcc 207 |||||||||||||||||| || | |||||||| |||||| Sbjct: 27874035 tacgactacctcttcaaggtggtgctcatcggggactcc 27873997
>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12, complete sequence Length = 160603 Score = 115 bits (58), Expect = 2e-22 Identities = 61/62 (98%) Strand = Plus / Minus Query: 175 tacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctcctcctc 234 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141323 tacctgttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctcctcctc 141264 Query: 235 cg 236 || Sbjct: 141263 cg 141262 Score = 67.9 bits (34), Expect = 5e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 166 gagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgc 225 |||||||||||||| |||||| || | ||||||||||||||| ||||||||||||| | Sbjct: 135945 gagtacgactacctgttcaaggtggttctcatcggcgactccggcgtcggcaagtccaac 136004 Query: 226 ctcctc 231 |||||| Sbjct: 136005 ctcctc 136010 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 345 tgcaggacgatgcgtacgtcgacacctacatcagcaccatcggagttgatttc 397 ||||||||||| ||||| ||||||| |||||||| |||||||| ||||||||| Sbjct: 141136 tgcaggacgattcgtacatcgacacttacatcagtaccatcggtgttgatttc 141084
>dbj|AK060839.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D03, full insert sequence Length = 1351 Score = 95.6 bits (48), Expect = 2e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 175 tacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctcctcctc 234 ||||| ||||||||||||||||||||||||||||| ||||||||||| ||| |||||||| Sbjct: 453 tacctgttcaagctgctcctcatcggcgactcctcggtcggcaagtcatgcttcctcctc 512 Query: 235 cgcttcgc 242 || ||||| Sbjct: 513 cgattcgc 520 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 359 tacgtcgacacctacatcagcaccatcggagttgatttcaa 399 |||||||||| |||||||||||| ||||| ||||| ||||| Sbjct: 531 tacgtcgacagctacatcagcacgatcggtgttgacttcaa 571
>gb|DQ246177.1| Zea mays clone 12478 mRNA sequence Length = 1091 Score = 91.7 bits (46), Expect = 3e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 165 cgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctg 224 ||||| ||| ||||| |||||||| ||||| |||||||||||||| || ||||||||||| Sbjct: 229 cgagttcgattacctgttcaagcttctcctgatcggcgactcctcggtgggcaagtcctg 288 Query: 225 cctcctcctccgcttcgc 242 | |||||||||||||||| Sbjct: 289 cttcctcctccgcttcgc 306 Score = 54.0 bits (27), Expect = 7e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 359 tacgtcgacacctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctc 418 ||||| |||| |||||||||||| ||||| || || || |||||||| || |||||| | Sbjct: 317 tacgtggacagctacatcagcacgatcggcgtcgactttaaaatccgcacggtcgaggtg 376 Query: 419 gacggcaagtcggtgaagctgcagatt 445 || |||||| | || |||||||||||| Sbjct: 377 gagggcaagaccgtaaagctgcagatt 403
>emb|X63277.1|ZMYPTM1 Z.mays yptm1 cDNA Length = 996 Score = 91.7 bits (46), Expect = 3e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 165 cgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctg 224 ||||| ||| ||||| |||||||| ||||| |||||||||||||| || ||||||||||| Sbjct: 201 cgagttcgattacctgttcaagcttctcctgatcggcgactcctcggtgggcaagtcctg 260 Query: 225 cctcctcctccgcttcgc 242 | |||||||||||||||| Sbjct: 261 cttcctcctccgcttcgc 278 Score = 54.0 bits (27), Expect = 7e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 359 tacgtcgacacctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctc 418 ||||| |||| |||||||||||| ||||| || || || |||||||| || |||||| | Sbjct: 289 tacgtggacagctacatcagcacgatcggcgtcgactttaaaatccgcacggtcgaggtg 348 Query: 419 gacggcaagtcggtgaagctgcagatt 445 || |||||| | || |||||||||||| Sbjct: 349 gagggcaagaccgtaaagctgcagatt 375
>gb|AY110905.1| Zea mays CL34283_1 mRNA sequence Length = 990 Score = 91.7 bits (46), Expect = 3e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 165 cgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaa 218 |||||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 82 cgagtacgactatctcttcaagctgctcctcatcggcgattcctccgtcggcaa 135
>gb|DQ245235.1| Zea mays clone 13952 mRNA sequence Length = 853 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcct 223 |||||| |||||||||||||||||| ||||| |||||||||||| |||||||||| | Sbjct: 82 ccgagttcgactacctcttcaagctactccttatcggcgactccggcgtcggcaagagca 141 Query: 224 gcctcctcctccgcttc 240 ||||||||||||||||| Sbjct: 142 gcctcctcctccgcttc 158
>gb|AY104355.1| Zea mays PCO115514 mRNA sequence Length = 1053 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcct 223 |||||| |||||||||||||||||| ||||| |||||||||||| |||||||||| | Sbjct: 197 ccgagttcgactacctcttcaagctactccttatcggcgactccggcgtcggcaagagca 256 Query: 224 gcctcctcctccgcttc 240 ||||||||||||||||| Sbjct: 257 gcctcctcctccgcttc 273
>gb|DQ246111.1| Zea mays clone 19359 mRNA sequence Length = 922 Score = 87.7 bits (44), Expect = 5e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcggcgactcc 207 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 ccgagtacgactacctcttcaagctgctcctcatcggcgactcc 168
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 166 gagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgc 225 |||||||||||||||||||||||||| || ||||||||| | ||||| ||||||||| Sbjct: 301874 gagtacgactacctcttcaagctgctgctgatcggcgacagcggtgtcggtaagtcctgc 301933 Query: 226 ctcctcctccgcttcgccg 244 || |||||||||||||||| Sbjct: 301934 ctgctcctccgcttcgccg 301952
>ref|XM_842937.1| Leishmania major strain Friedlin small GTP-binding protein Rab1 (LMJ_0333) partial mRNA Length = 603 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 166 gagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgc 225 |||||||||||||||||||||||||| || ||||||||| | ||||| ||||||||| Sbjct: 10 gagtacgactacctcttcaagctgctgctgatcggcgacagcggtgtcggtaagtcctgc 69 Query: 226 ctcctcctccgcttcgccg 244 || |||||||||||||||| Sbjct: 70 ctgctcctccgcttcgccg 88
>gb|L12031.1|LEIGTPHOM Leishmania major V121 GTP-binding protein homologue (YPT) gene, complete cds Length = 776 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 166 gagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgc 225 |||||||||||||||||||||||||| || ||||||||| | ||||| ||||||||| Sbjct: 84 gagtacgactacctcttcaagctgctgctgatcggcgacacgggtgtcggtaagtcctgc 143 Query: 226 ctcctcctccgcttcgccg 244 || |||||||||||||||| Sbjct: 144 ctgctcctccgcttcgccg 162
>ref|NM_001064372.1| Oryza sativa (japonica cultivar-group) Os06g0551400 (Os06g0551400) mRNA, complete cds Length = 1005 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctc 228 |||||||||||||||||| || ||||||||||||||||| ||||||||||||| |||| Sbjct: 120 tacgactacctcttcaaggtggtcctcatcggcgactccggcgtcggcaagtccaacctc 179 Query: 229 ctcctccgcttc 240 ||| ||||||| Sbjct: 180 ctctcccgcttc 191
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctc 228 |||||||||||||||||| || ||||||||||||||||| ||||||||||||| |||| Sbjct: 20553714 tacgactacctcttcaaggtggtcctcatcggcgactccggcgtcggcaagtccaacctc 20553655 Query: 229 ctcctccgcttc 240 ||| ||||||| Sbjct: 20553654 ctctcccgcttc 20553643
>gb|AF327517.1|AF327517 Oryza sativa GTP-binding protein mRNA, complete cds Length = 1406 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctc 228 |||||||||||||||||| || ||||||||||||||||| ||||||||||||| |||| Sbjct: 510 tacgactacctcttcaaggtggtcctcatcggcgactccggcgtcggcaagtccaacctc 569 Query: 229 ctcctccgcttc 240 ||| ||||||| Sbjct: 570 ctctcccgcttc 581
>dbj|D13758.1|RICSS230 Oryza sativa ss230 mRNA for ras-related GTP binding protein, complete cds Length = 946 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctc 228 |||||||||||||||||| || ||||||||||||||||| ||||||||||||| |||| Sbjct: 86 tacgactacctcttcaaggtggtcctcatcggcgactccggcgtcggcaagtccaacctc 145 Query: 229 ctcctccgcttc 240 ||| ||||||| Sbjct: 146 ctctcccgcttc 157
>dbj|AP003686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0659D09 Length = 168253 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctc 228 |||||||||||||||||| || ||||||||||||||||| ||||||||||||| |||| Sbjct: 126009 tacgactacctcttcaaggtggtcctcatcggcgactccggcgtcggcaagtccaacctc 125950 Query: 229 ctcctccgcttc 240 ||| ||||||| Sbjct: 125949 ctctcccgcttc 125938
>dbj|AK066548.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013069H14, full insert sequence Length = 1006 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctc 228 |||||||||||||||||| || ||||||||||||||||| ||||||||||||| |||| Sbjct: 121 tacgactacctcttcaaggtggtcctcatcggcgactccggcgtcggcaagtccaacctc 180 Query: 229 ctcctccgcttc 240 ||| ||||||| Sbjct: 181 ctctcccgcttc 192
>gb|AY104866.1| Zea mays PCO122462 mRNA sequence Length = 1057 Score = 79.8 bits (40), Expect = 1e-11 Identities = 43/44 (97%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcggcgactcc 207 ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 207 ccgagtacgactacctcttcaagctgctcctcatcggggactcc 250
>ref|XM_001225497.1| Chaetomium globosum CBS 148.51 GTP-binding protein ypt1 (CHGG_07842) mRNA, complete cds Length = 612 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 379 caccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtcggtgaagct 438 ||||||||| || || |||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 117 caccatcggtgtcgacttcaaaatccggacgatcgagctcgacggcaagacggtgaagct 176 Score = 65.9 bits (33), Expect = 2e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcct 223 |||| ||||| ||||||||||||||||| |||||||| ||||| ||||||||||| | Sbjct: 8 ccgaatacgattacctcttcaagctgctgctcatcggtgactcgggtgtcggcaagtctt 67 Query: 224 gcctcctcctccgcttcgccg 244 |||| ||||| || ||||||| Sbjct: 68 gcctgctcctgcggttcgccg 88
>emb|CR670292.2|CNS0FG62 Tetraodon nigroviridis full-length cDNA Length = 560 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 ||||||||||||||||||||| || ||||| ||||| ||||||||||| |||| |||| | Sbjct: 94 ctacatcagcaccatcggagtggacttcaagatccgcaccgtcgagctggacgccaagac 153 Query: 430 ggtgaagctgcagat 444 | ||||||||||| Sbjct: 154 catcaagctgcagat 168 Score = 44.1 bits (22), Expect = 0.66 Identities = 58/70 (82%) Strand = Plus / Plus Query: 175 tacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctcctcctc 234 |||||||||||||| ||||| ||||| ||||| || || ||||||||||| || || Sbjct: 5 tacctcttcaagctcctcctgatcggggactcgggagtggggaagtcctgcctgctgctg 64 Query: 235 cgcttcgccg 244 |||||||||| Sbjct: 65 cgcttcgccg 74
>gb|DQ245314.1| Zea mays clone 14393 mRNA sequence Length = 1143 Score = 67.9 bits (34), Expect = 5e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 165 cgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcc 222 |||||||||||||||||||||| | | ||||||||||||||| ||||||||||||| Sbjct: 133 cgagtacgactacctcttcaagatcgtgctcatcggcgactccggcgtcggcaagtcc 190
>emb|CT830167.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN013F09, full insert sequence Length = 1205 Score = 67.9 bits (34), Expect = 5e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 165 cgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcc 222 |||||||||||||||||||||| | | ||||||||||||||| ||||||||||||| Sbjct: 155 cgagtacgactacctcttcaagatcgtgctcatcggcgactccggcgtcggcaagtcc 212
>emb|CT829487.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA103P04, full insert sequence Length = 1032 Score = 67.9 bits (34), Expect = 5e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 175 tacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctcctcctc 234 |||||||| ||||||||||||||||||||||| |||||||||| | | ||||||||| Sbjct: 211 tacctctttaagctgctcctcatcggcgactcgggcgtcggcaagagcagtctcctcctc 270 Query: 235 cgcttc 240 |||||| Sbjct: 271 cgcttc 276
>ref|NM_001060943.1| Oryza sativa (japonica cultivar-group) Os05g0105100 (Os05g0105100) mRNA, complete cds Length = 873 Score = 67.9 bits (34), Expect = 5e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 166 gagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgc 225 |||||||||||||| |||||| || | ||||||||||||||| ||||||||||||| | Sbjct: 116 gagtacgactacctgttcaaggtggttctcatcggcgactccggcgtcggcaagtccaac 175 Query: 226 ctcctc 231 |||||| Sbjct: 176 ctcctc 181
