ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf156f06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC113335.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1003C07, from chromosome 10, complete sequence Length = 115188 Score = 827 bits (417), Expect = 0.0 Identities = 896/1055 (84%), Gaps = 3/1055 (0%) Strand = Plus / Plus Query: 827 tactgatatctgagctaggtcagctggtgtctgtctctggagatccaatgcaacgcctag 886 |||||||||||||| |||||||| |||||||||||||||| |||||| ||||||| | | Sbjct: 67941 tactgatatctgagttaggtcagatggtgtctgtctctggtgatccattgcaacgattgg 68000 Query: 887 gagcatatatcttggaaggtcttgttgccagactttctttcactgggagtaggctgtata 946 | || ||||| |||||||| ||||||||||||||||||| | |||| |||| | | |||| Sbjct: 68001 gggcttatatgttggaaggccttgttgccagactttcttcctctggcagtaagatatata 68060 Query: 947 aatccttgaaatgcaaagaacctacaagctctgagctcatgtcctacatgcatctccttt 1006 |||||||||| || || || ||||||||||||||||||||||| ||||||||||| |||| Sbjct: 68061 aatccttgaagtgtaaggagcctacaagctctgagctcatgtcatacatgcatcttcttt 68120 Query: 1007 gtgagatctgcccattctacaagtttggttacatgtcagccaatggtgccatagcagagg 1066 ||||| |||||||||| ||| |||||||| |||||||| ||||| ||||| || || | Sbjct: 68121 acgagatatgcccattcttcaaatttggttatatgtcagctaatggcgccatcgctgaag 68180 Query: 1067 ctattaaaggcgagaacttgattcacatcattgatttccaaatcgcacaggggagccagt 1126 ||||||| || |||||||| ||||||| ||||| |||||||| ||||| ||||| || | Sbjct: 68181 ctattaagggagagaactttgttcacataattgacttccaaattgcacaagggagtcaat 68240 Query: 1127 ggataactataattcaggctcttgcagcgaggcctgggggtccaccacgcctaagaatca 1186 |||| || |||| ||||| ||||||||||||||||| || |||||| ||| |||||| Sbjct: 68241 ggatgacattaatacaggcccttgcagcgaggcctggaggaccaccatttctacgaatca 68300 Query: 1187 ctggcatagatgactcaaattctgcttatgcccgaggtggtggactggatatggttggga 1246 |||| ||||||||||| ||||||||||| ||| ||||||||||||||||||| ||||| | Sbjct: 68301 ctggtatagatgactcgaattctgcttacgccagaggtggtggactggatatagttggta 68360 Query: 1247 caaaattgcataacgtctctgcgtcatatggtctgccctttgagttcaatgctgttcatg 1306 | |||| |||| || || ||| | ||||||||||||||||||||||||||||| | Sbjct: 68361 tgagattgtataaagttgctcagtcttttggtctgccctttgagttcaatgctgttccag 68420 Query: 1307 ctgctagccatgaggtttatcttcagcaccttgatataaggcctggggaggttattgtgg 1366 ||||||||||||||||||||||| |||| ||||||||||| ||| || |||||||| | Sbjct: 68421 ctgctagccatgaggtttatcttgagcatcttgatataagagttggtgaagttattgttg 68480 Query: 1367 tgaatttcgcgtatcagctgcatcatactcccgatgaaagcgttagcatggaaaaccatc 1426 ||||||| || |||||||||||||| ||||| |||||||| || |||| |||||||||| Sbjct: 68481 tgaattttgcctatcagctgcatcacactccagatgaaagtgtaagcacagaaaaccatc 68540 Query: 1427 gggacaggattgtaagaatggtcaagagcctatcccctaaggtggtgactcttgttgagc 1486 |||| |||||| ||||||||||||||||||| ||||||| | |||||||||||||||||| Sbjct: 68541 gggataggattttaagaatggtcaagagcctctcccctaggttggtgactcttgttgagc 68600 Query: 1487 aggagtcgaatacaaacgc---cccattcttcccaagatacttggagaccctcgactact 1543 ||||||| ||||||||| | |||||||||||||||||||||||||| || ||||||| Sbjct: 68601 aggagtcaaatacaaacacacggccattcttcccaagatacttggagactcttgactact 68660 Query: 1544 acacggcaatgtttgagtcaatagacgttgctctcccgagggatgataagaggcggatta 1603 |||| || ||||||||||| ||||| || |||||||| |||||||||||||| ||||| | Sbjct: 68661 acacagccatgtttgagtcgatagatgtcgctctcccaagggatgataagagacggatga 68720 Query: 1604 gcacggagcagcactgtgttgcaagggatatcgtcaacttaatcgcgtgtgagggtgcgg 1663 || | ||||| |||||||| || |||| || ||||| |||||||| ||||||||||| | Sbjct: 68721 gcgcagagcaacactgtgtggcgcgggacattgtcaatttaatcgcatgtgagggtgctg 68780 Query: 1664 aaagggtggagaggcatgaggtgtttgggaaatggaaggcaaggtttgcaatggctggat 1723 | ||||| |||||||||||||| ||||| |||||||||||||| || | ||||| || | Sbjct: 68781 agagggtagagaggcatgaggtctttggaaaatggaaggcaagattaacgatggcagggt 68840 Query: 1724 ttaggccgtacccgctgagctcagtggtgaacaacaccatcaaaacactactgaatagct 1783 || |||| ||||||||||| ||||||||||||| ||||||||||| || || ||| | Sbjct: 68841 ttcggccatacccgctgagttcagtggtgaacagtaccatcaaaacgctgttgcatactt 68900 Query: 1784 accacagttgctacaggcttgaggagagggacggggtccttttccttggttggaagagca 1843 || | || | |||||||||||||||| | || || || |||| |||||| ||||||| || Sbjct: 68901 acaatagcttctacaggcttgaggagcgagatggtgttctttaccttggatggaagaaca 68960 Query: 1844 gagtgttggtcgtgtcttctgcatggtgctgacat 1878 |||| ||||| || |||||||||||||| |||||| Sbjct: 68961 gagtattggttgtatcttctgcatggtgttgacat 68995 Score = 216 bits (109), Expect = 3e-52 Identities = 364/449 (81%) Strand = Plus / Plus Query: 248 tcaccggtatgtcagctaaggcttcagaacgtacgtatagatgctcagatgattcacaaa 307 ||||| |||||||||||| ||||||| | | | | |||| ||| ||||||||||| |||| Sbjct: 67359 tcaccagtatgtcagctagggcttcaaaccatgcatatatatgttcagatgattctcaaa 67418 Query: 308 tggcgtactacaacaactcggtgcctttagcagaaaatggacggttctatatgatgcaaa 367 || ||||||| || ||||| ||||||| || | |||||| |||||||||| | |||| Sbjct: 67419 tgccgtactataataactcagtgccttcagggggaaatggtaggttctatataacacaaa 67478 Query: 368 atcacctggatgctcactacacatcttcaggtgatgggtcacagaaaattagctccaatc 427 |||| | ||||||||||||| | ||||| | ||||||||||||||| ||| | || | | Sbjct: 67479 atcatcaggatgctcactacgcttcttctgatgatgggtcacagaagattggttcgagcc 67538 Query: 428 ctcaagtatttgaagcacagtactgcacactcgaatcatcatcggcaaatggtacttatt 487 |||||| ||||||||| | ||||||||| || |||||||| || ||||||||| || || Sbjct: 67539 ctcaagcatttgaagcgccgtactgcactctagaatcatcctcagcaaatggtgctcatc 67598 Query: 488 ctacacagagctccacatcttctcatagcatctcccctataagtgggagccccatgtctc 547 || | || ||||| |||||||||| |||||||| ||||| || ||||||||| |||||| Sbjct: 67599 ctgcccatagctctgcatcttctcacagcatctctcctattagcgggagccccctgtctc 67658 Query: 548 agcatgacagctactcataccacacatatgattcacccccaactgtttcatgtgttactg 607 | ||||| ||| ||||| ||||||| || |||| || |||| || || ||||| || | Sbjct: 67659 atcatgatagccactcagaccacacgtacaattcccctccaagtgcatcctgtgtcacag 67718 Query: 608 agataccggatctccagagtaaactaaaggagctagaaaatgcaattcttggacctgaat 667 |||| | |||||||||| |||||| | |||||| || |||||||||||||| ||||| Sbjct: 67719 agattacagatctccagattaaactgagggagctggagaatgcaattcttgggcctgagc 67778 Query: 668 tggacatagcctctgacagccccgagagc 696 | |||||||| | ||||||||| |||||| Sbjct: 67779 tagacatagcttatgacagccctgagagc 67807 Score = 121 bits (61), Expect = 1e-23 Identities = 76/81 (93%) Strand = Plus / Plus Query: 733 tggagacagcttctgggaattaatacaggagacttgaagcaggtgatcatagcatgtggt 792 |||||||||||||||||||||||||||||||| |||||||| || |||||||||||||| Sbjct: 67844 tggagacagcttctgggaattaatacaggagatttgaagcaagtaatcatagcatgtggc 67903 Query: 793 aaggctgttgcagagaatgat 813 ||||||||||| ||||||||| Sbjct: 67904 aaggctgttgccgagaatgat 67924
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 827 bits (417), Expect = 0.0 Identities = 896/1055 (84%), Gaps = 3/1055 (0%) Strand = Plus / Minus Query: 827 tactgatatctgagctaggtcagctggtgtctgtctctggagatccaatgcaacgcctag 886 |||||||||||||| |||||||| |||||||||||||||| |||||| ||||||| | | Sbjct: 11091116 tactgatatctgagttaggtcagatggtgtctgtctctggtgatccattgcaacgattgg 11091057 Query: 887 gagcatatatcttggaaggtcttgttgccagactttctttcactgggagtaggctgtata 946 | || ||||| |||||||| ||||||||||||||||||| | |||| |||| | | |||| Sbjct: 11091056 gggcttatatgttggaaggccttgttgccagactttcttcctctggcagtaagatatata 11090997 Query: 947 aatccttgaaatgcaaagaacctacaagctctgagctcatgtcctacatgcatctccttt 1006 |||||||||| || || || ||||||||||||||||||||||| ||||||||||| |||| Sbjct: 11090996 aatccttgaagtgtaaggagcctacaagctctgagctcatgtcatacatgcatcttcttt 11090937 Query: 1007 gtgagatctgcccattctacaagtttggttacatgtcagccaatggtgccatagcagagg 1066 ||||| |||||||||| ||| |||||||| |||||||| ||||| ||||| || || | Sbjct: 11090936 acgagatatgcccattcttcaaatttggttatatgtcagctaatggcgccatcgctgaag 11090877 Query: 1067 ctattaaaggcgagaacttgattcacatcattgatttccaaatcgcacaggggagccagt 1126 ||||||| || |||||||| ||||||| ||||| |||||||| ||||| ||||| || | Sbjct: 11090876 ctattaagggagagaactttgttcacataattgacttccaaattgcacaagggagtcaat 11090817 Query: 1127 ggataactataattcaggctcttgcagcgaggcctgggggtccaccacgcctaagaatca 1186 |||| || |||| ||||| ||||||||||||||||| || |||||| ||| |||||| Sbjct: 11090816 ggatgacattaatacaggcccttgcagcgaggcctggaggaccaccatttctacgaatca 11090757 Query: 1187 ctggcatagatgactcaaattctgcttatgcccgaggtggtggactggatatggttggga 1246 |||| ||||||||||| ||||||||||| ||| ||||||||||||||||||| ||||| | Sbjct: 11090756 ctggtatagatgactcgaattctgcttacgccagaggtggtggactggatatagttggta 11090697 Query: 1247 caaaattgcataacgtctctgcgtcatatggtctgccctttgagttcaatgctgttcatg 1306 | |||| |||| || || ||| | ||||||||||||||||||||||||||||| | Sbjct: 11090696 tgagattgtataaagttgctcagtcttttggtctgccctttgagttcaatgctgttccag 11090637 Query: 1307 ctgctagccatgaggtttatcttcagcaccttgatataaggcctggggaggttattgtgg 1366 ||||||||||||||||||||||| |||| ||||||||||| ||| || |||||||| | Sbjct: 11090636 ctgctagccatgaggtttatcttgagcatcttgatataagagttggtgaagttattgttg 11090577 Query: 1367 tgaatttcgcgtatcagctgcatcatactcccgatgaaagcgttagcatggaaaaccatc 1426 ||||||| || |||||||||||||| ||||| |||||||| || |||| |||||||||| Sbjct: 11090576 tgaattttgcctatcagctgcatcacactccagatgaaagtgtaagcacagaaaaccatc 11090517 Query: 1427 gggacaggattgtaagaatggtcaagagcctatcccctaaggtggtgactcttgttgagc 1486 |||| |||||| ||||||||||||||||||| ||||||| | |||||||||||||||||| Sbjct: 11090516 gggataggattttaagaatggtcaagagcctctcccctaggttggtgactcttgttgagc 11090457 Query: 1487 aggagtcgaatacaaacgc---cccattcttcccaagatacttggagaccctcgactact 1543 ||||||| ||||||||| | |||||||||||||||||||||||||| || ||||||| Sbjct: 11090456 aggagtcaaatacaaacacacggccattcttcccaagatacttggagactcttgactact 11090397 Query: 1544 acacggcaatgtttgagtcaatagacgttgctctcccgagggatgataagaggcggatta 1603 |||| || ||||||||||| ||||| || |||||||| |||||||||||||| ||||| | Sbjct: 11090396 acacagccatgtttgagtcgatagatgtcgctctcccaagggatgataagagacggatga 11090337 Query: 1604 gcacggagcagcactgtgttgcaagggatatcgtcaacttaatcgcgtgtgagggtgcgg 1663 || | ||||| |||||||| || |||| || ||||| |||||||| ||||||||||| | Sbjct: 11090336 gcgcagagcaacactgtgtggcgcgggacattgtcaatttaatcgcatgtgagggtgctg 11090277 Query: 1664 aaagggtggagaggcatgaggtgtttgggaaatggaaggcaaggtttgcaatggctggat 1723 | ||||| |||||||||||||| ||||| |||||||||||||| || | ||||| || | Sbjct: 11090276 agagggtagagaggcatgaggtctttggaaaatggaaggcaagattaacgatggcagggt 11090217 Query: 1724 ttaggccgtacccgctgagctcagtggtgaacaacaccatcaaaacactactgaatagct 1783 || |||| ||||||||||| ||||||||||||| ||||||||||| || || ||| | Sbjct: 11090216 ttcggccatacccgctgagttcagtggtgaacagtaccatcaaaacgctgttgcatactt 11090157 