>ref|NM_001058279.1| Oryza sativa (japonica cultivar-group) Os03g0823700 (Os03g0823700) mRNA, complete cds Length = 1217 Score = 67.9 bits (34), Expect = 5e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 165 cgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcc 222 |||||||||||||||||||||| | | ||||||||||||||| ||||||||||||| Sbjct: 155 cgagtacgactacctcttcaagatcgtgctcatcggcgactccggcgtcggcaagtcc 212
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 67.9 bits (34), Expect = 5e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 165 cgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcc 222 |||||||||||||||||||||| | | ||||||||||||||| ||||||||||||| Sbjct: 34382766 cgagtacgactacctcttcaagatcgtgctcatcggcgactccggcgtcggcaagtcc 34382709 Score = 42.1 bits (21), Expect = 2.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcggcgac 204 |||| ||||| || ||| |||||||||||||||| |||||| Sbjct: 34193979 ccgactacgattatctcatcaagctgctcctcattggcgac 34194019
>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete sequence Length = 143205 Score = 67.9 bits (34), Expect = 5e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 165 cgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcc 222 |||||||||||||||||||||| | | ||||||||||||||| ||||||||||||| Sbjct: 42704 cgagtacgactacctcttcaagatcgtgctcatcggcgactccggcgtcggcaagtcc 42761
>dbj|AK111647.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132F23, full insert sequence Length = 1059 Score = 67.9 bits (34), Expect = 5e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 175 tacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctcctcctc 234 |||||||| ||||||||||||||||||||||| |||||||||| | | ||||||||| Sbjct: 200 tacctctttaagctgctcctcatcggcgactcgggcgtcggcaagagcagtctcctcctc 259 Query: 235 cgcttc 240 |||||| Sbjct: 260 cgcttc 265
>gb|BT023992.1| Zea mays clone EL01N0409D10 mRNA sequence Length = 1150 Score = 67.9 bits (34), Expect = 5e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 165 cgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcc 222 |||||||||||||||||||||| | | ||||||||||||||| ||||||||||||| Sbjct: 145 cgagtacgactacctcttcaagatcgtgctcatcggcgactccggcgtcggcaagtcc 202
>dbj|AK104720.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-A11, full insert sequence Length = 1059 Score = 67.9 bits (34), Expect = 5e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 175 tacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctcctcctc 234 |||||||| ||||||||||||||||||||||| |||||||||| | | ||||||||| Sbjct: 199 tacctctttaagctgctcctcatcggcgactcgggcgtcggcaagagcagtctcctcctc 258 Query: 235 cgcttc 240 |||||| Sbjct: 259 cgcttc 264
>dbj|AK102713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033104P17, full insert sequence Length = 874 Score = 67.9 bits (34), Expect = 5e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 166 gagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgc 225 |||||||||||||| |||||| || | ||||||||||||||| ||||||||||||| | Sbjct: 117 gagtacgactacctgttcaaggtggttctcatcggcgactccggcgtcggcaagtccaac 176 Query: 226 ctcctc 231 |||||| Sbjct: 177 ctcctc 182
>dbj|AK067508.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110L21, full insert sequence Length = 3009 Score = 67.9 bits (34), Expect = 5e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 165 cgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcc 222 |||||||||||||||||||||| | | ||||||||||||||| ||||||||||||| Sbjct: 156 cgagtacgactacctcttcaagatcgtgctcatcggcgactccggcgtcggcaagtcc 213
>dbj|AK061336.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-B12, full insert sequence Length = 1217 Score = 67.9 bits (34), Expect = 5e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 165 cgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcc 222 |||||||||||||||||||||| | | ||||||||||||||| ||||||||||||| Sbjct: 155 cgagtacgactacctcttcaagatcgtgctcatcggcgactccggcgtcggcaagtcc 212
>gb|AY110333.1| Zea mays CL8515_1 mRNA sequence Length = 1118 Score = 67.9 bits (34), Expect = 5e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 165 cgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcc 222 |||||||||||||||||||||| | | ||||||||||||||| ||||||||||||| Sbjct: 980 cgagtacgactacctcttcaagatcgtgctcatcggcgactccggcgtcggcaagtcc 923
>gb|DQ245392.1| Zea mays clone 15038 mRNA sequence Length = 1037 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtc 221 |||||||||||||||||| || | ||||||||||||||| |||||||||||| Sbjct: 140 tacgactacctcttcaaggtggtgctcatcggcgactccggcgtcggcaagtc 192
>dbj|AB232601.1| Mus musculus mRNA for Rab8B, complete cds Length = 624 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 168 gtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcct 227 |||||| || || ||||||||||| ||||||||||||||| ||| |||||| ||||||| Sbjct: 12 gtacgattatctgttcaagctgctgctcatcggcgactccggcgttggcaagacctgcct 71 Query: 228 cctcctccgcttc 240 ||| |||||||| Sbjct: 72 cctgttccgcttc 84
>ref|XM_980344.1| PREDICTED: Mus musculus similar to RAB8B, member RAS oncogene family (LOC670268), mRNA Length = 3161 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 168 gtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcct 227 |||||| || || ||||||||||| ||||||||||||||| ||| |||||| ||||||| Sbjct: 84 gtacgattatctgttcaagctgctgctcatcggcgactccggcgttggcaagacctgcct 143 Query: 228 cctcctccgcttc 240 ||| |||||||| Sbjct: 144 cctgttccgcttc 156
>ref|NM_173413.2| Mus musculus RAB8B, member RAS oncogene family (Rab8b), mRNA gb|BC059208.1| Mus musculus RAB8B, member RAS oncogene family, mRNA (cDNA clone MGC:66509 IMAGE:6405462), complete cds Length = 4749 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 168 gtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcct 227 |||||| || || ||||||||||| ||||||||||||||| ||| |||||| ||||||| Sbjct: 66 gtacgattatctgttcaagctgctgctcatcggcgactccggcgttggcaagacctgcct 125 Query: 228 cctcctccgcttc 240 ||| |||||||| Sbjct: 126 cctgttccgcttc 138
>gb|AC166370.3| Mus musculus BAC clone RP23-20I24 from chromosome 9, complete sequence Length = 242229 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 168 gtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcct 227 |||||| || || ||||||||||| ||||||||||||||| ||| |||||| ||||||| Sbjct: 49751 gtacgattatctgttcaagctgctgctcatcggcgactccggcgttggcaagacctgcct 49692 Query: 228 cctcctccgcttc 240 ||| |||||||| Sbjct: 49691 cctgttccgcttc 49679
>dbj|AK155621.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730038O22 product:RAB8B, member RAS oncogene family, full insert sequence Length = 2921 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 168 gtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcct 227 |||||| || || ||||||||||| ||||||||||||||| ||| |||||| ||||||| Sbjct: 34 gtacgattatctgttcaagctgctgctcatcggcgactccggcgttggcaagacctgcct 93 Query: 228 cctcctccgcttc 240 ||| |||||||| Sbjct: 94 cctgttccgcttc 106
>dbj|AK084650.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330025I23 product:RAS-RELATED PROTEIN RAB-8B homolog [Rattus norvegicus], full insert sequence Length = 3517 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 168 gtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcct 227 |||||| || || ||||||||||| ||||||||||||||| ||| |||||| ||||||| Sbjct: 34 gtacgattatctgttcaagctgctgctcatcggcgactccggcgttggcaagacctgcct 93 Query: 228 cctcctccgcttc 240 ||| |||||||| Sbjct: 94 cctgttccgcttc 106
>dbj|AK051218.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130018D01 product:RAB8-LIKE (FRAGMENT) homolog [Caenorhabditis elegans], full insert sequence Length = 1981 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 168 gtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcct 227 |||||| || || ||||||||||| ||||||||||||||| ||| |||||| ||||||| Sbjct: 34 gtacgattatctgttcaagctgctgctcatcggcgactccggcgttggcaagacctgcct 93 Query: 228 cctcctccgcttc 240 ||| |||||||| Sbjct: 94 cctgttccgcttc 106
>gb|AC159741.2| Mus musculus BAC clone RP23-178B21 from chromosome 9, complete sequence Length = 185878 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 168 gtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcct 227 |||||| || || ||||||||||| ||||||||||||||| ||| |||||| ||||||| Sbjct: 138517 gtacgattatctgttcaagctgctgctcatcggcgactccggcgttggcaagacctgcct 138458 Query: 228 cctcctccgcttc 240 ||| |||||||| Sbjct: 138457 cctgttccgcttc 138445
>ref|NM_153317.1| Rattus norvegicus RAB8B, member RAS oncogene family (Rab8b), mRNA gb|U53475.1|RNU53475 Rattus norvegicus GTPase Rab8b (Rab8b) mRNA, complete cds Length = 740 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 168 gtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcct 227 |||||| || || ||||||||||| ||||||||||||||| ||| |||||| ||||||| Sbjct: 78 gtacgattatctgttcaagctgctgctcatcggcgactccggcgttggcaagacctgcct 137 Query: 228 cctcctccgcttc 240 ||| |||||||| Sbjct: 138 cctgttccgcttc 150
>gb|DQ245083.1| Zea mays clone 12828 mRNA sequence Length = 1032 Score = 63.9 bits (32), Expect = 7e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcggcga 203 |||| |||||||||||| |||||||||||||||||||||| Sbjct: 207 ccgactacgactacctcatcaagctgctcctcatcggcga 246
>ref|NM_001062583.1| Oryza sativa (japonica cultivar-group) Os05g0516800 (Os05g0516800) mRNA, complete cds Length = 968 Score = 63.9 bits (32), Expect = 7e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctc 228 ||||||||||| |||||| || | ||||||||||||||| ||||||||||||| |||| Sbjct: 92 tacgactacctgttcaaggtggtgctcatcggcgactccggcgtcggcaagtccaacctc 151 Query: 229 ctcctccgcttc 240 ||| ||||||| Sbjct: 152 ctctcccgcttc 163
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 63.9 bits (32), Expect = 7e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctc 228 ||||||||||| |||||| || | ||||||||||||||| ||||||||||||| |||| Sbjct: 67105 tacgactacctgttcaaggtggtgctcatcggcgactccggcgtcggcaagtccaacctc 67046 Query: 229 ctcctccgcttc 240 ||| ||||||| Sbjct: 67045 ctctcccgcttc 67034
>gb|AF454544.1| Pichia angusta strain DL-1 GTP-binding protein (YPT1) and phosphomannose isomerase (PMI40) genes, complete cds; and unknown genes Length = 6000 Score = 63.9 bits (32), Expect = 7e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 380 accatcggagttgatttcaaaatccggaccgtcgagctcgacggcaag 427 ||||||||||| |||||||| ||||||||| ||||||| ||||||||| Sbjct: 1487 accatcggagtggatttcaagatccggaccatcgagctagacggcaag 1440 Score = 63.9 bits (32), Expect = 7e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctg 224 ||||||||||| ||||||||||| || |||||||||||| ||| ||||||||||| Sbjct: 1592 tacgactaccttttcaagctgctgcttatcggcgactccggcgtgggcaagtcctg 1537
>dbj|AK031251.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930437D16 product:RAS-RELATED PROTEIN RAB-8B homolog [Rattus norvegicus], full insert sequence Length = 2590 Score = 63.9 bits (32), Expect = 7e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 181 ttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctcctcctccgcttc 240 ||||||||||| ||||||||||||||| ||| |||||| |||||||||| |||||||| Sbjct: 44 ttcaagctgctgctcatcggcgactccggcgttggcaagacctgcctcctgttccgcttc 103
>dbj|AK061969.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-H05, full insert sequence Length = 968 Score = 63.9 bits (32), Expect = 7e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctc 228 ||||||||||| |||||| || | ||||||||||||||| ||||||||||||| |||| Sbjct: 92 tacgactacctgttcaaggtggtgctcatcggcgactccggcgtcggcaagtccaacctc 151 Query: 229 ctcctccgcttc 240 ||| ||||||| Sbjct: 152 ctctcccgcttc 163
>dbj|AK060246.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-H10, full insert sequence Length = 1344 Score = 63.9 bits (32), Expect = 7e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctc 228 ||||||||||| |||||| || | ||||||||||||||| ||||||||||||| |||| Sbjct: 83 tacgactacctgttcaaggtggtgctcatcggcgactccggcgtcggcaagtccaacctc 142 Query: 229 ctcctccgcttc 240 ||| ||||||| Sbjct: 143 ctctcccgcttc 154
>gb|AF346820.1| Pichia angusta GTP-binding protein (YPT1) gene, complete cds Length = 1680 Score = 63.9 bits (32), Expect = 7e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctg 224 ||||||||||| ||||||||||| || |||||||||||| ||| ||||||||||| Sbjct: 625 tacgactaccttttcaagctgctgcttatcggcgactccggcgtgggcaagtcctg 680 Score = 63.9 bits (32), Expect = 7e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 380 accatcggagttgatttcaaaatccggaccgtcgagctcgacggcaag 427 ||||||||||| |||||||| ||||||||| ||||||| ||||||||| Sbjct: 730 accatcggagtggatttcaagatccggaccatcgagctagacggcaag 777
>ref|XR_023776.1| PREDICTED: Pan troglodytes hypothetical LOC452300 (LOC452300), mRNA Length = 997 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 356 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 415 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 416 ggtgaagctgcagat 430 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 261 tacgaccacctcttcaagctgctcatcatcggcgac 296
>gb|DQ893750.1| Homo sapiens clone FLH164198.01L; RZPDo839D10161D RAB35 mRNA, partial sequence Length = 606 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 108 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 167 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 168 ggtgaagctgcagat 182 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 13 tacgaccacctcttcaagctgctcatcatcggcgac 48
>gb|DQ890603.1| Synthetic construct Homo sapiens clone FLH165417.01X; RZPDo839C01160D RAB35 mRNA, complete sequence Length = 606 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 108 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 167 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 168 ggtgaagctgcagat 182 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 13 tacgaccacctcttcaagctgctcatcatcggcgac 48
>gb|DQ890586.1| Synthetic construct Homo sapiens clone FLH164202.01X; RZPDo839D10162D RAB35 mRNA, complete sequence Length = 606 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 108 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 167 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 168 ggtgaagctgcagat 182 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 13 tacgaccacctcttcaagctgctcatcatcggcgac 48
>gb|BT020024.1| Homo sapiens RAB35, member RAS oncogene family mRNA, complete cds Length = 606 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 108 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 167 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 168 ggtgaagctgcagat 182 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 13 tacgaccacctcttcaagctgctcatcatcggcgac 48
>gb|BT020023.1| Synthetic construct Homo sapiens RAB35, member RAS oncogene family mRNA, partial cds Length = 606 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 108 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 167 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 168 ggtgaagctgcagat 182 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 13 tacgaccacctcttcaagctgctcatcatcggcgac 48
>gb|BT020020.1| Synthetic construct Homo sapiens RAB35, member RAS oncogene family mRNA, partial cds Length = 606 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 108 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 167 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 168 ggtgaagctgcagat 182 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 13 tacgaccacctcttcaagctgctcatcatcggcgac 48
>gb|BC015931.2| Homo sapiens RAB35, member RAS oncogene family, mRNA (cDNA clone MGC:8924 IMAGE:3907209), complete cds Length = 2875 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 212 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 271 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 272 ggtgaagctgcagat 286 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 117 tacgaccacctcttcaagctgctcatcatcggcgac 152
>ref|NM_006861.4| Homo sapiens RAB35, member RAS oncogene family (RAB35), mRNA Length = 2931 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 253 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 312 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 313 ggtgaagctgcagat 327 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 158 tacgaccacctcttcaagctgctcatcatcggcgac 193
>dbj|AK125543.1| Homo sapiens cDNA FLJ43555 fis, clone PROST2018437, highly similar to Homo sapiens RAB35, member RAS oncogene family (RAB35) Length = 2449 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 1072 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 1131 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 1132 ggtgaagctgcagat 1146 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 865 tacgaccacctcttcaagctgctcatcatcggcgac 900
>gb|AF498960.1| Homo sapiens small GTP binding protein RAB35 (RAB35) mRNA, complete cds Length = 606 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 108 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 167 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 168 ggtgaagctgcagat 182 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 13 tacgaccacctcttcaagctgctcatcatcggcgac 48
>gb|S51252.1| Neurospora crassa NCYPT1 (Ncypt1) gene, complete cds Length = 3157 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcc 207 |||||||||||||||||||| ||||||||||| |||||| Sbjct: 1321 tacgactacctcttcaagctcctcctcatcggtgactcc 1359
>dbj|D17779.1|RICSS23015 Oryza sativa SS230 mRNA for ras-related GTP-binding protein, partial sequence Length = 312 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcc 207 |||||||||||||||||| || ||||||||||||||||| Sbjct: 86 tacgactacctcttcaaggtggtcctcatcggcgactcc 124
>emb|X79781.1|HSRAY1 H.sapiens ray mRNA Length = 730 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 189 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 248 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 249 ggtgaagctgcagat 263 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 94 tacgaccacctcttcaagctgctcatcatcggcgac 129
>emb|AL356324.1|NCB9J10 Neurospora crassa DNA linkage group II BAC clone B9J10 Length = 66924 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcc 207 |||||||||||||||||||| ||||||||||| |||||| Sbjct: 46429 tacgactacctcttcaagctcctcctcatcggtgactcc 46467
>emb|AJ277108.1|TRE277108 Trichoderma reesei ypt1 gene for small GTP-binding protein YPTI, exons 1-5 Length = 2351 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcc 207 |||||||||||||||||||| ||||||||||| |||||| Sbjct: 953 tacgactacctcttcaagctcctcctcatcggtgactcc 991 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 413 gagctcgacggcaagtcggtgaagctgcagattgtgagttc 453 ||||||||||||||| | ||||||||||||||||| ||||| Sbjct: 1146 gagctcgacggcaagactgtgaagctgcagattgtaagttc 1186
>ref|XM_958053.1| Neurospora crassa OR74A GTP-BINDING PROTEIN YPT1 (NCU08477.1) partial mRNA Length = 732 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcc 207 |||||||||||||||||||| ||||||||||| |||||| Sbjct: 133 tacgactacctcttcaagctcctcctcatcggtgactcc 171
>emb|CR541683.1| Homo sapiens full open reading frame cDNA clone RZPDo834D0628D for gene RAB35, RAB35, member RAS oncogene family; complete cds, without stopcodon Length = 603 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 108 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 167 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 168 ggtgaagctgcagat 182 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 13 tacgaccacctcttcaagctgctcatcatcggcgac 48
>emb|CR536486.1| Homo sapiens full open reading frame cDNA clone RZPDo834G0817D for gene RAB35, RAB35, member RAS oncogene family; complete cds, incl. stopcodon Length = 606 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 108 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 167 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 168 ggtgaagctgcagat 182 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 13 tacgaccacctcttcaagctgctcatcatcggcgac 48
>gb|AY891619.1| Synthetic construct Homo sapiens clone FLH016902.01L RAB35 member RAS oncogene family (RAB35) mRNA, partial cds Length = 606 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 108 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 167 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 168 ggtgaagctgcagat 182 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 13 tacgaccacctcttcaagctgctcatcatcggcgac 48
>gb|AY889038.1| Synthetic construct Homo sapiens clone FLH016904.01X RAB35 member RAS oncogene family (RAB35) mRNA, complete cds Length = 606 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 108 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 167 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 168 ggtgaagctgcagat 182 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 13 tacgaccacctcttcaagctgctcatcatcggcgac 48
>gb|AY890371.1| Synthetic construct Homo sapiens clone FLH018674.01X RAB35 member RAS oncogene family (RAB35) mRNA, complete cds Length = 606 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 108 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 167 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 168 ggtgaagctgcagat 182 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 13 tacgaccacctcttcaagctgctcatcatcggcgac 48
>gb|AY888268.1| Synthetic construct Homo sapiens clone FLH021046.01X RAB35 member RAS oncogene family (RAB35) mRNA, complete cds Length = 606 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 108 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 167 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 168 ggtgaagctgcagat 182 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 13 tacgaccacctcttcaagctgctcatcatcggcgac 48
>gb|AY890856.1| Synthetic construct Homo sapiens clone FLH021043.01L RAB35 member RAS oncogene family (RAB35) mRNA, partial cds Length = 606 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 108 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 167 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 168 ggtgaagctgcagat 182 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 13 tacgaccacctcttcaagctgctcatcatcggcgac 48
>gb|AY890855.1| Synthetic construct Homo sapiens clone FLH021042.01L RAB35 member RAS oncogene family (RAB35) mRNA, partial cds Length = 606 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 108 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 167 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 168 ggtgaagctgcagat 182 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 13 tacgaccacctcttcaagctgctcatcatcggcgac 48
>gb|AY893877.1| Synthetic construct Homo sapiens clone FLH127896.01L RAB35 member RAS oncogene family (RAB35) mRNA, partial cds Length = 606 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 108 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 167 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 168 ggtgaagctgcagat 182 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 13 tacgaccacctcttcaagctgctcatcatcggcgac 48
>gb|AY893660.1| Synthetic construct Homo sapiens clone FLH131037.01L RAB35 member RAS oncogene family (RAB35) mRNA, partial cds Length = 606 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 108 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 167 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 168 ggtgaagctgcagat 182 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 13 tacgaccacctcttcaagctgctcatcatcggcgac 48
>gb|AY893429.1| Synthetic construct Homo sapiens clone FLH127816.01X RAB35 member RAS oncogene family (RAB35) mRNA, complete cds Length = 606 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 108 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 167 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 168 ggtgaagctgcagat 182 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 13 tacgaccacctcttcaagctgctcatcatcggcgac 48