Query: 1784 accacagttgctacaggcttgaggagagggacggggtccttttccttggttggaagagca 1843 || | || | |||||||||||||||| | || || || |||| |||||| ||||||| || Sbjct: 11090156 acaatagcttctacaggcttgaggagcgagatggtgttctttaccttggatggaagaaca 11090097 Query: 1844 gagtgttggtcgtgtcttctgcatggtgctgacat 1878 |||| ||||| || |||||||||||||| |||||| Sbjct: 11090096 gagtattggttgtatcttctgcatggtgttgacat 11090062 Score = 216 bits (109), Expect = 3e-52 Identities = 364/449 (81%) Strand = Plus / Minus Query: 248 tcaccggtatgtcagctaaggcttcagaacgtacgtatagatgctcagatgattcacaaa 307 ||||| |||||||||||| ||||||| | | | | |||| ||| ||||||||||| |||| Sbjct: 11091698 tcaccagtatgtcagctagggcttcaaaccatgcatatatatgttcagatgattctcaaa 11091639 Query: 308 tggcgtactacaacaactcggtgcctttagcagaaaatggacggttctatatgatgcaaa 367 || ||||||| || ||||| ||||||| || | |||||| |||||||||| | |||| Sbjct: 11091638 tgccgtactataataactcagtgccttcagggggaaatggtaggttctatataacacaaa 11091579 Query: 368 atcacctggatgctcactacacatcttcaggtgatgggtcacagaaaattagctccaatc 427 |||| | ||||||||||||| | ||||| | ||||||||||||||| ||| | || | | Sbjct: 11091578 atcatcaggatgctcactacgcttcttctgatgatgggtcacagaagattggttcgagcc 11091519 Query: 428 ctcaagtatttgaagcacagtactgcacactcgaatcatcatcggcaaatggtacttatt 487 |||||| ||||||||| | ||||||||| || |||||||| || ||||||||| || || Sbjct: 11091518 ctcaagcatttgaagcgccgtactgcactctagaatcatcctcagcaaatggtgctcatc 11091459 Query: 488 ctacacagagctccacatcttctcatagcatctcccctataagtgggagccccatgtctc 547 || | || ||||| |||||||||| |||||||| ||||| || ||||||||| |||||| Sbjct: 11091458 ctgcccatagctctgcatcttctcacagcatctctcctattagcgggagccccctgtctc 11091399 Query: 548 agcatgacagctactcataccacacatatgattcacccccaactgtttcatgtgttactg 607 | ||||| ||| ||||| ||||||| || |||| || |||| || || ||||| || | Sbjct: 11091398 atcatgatagccactcagaccacacgtacaattcccctccaagtgcatcctgtgtcacag 11091339 Query: 608 agataccggatctccagagtaaactaaaggagctagaaaatgcaattcttggacctgaat 667 |||| | |||||||||| |||||| | |||||| || |||||||||||||| ||||| Sbjct: 11091338 agattacagatctccagattaaactgagggagctggagaatgcaattcttgggcctgagc 11091279 Query: 668 tggacatagcctctgacagccccgagagc 696 | |||||||| | ||||||||| |||||| Sbjct: 11091278 tagacatagcttatgacagccctgagagc 11091250 Score = 121 bits (61), Expect = 1e-23 Identities = 76/81 (93%) Strand = Plus / Minus Query: 733 tggagacagcttctgggaattaatacaggagacttgaagcaggtgatcatagcatgtggt 792 |||||||||||||||||||||||||||||||| |||||||| || |||||||||||||| Sbjct: 11091213 tggagacagcttctgggaattaatacaggagatttgaagcaagtaatcatagcatgtggc 11091154 Query: 793 aaggctgttgcagagaatgat 813 ||||||||||| ||||||||| Sbjct: 11091153 aaggctgttgccgagaatgat 11091133
>dbj|AK058352.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-E08, full insert sequence Length = 1336 Score = 470 bits (237), Expect = e-128 Identities = 488/571 (85%), Gaps = 3/571 (0%) Strand = Plus / Plus Query: 1311 tagccatgaggtttatcttcagcaccttgatataaggcctggggaggttattgtggtgaa 1370 ||||||||||||||||||| |||| ||||||||||| ||| || |||||||| ||||| Sbjct: 321 tagccatgaggtttatcttgagcatcttgatataagagttggtgaagttattgttgtgaa 380 Query: 1371 tttcgcgtatcagctgcatcatactcccgatgaaagcgttagcatggaaaaccatcggga 1430 ||| || |||||||||||||| ||||| |||||||| || |||| |||||||||||||| Sbjct: 381 ttttgcctatcagctgcatcacactccagatgaaagtgtaagcacagaaaaccatcggga 440 Query: 1431 caggattgtaagaatggtcaagagcctatcccctaaggtggtgactcttgttgagcagga 1490 |||||| ||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 441 taggattttaagaatggtcaagagcctctcccctaggttggtgactcttgttgagcagga 500 Query: 1491 gtcgaatacaaacgc---cccattcttcccaagatacttggagaccctcgactactacac 1547 ||| ||||||||| | |||||||||||||||||||||||||| |||||||||||||| Sbjct: 501 gtcaaatacaaacacacggccattcttcccaagatacttggagactctcgactactacac 560 Query: 1548 ggcaatgtttgagtcaatagacgttgctctcccgagggatgataagaggcggattagcac 1607 || ||||||||||| ||||| || |||||||| |||||||||||||||||||| ||| | Sbjct: 561 agccatgtttgagtcgatagatgtcgctctcccaagggatgataagaggcggatgagcgc 620 Query: 1608 ggagcagcactgtgttgcaagggatatcgtcaacttaatcgcgtgtgagggtgcggaaag 1667 ||||| |||||||| || |||| || ||||| |||||||| ||||||||||| || || Sbjct: 621 agagcaacactgtgtggcgcgggacattgtcaatttaatcgcatgtgagggtgctgagag 680 Query: 1668 ggtggagaggcatgaggtgtttgggaaatggaaggcaaggtttgcaatggctggatttag 1727 ||| |||||||||||||| ||||| |||||||||||||| || | ||||| || ||| | Sbjct: 681 ggtagagaggcatgaggtctttggaaaatggaaggcaagattaacgatggcagggtttcg 740 Query: 1728 gccgtacccgctgagctcagtggtgaacaacaccatcaaaacactactgaatagctacca 1787 ||| ||||||||||| ||||||||||||| ||||||||||| || || ||| ||| | Sbjct: 741 gccatacccgctgagttcagtggtgaacagtaccatcaaaacgctgttgcatacttacaa 800 Query: 1788 cagttgctacaggcttgaggagagggacggggtccttttccttggttggaagagcagagt 1847 || | |||||||||||||||| | || || || |||| |||||| ||||||| |||||| Sbjct: 801 tagcttctacaggcttgaggagcgagatggtgttctttaccttggatggaagaacagagt 860 Query: 1848 gttggtcgtgtcttctgcatggtgctgacat 1878 ||||| || |||||||||||||| |||||| Sbjct: 861 attggttgtatcttctgcatggtgttgacat 891 Score = 121 bits (61), Expect = 1e-23 Identities = 76/81 (93%) Strand = Plus / Plus Query: 733 tggagacagcttctgggaattaatacaggagacttgaagcaggtgatcatagcatgtggt 792 |||||||||||||||||||||||||||||||| |||||||| || |||||||||||||| Sbjct: 209 tggagacagcttctgggaattaatacaggagatttgaagcaagtaatcatagcatgtggc 268 Query: 793 aaggctgttgcagagaatgat 813 ||||||||||| ||||||||| Sbjct: 269 aaggctgttgccgagaatgat 289 Score = 81.8 bits (41), Expect = 1e-11 Identities = 134/165 (81%) Strand = Plus / Plus Query: 532 gggagccccatgtctcagcatgacagctactcataccacacatatgattcacccccaact 591 ||||||||| ||||||| ||||| ||| ||||| ||||||| || |||| || |||| | Sbjct: 8 gggagccccctgtctcatcatgatagccactcagaccacacgtacaattcccctccaagt 67 Query: 592 gtttcatgtgttactgagataccggatctccagagtaaactaaaggagctagaaaatgca 651 | || ||||| || ||||| | |||||||||| |||||| | |||||| || |||||| Sbjct: 68 gcatcctgtgtcacagagattacagatctccagattaaactgagggagctggagaatgca 127 Query: 652 attcttggacctgaattggacatagcctctgacagccccgagagc 696 |||||||| ||||| | |||||||| | ||||||||| |||||| Sbjct: 128 attcttgggcctgagctagacatagcttatgacagccctgagagc 172
>ref|NM_001070988.1| Oryza sativa (japonica cultivar-group) Os10g0369600 (Os10g0369600) mRNA, partial cds Length = 1336 Score = 454 bits (229), Expect = e-124 Identities = 486/571 (85%), Gaps = 3/571 (0%) Strand = Plus / Plus Query: 1311 tagccatgaggtttatcttcagcaccttgatataaggcctggggaggttattgtggtgaa 1370 ||||||||||||||||||| |||| ||||||||||| ||| || |||||||| ||||| Sbjct: 321 tagccatgaggtttatcttgagcatcttgatataagagttggtgaagttattgttgtgaa 380 Query: 1371 tttcgcgtatcagctgcatcatactcccgatgaaagcgttagcatggaaaaccatcggga 1430 ||| || |||||||||||||| ||||| |||||||| || |||| |||||||||||||| Sbjct: 381 ttttgcctatcagctgcatcacactccagatgaaagtgtaagcacagaaaaccatcggga 440 Query: 1431 caggattgtaagaatggtcaagagcctatcccctaaggtggtgactcttgttgagcagga 1490 |||||| ||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 441 taggattttaagaatggtcaagagcctctcccctaggttggtgactcttgttgagcagga 500 Query: 1491 gtcgaatacaaacgc---cccattcttcccaagatacttggagaccctcgactactacac 1547 ||| ||||||||| | |||||||||||||||||||||||||| || ||||||||||| Sbjct: 501 gtcaaatacaaacacacggccattcttcccaagatacttggagactcttgactactacac 560 Query: 1548 ggcaatgtttgagtcaatagacgttgctctcccgagggatgataagaggcggattagcac 1607 || ||||||||||| ||||| || |||||||| |||||||||||||| ||||| ||| | Sbjct: 561 agccatgtttgagtcgatagatgtcgctctcccaagggatgataagagacggatgagcgc 620 Query: 1608 ggagcagcactgtgttgcaagggatatcgtcaacttaatcgcgtgtgagggtgcggaaag 1667 ||||| |||||||| || |||| || ||||| |||||||| ||||||||||| || || Sbjct: 621 agagcaacactgtgtggcgcgggacattgtcaatttaatcgcatgtgagggtgctgagag 680 Query: 1668 ggtggagaggcatgaggtgtttgggaaatggaaggcaaggtttgcaatggctggatttag 1727 ||| |||||||||||||| ||||| |||||||||||||| || | ||||| || ||| | Sbjct: 681 ggtagagaggcatgaggtctttggaaaatggaaggcaagattaacgatggcagggtttcg 740 Query: 1728 gccgtacccgctgagctcagtggtgaacaacaccatcaaaacactactgaatagctacca 1787 ||| ||||||||||| ||||||||||||| ||||||||||| || || ||| ||| | Sbjct: 741 gccatacccgctgagttcagtggtgaacagtaccatcaaaacgctgttgcatacttacaa 800 Query: 1788 cagttgctacaggcttgaggagagggacggggtccttttccttggttggaagagcagagt 1847 || | |||||||||||||||| | || || || |||| |||||| ||||||| |||||| Sbjct: 801 tagcttctacaggcttgaggagcgagatggtgttctttaccttggatggaagaacagagt 860 Query: 1848 gttggtcgtgtcttctgcatggtgctgacat 1878 ||||| || |||||||||||||| |||||| Sbjct: 861 attggttgtatcttctgcatggtgttgacat 891 Score = 121 bits (61), Expect = 1e-23 Identities = 76/81 (93%) Strand = Plus / Plus Query: 733 tggagacagcttctgggaattaatacaggagacttgaagcaggtgatcatagcatgtggt 792 |||||||||||||||||||||||||||||||| |||||||| || |||||||||||||| Sbjct: 209 tggagacagcttctgggaattaatacaggagatttgaagcaagtaatcatagcatgtggc 268 Query: 793 aaggctgttgcagagaatgat 813 ||||||||||| ||||||||| Sbjct: 269 aaggctgttgccgagaatgat 289 Score = 81.8 bits (41), Expect = 1e-11 Identities = 134/165 (81%) Strand = Plus / Plus Query: 532 gggagccccatgtctcagcatgacagctactcataccacacatatgattcacccccaact 591 ||||||||| ||||||| ||||| ||| ||||| ||||||| || |||| || |||| | Sbjct: 8 gggagccccctgtctcatcatgatagccactcagaccacacgtacaattcccctccaagt 67 Query: 592 gtttcatgtgttactgagataccggatctccagagtaaactaaaggagctagaaaatgca 651 | || ||||| || ||||| | |||||||||| |||||| | |||||| || |||||| Sbjct: 68 gcatcctgtgtcacagagattacagatctccagattaaactgagggagctggagaatgca 127 Query: 652 attcttggacctgaattggacatagcctctgacagccccgagagc 696 |||||||| ||||| | |||||||| | ||||||||| |||||| Sbjct: 128 attcttgggcctgagctagacatagcttatgacagccctgagagc 172