>gb|AC171012.3| Gallus gallus BAC clone CH261-128I7 from chromosome ul, complete sequence Length = 231142 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 194 tcatcggcgactcctccgtcggcaagtcctgcctcctcctccgcttc 240 |||||||||||||| |||| ||||||||||||||| ||| ||||||| Sbjct: 143914 tcatcggcgactccaccgtgggcaagtcctgcctcatccgccgcttc 143868
>gb|DQ218231.1| Gibberella moniliformis putative GTP-binding protein-like mRNA, partial sequence Length = 462 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcc 207 |||||||||||||||||||| ||||||||||| |||||| Sbjct: 273 tacgactacctcttcaagctcctcctcatcggagactcc 311
>gb|AC004812.1|AC004812 Homo sapiens PAC clone 267D11 from 12, complete sequence Length = 138532 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || |||| || Sbjct: 49997 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaacggggagaa 49938 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 49937 ggtgaagctgcagat 49923 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 62690 tacgaccacctcttcaagctgctcatcatcggcgac 62655
>gb|L14929.1|SOYRAB1P Glycine max (Rab1p) mRNA, complete cds Length = 828 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 359 tacgtcgacacctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagct 417 |||||||||| |||||| || ||||| |||||||||||||||||| | ||||| ||||| Sbjct: 131 tacgtcgacagctacataagtaccattggagttgatttcaaaatcagaaccgtggagct 189 Score = 42.1 bits (21), Expect = 2.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 181 ttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgc 225 |||||||| ||||| ||||||||||| ||||| || || |||||| Sbjct: 59 ttcaagcttctcctaatcggcgactcttccgttggaaaatcctgc 103
>gb|DQ245244.1| Zea mays clone 14005 mRNA sequence Length = 880 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcc 222 ||||| |||||||||||| || |||| |||||||||||| ||||||||||||| Sbjct: 99 tacgattacctcttcaaggtggtcctgatcggcgactccggcgtcggcaagtcc 152
>ref|NM_001051340.1| Oryza sativa (japonica cultivar-group) Os01g0848700 (Os01g0848700) mRNA, complete cds Length = 1130 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 165 cgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcc 222 ||||||||||||||| |||||| | ||||||||||||| ||| ||||||||||||| Sbjct: 202 cgagtacgactacctgttcaagatcgtcctcatcggcgattccggcgtcggcaagtcc 259
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 165 cgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcc 222 ||||||||||||||| |||||| | ||||||||||||| ||| ||||||||||||| Sbjct: 36463499 cgagtacgactacctgttcaagatcgtcctcatcggcgattccggcgtcggcaagtcc 36463442 Score = 48.1 bits (24), Expect = 0.043 Identities = 48/56 (85%) Strand = Plus / Minus Query: 172 gactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcct 227 ||||||||||||||||| || |||||||| ||||| |||||| ||||| ||||| Sbjct: 21141878 gactacctcttcaagcttctgctcatcggagactcgggcgtcgggaagtcttgcct 21141823 Score = 44.1 bits (22), Expect = 0.66 Identities = 46/54 (85%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcc 222 ||||||||||| |||||| | | ||||||||||||||| ||| ||||||||| Sbjct: 31397209 tacgactacctgttcaagacggtgctcatcggcgactccggcgtgggcaagtcc 31397262
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0005H10 Length = 142885 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 165 cgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcc 222 ||||||||||||||| |||||| | ||||||||||||| ||| ||||||||||||| Sbjct: 115338 cgagtacgactacctgttcaagatcgtcctcatcggcgattccggcgtcggcaagtcc 115281
>dbj|AK071303.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087L18, full insert sequence Length = 1131 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 165 cgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcc 222 ||||||||||||||| |||||| | ||||||||||||| ||| ||||||||||||| Sbjct: 203 cgagtacgactacctgttcaagatcgtcctcatcggcgattccggcgtcggcaagtcc 260
>gb|AY103999.1| Zea mays PCO068021 mRNA sequence Length = 903 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcc 222 ||||| |||||||||||| || |||| |||||||||||| ||||||||||||| Sbjct: 99 tacgattacctcttcaaggtggtcctgatcggcgactccggcgtcggcaagtcc 152
>emb|CT834571.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA119K13, full insert sequence Length = 1092 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcggcgac 204 |||| ||||| |||||| ||||||||||||||||||||||| Sbjct: 126 ccgactacgattacctcatcaagctgctcctcatcggcgac 166
>ref|NM_001065794.1| Oryza sativa (japonica cultivar-group) Os07g0239400 (Os07g0239400) mRNA, complete cds Length = 1326 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcggcgac 204 |||| ||||| |||||| ||||||||||||||||||||||| Sbjct: 296 ccgactacgattacctcatcaagctgctcctcatcggcgac 336
>emb|X97853.1|LJRAB1A L.japonicus mRNA for small GTP-binding protein, RAB1A Length = 905 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 362 gtcgacacctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctc 418 ||||||| |||||| |||||||| || ||||||||||||||| | || ||||||||| Sbjct: 228 gtcgacagctacattagcaccattggcgttgatttcaaaatcagaactgtcgagctc 284
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcggcgac 204 |||| ||||| |||||| ||||||||||||||||||||||| Sbjct: 7778619 ccgactacgattacctcatcaagctgctcctcatcggcgac 7778579 Score = 44.1 bits (22), Expect = 0.66 Identities = 31/34 (91%) Strand = Plus / Minus Query: 171 cgactacctcttcaagctgctcctcatcggcgac 204 |||| ||||| ||||||| ||||||||||||||| Sbjct: 5180686 cgaccacctcatcaagctcctcctcatcggcgac 5180653
>dbj|AP004340.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0523A04 Length = 149049 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcggcgac 204 |||| ||||| |||||| ||||||||||||||||||||||| Sbjct: 27617 ccgactacgattacctcatcaagctgctcctcatcggcgac 27577
>dbj|AP005194.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0565A07 Length = 152191 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcggcgac 204 |||| ||||| |||||| ||||||||||||||||||||||| Sbjct: 122708 ccgactacgattacctcatcaagctgctcctcatcggcgac 122668
>dbj|AK068609.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156E05, full insert sequence Length = 1327 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcggcgac 204 |||| ||||| |||||| ||||||||||||||||||||||| Sbjct: 297 ccgactacgattacctcatcaagctgctcctcatcggcgac 337
>emb|CT836583.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA116P20, full insert sequence Length = 882 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcct 223 ||||||| ||||||||||||||||| || |||||||| ||||| |||||| ||||| | Sbjct: 141 ccgagtatgactacctcttcaagcttctgctcatcggagactcgggcgtcgggaagtctt 200 Query: 224 gcct 227 |||| Sbjct: 201 gcct 204
>emb|CT836558.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA009C03, full insert sequence Length = 444 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcct 223 ||||||| ||||||||||||||||| || |||||||| ||||| |||||| ||||| | Sbjct: 119 ccgagtatgactacctcttcaagcttctgctcatcggagactcgggcgtcgggaagtctt 178 Query: 224 gcct 227 |||| Sbjct: 179 gcct 182
>dbj|AK243597.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100084E08, full insert sequence Length = 917 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcct 223 ||||||| ||||||||||||||||| || |||||||| ||||| |||||| ||||| | Sbjct: 118 ccgagtatgactacctcttcaagcttctgctcatcggagactcgggcgtcgggaagtctt 177 Query: 224 gcct 227 |||| Sbjct: 178 gcct 181
>dbj|AK237448.1| Sus scrofa mRNA, clone:SPL010046A07, expressed in spleen Length = 1607 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 129 tacgaccacctcttcaagctgctcatcatcggcgac 164
>ref|NM_001049871.1| Oryza sativa (japonica cultivar-group) Os01g0558600 (Os01g0558600) mRNA, complete cds Length = 947 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcct 223 ||||||| ||||||||||||||||| || |||||||| ||||| |||||| ||||| | Sbjct: 111 ccgagtatgactacctcttcaagcttctgctcatcggagactcgggcgtcgggaagtctt 170 Query: 224 gcct 227 |||| Sbjct: 171 gcct 174
>gb|BT028166.1| Gasterosteus aculeatus clone CNB146-B10 mRNA sequence Length = 957 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcgg 200 |||||||||||||||||||||||| ||||||| Sbjct: 212 tacgactacctcttcaagctgctcatcatcgg 243
>dbj|AB232631.1| Mus musculus mRNA for Rab35, complete cds Length = 606 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 13 tacgaccacctcttcaagctgctcatcatcggcgac 48 Score = 46.1 bits (23), Expect = 0.17 Identities = 62/75 (82%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| || ||||| || ||| || |||| || Sbjct: 108 ctacatcaccacaatcggagtggatttcaagattcggactgtggagatcaacggggagaa 167 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 168 ggtgaagctgcagat 182
>ref|XR_010444.1| PREDICTED: Macaca mulatta hypothetical protein LOC698400 (LOC698400), mRNA Length = 3733 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 987 tacgaccacctcttcaagctgctcatcatcggcgac 1022 Score = 54.0 bits (27), Expect = 7e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| ||||||||||| ||| || | || || Sbjct: 1082 ctacatcaccacgatcggagtggatttcaagatccggaccgtggagatcaatggagagaa 1141 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 1142 ggtgaagctgcagat 1156
>emb|CT981719.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 881 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 171 cgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcc 222 ||||||| |||||||| || |||| ||||| |||||| |||||||||||||| Sbjct: 150 cgactacgtcttcaaggtggtcctgatcggggactccgccgtcggcaagtcc 201
>gb|DQ222936.1| Chlamydomonas incerta YptC1 (yptC1) mRNA, complete cds Length = 681 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcggcgactcc 207 |||||||||||||||| |||||||| || ||||| ||||||||| Sbjct: 48 ccgagtacgactacctgttcaagcttctgctcattggcgactcc 91 Score = 54.0 bits (27), Expect = 7e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 374 atcagcaccatcggagttgatttcaaaatccggaccgtcgagctcga 420 |||||||||||||| || || ||||||||||| ||||| |||||||| Sbjct: 152 atcagcaccatcggcgtagacttcaaaatccgcaccgtggagctcga 198
>gb|AC139562.8| Mus musculus chromosome 5, clone RP24-180G11, complete sequence Length = 168158 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 32310 tacgaccacctcttcaagctgctcatcatcggcgac 32345 Score = 46.1 bits (23), Expect = 0.17 Identities = 62/75 (82%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| || ||||| || ||| || |||| || Sbjct: 40235 ctacatcaccacaatcggagtggatttcaagattcggactgtggagatcaacggggagaa 40294 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 40295 ggtgaagctgcagat 40309
>ref|NM_198163.1| Mus musculus RAB35, member RAS oncogene family (Rab35), mRNA gb|BC056466.1| Mus musculus RAB35, member RAS oncogene family, mRNA (cDNA clone MGC:67236 IMAGE:5717246), complete cds Length = 2181 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 173 tacgaccacctcttcaagctgctcatcatcggcgac 208 Score = 46.1 bits (23), Expect = 0.17 Identities = 62/75 (82%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| || ||||| || ||| || |||| || Sbjct: 268 ctacatcaccacaatcggagtggatttcaagattcggactgtggagatcaacggggagaa 327 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 328 ggtgaagctgcagat 342
>ref|XM_414313.1| PREDICTED: Gallus gallus similar to Ras-related protein RAB43 (LOC415970), mRNA Length = 667 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctc 228 ||||||| ||||||||||||| |||||||||| ||| || ||| |||||| |||||||| Sbjct: 49 tacgacttcctcttcaagctggtcctcatcggggacgccagcgtgggcaagacctgcctc 108
>ref|XM_849147.1| PREDICTED: Canis familiaris similar to RAB35, member RAS oncogene family (predicted) (LOC611477), mRNA Length = 1119 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 499 tacgaccacctcttcaagctgctcatcatcggcgac 534
>gb|AC159539.6| Mus musculus chromosome 5, clone RP23-228F6, complete sequence Length = 238599 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 195871 tacgaccacctcttcaagctgctcatcatcggcgac 195906 Score = 46.1 bits (23), Expect = 0.17 Identities = 62/75 (82%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| || ||||| || ||| || |||| || Sbjct: 203796 ctacatcaccacaatcggagtggatttcaagattcggactgtggagatcaacggggagaa 203855 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 203856 ggtgaagctgcagat 203870
>dbj|AK156576.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830031E13 product:Ras-related protein Rab-35 (Rab-1C) (GTP-binding protein RAY) homolog [Homo sapiens], full insert sequence Length = 2153 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 164 tacgaccacctcttcaagctgctcatcatcggcgac 199 Score = 46.1 bits (23), Expect = 0.17 Identities = 62/75 (82%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| || ||||| || ||| || |||| || Sbjct: 259 ctacatcaccacaatcggagtggatttcaagattcggactgtggagatcaacggggagaa 318 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 319 ggtgaagctgcagat 333
>gb|S66160.1| ric1=ras-related GTP binding protein possessing GTPase activity [Oryza sativa=rice, Yamahoushi, callus, mRNA, 955 nt] Length = 955 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcct 223 ||||||| ||||||||||||||||| || |||||||| ||||| |||||| ||||| | Sbjct: 111 ccgagtatgactacctcttcaagcttctgctcatcggagactcgggcgtcgggaagtctt 170 Query: 224 gcct 227 |||| Sbjct: 171 gcct 174
>ref|NM_001030669.1| Gallus gallus RAB35, member RAS oncogene family (RAB35), mRNA emb|AJ851375.1| Gallus gallus mRNA for hypothetical protein, clone 1b12 Length = 3203 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 104 tacgaccacctcttcaagctgctcatcatcggcgac 139
>ref|NM_001013046.1| Rattus norvegicus RAB35, member RAS oncogene family (Rab35), mRNA gb|BC085769.1| Rattus norvegicus RAB35, member RAS oncogene family, mRNA (cDNA clone MGC:93682 IMAGE:7135343), complete cds Length = 2151 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgac 204 |||||| ||||||||||||||||| ||||||||||| Sbjct: 117 tacgaccacctcttcaagctgctcatcatcggcgac 152 Score = 54.0 bits (27), Expect = 7e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||| ||| |||||||| |||||||| |||||||| || ||| || |||| || Sbjct: 212 ctacatcaccacaatcggagtggatttcaagatccggactgtggagatcaacggggagaa 271 Query: 430 ggtgaagctgcagat 444 ||||||||||||||| Sbjct: 272 ggtgaagctgcagat 286
>gb|BC060015.1| Xenopus laevis hypothetical protein MGC68629, mRNA (cDNA clone MGC:68629 IMAGE:4032253), complete cds Length = 1356 Score = 54.0 bits (27), Expect = 7e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 178 ctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctcctcctccgc 237 |||||||||||||| || |||||||||||| ||||||||| ||||| | ||| ||||| Sbjct: 241 ctcttcaagctgctgctgatcggcgactccggggtcggcaagacctgcgtgctcttccgc 300 Query: 238 ttc 240 ||| Sbjct: 301 ttc 303
>gb|AF532625.1| Glycine max GTP-binding protein mRNA, complete cds Length = 949 Score = 54.0 bits (27), Expect = 7e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctc 228 |||||||||||||||||| || |||| |||||||| ||| ||| ||||||||| |||| Sbjct: 116 tacgactacctcttcaaggtggtcctgatcggcgattccggcgtgggcaagtccaacctc 175 Query: 229 ctc 231 ||| Sbjct: 176 ctc 178
>ref|NM_001031504.1| Gallus gallus RAB8A, member RAS oncogene family (RAB8A), mRNA emb|AJ851430.1| Gallus gallus mRNA for hypothetical protein, clone 2k8 Length = 5888 Score = 54.0 bits (27), Expect = 7e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 168 gtacgactacctcttcaagctgctcctcatcggcgactc 206 ||||||||| || ||||||||||| |||||||||||||| Sbjct: 1334 gtacgactatctgttcaagctgctgctcatcggcgactc 1372
>dbj|D10435.1|RIC241 Oryza sativa mRNA for ras-related Hrab1B protein (241 gene), partial sequence Length = 255 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcggcgactc 206 ||||||| ||||||||||||||||| || |||||||| ||||| Sbjct: 112 ccgagtatgactacctcttcaagcttctgctcatcggagactc 154
>emb|BX930100.2| Gallus gallus finished cDNA, clone ChEST1021d13 Length = 1018 Score = 54.0 bits (27), Expect = 7e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 168 gtacgactacctcttcaagctgctcctcatcggcgactc 206 ||||||||| || ||||||||||| |||||||||||||| Sbjct: 18 gtacgactatctgttcaagctgctgctcatcggcgactc 56
>emb|BX932054.1| Gallus gallus finished cDNA, clone ChEST417i18 Length = 928 Score = 54.0 bits (27), Expect = 7e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 168 gtacgactacctcttcaagctgctcctcatcggcgactc 206 ||||||||| || ||||||||||| |||||||||||||| Sbjct: 394 gtacgactatctgttcaagctgctgctcatcggcgactc 356
>emb|BX931166.1| Gallus gallus finished cDNA, clone ChEST1022e3 Length = 983 Score = 54.0 bits (27), Expect = 7e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 168 gtacgactacctcttcaagctgctcctcatcggcgactc 206 ||||||||| || ||||||||||| |||||||||||||| Sbjct: 19 gtacgactatctgttcaagctgctgctcatcggcgactc 57
>dbj|D12550.1|PEAGTPBP11 Pisum sativum mRNA for GTP-binding protein, complete cds, clone:pra9C Length = 811 Score = 54.0 bits (27), Expect = 7e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagc 416 |||||| |||||||| ||||||||||| |||||||| ||||| |||| Sbjct: 168 ctacataagcaccattggagttgattttaaaatccgtaccgttgagc 214
>gb|AY109984.1| Zea mays CL2070_1 mRNA sequence Length = 994 Score = 54.0 bits (27), Expect = 7e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 359 tacgtcgacacctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctc 418 ||||| |||| |||||||||||| ||||| || || || |||||||| || |||||| | Sbjct: 289 tacgtggacagctacatcagcacgatcggcgtcgactttaaaatccgcacggtcgaggtg 348 Query: 419 gacggcaagtcggtgaagctgcagatt 445 || |||||| | || |||||||||||| Sbjct: 349 gagggcaagaccgtaaagctgcagatt 375 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Plus Query: 165 cgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaa 218 ||||| ||| ||||| |||||||| ||||| |||||||||||||| || ||||| Sbjct: 201 cgagttcgattacctgttcaagcttctcctgatcggcgactcctcggtgggcaa 254
>gb|DQ246087.1| Zea mays clone 15072 mRNA sequence Length = 1066 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcc 222 ||||||||||| |||||| || | |||||||| |||||| ||||||||||||| Sbjct: 196 tacgactacctattcaaggtggtgctcatcggggactccggcgtcggcaagtcc 249
>gb|AY690483.1| Triticum aestivum rab GTP-binding protein mRNA, complete cds Length = 1280 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactc 206 |||||||||||||||||| || | |||||||||||||| Sbjct: 270 tacgactacctcttcaaggtggtgctcatcggcgactc 307
>ref|XM_502561.1| Yarrowia lipolytica CLIB122, YALI0D08162g predicted mRNA Length = 609 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcat 197 |||| ||||||||||||||||||||||| ||||| Sbjct: 8 ccgaatacgactacctcttcaagctgcttctcat 41
>gb|AC124502.4| Mus musculus BAC clone RP23-414G6 from chromosome 19, complete sequence Length = 219212 Score = 52.0 bits (26), Expect = 0.003 Identities = 68/82 (82%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaagtc 429 |||||||||||||||||| || |||||||| || || ||| | ||||| |||||||| | Sbjct: 18680 ctacatcagcaccatcggtgtggatttcaagattcgaaccattgagctggacggcaaaac 18739 Query: 430 ggtgaagctgcagattgtgagt 451 | || ||||||||||||||| Sbjct: 18740 catcaaactgcagattgtgagt 18761
>gb|AY232027.1| Drosophila yakuba clone yak-ad_Rab1 mRNA sequence Length = 369 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Plus Query: 374 atcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacgg 423 |||||||| || ||||| |||||||||||| ||||| |||| |||||||| Sbjct: 121 atcagcacaattggagtggatttcaaaatcaggaccatcgaactcgacgg 170
>gb|AY231907.1| Drosophila yakuba clone yak-em_Rab1 mRNA sequence Length = 357 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Plus Query: 374 atcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacgg 423 |||||||| || ||||| |||||||||||| ||||| |||| |||||||| Sbjct: 121 atcagcacaattggagtggatttcaaaatcaggaccatcgaactcgacgg 170
>emb|AJ234567.1|HVU234567 Hordeum vulgare genomic DNA fragment; clone MWG0812 Length = 1096 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcc 222 |||||||||||||||||| | | |||||||||||||| ||||||||||||| Sbjct: 274 tacgactacctcttcaaggcggtgatcatcggcgactccggcgtcggcaagtcc 327
>gb|AY104765.1| Zea mays PCO111506 mRNA sequence Length = 621 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Plus Query: 172 gactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtc 221 |||||| |||||||| || | ||||||||||||||| | ||||||||||| Sbjct: 133 gactacgtcttcaaggtggtgctcatcggcgactccgctgtcggcaagtc 182
>gb|AC192582.2| Pan troglodytes BAC clone CH251-599G11 from chromosome 11, complete sequence Length = 219063 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Minus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 183572 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctggatggcaa 183516
>emb|AM393195.1| Synthetic construct Homo sapiens mRNA for hypothetical protein (RAB1B gene), clone DKFZp564I172.1E2 Length = 645 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 128 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctggatggcaa 184
>ref|NM_030981.2| Homo sapiens RAB1B, member RAS oncogene family (RAB1B), mRNA Length = 1955 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 203 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctggatggcaa 259
>ref|XM_001150399.1| PREDICTED: Pan troglodytes similar to RAB1B, member RAS oncogene family (LOC745036), mRNA Length = 2018 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 270 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctggatggcaa 326
>ref|XM_940462.2| PREDICTED: Homo sapiens similar to RAB1, member RAS oncogene family (LOC651324), mRNA Length = 333 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 147 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctggatggcaa 203
>dbj|AB232584.1| Mus musculus mRNA for Rab1B, complete cds Length = 606 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || |||||||| || || ||| | ||||| |||||||| Sbjct: 108 ctacatcagcaccatcggtgtggatttcaagattcgaaccattgagctggacggcaa 164
>ref|XM_001103335.1| PREDICTED: Macaca mulatta similar to rab-related GTP-binding protein (LOC707451), mRNA Length = 1823 Score = 50.1 bits (25), Expect = 0.011 Identities = 40/45 (88%) Strand = Plus / Plus Query: 196 atcggcgactcctccgtcggcaagtcctgcctcctcctccgcttc 240 ||||| |||||| |||| ||||||||||||||||| | ||||||| Sbjct: 106 atcggggactccaccgtgggcaagtcctgcctcctgcaccgcttc 150
>ref|XM_001118047.1| PREDICTED: Macaca mulatta similar to RAB1B, member RAS oncogene family (LOC721852), mRNA Length = 1289 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 318 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctggatggcaa 374
>ref|XM_001104910.1| PREDICTED: Macaca mulatta similar to Ras-related protein Rab-8B (RAB8B), mRNA Length = 4882 Score = 50.1 bits (25), Expect = 0.011 Identities = 61/73 (83%) Strand = Plus / Plus Query: 168 gtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcct 227 |||||| || |||||||||||||| || ||||||||||| || |||||| ||||||| Sbjct: 103 gtacgattatctcttcaagctgctgctgatcggcgactcgggggtgggcaagacctgcct 162 Query: 228 cctcctccgcttc 240 ||| |||||||| Sbjct: 163 cctgttccgcttc 175
>gb|BT016418.1| Zea mays clone Contig251 mRNA sequence Length = 1332 Score = 50.1 bits (25), Expect = 0.011 Identities = 34/37 (91%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcgg 200 |||| |||||||||||| |||| |||||||||||||| Sbjct: 207 ccgactacgactacctcatcaaactgctcctcatcgg 243
>ref|XM_871338.1| PREDICTED: Bos taurus similar to RAB1, member RAS oncogene family (LOC619025), partial mRNA Length = 275 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| | ||||| |||||||| Sbjct: 104 ctacatcagcaccatcggggtggacttcaagatccgaaccattgagctggacggcaa 160
>gb|BC016408.1| Mus musculus RAB1B, member RAS oncogene family, mRNA (cDNA clone MGC:25456 IMAGE:4242206), complete cds Length = 1859 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || |||||||| || || ||| | ||||| |||||||| Sbjct: 161 ctacatcagcaccatcggtgtggatttcaagattcgaaccattgagctggacggcaa 217