>gb|AY109543.1| Zea mays CL854_1 mRNA sequence Length = 2341 Score = 283 bits (143), Expect = 1e-72 Identities = 424/517 (82%), Gaps = 3/517 (0%) Strand = Plus / Plus Query: 1369 aatttcgcgtatcagctgcatcatactcccgatgaaagcgttagcatggaaaaccatcgg 1428 ||||| || |||||||||||||||||||| ||||| ||||| |||| ||||||||||| Sbjct: 1442 aattttgcttatcagctgcatcatactcctgatgagagcgtgggcatagaaaaccatcgt 1501 Query: 1429 gacaggattgtaagaatggtcaagagcctatcccctaaggtggtgactcttgttgagcag 1488 || || || | ||||||||||||||||| || ||||||||||| |||||||| |||||| Sbjct: 1502 gatagaatactgagaatggtcaagagcctctctcctaaggtggtaactcttgtagagcag 1561 Query: 1489 gagtcgaatacaaac---gccccattcttcccaagatacttggagaccctcgactactac 1545 ||| | || |||||| || || ||||| | |||||| ||||||| || || || ||| Sbjct: 1562 gaggcaaacacaaacacagcacctttctttcttagatacatggagactcttgattattac 1621 Query: 1546 acggcaatgtttgagtcaatagacgttgctctcccgagggatgataagaggcggattagc 1605 || || ||||||||| ||||||| |||||| ||| ||||||||||||| ||| |||||| Sbjct: 1622 acagcgatgtttgaggcaatagatgttgcttgccccagggatgataagaagcgcattagc 1681 Query: 1606 acggagcagcactgtgttgcaagggatatcgtcaacttaatcgcgtgtgagggtgcggaa 1665 || ||||| |||||||||||||||||||| ||||| ||||| || ||||| ||||||||| Sbjct: 1682 acagagcaacactgtgttgcaagggatattgtcaatttaattgcttgtgaaggtgcggaa 1741 Query: 1666 agggtggagaggcatgaggtgtttgggaaatggaaggcaaggtttgcaatggctggattt 1725 ||| | ||||| |||||| ||||| || |||| |||||| ||| ||||||||| ||| Sbjct: 1742 aggatagagagacatgagccttttggaaagtggagggcaagacttgtaatggctggtttt 1801 Query: 1726 aggccgtacccgctgagctcagtggtgaacaacaccatcaaaacactactgaatagctac 1785 || || |||||| | || |||||||||||| |||||||||||||| || | || ||| Sbjct: 1802 agaccatacccgttaagtccagtggtgaacagaaccatcaaaacactgcttgacagttac 1861 Query: 1786 cacagttgctacaggcttgaggagagggacggggtccttttccttggttggaagagcaga 1845 ||||| ||||||||||||||||| || || |||||| ||||| ||||||| |||| Sbjct: 1862 cacagccattacaggcttgaggagagagatggcatcctttatcttggctggaagaacaga 1921 Query: 1846 gtgttggtcgtgtcttctgcatggtgctgacatttcc 1882 | ||||||| |||||||| ||||||||| |||||| Sbjct: 1922 aagctggtcgtatcttctgcctggtgctgatatttcc 1958 Score = 210 bits (106), Expect = 2e-50 Identities = 227/269 (84%) Strand = Plus / Plus Query: 976 tctgagctcatgtcctacatgcatctcctttgtgagatctgcccattctacaagtttggt 1035 ||||||||| ||||||| |||||||| |||| ||||||||| ||||||| |||||| ||| Sbjct: 1049 tctgagctcttgtcctatatgcatcttctttatgagatctgtccattcttcaagttcggt 1108 Query: 1036 tacatgtcagccaatggtgccatagcagaggctattaaaggcgagaacttgattcacatc 1095 |||||||| ||||||||| ||||||| || || |||| | || | ||||||||| Sbjct: 1109 tacatgtctgccaatggtcccatagctgaagcggttaannnnnaagacattattcacatc 1168 Query: 1096 attgatttccaaatcgcacaggggagccagtggataactataattcaggctcttgcagcg 1155 || ||||| |||||||| ||||| || |||||||| ||||| || ||||| ||||| | Sbjct: 1169 atcgattttcaaatcgctcagggtagtcagtggatgactatgatacaggcccttgcttca 1228 Query: 1156 aggcctgggggtccaccacgcctaagaatcactggcatagatgactcaaattctgcttat 1215 ||||||||| | | |||| |||||| |||||||||||||||||||| ||||||||| || Sbjct: 1229 aggcctgggaggcgaccatacctaaggatcactggcatagatgactcgaattctgctcat 1288 Query: 1216 gcccgaggtggtggactggatatggttgg 1244 ||||||||||||||||||||||||||||| Sbjct: 1289 gcccgaggtggtggactggatatggttgg 1317 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 1269 gtcatatggtctgccctttgagttcaatgctgttcatgctgctagccatgaggtt 1323 ||||| |||||||||||| |||||||||||||| | || ||||| ||||||||| Sbjct: 1342 gtcatgtggtctgcccttcgagttcaatgctgtgccagcagctagtcatgaggtt 1396 Score = 52.0 bits (26), Expect = 0.009 Identities = 68/82 (82%) Strand = Plus / Plus Query: 851 tggtgtctgtctctggagatccaatgcaacgcctaggagcatatatcttggaaggtcttg 910 |||| ||||||||||| || || |||||||| || ||||| || || |||||||| || Sbjct: 918 tggtttctgtctctggtgaaccgatgcaacgtctgggagcttacatgttggaaggcctca 977 Query: 911 ttgccagactttctttcactgg 932 |||| || |||||||||||||| Sbjct: 978 ttgcgaggctttctttcactgg 999
>ref|NM_001055780.1| Oryza sativa (japonica cultivar-group) Os03g0193000 (Os03g0193000) mRNA, complete cds Length = 2535 Score = 276 bits (139), Expect = 3e-70 Identities = 495/613 (80%), Gaps = 3/613 (0%) Strand = Plus / Plus Query: 1269 gtcatatggtctgccctttgagttcaatgctgttcatgctgctagccatgaggtttatct 1328 ||||| ||||||||||||||||||||||||||| | || ||||| ||||||||| || Sbjct: 1485 gtcatgtggtctgccctttgagttcaatgctgtcccagcagctagtcatgaggttatgct 1544 Query: 1329 tcagcaccttgatataaggcctggggaggttattgtggtgaatttcgcgtatcagctgca 1388 | | || ||||||||||| |||||||||||||||| || ||||| || || |||||||| Sbjct: 1545 tgaacatcttgatataagatctggggaggttattgttgttaattttgcctaccagctgca 1604 Query: 1389 tcatactcccgatgaaagcgttagcatggaaaaccatcgggacaggattgtaagaatggt 1448 ||| ||||| ||||| || || |||| ||||| || ||||||||||| | |||||||| Sbjct: 1605 tcacactcctgatgagagtgtgggcatagaaaatcaccgggacaggatattgagaatggt 1664 Query: 1449 caagagcctatcccctaaggtggtgactcttgttgagcaggagtcgaatacaaac---gc 1505 |||| | || || || | |||||| |||||||| || ||||| | || |||||| || Sbjct: 1665 caaggggctctctccaagggtggtaactcttgtagaacaggaagcaaacacaaacactgc 1724 Query: 1506 cccattcttcccaagatacttggagaccctcgactactacacggcaatgtttgagtcaat 1565 || |||||| ||||||||||| || || || || ||||| || |||||||| | || Sbjct: 1725 acctttcttcaatagatacttggaaactcttgattattacacagctatgtttgaagctat 1784 Query: 1566 agacgttgctctcccgagggatgataagaggcggattagcacggagcagcactgtgttgc 1625 ||| |||||| ||| |||||||| |||| |||||||||||| ||||| ||||||||||| Sbjct: 1785 agatgttgcttgcccaagggatgacaagaagcggattagcactgagcaacactgtgttgc 1844 Query: 1626 aagggatatcgtcaacttaatcgcgtgtgagggtgcggaaagggtggagaggcatgaggt 1685 ||| ||||| || || || || || ||||| ||||| ||||||||||||||||| ||| Sbjct: 1845 aagagatattgttaatttgattgcatgtgaaggtgcagaaagggtggagaggcacgagcc 1904 Query: 1686 gtttgggaaatggaaggcaaggtttgcaatggctggatttaggccgtacccgctgagctc 1745 ||||| ||||||| ||||||| || |||||||||| |||||||||||||| || || | Sbjct: 1905 ttttggaaaatggagggcaaggctttcaatggctggctttaggccgtacccactaagtgc 1964 Query: 1746 agtggtgaacaacaccatcaaaacactactgaatagctaccacagttgctacaggcttga 1805 | ||||||||||||| ||||||| | ||| |||| |||||||||| ||||| ||| || Sbjct: 1965 actggtgaacaacactatcaaaaagttgctggatagttaccacagttactacaagctaga 2024 Query: 1806 ggagagggacggggtccttttccttggttggaagagcagagtgttggtcgtgtcttctgc 1865 |||||| || || | ||||| ||||| ||||||| |||| | |||| || |||||||| Sbjct: 2025 ggagagagatggtgccctttatcttggatggaagaacagaaagctggttgtatcttctgc 2084 Query: 1866 atggtgctgacat 1878 |||| | |||||| Sbjct: 2085 atggcggtgacat 2097 Score = 264 bits (133), Expect = 1e-66 Identities = 316/377 (83%) Strand = Plus / Plus Query: 862 tctggagatccaatgcaacgcctaggagcatatatcttggaaggtcttgttgccagactt 921 |||||||| || ||||||||||| ||||| ||||| |||||||| ||||||||||| ||| Sbjct: 1078 tctggagagccgatgcaacgccttggagcctatatgttggaaggccttgttgccaggctt 1137 Query: 922 tctttcactgggagtaggctgtataaatccttgaaatgcaaagaacctacaagctctgag 981 |||| |||||| | | ||||||||| |||| || ||||||||||| |||| ||| Sbjct: 1138 tcttcgactgggcatgccttatataaatccctgaagtgtaaagaacctactagcttcgag 1197 Query: 982 ctcatgtcctacatgcatctcctttgtgagatctgcccattctacaagtttggttacatg 1041 |||||||| || ||||||||||| | |||||| ||||| || | |||||||||||||||| Sbjct: 1198 ctcatgtcttatatgcatctcctctatgagatatgcccgtttttcaagtttggttacatg 1257 Query: 1042 tcagccaatggtgccatagcagaggctattaaaggcgagaacttgattcacatcattgat 1101 || |||||||| || || ||||||||| |||| ||||||||||| |||||||||| || Sbjct: 1258 tctgccaatggagcaattgcagaggctgttaagggcgagaactttgttcacatcatcgac 1317 Query: 1102 ttccaaatcgcacaggggagccagtggataactataattcaggctcttgcagcgaggcct 1161 |||||||| || || || ||||||||| |||||| || ||||| ||||| || |||||| Sbjct: 1318 ttccaaattgctcaaggtagccagtgggcaactatgatacaggcccttgctgcaaggcct 1377 Query: 1162 gggggtccaccacgcctaagaatcactggcatagatgactcaaattctgcttatgcccga 1221 ||||| |||||| ||| || || ||||| ||||||||||| |||||||| |||||||| Sbjct: 1378 gggggaccaccatacctgaggattactggtatagatgactcgaattctgcccatgcccga 1437 Query: 1222 ggtggtggactggatat 1238 ||||||||||||||||| Sbjct: 1438 ggtggtggactggatat 1454 Score = 69.9 bits (35), Expect = 4e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 724 caagatgactggagacagcttctgggaattaatacaggagacttgaagcaggtgatcata 783 |||||| ||||||| ||| ||||||||| |||||||| |||||||||||||| || | Sbjct: 940 caagataactggagggagcatctgggaatcaatacaggggacttgaagcaggtaattgca 999 Query: 784 gcatgtggtaaggctgttg 802 ||||| ||||||||||||| Sbjct: 1000 gcatgcggtaaggctgttg 1018 Score = 61.9 bits (31), Expect = 9e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 526 ataagtgggagccccatgtctcagcatgacagctactcataccacacatatgattcaccc 585 ||||||||||||||||| |||||||| || ||| ||||| | ||||||| || ||| || Sbjct: 745 ataagtgggagccccatttctcagcaagatagccactcagagcacacatctggttcccct 804 Query: 586 ccaactgtttcatgtgttactga 608 ||| || ||||||||||||||| Sbjct: 805 gcaagtgcttcatgtgttactga 827
>gb|AC150751.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNOa0279P04, complete sequence Length = 32479 Score = 276 bits (139), Expect = 3e-70 Identities = 495/613 (80%), Gaps = 3/613 (0%) Strand = Plus / Plus Query: 1269 gtcatatggtctgccctttgagttcaatgctgttcatgctgctagccatgaggtttatct 1328 ||||| ||||||||||||||||||||||||||| | || ||||| ||||||||| || Sbjct: 17149 gtcatgtggtctgccctttgagttcaatgctgtcccagcagctagtcatgaggttatgct 17208 Query: 1329 tcagcaccttgatataaggcctggggaggttattgtggtgaatttcgcgtatcagctgca 1388 | | || ||||||||||| |||||||||||||||| || ||||| || || |||||||| Sbjct: 17209 tgaacatcttgatataagatctggggaggttattgttgttaattttgcctaccagctgca 17268 Query: 1389 tcatactcccgatgaaagcgttagcatggaaaaccatcgggacaggattgtaagaatggt 1448 ||| ||||| ||||| || || |||| ||||| || ||||||||||| | |||||||| Sbjct: 17269 tcacactcctgatgagagtgtgggcatagaaaatcaccgggacaggatattgagaatggt 17328 Query: 1449 caagagcctatcccctaaggtggtgactcttgttgagcaggagtcgaatacaaac---gc 1505 |||| | || || || | |||||| |||||||| || ||||| | || |||||| || Sbjct: 17329 caaggggctctctccaagggtggtaactcttgtagaacaggaagcaaacacaaacactgc 17388 Query: 1506 cccattcttcccaagatacttggagaccctcgactactacacggcaatgtttgagtcaat 1565 || |||||| ||||||||||| || || || || ||||| || |||||||| | || Sbjct: 17389 acctttcttcaatagatacttggaaactcttgattattacacagctatgtttgaagctat 17448 Query: 1566 agacgttgctctcccgagggatgataagaggcggattagcacggagcagcactgtgttgc 1625 ||| |||||| ||| |||||||| |||| |||||||||||| ||||| ||||||||||| Sbjct: 17449 agatgttgcttgcccaagggatgacaagaagcggattagcactgagcaacactgtgttgc 17508 Query: 1626 aagggatatcgtcaacttaatcgcgtgtgagggtgcggaaagggtggagaggcatgaggt 1685 ||| ||||| || || || || || ||||| ||||| ||||||||||||||||| ||| Sbjct: 17509 aagagatattgttaatttgattgcatgtgaaggtgcagaaagggtggagaggcacgagcc 17568 Query: 1686 gtttgggaaatggaaggcaaggtttgcaatggctggatttaggccgtacccgctgagctc 1745 ||||| ||||||| ||||||| || |||||||||| |||||||||||||| || || | Sbjct: 17569 ttttggaaaatggagggcaaggctttcaatggctggctttaggccgtacccactaagtgc 17628 Query: 1746 agtggtgaacaacaccatcaaaacactactgaatagctaccacagttgctacaggcttga 1805 | ||||||||||||| ||||||| | ||| |||| |||||||||| ||||| ||| || Sbjct: 17629 actggtgaacaacactatcaaaaagttgctggatagttaccacagttactacaagctaga 17688 Query: 1806 ggagagggacggggtccttttccttggttggaagagcagagtgttggtcgtgtcttctgc 1865 |||||| || || | ||||| ||||| ||||||| |||| | |||| || |||||||| Sbjct: 17689 ggagagagatggtgccctttatcttggatggaagaacagaaagctggttgtatcttctgc 17748 Query: 1866 