>ref|NM_017516.1| Homo sapiens RAB39, member RAS oncogene family (RAB39), mRNA gb|BC028064.1| Homo sapiens RAB39, member RAS oncogene family, mRNA (cDNA clone MGC:40186 IMAGE:5197104), complete cds Length = 1845 Score = 50.1 bits (25), Expect = 0.011 Identities = 40/45 (88%) Strand = Plus / Plus Query: 196 atcggcgactcctccgtcggcaagtcctgcctcctcctccgcttc 240 ||||| |||||| |||| ||||||||||||||||| | ||||||| Sbjct: 58 atcggggactccaccgtgggcaagtcctgcctcctgcaccgcttc 102
>dbj|AK125412.1| Homo sapiens cDNA FLJ43423 fis, clone OCBBF2026981, weakly similar to alpha 1C adrenergic receptor isoform 2 Length = 2777 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Minus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 447 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctggatggcaa 391
>gb|AF092437.1| Homo sapiens rab1B mRNA, complete cds Length = 1038 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 121 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctggatggcaa 177
>ref|XM_391049.1| Gibberella zeae PH-1 chromosome 3 YPT1_NEUCR GTP-binding protein ypt1 (FG10873.1) partial mRNA Length = 609 Score = 50.1 bits (25), Expect = 0.011 Identities = 34/37 (91%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcgg 200 |||| |||||||| ||||||||||| ||||||||||| Sbjct: 8 ccgaatacgactatctcttcaagctcctcctcatcgg 44
>ref|NM_001076233.1| Bos taurus similar to RAB1, member RAS oncogene family (LOC540685), mRNA gb|BC105393.1| Bos taurus similar to RAB1, member RAS oncogene family, mRNA (cDNA clone MGC:128300 IMAGE:7960184), complete cds Length = 2022 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| | ||||| |||||||| Sbjct: 155 ctacatcagcaccatcggggtggacttcaagatccgaaccattgagctggacggcaa 211
>dbj|AK156726.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830044G10 product:Ras-related protein Rab-1B homolog [Homo sapiens], full insert sequence Length = 1858 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || |||||||| || || ||| | ||||| |||||||| Sbjct: 189 ctacatcagcaccatcggtgtggatttcaagattcgaaccattgagctggacggcaa 245
>dbj|AB168324.1| Macaca fascicularis testis cDNA clone: QtsA-11222, similar to human RAB1B, member RAS oncogene family (RAB1B), mRNA, RefSeq: NM_030981.1 Length = 2028 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 192 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctggatggcaa 248
>ref|NM_029576.1| Mus musculus RAB1B, member RAS oncogene family (Rab1b), mRNA dbj|AK003609.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110011F09 product:RAS-RELATED PROTEIN RAB-1B homolog [Rattus norvegicus], full insert sequence Length = 1837 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || |||||||| || || ||| | ||||| |||||||| Sbjct: 167 ctacatcagcaccatcggtgtggatttcaagattcgaaccattgagctggacggcaa 223
>emb|Z73934.1|LJRAB1E L.japonicus mRNA for small GTP-binding protein, RAB1E Length = 860 Score = 50.1 bits (25), Expect = 0.011 Identities = 31/33 (93%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaat 402 |||||| |||||||||||||||||||| ||||| Sbjct: 133 ctacataagcaccatcggagttgattttaaaat 165
>emb|Z73933.1|LJRAB1D L.japonicus mRNA for small GTP-binding protein, RAB1D Length = 1129 Score = 50.1 bits (25), Expect = 0.011 Identities = 31/33 (93%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaat 402 |||||| |||||||||||||||||||| ||||| Sbjct: 384 ctacataagcaccatcggagttgattttaaaat 416
>dbj|AK042020.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630052K04 product:Ras-related protein Rab-1B homolog [Homo sapiens], full insert sequence Length = 1833 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || |||||||| || || ||| | ||||| |||||||| Sbjct: 168 ctacatcagcaccatcggtgtggatttcaagattcgaaccattgagctggacggcaa 224
>gb|BC028331.1| Homo sapiens RAB1B, member RAS oncogene family, mRNA (cDNA clone IMAGE:4537849) Length = 1926 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 154 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctggatggcaa 210
>emb|X99962.1|HSNOV2 H.sapiens mRNA for rab-related GTP-binding protein Length = 651 Score = 50.1 bits (25), Expect = 0.011 Identities = 40/45 (88%) Strand = Plus / Plus Query: 196 atcggcgactcctccgtcggcaagtcctgcctcctcctccgcttc 240 ||||| |||||| |||| ||||||||||||||||| | ||||||| Sbjct: 40 atcggggactccaccgtgggcaagtcctgcctcctgcaccgcttc 84
>emb|AL136635.1|HSM801608 Homo sapiens mRNA; cDNA DKFZp564I172 (from clone DKFZp564I172) Length = 1985 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 155 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctggatggcaa 211
>emb|AJ245875.1|HSA245875 Homo sapiens complete mRNA for putative small GTP-binding protein (rab1b) Length = 1858 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 108 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctggatggcaa 164
>emb|CR857726.1| Pongo pygmaeus mRNA; cDNA DKFZp469I1235 (from clone DKFZp469I1235) Length = 1922 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 166 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctagatggcaa 222
>dbj|AK215506.1| Mus musculus cDNA, clone:Y2G0135E11, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000025804, based on BLAT search Length = 287 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || |||||||| || || ||| | ||||| |||||||| Sbjct: 189 ctacatcagcaccatcggtgtggatttcaagattcgaaccattgagctggacggcaa 245
>dbj|AK208578.1| Mus musculus cDNA, clone:Y2G0112B08, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000025804, based on BLAT search Length = 128 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || |||||||| || || ||| | ||||| |||||||| Sbjct: 30 ctacatcagcaccatcggtgtggatttcaagattcgaaccattgagctggacggcaa 86
>emb|CR624810.1| full-length cDNA clone CS0DI083YB01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1851 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 141 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctggatggcaa 197
>emb|CR625419.1| full-length cDNA clone CS0DM005YB17 of Fetal liver of Homo sapiens (human) Length = 1844 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 131 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctggatggcaa 187
>emb|CR620997.1| full-length cDNA clone CS0DI067YJ10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1809 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 118 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctggatggcaa 174
>emb|CR612971.1| full-length cDNA clone CS0DG006YF11 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1901 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 183 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctggatggcaa 239
>emb|CR598883.1| full-length cDNA clone CS0DB004YE12 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1894 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 162 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctggatggcaa 218
>emb|CR595400.1| full-length cDNA clone CS0DB002YO10 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1882 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 162 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctggatggcaa 218
>emb|CR592347.1| full-length cDNA clone CS0DH004YE13 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1868 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 154 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctggatggcaa 210
>emb|CR591273.1| full-length cDNA clone CS0DC025YE18 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1895 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 183 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctggatggcaa 239
>emb|CR533462.1| Homo sapiens full open reading frame cDNA clone RZPDo834B0317D for gene RAB1B, RAB1B, member RAS oncogene family; complete cds, incl. stopcodon Length = 757 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 108 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctggatggcaa 164
>dbj|AP001024.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-832N8, complete sequence Length = 183444 Score = 50.1 bits (25), Expect = 0.011 Identities = 40/45 (88%) Strand = Plus / Plus Query: 196 atcggcgactcctccgtcggcaagtcctgcctcctcctccgcttc 240 ||||| |||||| |||| ||||||||||||||||| | ||||||| Sbjct: 176879 atcggggactccaccgtgggcaagtcctgcctcctgcaccgcttc 176923
>gb|BC071169.1| Homo sapiens RAB1B, member RAS oncogene family, mRNA (cDNA clone MGC:87903 IMAGE:6026121), complete cds Length = 1956 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 142 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctggatggcaa 198
>dbj|AP001107.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-867G23, complete sequences Length = 196662 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Plus Query: 370 ctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagctcgacggcaa 426 |||||||||||||||||| || || ||||| ||||| ||| ||||||| || ||||| Sbjct: 12433 ctacatcagcaccatcggggtggacttcaagatccgaaccatcgagctggatggcaa 12489
>gb|AY109628.1| Zea mays CL2811_2 mRNA sequence Length = 1222 Score = 50.1 bits (25), Expect = 0.011 Identities = 34/37 (91%) Strand = Plus / Minus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcgg 200 |||| |||||||||||| |||| |||||||||||||| Sbjct: 1070 ccgactacgactacctcatcaaactgctcctcatcgg 1034
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 50.1 bits (25), Expect = 0.011 Identities = 28/29 (96%) Strand = Plus / Minus Query: 169 tacgactacctcttcaagctgctcctcat 197 ||||||||||||||||||||||| ||||| Sbjct: 1042374 tacgactacctcttcaagctgcttctcat 1042346
>gb|M38391.1|DYGORA2 Discopyge ommata GTP-binding protein (ora2) mRNA, complete cds Length = 765 Score = 50.1 bits (25), Expect = 0.011 Identities = 61/73 (83%) Strand = Plus / Plus Query: 168 gtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcct 227 |||||| || |||||||||||||| || ||||| ||| | ||||||||| ||||||| Sbjct: 25 gtacgattatctcttcaagctgctgctgatcggtgacagcggcgtcggcaaaacctgcct 84 Query: 228 cctcctccgcttc 240 |||| |||||||| Sbjct: 85 cctcttccgcttc 97
>emb|CT834912.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA124L11, full insert sequence Length = 1095 Score = 48.1 bits (24), Expect = 0.043 Identities = 54/64 (84%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcct 223 ||||||| ||||||||||||||||| || || ||||| ||||| |||||| ||||| | Sbjct: 146 ccgagtatgactacctcttcaagcttctgctgatcggagactcgggcgtcgggaagtctt 205 Query: 224 gcct 227 |||| Sbjct: 206 gcct 209
>dbj|AK243329.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100058B03, full insert sequence Length = 943 Score = 48.1 bits (24), Expect = 0.043 Identities = 39/44 (88%) Strand = Plus / Plus Query: 365 gacacctacatcagcaccatcggagttgatttcaaaatccggac 408 |||| |||||||||||| || ||||||||||| ||||| ||||| Sbjct: 194 gacagctacatcagcacaattggagttgattttaaaatacggac 237 Score = 44.1 bits (22), Expect = 0.66 Identities = 31/34 (91%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcat 197 |||||||||||||||| ||||| || |||||||| Sbjct: 99 ccgagtacgactaccttttcaaacttctcctcat 132
>ref|NM_001069422.1| Oryza sativa (japonica cultivar-group) Os09g0327100 (Os09g0327100) mRNA, partial cds Length = 1199 Score = 48.1 bits (24), Expect = 0.043 Identities = 60/72 (83%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctc 228 ||||||||||| |||||| || | ||||||||||||||| |||||||| ||| |||| Sbjct: 149 tacgactacctgttcaaggtggtgctcatcggcgactccggggtcggcaaatccaacctc 208 Query: 229 ctcctccgcttc 240 ||| ||||||| Sbjct: 209 ctctcccgcttc 220
>ref|NM_001062296.1| Oryza sativa (japonica cultivar-group) Os05g0461300 (Os05g0461300) mRNA, complete cds Length = 1218 Score = 48.1 bits (24), Expect = 0.043 Identities = 30/32 (93%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcgg 200 |||||||||||| ||||||| ||||||||||| Sbjct: 279 tacgactacctcatcaagctcctcctcatcgg 310