atggtgctgacat 1878 |||| | |||||| Sbjct: 17749 atggcggtgacat 17761 Score = 264 bits (133), Expect = 1e-66 Identities = 316/377 (83%) Strand = Plus / Plus Query: 862 tctggagatccaatgcaacgcctaggagcatatatcttggaaggtcttgttgccagactt 921 |||||||| || ||||||||||| ||||| ||||| |||||||| ||||||||||| ||| Sbjct: 16742 tctggagagccgatgcaacgccttggagcctatatgttggaaggccttgttgccaggctt 16801 Query: 922 tctttcactgggagtaggctgtataaatccttgaaatgcaaagaacctacaagctctgag 981 |||| |||||| | | ||||||||| |||| || ||||||||||| |||| ||| Sbjct: 16802 tcttcgactgggcatgccttatataaatccctgaagtgtaaagaacctactagcttcgag 16861 Query: 982 ctcatgtcctacatgcatctcctttgtgagatctgcccattctacaagtttggttacatg 1041 |||||||| || ||||||||||| | |||||| ||||| || | |||||||||||||||| Sbjct: 16862 ctcatgtcttatatgcatctcctctatgagatatgcccgtttttcaagtttggttacatg 16921 Query: 1042 tcagccaatggtgccatagcagaggctattaaaggcgagaacttgattcacatcattgat 1101 || |||||||| || || ||||||||| |||| ||||||||||| |||||||||| || Sbjct: 16922 tctgccaatggagcaattgcagaggctgttaagggcgagaactttgttcacatcatcgac 16981 Query: 1102 ttccaaatcgcacaggggagccagtggataactataattcaggctcttgcagcgaggcct 1161 |||||||| || || || ||||||||| |||||| || ||||| ||||| || |||||| Sbjct: 16982 ttccaaattgctcaaggtagccagtgggcaactatgatacaggcccttgctgcaaggcct 17041 Query: 1162 gggggtccaccacgcctaagaatcactggcatagatgactcaaattctgcttatgcccga 1221 ||||| |||||| ||| || || ||||| ||||||||||| |||||||| |||||||| Sbjct: 17042 gggggaccaccatacctgaggattactggtatagatgactcgaattctgcccatgcccga 17101 Query: 1222 ggtggtggactggatat 1238 ||||||||||||||||| Sbjct: 17102 ggtggtggactggatat 17118 Score = 69.9 bits (35), Expect = 4e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 724 caagatgactggagacagcttctgggaattaatacaggagacttgaagcaggtgatcata 783 |||||| ||||||| ||| ||||||||| |||||||| |||||||||||||| || | Sbjct: 16604 caagataactggagggagcatctgggaatcaatacaggggacttgaagcaggtaattgca 16663 Query: 784 gcatgtggtaaggctgttg 802 ||||| ||||||||||||| Sbjct: 16664 gcatgcggtaaggctgttg 16682 Score = 61.9 bits (31), Expect = 9e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 526 ataagtgggagccccatgtctcagcatgacagctactcataccacacatatgattcaccc 585 ||||||||||||||||| |||||||| || ||| ||||| | ||||||| || ||| || Sbjct: 16409 ataagtgggagccccatttctcagcaagatagccactcagagcacacatctggttcccct 16468 Query: 586 ccaactgtttcatgtgttactga 608 ||| || ||||||||||||||| Sbjct: 16469 gcaagtgcttcatgtgttactga 16491
>gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0019D17, from chromosome 3, complete sequence Length = 129658 Score = 276 bits (139), Expect = 3e-70 Identities = 495/613 (80%), Gaps = 3/613 (0%) Strand = Plus / Minus Query: 1269 gtcatatggtctgccctttgagttcaatgctgttcatgctgctagccatgaggtttatct 1328 ||||| ||||||||||||||||||||||||||| | || ||||| ||||||||| || Sbjct: 1942 gtcatgtggtctgccctttgagttcaatgctgtcccagcagctagtcatgaggttatgct 1883 Query: 1329 tcagcaccttgatataaggcctggggaggttattgtggtgaatttcgcgtatcagctgca 1388 | | || ||||||||||| |||||||||||||||| || ||||| || || |||||||| Sbjct: 1882 tgaacatcttgatataagatctggggaggttattgttgttaattttgcctaccagctgca 1823 Query: 1389 tcatactcccgatgaaagcgttagcatggaaaaccatcgggacaggattgtaagaatggt 1448 ||| ||||| ||||| || || |||| ||||| || ||||||||||| | |||||||| Sbjct: 1822 tcacactcctgatgagagtgtgggcatagaaaatcaccgggacaggatattgagaatggt 1763 Query: 1449 caagagcctatcccctaaggtggtgactcttgttgagcaggagtcgaatacaaac---gc 1505 |||| | || || || | |||||| |||||||| || ||||| | || |||||| || Sbjct: 1762 caaggggctctctccaagggtggtaactcttgtagaacaggaagcaaacacaaacactgc 1703 Query: 1506 cccattcttcccaagatacttggagaccctcgactactacacggcaatgtttgagtcaat 1565 || |||||| ||||||||||| || || || || ||||| || |||||||| | || Sbjct: 1702 acctttcttcaatagatacttggaaactcttgattattacacagctatgtttgaagctat 1643 Query: 1566 agacgttgctctcccgagggatgataagaggcggattagcacggagcagcactgtgttgc 1625 ||| |||||| ||| |||||||| |||| |||||||||||| ||||| ||||||||||| Sbjct: 1642 agatgttgcttgcccaagggatgacaagaagcggattagcactgagcaacactgtgttgc 1583 Query: 1626 aagggatatcgtcaacttaatcgcgtgtgagggtgcggaaagggtggagaggcatgaggt 1685 ||| ||||| || || || || || ||||| ||||| ||||||||||||||||| ||| Sbjct: 1582 aagagatattgttaatttgattgcatgtgaaggtgcagaaagggtggagaggcacgagcc 1523 Query: 1686 gtttgggaaatggaaggcaaggtttgcaatggctggatttaggccgtacccgctgagctc 1745 ||||| ||||||| ||||||| || |||||||||| |||||||||||||| || || | Sbjct: 1522 ttttggaaaatggagggcaaggctttcaatggctggctttaggccgtacccactaagtgc 1463 Query: 1746 agtggtgaacaacaccatcaaaacactactgaatagctaccacagttgctacaggcttga 1805 | ||||||||||||| ||||||| | ||| |||| |||||||||| ||||| ||| || Sbjct: 1462 actggtgaacaacactatcaaaaagttgctggatagttaccacagttactacaagctaga 1403 Query: 1806 ggagagggacggggtccttttccttggttggaagagcagagtgttggtcgtgtcttctgc 1865 |||||| || || | ||||| ||||| ||||||| |||| | |||| || |||||||| Sbjct: 1402 ggagagagatggtgccctttatcttggatggaagaacagaaagctggttgtatcttctgc 1343 Query: 1866 atggtgctgacat 1878 |||| | |||||| Sbjct: 1342 atggcggtgacat 1330 Score = 264 bits (133), Expect = 1e-66 Identities = 316/377 (83%) Strand = Plus / Minus Query: 862 tctggagatccaatgcaacgcctaggagcatatatcttggaaggtcttgttgccagactt 921 |||||||| || ||||||||||| ||||| ||||| |||||||| ||||||||||| ||| Sbjct: 2349 tctggagagccgatgcaacgccttggagcctatatgttggaaggccttgttgccaggctt 2290 Query: 922 tctttcactgggagtaggctgtataaatccttgaaatgcaaagaacctacaagctctgag 981 |||| |||||| | | ||||||||| |||| || ||||||||||| |||| ||| Sbjct: 2289 tcttcgactgggcatgccttatataaatccctgaagtgtaaagaacctactagcttcgag 2230 Query: 982 ctcatgtcctacatgcatctcctttgtgagatctgcccattctacaagtttggttacatg 1041 |||||||| || ||||||||||| | |||||| ||||| || | |||||||||||||||| Sbjct: 2229 ctcatgtcttatatgcatctcctctatgagatatgcccgtttttcaagtttggttacatg 2170 Query: 1042 tcagccaatggtgccatagcagaggctattaaaggcgagaacttgattcacatcattgat 1101 || |||||||| || || ||||||||| |||| ||||||||||| |||||||||| || Sbjct: 2169 tctgccaatggagcaattgcagaggctgttaagggcgagaactttgttcacatcatcgac 2110 Query: 1102 ttccaaatcgcacaggggagccagtggataactataattcaggctcttgcagcgaggcct 1161 |||||||| || || || ||||||||| |||||| || ||||| ||||| || |||||| Sbjct: 2109 ttccaaattgctcaaggtagccagtgggcaactatgatacaggcccttgctgcaaggcct 2050 Query: 1162 gggggtccaccacgcctaagaatcactggcatagatgactcaaattctgcttatgcccga 1221 ||||| |||||| ||| || || ||||| ||||||||||| |||||||| |||||||| Sbjct: 2049 gggggaccaccatacctgaggattactggtatagatgactcgaattctgcccatgcccga 1990 Query: 1222 ggtggtggactggatat 1238 ||||||||||||||||| Sbjct: 1989 ggtggtggactggatat 1973 Score = 69.9 bits (35), Expect = 4e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 724 caagatgactggagacagcttctgggaattaatacaggagacttgaagcaggtgatcata 783 |||||| ||||||| ||| ||||||||| |||||||| |||||||||||||| || | Sbjct: 2487 caagataactggagggagcatctgggaatcaatacaggggacttgaagcaggtaattgca 2428 Query: 784 gcatgtggtaaggctgttg 802 ||||| ||||||||||||| Sbjct: 2427 gcatgcggtaaggctgttg 2409 Score = 61.9 bits (31), Expect = 9e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 526 ataagtgggagccccatgtctcagcatgacagctactcataccacacatatgattcaccc 585 ||||||||||||||||| |||||||| || ||| ||||| | ||||||| || ||| || Sbjct: 2682 ataagtgggagccccatttctcagcaagatagccactcagagcacacatctggttcccct 2623 Query: 586 ccaactgtttcatgtgttactga 608 ||| || ||||||||||||||| Sbjct: 2622 gcaagtgcttcatgtgttactga 2600
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 276 bits (139), Expect = 3e-70 Identities = 495/613 (80%), Gaps = 3/613 (0%) Strand = Plus / Plus Query: 1269 gtcatatggtctgccctttgagttcaatgctgttcatgctgctagccatgaggtttatct 1328 ||||| ||||||||||||||||||||||||||| | || ||||| ||||||||| || Sbjct: 4833628 gtcatgtggtctgccctttgagttcaatgctgtcccagcagctagtcatgaggttatgct 4833687 Query: 1329 tcagcaccttgatataaggcctggggaggttattgtggtgaatttcgcgtatcagctgca 1388 | | || ||||||||||| |||||||||||||||| || ||||| || || |||||||| Sbjct: 4833688 tgaacatcttgatataagatctggggaggttattgttgttaattttgcctaccagctgca 4833747 Query: 1389 tcatactcccgatgaaagcgttagcatggaaaaccatcgggacaggattgtaagaatggt 1448 ||| ||||| ||||| || || |||| ||||| || ||||||||||| | |||||||| Sbjct: 4833748 tcacactcctgatgagagtgtgggcatagaaaatcaccgggacaggatattgagaatggt 4833807 Query: 1449 caagagcctatcccctaaggtggtgactcttgttgagcaggagtcgaatacaaac---gc 1505 |||| | || || || | |||||| |||||||| || ||||| | || |||||| || Sbjct: 4833808 caaggggctctctccaagggtggtaactcttgtagaacaggaagcaaacacaaacactgc 4833867 Query: 1506 cccattcttcccaagatacttggagaccctcgactactacacggcaatgtttgagtcaat 1565 || |||||| ||||||||||| || || || || ||||| || |||||||| | || Sbjct: 4833868 acctttcttcaatagatacttggaaactcttgattattacacagctatgtttgaagctat 4833927 Query: 1566 agacgttgctctcccgagggatgataagaggcggattagcacggagcagcactgtgttgc 1625 ||| |||||| ||| |||||||| |||| |||||||||||| ||||| ||||||||||| Sbjct: 4833928 agatgttgcttgcccaagggatgacaagaagcggattagcactgagcaacactgtgttgc 4833987 Query: 1626 aagggatatcgtcaacttaatcgcgtgtgagggtgcggaaagggtggagaggcatgaggt 1685 ||| ||||| || || || || || ||||| ||||| ||||||||||||||||| ||| Sbjct: 4833988 aagagatattgttaatttgattgcatgtgaaggtgcagaaagggtggagaggcacgagcc 4834047 Query: 1686 gtttgggaaatggaaggcaaggtttgcaatggctggatttaggccgtacccgctgagctc 1745 ||||| ||||||| ||||||| || |||||||||| |||||||||||||| || || | Sbjct: 4834048 ttttggaaaatggagggcaaggctttcaatggctggctttaggccgtacccactaagtgc 4834107 Query: 1746 agtggtgaacaacaccatcaaaacactactgaatagctaccacagttgctacaggcttga 1805 | ||||||||||||| ||||||| | ||| |||| |||||||||| ||||| ||| || Sbjct: 4834108 actggtgaacaacactatcaaaaagttgctggatagttaccacagttactacaagctaga 4834167 Query: 1806 ggagagggacggggtccttttccttggttggaagagcagagtgttggtcgtgtcttctgc 1865 |||||| || || | ||||| ||||| ||||||| |||| | |||| || |||||||| Sbjct: 4834168 ggagagagatggtgccctttatcttggatggaagaacagaaagctggttgtatcttctgc 4834227 Query: 1866 atggtgctgacat 1878 |||| | |||||| Sbjct: 4834228 atggcggtgacat 4834240 Score = 264 bits (133), Expect = 1e-66 Identities = 316/377 (83%) Strand = Plus / Plus Query: 862 tctggagatccaatgcaacgcctaggagcatatatcttggaaggtcttgttgccagactt 921 |||||||| || ||||||||||| ||||| ||||| |||||||| ||||||||||| ||| Sbjct: 4833221 tctggagagccgatgcaacgccttggagcctatatgttggaaggccttgttgccaggctt 4833280 Query: 922 tctttcactgggagtaggctgtataaatccttgaaatgcaaagaacctacaagctctgag 981 |||| |||||| | | ||||||||| |||| || ||||||||||| |||| ||| Sbjct: 4833281 tcttcgactgggcatgccttatataaatccctgaagtgtaaagaacctactagcttcgag 4833340 Query: 982 ctcatgtcctacatgcatctcctttgtgagatctgcccattctacaagtttggttacatg 1041 |||||||| || ||||||||||| | |||||| ||||| || | |||||||||||||||| Sbjct: 4833341 ctcatgtcttatatgcatctcctctatgagatatgcccgtttttcaagtttggttacatg 4833400 Query: 1042 tcagccaatggtgccatagcagaggctattaaaggcgagaacttgattcacatcattgat 1101 || |||||||| || || ||||||||| |||| ||||||||||| |||||||||| || Sbjct: 4833401 tctgccaatggagcaattgcagaggctgttaagggcgagaactttgttcacatcatcgac 4833460 Query: 1102 ttccaaatcgcacaggggagccagtggataactataattcaggctcttgcagcgaggcct 1161 |||||||| || || || ||||||||| |||||| || ||||| ||||| || |||||| Sbjct: 4833461 ttccaaattgctcaaggtagccagtgggcaactatgatacaggcccttgctgcaaggcct 4833520 Query: 1162 gggggtccaccacgcctaagaatcactggcatagatgactcaaattctgcttatgcccga 1221 ||||| |||||| ||| || || ||||| ||||||||||| |||||||| |||||||| Sbjct: 4833521 gggggaccaccatacctgaggattactggtatagatgactcgaattctgcccatgcccga 4833580 Query: 1222 ggtggtggactggatat 1238 ||||||||||||||||| Sbjct: 4833581 ggtggtggactggatat 4833597 Score = 69.9 bits (35), Expect = 4e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 724 caagatgactggagacagcttctgggaattaatacaggagacttgaagcaggtgatcata 783 |||||| ||||||| ||| ||||||||| |||||||| |||||||||||||| || | Sbjct: 4833083 caagataactggagggagcatctgggaatcaatacaggggacttgaagcaggtaattgca 4833142 Query: 784 gcatgtggtaaggctgttg 802 ||||| ||||||||||||| Sbjct: 4833143 gcatgcggtaaggctgttg 4833161 Score = 61.9 bits (31), Expect = 9e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 526 ataagtgggagccccatgtctcagcatgacagctactcataccacacatatgattcaccc 585 ||||||||||||||||| |||||||| || ||| ||||| | ||||||| || ||| || Sbjct: 4832888 ataagtgggagccccatttctcagcaagatagccactcagagcacacatctggttcccct 4832947 Query: 586 ccaactgtttcatgtgttactga 608 ||| || ||||||||||||||| Sbjct: 4832948 gcaagtgcttcatgtgttactga 4832970
>dbj|AK073386.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041E22, full insert sequence Length = 2582 Score = 276 bits (139), Expect = 3e-70 Identities = 495/613 (80%), Gaps = 3/613 (0%) Strand = Plus / Plus Query: 1269 gtcatatggtctgccctttgagttcaatgctgttcatgctgctagccatgaggtttatct 1328 ||||| ||||||||||||||||||||||||||| | || ||||| ||||||||| || Sbjct: 1486 gtcatgtggtctgccctttgagttcaatgctgtcccagcagctagtcatgaggttatgct 1545 Query: 1329 tcagcaccttgatataaggcctggggaggttattgtggtgaatttcgcgtatcagctgca 1388 | | || ||||||||||| |||||||||||||||| || ||||| || || |||||||| Sbjct: 1546 tgaacatcttgatataagatctggggaggttattgttgttaattttgcctaccagctgca 1605 Query: 1389 tcatactcccgatgaaagcgttagcatggaaaaccatcgggacaggattgtaagaatggt 1448 ||| ||||| ||||| || || |||| ||||| || ||||||||||| | |||||||| Sbjct: 1606 tcacactcctgatgagagtgtgggcatagaaaatcaccgggacaggatattgagaatggt 1665 Query: 1449 caagagcctatcccctaaggtggtgactcttgttgagcaggagtcgaatacaaac---gc 1505 |||| | || || || | |||||| |||||||| || ||||| | || |||||| || Sbjct: 1666 caaggggctctctccaagggtggtaactcttgtagaacaggaagcaaacacaaacactgc 1725 Query: 1506 cccattcttcccaagatacttggagaccctcgactactacacggcaatgtttgagtcaat 1565 || |||||| ||||||||||| || || || || ||||| || |||||||| | || Sbjct: 1726 acctttcttcaatagatacttggaaactcttgattattacacagctatgtttgaagctat 1785 Query: 1566 agacgttgctctcccgagggatgataagaggcggattagcacggagcagcactgtgttgc 1625 ||| |||||| ||| |||||||| |||| |||||||||||| ||||| ||||||||||| Sbjct: 1786 agatgttgcttgcccaagggatgacaagaagcggattagcactgagcaacactgtgttgc 1845 Query: 1626 aagggatatcgtcaacttaatcgcgtgtgagggtgcggaaagggtggagaggcatgaggt 1685 ||| ||||| || || || || || ||||| ||||| ||||||||||||||||| ||| Sbjct: 1846 aagagatattgttaatttgattgcatgtgaaggtgcagaaagggtggagaggcacgagcc 1905 Query: 1686 gtttgggaaatggaaggcaaggtttgcaatggctggatttaggccgtacccgctgagctc 1745 ||||| ||||||| ||||||| || |||||||||| |||||||||||||| || || | Sbjct: 1906 ttttggaaaatggagggcaaggctttcaatggctggctttaggccgtacccactaagtgc 1965 Query: 1746 agtggtgaacaacaccatcaaaacactactgaatagctaccacagttgctacaggcttga 1805 | ||||||||||||| ||||||| | ||| |||| |||||||||| ||||| ||| || Sbjct: 1966 actggtgaacaacactatcaaaaagttgctggatagttaccacagttactacaagctaga 2025 Query: 1806 ggagagggacggggtccttttccttggttggaagagcagagtgttggtcgtgtcttctgc 1865 |||||| || || | ||||| ||||| ||||||| |||| | |||| || |||||||| Sbjct: 2026 ggagagagatggtgccctttatcttggatggaagaacagaaagctggttgtatcttctgc 2085 Query: 1866 atggtgctgacat 1878 |||| | |||||| Sbjct: 2086 atggcggtgacat 2098 Score = 264 bits (133), Expect = 1e-66 Identities = 316/377 (83%) Strand = Plus / Plus Query: 862 tctggagatccaatgcaacgcctaggagcatatatcttggaaggtcttgttgccagactt 921 |||||||| || ||||||||||| ||||| ||||| |||||||| ||||||||||| ||| Sbjct: 1079 tctggagagccgatgcaacgccttggagcctatatgttggaaggccttgttgccaggctt 1138 Query: 922 tctttcactgggagtaggctgtataaatccttgaaatgcaaagaacctacaagctctgag 981 |||| |||||| | | ||||||||| |||| || ||||||||||| |||| ||| Sbjct: 1139 tcttcgactgggcatgccttatataaatccctgaagtgtaaagaacctactagcttcgag 1198 Query: 982 ctcatgtcctacatgcatctcctttgtgagatctgcccattctacaagtttggttacatg 1041 |||||||| || ||||||||||| | |||||| ||||| || | |||||||||||||||| Sbjct: 1199 ctcatgtcttatatgcatctcctctatgagatatgcccgtttttcaagtttggttacatg 1258 Query: 1042 tcagccaatggtgccatagcagaggctattaaaggcgagaacttgattcacatcattgat 1101 || |||||||| || || ||||||||| |||| ||||||||||| |||||||||| || Sbjct: 1259 tctgccaatggagcaattgcagaggctgttaagggcgagaactttgttcacatcatcgac 1318 Query: 1102 ttccaaatcgcacaggggagccagtggataactataattcaggctcttgcagcgaggcct 1161 |||||||| || || || ||||||||| |||||| || ||||| ||||| || |||||| Sbjct: 1319 ttccaaattgctcaaggtagccagtgggcaactatgatacaggcccttgctgcaaggcct 1378 Query: 1162 gggggtccaccacgcctaagaatcactggcatagatgactcaaattctgcttatgcccga 1221 ||||| |||||| ||| || || ||||| ||||||||||| |||||||| |||||||| Sbjct: 1379 gggggaccaccatacctgaggattactggtatagatgactcgaattctgcccatgcccga 1438 Query: 1222 ggtggtggactggatat 1238 ||||||||||||||||| Sbjct: 1439 ggtggtggactggatat 1455 Score = 69.9 bits (35), Expect = 4e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 724 caagatgactggagacagcttctgggaattaatacaggagacttgaagcaggtgatcata 783 |||||| ||||||| ||| ||||||||| |||||||| |||||||||||||| || | Sbjct: 941 caagataactggagggagcatctgggaatcaatacaggggacttgaagcaggtaattgca 1000 Query: 784 gcatgtggtaaggctgttg 802 ||||| ||||||||||||| Sbjct: 1001 gcatgcggtaaggctgttg 1019 Score = 61.9 bits (31), Expect = 9e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 526 ataagtgggagccccatgtctcagcatgacagctactcataccacacatatgattcaccc 585 ||||||||||||||||| |||||||| || ||| ||||| | ||||||| || ||| || Sbjct: 746 ataagtgggagccccatttctcagcaagatagccactcagagcacacatctggttcccct 805 Query: 586 ccaactgtttcatgtgttactga 608 ||| || ||||||||||||||| Sbjct: 806 gcaagtgcttcatgtgttactga 828
>gb|BT014572.1| Lycopersicon esculentum clone 134027R, mRNA sequence Length = 2086 Score = 61.9 bits (31), Expect = 9e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 946 aaatccttgaaatgcaaagaacctacaagctctgagctcatgtcctacatgcatctcctt 1005 |||||||||| |||||||||||| |||| | |||||| |||| || ||||| | ||| Sbjct: 993 aaatccttgagatgcaaagaacccgcaagttttgagctgttgtcttatatgcacgttctt 1052 Query: 1006 tgtgagatctgcccattctacaagtttggttacatgtcagccaatggtgccatagcaga 1064 | ||||| ||||| | || ||| ||||| ||||||||||| ||||||||||| ||||| Sbjct: 1053 tacgagatttgcccttacttcaaatttggatacatgtcagctaatggtgccattgcaga 1111 Score = 42.1 bits (21), Expect = 8.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 886 ggagcatatatcttggaaggtcttgttgc 914 |||||||| ||||||||||| |||||||| Sbjct: 933 ggagcatacatcttggaagggcttgttgc 961
>gb|BT026455.1| Arabidopsis thaliana At2g04890 mRNA, complete cds Length = 1242 Score = 60.0 bits (30), Expect = 4e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 1086 gattcacatcattgatttccaaatcgcacaggggagccagtggataactataattcaggc 1145 ||||||||| ||||| |||||||| | ||| ||||||||||||||| | | || ||||| Sbjct: 471 gattcacattattgacttccaaattggacaagggagccagtggatagcacttatccaggc 530 Query: 1146 tcttgcagcgaggcctgg 1163 | ||||||| |||||||| Sbjct: 531 ttttgcagctaggcctgg 548
>ref|NM_126521.2| Arabidopsis thaliana SCL21 (SCARECROW-LIKE 21); transcription factor (SCL21) mRNA, complete cds Length = 2220 Score = 60.0 bits (30), Expect = 4e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 1086 gattcacatcattgatttccaaatcgcacaggggagccagtggataactataattcaggc 1145 ||||||||| ||||| |||||||| | ||| ||||||||||||||| | | || ||||| Sbjct: 655 gattcacattattgacttccaaattggacaagggagccagtggatagcacttatccaggc 714 Query: 1146 tcttgcagcgaggcctgg 1163 | ||||||| |||||||| Sbjct: 715 ttttgcagctaggcctgg 732
>dbj|AK221099.1| Arabidopsis thaliana mRNA for putative SCARECROW gene regulator, complete cds, clone: RAFL22-85-M15 Length = 1526 Score = 60.0 bits (30), Expect = 4e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 1086 gattcacatcattgatttccaaatcgcacaggggagccagtggataactataattcaggc 1145 ||||||||| ||||| |||||||| | ||| ||||||||||||||| | | || ||||| Sbjct: 628 gattcacattattgacttccaaattggacaagggagccagtggatagcacttatccaggc 687 Query: 1146 tcttgcagcgaggcctgg 1163 | ||||||| |||||||| Sbjct: 688 ttttgcagctaggcctgg 705
>gb|AC007211.6| Arabidopsis thaliana chromosome 2 BAC F1O13 genomic sequence, complete sequence Length = 103889 Score = 60.0 bits (30), Expect = 4e-05 Identities = 66/78 (84%) Strand = Plus / Minus Query: 1086 gattcacatcattgatttccaaatcgcacaggggagccagtggataactataattcaggc 1145 ||||||||| ||||| |||||||| | ||| ||||||||||||||| | | || ||||| Sbjct: 2915 gattcacattattgacttccaaattggacaagggagccagtggatagcacttatccaggc 2856 Query: 1146 tcttgcagcgaggcctgg 1163 | ||||||| |||||||| Sbjct: 2855 ttttgcagctaggcctgg 2838
>gb|AC006955.6| Arabidopsis thaliana chromosome 2 clone F28I8 map RNS1, complete sequence Length = 116217 Score = 60.0 bits (30), Expect = 4e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 1086 gattcacatcattgatttccaaatcgcacaggggagccagtggataactataattcaggc 1145 ||||||||| ||||| |||||||| | ||| ||||||||||||||| | | || ||||| Sbjct: 7873 gattcacattattgacttccaaattggacaagggagccagtggatagcacttatccaggc 7932 Query: 1146 tcttgcagcgaggcctgg 1163 | ||||||| |||||||| Sbjct: 7933 ttttgcagctaggcctgg 7950
>dbj|AK175990.1| Arabidopsis thaliana mRNA for putative SCARECROW gene regulator, complete cds, clone: RAFL22-68-E12 Length = 1526 Score = 60.0 bits (30), Expect = 4e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 1086 gattcacatcattgatttccaaatcgcacaggggagccagtggataactataattcaggc 1145 ||||||||| ||||| |||||||| | ||| ||||||||||||||| | | || ||||| Sbjct: 628 gattcacattattgacttccaaattggacaagggagccagtggatagcacttatccaggc 687 Query: 1146 tcttgcagcgaggcctgg 1163 | ||||||| |||||||| Sbjct: 688 ttttgcagctaggcctgg 705