>ref|NM_001054141.1| Oryza sativa (japonica cultivar-group) Os02g0653800 (Os02g0653800) mRNA, complete cds Length = 660 Score = 48.1 bits (24), Expect = 0.043 Identities = 39/44 (88%) Strand = Plus / Plus Query: 365 gacacctacatcagcaccatcggagttgatttcaaaatccggac 408 |||| |||||||||||| || ||||||||||| ||||| ||||| Sbjct: 151 gacagctacatcagcacaattggagttgattttaaaatacggac 194
>ref|XM_370465.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein (MG06962.4) partial mRNA Length = 609 Score = 48.1 bits (24), Expect = 0.043 Identities = 39/44 (88%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcatcggcgactcc 207 ||||||||||||| || |||||||| ||||| ||||| |||||| Sbjct: 8 ccgagtacgactatctgttcaagctcctccttatcggagactcc 51
>ref|XM_656793.1| Aspergillus nidulans FGSC A4 GTP-binding protein Ypt1 (AN4281.2), mRNA Length = 603 Score = 48.1 bits (24), Expect = 0.043 Identities = 63/76 (82%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctc 228 ||||| ||||||||||| || ||||| ||||| |||||| ||| || ||||||||| | Sbjct: 10 tacgattacctcttcaaacttctccttatcggagactccggcgttggaaagtcctgcttg 69 Query: 229 ctcctccgcttcgccg 244 ||||| || ||||||| Sbjct: 70 ctccttcgattcgccg 85
>gb|AC108876.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1525_A02, complete sequence Length = 93826 Score = 48.1 bits (24), Expect = 0.043 Identities = 30/32 (93%) Strand = Plus / Minus Query: 169 tacgactacctcttcaagctgctcctcatcgg 200 |||||||||||| ||||||| ||||||||||| Sbjct: 2035 tacgactacctcatcaagctcctcctcatcgg 2004
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 48.1 bits (24), Expect = 0.043 Identities = 30/32 (93%) Strand = Plus / Minus Query: 169 tacgactacctcttcaagctgctcctcatcgg 200 |||||||||||| ||||||| ||||||||||| Sbjct: 96392 tacgactacctcatcaagctcctcctcatcgg 96361
>ref|XM_850035.1| PREDICTED: Canis familiaris similar to Ras-related protein Rab-13 (LOC612294), mRNA Length = 747 Score = 48.1 bits (24), Expect = 0.043 Identities = 63/76 (82%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctc 228 |||||| ||||||||||| |||| |||||||| ||||| ||| |||||| |||| ||| Sbjct: 148 tacgaccacctcttcaagttgctgctcatcggggactcgggcgtgggcaagacctgtctc 207 Query: 229 ctcctccgcttcgccg 244 || | |||||||||| Sbjct: 208 atcattcgcttcgccg 223
>ref|NM_070996.3| Caenorhabditis elegans RAB family member (rab-1) (rab-1) mRNA, complete cds Length = 1098 Score = 48.1 bits (24), Expect = 0.043 Identities = 30/32 (93%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcgg 200 ||||||||||||||||| || ||||||||||| Sbjct: 57 tacgactacctcttcaaactcctcctcatcgg 88
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 48.1 bits (24), Expect = 0.043 Identities = 60/72 (83%) Strand = Plus / Minus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctc 228 ||||||||||| |||||| || | ||||||||||||||| |||||||| ||| |||| Sbjct: 9592794 tacgactacctgttcaaggtggtgctcatcggcgactccggggtcggcaaatccaacctc 9592735 Query: 229 ctcctccgcttc 240 ||| ||||||| Sbjct: 9592734 ctctcccgcttc 9592723
>gb|AF454364.1| Pythium cylindrosporum isolate 80171-91 ras-like protein gene, partial sequence Length = 350 Score = 48.1 bits (24), Expect = 0.043 Identities = 42/48 (87%) Strand = Plus / Plus Query: 380 accatcggagttgatttcaaaatccggaccgtcgagctcgacggcaag 427 |||||||| || |||||||| ||||| || ||||||||||||||||| Sbjct: 11 accatcggtgtggatttcaagatccgcacgatcgagctcgacggcaag 58
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 48.1 bits (24), Expect = 0.043 Identities = 48/56 (85%) Strand = Plus / Minus Query: 172 gactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcct 227 ||||||||||||||||| || |||||||| ||||| |||||| ||||| ||||| Sbjct: 109423 gactacctcttcaagcttctgctcatcggagactcgggcgtcgggaagtcttgcct 109368
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 48.1 bits (24), Expect = 0.043 Identities = 48/56 (85%) Strand = Plus / Minus Query: 172 gactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcct 227 ||||||||||||||||| || |||||||| ||||| |||||| ||||| ||||| Sbjct: 39387 gactacctcttcaagcttctgctcatcggagactcgggcgtcgggaagtcttgcct 39332
>gb|U35026.1|PHU35026 Petunia hybrida Rab1-like small GTP-binding protein mRNA, complete cds Length = 886 Score = 48.1 bits (24), Expect = 0.043 Identities = 30/32 (93%) Strand = Plus / Plus Query: 371 tacatcagcaccatcggagttgatttcaaaat 402 ||||| ||||||||||| |||||||||||||| Sbjct: 175 tacattagcaccatcggcgttgatttcaaaat 206
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 48.1 bits (24), Expect = 0.043 Identities = 60/72 (83%) Strand = Plus / Minus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctc 228 ||||||||||| |||||| || | ||||||||||||||| |||||||| ||| |||| Sbjct: 32891 tacgactacctgttcaaggtggtgctcatcggcgactccggggtcggcaaatccaacctc 32832 Query: 229 ctcctccgcttc 240 ||| ||||||| Sbjct: 32831 ctctcccgcttc 32820
>dbj|AK112021.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H04, full insert sequence Length = 1127 Score = 48.1 bits (24), Expect = 0.043 Identities = 30/32 (93%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcgg 200 |||||||||||| ||||||| ||||||||||| Sbjct: 197 tacgactacctcatcaagctcctcctcatcgg 228
>dbj|AK111972.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F01, full insert sequence Length = 1133 Score = 48.1 bits (24), Expect = 0.043 Identities = 30/32 (93%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcgg 200 |||||||||||| ||||||| ||||||||||| Sbjct: 203 tacgactacctcatcaagctcctcctcatcgg 234
>dbj|AK111917.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135H16, full insert sequence Length = 1220 Score = 48.1 bits (24), Expect = 0.043 Identities = 30/32 (93%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcgg 200 |||||||||||| ||||||| ||||||||||| Sbjct: 281 tacgactacctcatcaagctcctcctcatcgg 312
>dbj|AK071461.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092H24, full insert sequence Length = 1200 Score = 48.1 bits (24), Expect = 0.043 Identities = 60/72 (83%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctc 228 ||||||||||| |||||| || | ||||||||||||||| |||||||| ||| |||| Sbjct: 150 tacgactacctgttcaaggtggtgctcatcggcgactccggggtcggcaaatccaacctc 209 Query: 229 ctcctccgcttc 240 ||| ||||||| Sbjct: 210 ctctcccgcttc 221
>gb|U58854.1|GMU58854 Glycine max small GTP-binding protein (sra2) mRNA, complete cds Length = 885 Score = 48.1 bits (24), Expect = 0.043 Identities = 51/60 (85%) Strand = Plus / Plus Query: 357 cgtacgtcgacacctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagc 416 ||||| |||| | |||||| |||||||| ||||||||||| ||||| || ||||| |||| Sbjct: 190 cgtacatcgaaagctacataagcaccattggagttgattttaaaatacgtaccgttgagc 249
>gb|U68251.1|CEU68251 Caenorhabditis elegans rab1-like mRNA, partial cds Length = 269 Score = 48.1 bits (24), Expect = 0.043 Identities = 30/32 (93%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcgg 200 ||||||||||||||||| || ||||||||||| Sbjct: 85 tacgactacctcttcaaactcctcctcatcgg 116
>gb|L48181.1|BNAYPTRP Brassica campestris L. pekinensis ypt-related protein mRNA, complete cds Length = 817 Score = 48.1 bits (24), Expect = 0.043 Identities = 42/48 (87%) Strand = Plus / Plus Query: 165 cgagtacgactacctcttcaagctgctcctcatcggcgactcctccgt 212 |||||| || |||||||||||||| || | ||||||||||||||||| Sbjct: 60 cgagtatgattacctcttcaagcttctgttgatcggcgactcctccgt 107
>gb|U38465.1|SLU38465 Solanum lycopersicum small GTP-binding protein (LeRab1B) mRNA, complete cds Length = 860 Score = 48.1 bits (24), Expect = 0.043 Identities = 30/32 (93%) Strand = Plus / Plus Query: 371 tacatcagcaccatcggagttgatttcaaaat 402 ||||| |||||||| ||||||||||||||||| Sbjct: 178 tacattagcaccattggagttgatttcaaaat 209
>gb|L27417.1|SOYGTPBIND Soybean GTP binding protein mRNA, complete cds Length = 1025 Score = 48.1 bits (24), Expect = 0.043 Identities = 51/60 (85%) Strand = Plus / Plus Query: 357 cgtacgtcgacacctacatcagcaccatcggagttgatttcaaaatccggaccgtcgagc 416 ||||| |||| | |||||| |||||||| ||||||||||| ||||| || ||||| |||| Sbjct: 221 cgtacatcgaaagctacataagcaccattggagttgattttaaaatacgtaccgttgagc 280
>gb|DQ244598.1| Zea mays clone 9510 mRNA sequence Length = 930 Score = 46.1 bits (23), Expect = 0.17 Identities = 32/35 (91%) Strand = Plus / Plus Query: 172 gactacctcttcaagctgctcctcatcggcgactc 206 |||||||||||||||||||| ||||| || ||||| Sbjct: 123 gactacctcttcaagctgctgctcattggggactc 157
>emb|CT832048.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA052A12, full insert sequence Length = 1085 Score = 46.1 bits (23), Expect = 0.17 Identities = 35/39 (89%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcc 207 |||||||||||||||||| || | |||||||| |||||| Sbjct: 169 tacgactacctcttcaaggtggtgctcatcggggactcc 207
>ref|NM_001062868.1| Oryza sativa (japonica cultivar-group) Os05g0564400 (Os05g0564400) mRNA, complete cds Length = 1123 Score = 46.1 bits (23), Expect = 0.17 Identities = 35/39 (89%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcc 207 |||||||||||||||||| || | |||||||| |||||| Sbjct: 209 tacgactacctcttcaaggtggtgctcatcggggactcc 247
>gb|DQ213221.1| Taeniopygia guttata clone 0061P0001D11 Ras-related protein Rab-like mRNA, complete sequence Length = 904 Score = 46.1 bits (23), Expect = 0.17 Identities = 50/59 (84%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcct 227 ||||||| ||||||||||||| | || ||||||||| || ||| |||||| ||||||| Sbjct: 346 tacgacttcctcttcaagctggtgctgatcggcgacgccagcgtgggcaagacctgcct 404
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 46.1 bits (23), Expect = 0.17 Identities = 35/39 (89%) Strand = Plus / Minus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcc 207 |||||||||||||||||| || | |||||||| |||||| Sbjct: 104452 tacgactacctcttcaaggtggtgctcatcggggactcc 104414
>ref|NM_201142.1| Danio rerio zgc:56049 (zgc:56049), mRNA gb|BC047816.1| Danio rerio zgc:56049, mRNA (cDNA clone MGC:56049 IMAGE:3820257), complete cds Length = 2982 Score = 46.1 bits (23), Expect = 0.17 Identities = 32/35 (91%) Strand = Plus / Plus Query: 172 gactacctcttcaagctgctcctcatcggcgactc 206 |||||||| |||||| ||||||||||||| ||||| Sbjct: 288 gactacctgttcaagttgctcctcatcggtgactc 322
>ref|NM_169953.1| Drosophila melanogaster Rab-protein 1 CG3320-RA, transcript variant A (Rab1), mRNA Length = 1856 Score = 46.1 bits (23), Expect = 0.17 Identities = 32/35 (91%) Strand = Plus / Plus Query: 374 atcagcaccatcggagttgatttcaaaatccggac 408 |||||||| |||||||| |||||||||||| |||| Sbjct: 437 atcagcacaatcggagtggatttcaaaatcaggac 471
>ref|NM_079708.4| Drosophila melanogaster Rab-protein 1 CG3320-RB, transcript variant B (Rab1), mRNA Length = 1936 Score = 46.1 bits (23), Expect = 0.17 Identities = 32/35 (91%) Strand = Plus / Plus Query: 374 atcagcaccatcggagttgatttcaaaatccggac 408 |||||||| |||||||| |||||||||||| |||| Sbjct: 437 atcagcacaatcggagtggatttcaaaatcaggac 471
>gb|AF532626.1| Glycine max small GTP-binding protein mRNA, complete cds Length = 1263 Score = 46.1 bits (23), Expect = 0.17 Identities = 35/39 (89%) Strand = Plus / Plus Query: 165 cgagtacgactacctcttcaagctgctcctcatcggcga 203 ||||||||| ||||||||||||||| | || |||||||| Sbjct: 154 cgagtacgattacctcttcaagctggttctgatcggcga 192
>gb|AY121695.1| Drosophila melanogaster RE66843 full insert cDNA Length = 1868 Score = 46.1 bits (23), Expect = 0.17 Identities = 32/35 (91%) Strand = Plus / Plus Query: 374 atcagcaccatcggagttgatttcaaaatccggac 408 |||||||| |||||||| |||||||||||| |||| Sbjct: 437 atcagcacaatcggagtggatttcaaaatcaggac 471
>ref|XM_802521.1| Trypanosoma cruzi strain CL Brener small GTP-binding protein Rab1 (Tc00.1047053503715.30) partial mRNA Length = 633 Score = 46.1 bits (23), Expect = 0.17 Identities = 29/31 (93%) Strand = Plus / Plus Query: 214 ggcaagtcctgcctcctcctccgcttcgccg 244 |||||||| ||||||||||| |||||||||| Sbjct: 58 ggcaagtcgtgcctcctccttcgcttcgccg 88
>ref|XM_697369.1| PREDICTED: Danio rerio hypothetical protein LOC555127 (LOC555127), mRNA Length = 2689 Score = 46.1 bits (23), Expect = 0.17 Identities = 32/35 (91%) Strand = Plus / Plus Query: 172 gactacctcttcaagctgctcctcatcggcgactc 206 |||||||| |||||| ||||||||||||| ||||| Sbjct: 2 gactacctgttcaagttgctcctcatcggtgactc 36