>dbj|AK175210.1| Arabidopsis thaliana mRNA for putative SCARECROW gene regulator, complete cds, clone: RAFL21-63-H23 Length = 1617 Score = 60.0 bits (30), Expect = 4e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 1086 gattcacatcattgatttccaaatcgcacaggggagccagtggataactataattcaggc 1145 ||||||||| ||||| |||||||| | ||| ||||||||||||||| | | || ||||| Sbjct: 628 gattcacattattgacttccaaattggacaagggagccagtggatagcacttatccaggc 687 Query: 1146 tcttgcagcgaggcctgg 1163 | ||||||| |||||||| Sbjct: 688 ttttgcagctaggcctgg 705
>gb|AF210732.1|AF210732 Arabidopsis thaliana scarecrow-like 21 (SCL21) mRNA, complete cds Length = 1634 Score = 60.0 bits (30), Expect = 4e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 1086 gattcacatcattgatttccaaatcgcacaggggagccagtggataactataattcaggc 1145 ||||||||| ||||| |||||||| | ||| ||||||||||||||| | | || ||||| Sbjct: 655 gattcacattattgacttccaaattggacaagggagccagtggatagcacttatccaggc 714 Query: 1146 tcttgcagcgaggcctgg 1163 | ||||||| |||||||| Sbjct: 715 ttttgcagctaggcctgg 732
>emb|BX818810.1|CNS0A9T0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB15ZE12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1588 Score = 60.0 bits (30), Expect = 4e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 1086 gattcacatcattgatttccaaatcgcacaggggagccagtggataactataattcaggc 1145 ||||||||| ||||| |||||||| | ||| ||||||||||||||| | | || ||||| Sbjct: 636 gattcacattattgacttccaaattggacaagggagccagtggatagcacttatccaggc 695 Query: 1146 tcttgcagcgaggcctgg 1163 | ||||||| |||||||| Sbjct: 696 ttttgcagctaggcctgg 713
>gb|DQ409174.1| Bambusa ventricosa putative chitin-inducible gibberellin-responsive protein mRNA, complete cds Length = 2102 Score = 56.0 bits (28), Expect = 6e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 952 ttgaaatgcaaagaacctacaagctctgagctcatgtcctacatgcatctcctttgtgag 1011 ||||| ||||||||||| | || ||||| ||| |||||||||||||| |||| | |||| Sbjct: 921 ttgaagtgcaaagaaccaaggagttctgacctcctgtcctacatgcatttcctgtatgag 980 Query: 1012 atctgcccattctacaagtttggttacatgtc 1043 |||||| |||| |||||| || |||||||| Sbjct: 981 gcctgccccttcttcaagttcggctacatgtc 1012
>gb|BT025326.1| Arabidopsis thaliana At5g48150 mRNA, complete cds Length = 1473 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 1441 agaatggtcaagagcctatcccctaaggtggtgactcttgttgagcaggagtcgaataca 1500 |||||||| |||||| |||| || ||||||||||||||||| || || ||||| || ||| Sbjct: 1036 agaatggtgaagagcttatctcccaaggtggtgactcttgtggaacaagagtcaaacaca 1095 Query: 1501 aac 1503 ||| Sbjct: 1096 aac 1098 Score = 52.0 bits (26), Expect = 0.009 Identities = 110/138 (79%) Strand = Plus / Plus Query: 1026 caagtttggttacatgtcagccaatggtgccatagcagaggctattaaaggcgagaactt 1085 ||||||||| ||||||||||| |||||||| || || ||||| || || | || ||| Sbjct: 621 caagtttggatacatgtcagcaaatggtgctattgctgaggcaatgaaggaagaaaacag 680 Query: 1086 gattcacatcattgatttccaaatcgcacaggggagccagtggataactataattcaggc 1145 ||||||| |||||||||||||||| || ||||| || ||| | ||| | || ||||| Sbjct: 681 agttcacattattgatttccaaatcggtcaagggagtcaatgggtcactcttatccaggc 740 Query: 1146 tcttgcagcgaggcctgg 1163 | ||||||| |||||||| Sbjct: 741 ttttgcagctaggcctgg 758
>ref|NM_203174.1| Arabidopsis thaliana PAT1 (PHYTOCHROME A SIGNAL TRANSDUCTION 1); transcription factor (PAT1) mRNA, complete cds Length = 1927 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 1441 agaatggtcaagagcctatcccctaaggtggtgactcttgttgagcaggagtcgaataca 1500 |||||||| |||||| |||| || ||||||||||||||||| || || ||||| || ||| Sbjct: 1252 agaatggtgaagagcttatctcccaaggtggtgactcttgtggaacaagagtcaaacaca 1311 Query: 1501 aac 1503 ||| Sbjct: 1312 aac 1314 Score = 52.0 bits (26), Expect = 0.009 Identities = 110/138 (79%) Strand = Plus / Plus Query: 1026 caagtttggttacatgtcagccaatggtgccatagcagaggctattaaaggcgagaactt 1085 ||||||||| ||||||||||| |||||||| || || ||||| || || | || ||| Sbjct: 837 caagtttggatacatgtcagcaaatggtgctattgctgaggcaatgaaggaagaaaacag 896 Query: 1086 gattcacatcattgatttccaaatcgcacaggggagccagtggataactataattcaggc 1145 ||||||| |||||||||||||||| || ||||| || ||| | ||| | || ||||| Sbjct: 897 agttcacattattgatttccaaatcggtcaagggagtcaatgggtcactcttatccaggc 956 Query: 1146 tcttgcagcgaggcctgg 1163 | ||||||| |||||||| Sbjct: 957 ttttgcagctaggcctgg 974
>ref|NM_124189.3| Arabidopsis thaliana PAT1 (PHYTOCHROME A SIGNAL TRANSDUCTION 1); transcription factor (PAT1) mRNA, complete cds Length = 1852 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 1441 agaatggtcaagagcctatcccctaaggtggtgactcttgttgagcaggagtcgaataca 1500 |||||||| |||||| |||| || ||||||||||||||||| || || ||||| || ||| Sbjct: 1177 agaatggtgaagagcttatctcccaaggtggtgactcttgtggaacaagagtcaaacaca 1236 Query: 1501 aac 1503 ||| Sbjct: 1237 aac 1239 Score = 52.0 bits (26), Expect = 0.009 Identities = 110/138 (79%) Strand = Plus / Plus Query: 1026 caagtttggttacatgtcagccaatggtgccatagcagaggctattaaaggcgagaactt 1085 ||||||||| ||||||||||| |||||||| || || ||||| || || | || ||| Sbjct: 762 caagtttggatacatgtcagcaaatggtgctattgctgaggcaatgaaggaagaaaacag 821 Query: 1086 gattcacatcattgatttccaaatcgcacaggggagccagtggataactataattcaggc 1145 ||||||| |||||||||||||||| || ||||| || ||| | ||| | || ||||| Sbjct: 822 agttcacattattgatttccaaatcggtcaagggagtcaatgggtcactcttatccaggc 881 Query: 1146 tcttgcagcgaggcctgg 1163 | ||||||| |||||||| Sbjct: 882 ttttgcagctaggcctgg 899
>dbj|AK117483.1| Arabidopsis thaliana At5g48150 mRNA for putative SCARECROW gene regulator, complete cds, clone: RAFL17-10-L05 Length = 1461 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 1441 agaatggtcaagagcctatcccctaaggtggtgactcttgttgagcaggagtcgaataca 1500 |||||||| |||||| |||| || ||||||||||||||||| || || ||||| || ||| Sbjct: 896 agaatggtgaagagcttatctcccaaggtggtgactcttgtggaacaagagtcaaacaca 955 Query: 1501 aac 1503 ||| Sbjct: 956 aac 958 Score = 52.0 bits (26), Expect = 0.009 Identities = 110/138 (79%) Strand = Plus / Plus Query: 1026 caagtttggttacatgtcagccaatggtgccatagcagaggctattaaaggcgagaactt 1085 ||||||||| ||||||||||| |||||||| || || ||||| || || | || ||| Sbjct: 481 caagtttggatacatgtcagcaaatggtgctattgctgaggcaatgaaggaagaaaacag 540 Query: 1086 gattcacatcattgatttccaaatcgcacaggggagccagtggataactataattcaggc 1145 ||||||| |||||||||||||||| || ||||| || ||| | ||| | || ||||| Sbjct: 541 agttcacattattgatttccaaatcggtcaagggagtcaatgggtcactcttatccaggc 600 Query: 1146 tcttgcagcgaggcctgg 1163 | ||||||| |||||||| Sbjct: 601 ttttgcagctaggcctgg 618
>dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIF21 Length = 59372 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Minus Query: 1441 agaatggtcaagagcctatcccctaaggtggtgactcttgttgagcaggagtcgaataca 1500 |||||||| |||||| |||| || ||||||||||||||||| || || ||||| || ||| Sbjct: 14549 agaatggtgaagagcttatctcccaaggtggtgactcttgtggaacaagagtcaaacaca 14490 Query: 1501 aac 1503 ||| Sbjct: 14489 aac 14487 Score = 52.0 bits (26), Expect = 0.009 Identities = 110/138 (79%) Strand = Plus / Minus Query: 1026 caagtttggttacatgtcagccaatggtgccatagcagaggctattaaaggcgagaactt 1085 ||||||||| ||||||||||| |||||||| || || ||||| || || | || ||| Sbjct: 15048 caagtttggatacatgtcagcaaatggtgctattgctgaggcaatgaaggaagaaaacag 14989 Query: 1086 gattcacatcattgatttccaaatcgcacaggggagccagtggataactataattcaggc 1145 ||||||| |||||||||||||||| || ||||| || ||| | ||| | || ||||| Sbjct: 14988 agttcacattattgatttccaaatcggtcaagggagtcaatgggtcactcttatccaggc 14929 Query: 1146 tcttgcagcgaggcctgg 1163 | ||||||| |||||||| Sbjct: 14928 ttttgcagctaggcctgg 14911
>dbj|AP006668.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT16B20, TM0367, complete sequence Length = 112717 Score = 54.0 bits (27), Expect = 0.002 Identities = 132/167 (79%) Strand = Plus / Minus Query: 1552 atgtttgagtcaatagacgttgctctcccgagggatgataagaggcggattagcacggag 1611 |||| |||||||||||| || || ||||| || |||||||||| |||| || ||||| Sbjct: 89391 atgtatgagtcaatagatgtcgccctccctagagatgataagaataggatcagtgcggag 89332 Query: 1612 cagcactgtgttgcaagggatatcgtcaacttaatcgcgtgtgagggtgcggaaagggtg 1671 |||||||| || || | || || |||||| | || || || ||||| ||||| |||||| Sbjct: 89331 cagcactgcgtagcgcgtgacattgtcaacatgattgcttgcgagggggcggagagggtg 89272 Query: 1672 gagaggcatgaggtgtttgggaaatggaaggcaaggtttgcaatggc 1718 || ||||||||| | ||||| || |||| | |||| ||| ||||||| Sbjct: 89271 gaaaggcatgagctctttggaaagtggaggtcaagattttcaatggc 89225
>gb|AF153443.1|AF153443 Arabidopsis thaliana phytochrome A signal transduction 1 protein (PAT1) mRNA, complete cds Length = 1793 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 1441 agaatggtcaagagcctatcccctaaggtggtgactcttgttgagcaggagtcgaataca 1500 |||||||| |||||| |||| || ||||||||||||||||| || || ||||| || ||| Sbjct: 1165 agaatggtgaagagcttatctcccaaggtggtgactcttgtggaacaagagtcaaacaca 1224 Query: 1501 aac 1503 ||| Sbjct: 1225 aac 1227 Score = 52.0 bits (26), Expect = 0.009 Identities = 110/138 (79%) Strand = Plus / Plus Query: 1026 caagtttggttacatgtcagccaatggtgccatagcagaggctattaaaggcgagaactt 1085 ||||||||| ||||||||||| |||||||| || || ||||| || || | || ||| Sbjct: 750 caagtttggatacatgtcagcaaatggtgctattgctgaggcaatgaaggaagaaaacag 809 Query: 1086 gattcacatcattgatttccaaatcgcacaggggagccagtggataactataattcaggc 1145 ||||||| |||||||||||||||| || ||||| || ||| | ||| | || ||||| Sbjct: 810 agttcacattattgatttccaaatcggtcaagggagtcaatgggtcactcttatccaggc 869 Query: 1146 tcttgcagcgaggcctgg 1163 | ||||||| |||||||| Sbjct: 870 ttttgcagctaggcctgg 887
>emb|BX831005.1|CNS0A0O3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS48ZD10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1693 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 1441 agaatggtcaagagcctatcccctaaggtggtgactcttgttgagcaggagtcgaataca 1500 |||||||| |||||| |||| || ||||||||||||||||| || || ||||| || ||| Sbjct: 1177 agaatggtgaagagcttatctcccaaggtggtgactcttgtggaacaagagtcaaacaca 1236 Query: 1501 aac 1503 ||| Sbjct: 1237 aac 1239 Score = 48.1 bits (24), Expect = 0.14 Identities = 63/76 (82%) Strand = Plus / Plus Query: 1088 ttcacatcattgatttccaaatcgcacaggggagccagtggataactataattcaggctc 1147 ||||||| |||||||||||||||| || ||||| || ||| | ||| | || |||||| Sbjct: 824 ttcacattattgatttccaaatcggtcaagggagtcaatgggtcactcttatccaggctt 883 Query: 1148 ttgcagcgaggcctgg 1163 ||||||| |||||||| Sbjct: 884 ttgcagctaggcctgg 899