>emb|Y08425.1|NP43GTP N.plumbaginifolia mRNA for small GTP-binding protein, clone Np43GTP Length = 1008 Score = 46.1 bits (23), Expect = 0.17 Identities = 32/35 (91%) Strand = Plus / Plus Query: 371 tacatcagcaccatcggagttgatttcaaaatccg 405 ||||||||||||||||| || ||||| |||||||| Sbjct: 251 tacatcagcaccatcggggtggattttaaaatccg 285
>dbj|AK109344.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-A06, full insert sequence Length = 1091 Score = 46.1 bits (23), Expect = 0.17 Identities = 35/39 (89%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcc 207 |||||||||||||||||| || | |||||||| |||||| Sbjct: 204 tacgactacctcttcaaggtggtgctcatcggggactcc 242
>gb|AC156365.3| Bos taurus clone RP42-18L9, complete sequence Length = 153415 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Plus Query: 509 attgatgctttggaattgtagtg 531 ||||||||||||||||||||||| Sbjct: 73274 attgatgctttggaattgtagtg 73296
>emb|BX511223.6| Zebrafish DNA sequence from clone DKEYP-96B6 in linkage group 14, complete sequence Length = 190254 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Minus Query: 312 attgactgactgattgatcgatc 334 ||||||||||||||||||||||| Sbjct: 158028 attgactgactgattgatcgatc 158006
>dbj|AK073075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033007H18, full insert sequence Length = 1124 Score = 46.1 bits (23), Expect = 0.17 Identities = 35/39 (89%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcc 207 |||||||||||||||||| || | |||||||| |||||| Sbjct: 210 tacgactacctcttcaaggtggtgctcatcggggactcc 248
>gb|AY109542.1| Zea mays CL4213_1 mRNA sequence Length = 1243 Score = 46.1 bits (23), Expect = 0.17 Identities = 29/31 (93%) Strand = Plus / Minus Query: 170 acgactacctcttcaagctgctcctcatcgg 200 |||||| |||| ||||||||||||||||||| Sbjct: 1013 acgacttcctcatcaagctgctcctcatcgg 983
>gb|U30474.1|PIU30474 Phytophthora infestans ras related protein PiYpt1 (ypt1) gene, complete cds Length = 2202 Score = 46.1 bits (23), Expect = 0.17 Identities = 32/35 (91%) Strand = Plus / Plus Query: 172 gactacctcttcaagctgctcctcatcggcgactc 206 |||||||||||||||||||| || ||||| ||||| Sbjct: 867 gactacctcttcaagctgctactgatcggtgactc 901
>dbj|D84312.1| Drosophila melanogaster mRNA for rab1, complete cds Length = 1772 Score = 46.1 bits (23), Expect = 0.17 Identities = 32/35 (91%) Strand = Plus / Plus Query: 374 atcagcaccatcggagttgatttcaaaatccggac 408 |||||||| |||||||| |||||||||||| |||| Sbjct: 347 atcagcacaatcggagtggatttcaaaatcaggac 381
>gb|M93438.1|VVCYPTV Volvox carteri small G-protein (yptV1) gene, complete cds Length = 3711 Score = 46.1 bits (23), Expect = 0.17 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 ctcatcggcgactcctccgtcggcaagtcctgcct 227 ||||||||||||||| ||| |||||||||||||| Sbjct: 1787 ctcatcggcgactccggcgtgggcaagtcctgcct 1821
>gb|DQ246120.1| Zea mays clone 20595 mRNA sequence Length = 1062 Score = 44.1 bits (22), Expect = 0.66 Identities = 31/34 (91%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcat 197 |||| ||||||||||| |||||||||||||||| Sbjct: 179 ccgactacgactaccttatcaagctgctcctcat 212
>gb|DQ244859.1| Zea mays clone 11220 mRNA sequence Length = 994 Score = 44.1 bits (22), Expect = 0.66 Identities = 34/38 (89%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactc 206 |||||||||||||||||| | | |||||||||||||| Sbjct: 191 tacgactacctcttcaaggtcgttctcatcggcgactc 228
>emb|CT832829.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA129F20, full insert sequence Length = 1274 Score = 44.1 bits (22), Expect = 0.66 Identities = 31/34 (91%) Strand = Plus / Plus Query: 171 cgactacctcttcaagctgctcctcatcggcgac 204 |||| ||||| ||||||| ||||||||||||||| Sbjct: 215 cgaccacctcatcaagctcctcctcatcggcgac 248
>emb|CT832607.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA010F03, full insert sequence Length = 939 Score = 44.1 bits (22), Expect = 0.66 Identities = 31/34 (91%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcat 197 |||||||||||||||| ||||| || |||||||| Sbjct: 114 ccgagtacgactaccttttcaaacttctcctcat 147
>ref|NM_001065650.1| Oryza sativa (japonica cultivar-group) Os07g0195100 (Os07g0195100) mRNA, partial cds Length = 1195 Score = 44.1 bits (22), Expect = 0.66 Identities = 31/34 (91%) Strand = Plus / Plus Query: 171 cgactacctcttcaagctgctcctcatcggcgac 204 |||| ||||| ||||||| ||||||||||||||| Sbjct: 210 cgaccacctcatcaagctcctcctcatcggcgac 243
>ref|NM_001050785.1| Oryza sativa (japonica cultivar-group) Os01g0750000 (Os01g0750000) mRNA, complete cds Length = 1005 Score = 44.1 bits (22), Expect = 0.66 Identities = 46/54 (85%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcc 222 ||||||||||| |||||| | | ||||||||||||||| ||| ||||||||| Sbjct: 115 tacgactacctgttcaagacggtgctcatcggcgactccggcgtgggcaagtcc 168
>ref|NM_001048737.1| Oryza sativa (japonica cultivar-group) Os01g0179700 (Os01g0179700) mRNA, complete cds Length = 1042 Score = 44.1 bits (22), Expect = 0.66 Identities = 31/34 (91%) Strand = Plus / Plus Query: 164 ccgagtacgactacctcttcaagctgctcctcat 197 |||||||||||||||| ||||| || |||||||| Sbjct: 114 ccgagtacgactaccttttcaaacttctcctcat 147
>dbj|AB232608.1| Mus musculus mRNA for Rab13, complete cds Length = 609 Score = 44.1 bits (22), Expect = 0.66 Identities = 34/38 (89%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactc 206 |||||| ||||||||||| |||| |||||||| ||||| Sbjct: 13 tacgaccacctcttcaagttgctgctcatcggggactc 50
>gb|AC119825.11| Mus musculus chromosome 3, clone RP23-358O22, complete sequence Length = 205291 Score = 44.1 bits (22), Expect = 0.66 Identities = 34/38 (89%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactc 206 |||||| ||||||||||| |||| |||||||| ||||| Sbjct: 116354 tacgaccacctcttcaagttgctgctcatcggggactc 116391
>gb|AF101310.3| Caenorhabditis elegans cosmid C39F7, complete sequence Length = 46226 Score = 44.1 bits (22), Expect = 0.66 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 cgactacctcttcaagctgctcctcatcgg 200 ||||||||||||||| || ||||||||||| Sbjct: 40002 cgactacctcttcaaactcctcctcatcgg 39973
>gb|AY327044.1| Oryza sativa (japonica cultivar-group) GTP-binding protein GTP1 mRNA, complete cds Length = 960 Score = 44.1 bits (22), Expect = 0.66 Identities = 46/54 (85%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtcc 222 ||||||||||| |||||| | | ||||||||||||||| ||| ||||||||| Sbjct: 121 tacgactacctgttcaagacggtgctcatcggcgactccggcgtgggcaagtcc 174
>ref|XM_386385.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG06209.1) partial mRNA Length = 612 Score = 44.1 bits (22), Expect = 0.66 Identities = 34/38 (89%) Strand = Plus / Plus Query: 184 aagctgctcctcatcggcgactcctccgtcggcaagtc 221 ||||||||||| || ||||||||| |||||||||||| Sbjct: 34 aagctgctcctgataggcgactccggcgtcggcaagtc 71
>gb|DQ179053.1| Phytophthora alni subsp. multiformis isolate PAM54 clone b7 RAS-related protein gene, partial sequence Length = 638 Score = 44.1 bits (22), Expect = 0.66 Identities = 43/50 (86%) Strand = Plus / Plus Query: 172 gactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtc 221 |||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 72 gactaccttttcaagctgctgctgatcggtgactcaggcgtcggcaagtc 121
>gb|DQ093990.1| Phytophthora cambivora isolate PCJC17 clone c1 RAS-related protein gene, partial sequence Length = 636 Score = 44.1 bits (22), Expect = 0.66 Identities = 43/50 (86%) Strand = Plus / Plus Query: 172 gactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtc 221 |||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 72 gactaccttttcaagctgctgctgatcggtgactcaggcgtcggcaagtc 121
>gb|DQ093988.1| Phytophthora cambivora isolate PC643 clone g1 RAS-related protein gene, partial sequence Length = 640 Score = 44.1 bits (22), Expect = 0.66 Identities = 43/50 (86%) Strand = Plus / Plus Query: 172 gactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtc 221 |||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 72 gactaccttttcaagctgctgctgatcggtgactcaggcgtcggcaagtc 121
>gb|DQ093986.1| Phytophthora fragariae var. rubi isolate PFR109 clone h1 RAS-related protein gene, partial sequence Length = 647 Score = 44.1 bits (22), Expect = 0.66 Identities = 43/50 (86%) Strand = Plus / Plus Query: 172 gactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtc 221 |||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 81 gactaccttttcaagctgctgctgatcggtgactcaggcgtcggcaagtc 130
>gb|DQ093985.1| Phytophthora fragariae var. fragariae isolate PFF309 clone h1 RAS-related protein gene, partial sequence Length = 647 Score = 44.1 bits (22), Expect = 0.66 Identities = 43/50 (86%) Strand = Plus / Plus Query: 172 gactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtc 221 |||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 81 gactaccttttcaagctgctgctgatcggtgactcaggcgtcggcaagtc 130
>gb|DQ093983.1| Phytophthora alni subsp. alni isolate PAA162 clone a2 RAS-related protein gene, partial sequence Length = 638 Score = 44.1 bits (22), Expect = 0.66 Identities = 43/50 (86%) Strand = Plus / Plus Query: 172 gactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtc 221 |||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 72 gactaccttttcaagctgctgctgatcggtgactcaggcgtcggcaagtc 121
>gb|DQ093978.1| Phytophthora alni subsp. alni isolate PAA143 clone b1 RAS-related protein gene, partial sequence Length = 638 Score = 44.1 bits (22), Expect = 0.66 Identities = 43/50 (86%) Strand = Plus / Plus Query: 172 gactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtc 221 |||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 72 gactaccttttcaagctgctgctgatcggtgactcaggcgtcggcaagtc 121
>gb|DQ093977.1| Phytophthora alni subsp. alni isolate PAA130 clone h1 RAS-related protein gene, partial sequence Length = 638 Score = 44.1 bits (22), Expect = 0.66 Identities = 43/50 (86%) Strand = Plus / Plus Query: 172 gactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtc 221 |||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 72 gactaccttttcaagctgctgctgatcggtgactcaggcgtcggcaagtc 121
>gb|DQ093969.1| Phytophthora alni subsp. multiformis isolate PAM73 clone b1 RAS-related protein gene, partial sequence Length = 586 Score = 44.1 bits (22), Expect = 0.66 Identities = 43/50 (86%) Strand = Plus / Plus Query: 172 gactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtc 221 |||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 20 gactaccttttcaagctgctgctgatcggtgactcaggcgtcggcaagtc 69
>gb|DQ093967.1| Phytophthora alni subsp. multiformis isolate PAM71 clone b1 RAS-related protein gene, partial sequence Length = 638 Score = 44.1 bits (22), Expect = 0.66 Identities = 43/50 (86%) Strand = Plus / Plus Query: 172 gactacctcttcaagctgctcctcatcggcgactcctccgtcggcaagtc 221 |||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 72 gactaccttttcaagctgctgctgatcggtgactcaggcgtcggcaagtc 121
>ref|NM_026677.1| Mus musculus RAB13, member RAS oncogene family (Rab13), mRNA dbj|AK002303.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610007N03 product:RAB13, MEMBER RAS ONCOGENE FAMILY homolog [Homo sapiens], full insert sequence Length = 1073 Score = 44.1 bits (22), Expect = 0.66 Identities = 34/38 (89%) Strand = Plus / Plus Query: 169 tacgactacctcttcaagctgctcctcatcggcgactc 206 |||||| ||||||||||| |||| |||||||| ||||| Sbjct: 95 tacgaccacctcttcaagttgctgctcatcggggactc 132 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 101,168,461 Number of extensions: 6049014 Number of successful extensions: 111386 Number of sequences better than 10.0: 322 Number of HSP's gapped: 111378 Number of HSP's successfully gapped: 380 Length of query: 701 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 679 Effective length of database: 18,508,616,841 Effective search space: 12567350835039 Effective search space used: 12567350835039 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)