>emb|BX831686.1|CNS0A10E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH23ZG07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1756 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 1441 agaatggtcaagagcctatcccctaaggtggtgactcttgttgagcaggagtcgaataca 1500 |||||||| |||||| |||| || ||||||||||||||||| || || ||||| || ||| Sbjct: 1252 agaatggtgaagagcttatctcccaaggtggtgactcttgtggaacaagagtcaaacaca 1311 Query: 1501 aac 1503 ||| Sbjct: 1312 aac 1314 Score = 52.0 bits (26), Expect = 0.009 Identities = 110/138 (79%) Strand = Plus / Plus Query: 1026 caagtttggttacatgtcagccaatggtgccatagcagaggctattaaaggcgagaactt 1085 ||||||||| ||||||||||| |||||||| || || ||||| || || | || ||| Sbjct: 837 caagtttggatacatgtcagcaaatggtgctattgctgaggcaatgaaggaagaaaacag 896 Query: 1086 gattcacatcattgatttccaaatcgcacaggggagccagtggataactataattcaggc 1145 ||||||| |||||||||||||||| || ||||| || ||| | ||| | || ||||| Sbjct: 897 agttcacattattgatttccaaatcggtcaagggagtcaatgggtcactcttatccaggc 956 Query: 1146 tcttgcagcgaggcctgg 1163 | ||||||| |||||||| Sbjct: 957 ttttgcagctaggcctgg 974
>gb|DQ399829.1| Lycopersicon esculentum GRAS7 (GRAS7) mRNA, partial cds Length = 1340 Score = 50.1 bits (25), Expect = 0.035 Identities = 127/161 (78%) Strand = Plus / Plus Query: 1003 ctttgtgagatctgcccattctacaagtttggttacatgtcagccaatggtgccatagca 1062 |||| ||| ||||| |||| || ||||||||| || ||||||| |||||||| || | Sbjct: 228 ctttatgaaatctgtccatacttcaagtttggatatttgtcagcaaatggtgcaattgtt 287 Query: 1063 gaggctattaaaggcgagaacttgattcacatcattgatttccaaatcgcacaggggagc 1122 || || || |||| ||||||| ||||| || || |||||||| || || ||||| ||| Sbjct: 288 gatgccatgaaagatgagaactcaattcatataatcgatttccagattgctcagggtagc 347 Query: 1123 cagtggataactataattcaggctcttgcagcgaggcctgg 1163 |||||||| || |||| || ||||||||||| ||||||| Sbjct: 348 cagtggatcaccttaatccatgctcttgcagcacggcctgg 388
>gb|AC137079.9| Medicago truncatula clone mth2-27d17, complete sequence Length = 122392 Score = 46.1 bits (23), Expect = 0.54 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1462 cctaaggtggtgactcttgttgagcaggagtcgaatacaaacg 1504 |||||||| ||||||||||||||||| || || ||||| |||| Sbjct: 52130 cctaaggtagtgactcttgttgagcaagaatcaaataccaacg 52172 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 946 aaatccttgaaatgcaaagaaccta 970 |||||||||||||||||||| |||| Sbjct: 51602 aaatccttgaaatgcaaagagccta 51626
>emb|CR955006.2| Medicago truncatula chromosome 5 clone mth2-5i4, COMPLETE SEQUENCE Length = 108871 Score = 46.1 bits (23), Expect = 0.54 Identities = 38/43 (88%) Strand = Plus / Minus Query: 1445 tggtcaagagcctatcccctaaggtggtgactcttgttgagca 1487 |||| |||||||||||||| || || ||||| ||||||||||| Sbjct: 74579 tggttaagagcctatccccgaaagtcgtgacacttgttgagca 74537
>emb|AJ538575.1|NTA538575 Nicotiana tabacum cDNA-AFLP-fragment BC3-M24-001 Length = 445 Score = 46.1 bits (23), Expect = 0.54 Identities = 62/75 (82%) Strand = Plus / Plus Query: 1087 attcacatcattgatttccaaatcgcacaggggagccagtggataactataattcaggct 1146 ||||||||||| ||||||||||| || || |||| |||||||| ||| | |||| ||| Sbjct: 176 attcacatcatagatttccaaattgcgcaagggactcagtggatgactcttcttcaagct 235 Query: 1147 cttgcagcgaggcct 1161 ||||| || |||||| Sbjct: 236 cttgctgccaggcct 250 Score = 44.1 bits (22), Expect = 2.1 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1027 aagtttggttacatgtcagccaatggtgccatagcaga 1064 ||||||||||||||| | || |||||||| |||||||| Sbjct: 116 aagtttggttacatggctgcaaatggtgcaatagcaga 153
>emb|CT961058.16| M.truncatula DNA sequence from clone MTH2-80N17 on chromosome 3, complete sequence Length = 127385 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1462 cctaaggtggtgactcttgttgagca 1487 ||||||||||||||||| |||||||| Sbjct: 6237 cctaaggtggtgactctagttgagca 6212
>ref|NM_001066452.1| Oryza sativa (japonica cultivar-group) Os07g0545800 (Os07g0545800) mRNA, complete cds Length = 2161 Score = 44.1 bits (22), Expect = 2.1 Identities = 76/94 (80%) Strand = Plus / Plus Query: 1608 ggagcagcactgtgttgcaagggatatcgtcaacttaatcgcgtgtgagggtgcggaaag 1667 |||||||||||| | || | ||| ||||||||| | ||||| || ||||| ||| || Sbjct: 1594 ggagcagcactgcctcgccaaggacatcgtcaacatcatcgcctgcgaggggaaggacag 1653 Query: 1668 ggtggagaggcatgaggtgtttgggaaatggaag 1701 |||||||||||||||| || |||| || |||||| Sbjct: 1654 ggtggagaggcatgagctgcttggcaagtggaag 1687
>ref|XM_518038.2| PREDICTED: Pan troglodytes N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1, transcript variant 3 (NDST1), mRNA Length = 2372 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1662 ggaaagggtggagaggcatgag 1683 |||||||||||||||||||||| Sbjct: 2041 ggaaagggtggagaggcatgag 2062
>gb|M68929.1|MPOMTCG Marchantia polymorpha mitochondrion, complete genome Length = 186609 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 404 ggtcacagaaaattagctccaa 425 |||||||||||||||||||||| Sbjct: 134221 ggtcacagaaaattagctccaa 134242
>gb|AE006892.1| Sulfolobus solfataricus P2 section 251 of 272 of the complete genome Length = 10951 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 708 caacaatcctttgaaacaagat 729 |||||||||||||||||||||| Sbjct: 9182 caacaatcctttgaaacaagat 9161
>gb|AC147090.3| Pan troglodytes BAC clone RP43-58D11 from 7, complete sequence Length = 200913 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1178 taagaatcactggcatagatga 1199 |||||||||||||||||||||| Sbjct: 36233 taagaatcactggcatagatga 36212
>gb|AC074214.8| Homo sapiens BAC clone RP11-520A8 from 7, complete sequence Length = 43276 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1178 taagaatcactggcatagatga 1199 |||||||||||||||||||||| Sbjct: 21041 taagaatcactggcatagatga 21062
>gb|BC012888.1| Homo sapiens N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1, mRNA (cDNA clone MGC:9410 IMAGE:3882074), complete cds Length = 2248 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1662 ggaaagggtggagaggcatgag 1683 |||||||||||||||||||||| Sbjct: 1874 ggaaagggtggagaggcatgag 1895
>gb|AC142294.1| Pan troglodytes BAC clone RP43-73M4 from 7, complete sequence Length = 173444 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1178 taagaatcactggcatagatga 1199 |||||||||||||||||||||| Sbjct: 72170 taagaatcactggcatagatga 72149
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 2.1 Identities = 76/94 (80%) Strand = Plus / Plus Query: 1608 ggagcagcactgtgttgcaagggatatcgtcaacttaatcgcgtgtgagggtgcggaaag 1667 |||||||||||| | || | ||| ||||||||| | ||||| || ||||| ||| || Sbjct: 21565532 ggagcagcactgcctcgccaaggacatcgtcaacatcatcgcctgcgaggggaaggacag 21565591 Query: 1668 ggtggagaggcatgaggtgtttgggaaatggaag 1701 |||||||||||||||| || |||| || |||||| Sbjct: 21565592 ggtggagaggcatgagctgcttggcaagtggaag 21565625 Score = 42.1 bits (21), Expect = 8.5 Identities = 93/117 (79%) Strand = Plus / Plus Query: 952 ttgaaatgcaaagaacctacaagctctgagctcatgtcctacatgcatctcctttgtgag 1011 ||||||||||| ||||| | |||||||| || |||| |||||||| |||| | |||| Sbjct: 23599255 ttgaaatgcaaggaaccaaagagctctgaccttctgtcttacatgcacttcctgtatgag 23599314 Query: 1012 atctgcccattctacaagtttggttacatgtcagccaatggtgccatagcagaggct 1068 ||| || | || ||||||||| || ||||| || |||||||| || ||||||||| Sbjct: 23599315 gcctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggct 23599371
>gb|AC008472.8| Homo sapiens chromosome 5 clone CTC-367J11, complete sequence Length = 107733 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1662 ggaaagggtggagaggcatgag 1683 |||||||||||||||||||||| Sbjct: 96275 ggaaagggtggagaggcatgag 96296
>gb|AC011383.6| Homo sapiens chromosome 5 clone CTB-140J7, complete sequence Length = 93407 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1662 ggaaagggtggagaggcatgag 1683 |||||||||||||||||||||| Sbjct: 11281 ggaaagggtggagaggcatgag 11302
>dbj|AP004235.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0006G05 Length = 56865 Score = 44.1 bits (22), Expect = 2.1 Identities = 76/94 (80%) Strand = Plus / Plus Query: 1608 ggagcagcactgtgttgcaagggatatcgtcaacttaatcgcgtgtgagggtgcggaaag 1667 |||||||||||| | || | ||| ||||||||| | ||||| || ||||| ||| || Sbjct: 11906 ggagcagcactgcctcgccaaggacatcgtcaacatcatcgcctgcgaggggaaggacag 11965 Query: 1668 ggtggagaggcatgaggtgtttgggaaatggaag 1701 |||||||||||||||| || |||| || |||||| Sbjct: 11966 ggtggagaggcatgagctgcttggcaagtggaag 11999
>dbj|AP003838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1582_D10 Length = 103475 Score = 44.1 bits (22), Expect = 2.1 Identities = 76/94 (80%) Strand = Plus / Plus Query: 1608 ggagcagcactgtgttgcaagggatatcgtcaacttaatcgcgtgtgagggtgcggaaag 1667 |||||||||||| | || | ||| ||||||||| | ||||| || ||||| ||| || Sbjct: 103316 ggagcagcactgcctcgccaaggacatcgtcaacatcatcgcctgcgaggggaaggacag 103375 Query: 1668 ggtggagaggcatgaggtgtttgggaaatggaag 1701 |||||||||||||||| || |||| || |||||| Sbjct: 103376 ggtggagaggcatgagctgcttggcaagtggaag 103409
>emb|AL953856.8| Zebrafish DNA sequence from clone DKEY-43F9 in linkage group 21, complete sequence Length = 156667 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2047 tgtttaaataaatatgtttgta 2068 |||||||||||||||||||||| Sbjct: 6110 tgtttaaataaatatgtttgta 6089
>dbj|AK069266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012G08, full insert sequence Length = 2162 Score = 44.1 bits (22), Expect = 2.1 Identities = 76/94 (80%) Strand = Plus / Plus Query: 1608 ggagcagcactgtgttgcaagggatatcgtcaacttaatcgcgtgtgagggtgcggaaag 1667 |||||||||||| | || | ||| ||||||||| | ||||| || ||||| ||| || Sbjct: 1595 ggagcagcactgcctcgccaaggacatcgtcaacatcatcgcctgcgaggggaaggacag 1654 Query: 1668 ggtggagaggcatgaggtgtttgggaaatggaag 1701 |||||||||||||||| || |||| || |||||| Sbjct: 1655 ggtggagaggcatgagctgcttggcaagtggaag 1688
>gb|L36201.1|SSOMEMPROT Sulfolobus solfataricus membrane protein fragment Length = 1826 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 708 caacaatcctttgaaacaagat 729 |||||||||||||||||||||| Sbjct: 1422 caacaatcctttgaaacaagat 1401
>emb|CT831982.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109J20, full insert sequence Length = 2165 Score = 42.1 bits (21), Expect = 8.5 Identities = 93/117 (79%) Strand = Plus / Plus Query: 952 ttgaaatgcaaagaacctacaagctctgagctcatgtcctacatgcatctcctttgtgag 1011 ||||||||||| ||||| | |||||||| || |||| |||||||| |||| | |||| Sbjct: 1012 ttgaaatgcaaggaaccaaagagctctgaccttctgtcttacatgcacttcctgtatgag 1071 Query: 1012 atctgcccattctacaagtttggttacatgtcagccaatggtgccatagcagaggct 1068 ||| || | || ||||||||| || ||||| || |||||||| || ||||||||| Sbjct: 1072 gcctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggct 1128
>gb|AC188804.4| Gallus gallus BAC clone TAM31-1M3 from chromosome z, complete sequence Length = 157477 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1764 caaaacactactgaatagcta 1784 ||||||||||||||||||||| Sbjct: 37299 caaaacactactgaatagcta 37319
>dbj|AK241592.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065182P11, full insert sequence Length = 1184 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 tcctctccggcgccgccgctc 182 ||||||||||||||||||||| Sbjct: 206 tcctctccggcgccgccgctc 186
>gb|AC145241.3| Gorilla gorilla gorilla clone CH255-245G7, complete sequence Length = 169400 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1471 gtgactcttgttgagcaggag 1491 ||||||||||||||||||||| Sbjct: 106962 gtgactcttgttgagcaggag 106982
>ref|NM_001066650.1| Oryza sativa (japonica cultivar-group) Os07g0583600 (Os07g0583600) mRNA, complete cds Length = 2271 Score = 42.1 bits (21), Expect = 8.5 Identities = 93/117 (79%) Strand = Plus / Plus Query: 952 ttgaaatgcaaagaacctacaagctctgagctcatgtcctacatgcatctcctttgtgag 1011 ||||||||||| ||||| | |||||||| || |||| |||||||| |||| | |||| Sbjct: 1067 ttgaaatgcaaggaaccaaagagctctgaccttctgtcttacatgcacttcctgtatgag 1126 Query: 1012 atctgcccattctacaagtttggttacatgtcagccaatggtgccatagcagaggct 1068 ||| || | || ||||||||| || ||||| || |||||||| || ||||||||| Sbjct: 1127 gcctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggct 1183
>ref|NM_001062627.1| Oryza sativa (japonica cultivar-group) Os05g0524600 (Os05g0524600) mRNA, complete cds Length = 2661 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1820 tccttttccttggttggaaga 1840 ||||||||||||||||||||| Sbjct: 1941 tccttttccttggttggaaga 1921
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 gccgcatagatggcaggatca 214 ||||||||||||||||||||| Sbjct: 1339683 gccgcatagatggcaggatca 1339703
>gb|AC003953.1| Homo sapiens chromosome 9, P1 clone 8660 (LBNL H105), complete sequence Length = 75871 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 953 tgaaatgcaaagaacctacaa 973 ||||||||||||||||||||| Sbjct: 14841 tgaaatgcaaagaacctacaa 14861
>gb|AC138000.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0024M06, complete sequence Length = 51144 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 tcctctccggcgccgccgctc 182 ||||||||||||||||||||| Sbjct: 4543 tcctctccggcgccgccgctc 4563
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 tcctctccggcgccgccgctc 182 ||||||||||||||||||||| Sbjct: 105231 tcctctccggcgccgccgctc 105251
>gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0004D06, complete sequence Length = 157547 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1025 acaagtttggttacatgtcag 1045 ||||||||||||||||||||| Sbjct: 80014 acaagtttggttacatgtcag 80034 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1025 acaagtttggttacatgtcag 1045 ||||||||||||||||||||| Sbjct: 99037 acaagtttggttacatgtcag 99057
>gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0023F01, complete sequence Length = 145009 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1025 acaagtttggttacatgtcag 1045 ||||||||||||||||||||| Sbjct: 122586 acaagtttggttacatgtcag 122566
>gb|AC104041.5| Homo sapiens chromosome 15, clone CTD-2034I4, complete sequence Length = 188519 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2077 tgtagtgatcaaataaatatg 2097 ||||||||||||||||||||| Sbjct: 125694 tgtagtgatcaaataaatatg 125674
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 tcctctccggcgccgccgctc 182 ||||||||||||||||||||| Sbjct: 7711724 tcctctccggcgccgccgctc 7711704 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1025 acaagtttggttacatgtcag 1045 ||||||||||||||||||||| Sbjct: 26378984 acaagtttggttacatgtcag 26379004 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1025 acaagtttggttacatgtcag 1045 ||||||||||||||||||||| Sbjct: 26385909 acaagtttggttacatgtcag 26385929 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1025 acaagtttggttacatgtcag 1045 ||||||||||||||||||||| Sbjct: 26467134 acaagtttggttacatgtcag 26467154
>emb|CR450710.5| Zebrafish DNA sequence from clone CH211-197O6 in linkage group 2, complete sequence Length = 201624 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2087 aaataaatatgtttatagcta 2107 ||||||||||||||||||||| Sbjct: 94190 aaataaatatgtttatagcta 94210
>emb|AL391475.7| Human DNA sequence from clone RP11-33G16 on chromosome 9 Contains a novel gene, complete sequence Length = 163058 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 953 tgaaatgcaaagaacctacaa 973 ||||||||||||||||||||| Sbjct: 23131 tgaaatgcaaagaacctacaa 23151
>emb|BX569779.35| Zebrafish DNA sequence from clone CH211-113I9 in linkage group 11, complete sequence Length = 182464 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2047 tgtttaaataaatatgtttgt 2067 ||||||||||||||||||||| Sbjct: 104587 tgtttaaataaatatgtttgt 104567
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 579 ttcacccccaactgtttcatg 599 ||||||||||||||||||||| Sbjct: 2209421 ttcacccccaactgtttcatg 2209441
>emb|BX649590.15| Zebrafish DNA sequence from clone CH211-143I6 in linkage group 9, complete sequence Length = 120653 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1129 ataactataattcaggctctt 1149 ||||||||||||||||||||| Sbjct: 95416 ataactataattcaggctctt 95436
>gb|AY062210.1| Oryza sativa chitin-inducible gibberellin-responsive protein (GIGR2) mRNA, complete cds Length = 2157 Score = 42.1 bits (21), Expect = 8.5 Identities = 93/117 (79%) Strand = Plus / Plus Query: 952 ttgaaatgcaaagaacctacaagctctgagctcatgtcctacatgcatctcctttgtgag 1011 ||||||||||| ||||| | |||||||| || |||| |||||||| |||| | |||| Sbjct: 1009 ttgaaatgcaaggaaccaaagagctctgaccttctgtcttacatgcacttcctgtatgag 1068 Query: 1012 atctgcccattctacaagtttggttacatgtcagccaatggtgccatagcagaggct 1068 ||| || | || ||||||||| || ||||| || |||||||| || ||||||||| Sbjct: 1069 gcctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggct 1125
>gb|AY062209.1| Oryza sativa chitin-inducible gibberellin-responsive protein (CIGR1) mRNA, complete cds Length = 2104 Score = 42.1 bits (21), Expect = 8.5 Identities = 57/69 (82%) Strand = Plus / Plus Query: 1633 atcgtcaacttaatcgcgtgtgagggtgcggaaagggtggagaggcatgaggtgtttggg 1692 ||||||||| | ||||| || ||||| ||| |||||||||||||||||| || |||| Sbjct: 1613 atcgtcaacatcatcgcctgcgaggggaaggacagggtggagaggcatgagctgcttggc 1672 Query: 1693 aaatggaag 1701 || |||||| Sbjct: 1673 aagtggaag 1681
>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1127_E01 Length = 123787 Score = 42.1 bits (21), Expect = 8.5 Identities = 93/117 (79%) Strand = Plus / Plus Query: 952 ttgaaatgcaaagaacctacaagctctgagctcatgtcctacatgcatctcctttgtgag 1011 ||||||||||| ||||| | |||||||| || |||| |||||||| |||| | |||| Sbjct: 51696 ttgaaatgcaaggaaccaaagagctctgaccttctgtcttacatgcacttcctgtatgag 51755 Query: 1012 atctgcccattctacaagtttggttacatgtcagccaatggtgccatagcagaggct 1068 ||| || | || ||||||||| || ||||| || |||||||| || ||||||||| Sbjct: 51756 gcctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggct 51812
>dbj|AK122131.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133B20, full insert sequence Length = 2272 Score = 42.1 bits (21), Expect = 8.5 Identities = 93/117 (79%) Strand = Plus / Plus Query: 952 ttgaaatgcaaagaacctacaagctctgagctcatgtcctacatgcatctcctttgtgag 1011 ||||||||||| ||||| | |||||||| || |||| |||||||| |||| | |||| Sbjct: 1068 ttgaaatgcaaggaaccaaagagctctgaccttctgtcttacatgcacttcctgtatgag 1127 Query: 1012 atctgcccattctacaagtttggttacatgtcagccaatggtgccatagcagaggct 1068 ||| || | || ||||||||| || ||||| || |||||||| || ||||||||| Sbjct: 1128 gcctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggct 1184
>emb|CR353022.1| Gallus gallus finished cDNA, clone ChEST551d22 Length = 846 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 acacatcttcaggtgatgggt 406 ||||||||||||||||||||| Sbjct: 422 acacatcttcaggtgatgggt 442
>dbj|AK098890.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001M01, full insert sequence Length = 2224 Score = 42.1 bits (21), Expect = 8.5 Identities = 93/117 (79%) Strand = Plus / Plus Query: 952 ttgaaatgcaaagaacctacaagctctgagctcatgtcctacatgcatctcctttgtgag 1011 ||||||||||| ||||| | |||||||| || |||| |||||||| |||| | |||| Sbjct: 1020 ttgaaatgcaaggaaccaaagagctctgaccttctgtcttacatgcacttcctgtatgag 1079 Query: 1012 atctgcccattctacaagtttggttacatgtcagccaatggtgccatagcagaggct 1068 ||| || | || ||||||||| || ||||| || |||||||| || ||||||||| Sbjct: 1080 gcctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggct 1136
>dbj|AK073470.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044I02, full insert sequence Length = 2234 Score = 42.1 bits (21), Expect = 8.5 Identities = 93/117 (79%) Strand = Plus / Plus Query: 952 ttgaaatgcaaagaacctacaagctctgagctcatgtcctacatgcatctcctttgtgag 1011 ||||||||||| ||||| | |||||||| || |||| |||||||| |||| | |||| Sbjct: 1020 ttgaaatgcaaggaaccaaagagctctgaccttctgtcttacatgcacttcctgtatgag 1079 Query: 1012 atctgcccattctacaagtttggttacatgtcagccaatggtgccatagcagaggct 1068 ||| || | || ||||||||| || ||||| || |||||||| || ||||||||| Sbjct: 1080 gcctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggct 1136
>dbj|AK061928.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-C06, full insert sequence Length = 1343 Score = 42.1 bits (21), Expect = 8.5 Identities = 93/117 (79%) Strand = Plus / Plus Query: 952 ttgaaatgcaaagaacctacaagctctgagctcatgtcctacatgcatctcctttgtgag 1011 ||||||||||| ||||| | |||||||| || |||| |||||||| |||| | |||| Sbjct: 106 ttgaaatgcaaggaaccaaagagctctgaccttctgtcttacatgcacttcctgtatgag 165 Query: 1012 atctgcccattctacaagtttggttacatgtcagccaatggtgccatagcagaggct 1068 ||| || | || ||||||||| || ||||| || |||||||| || ||||||||| Sbjct: 166 gcctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggct 222
>ref|XM_722587.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY06921) partial mRNA Length = 1206 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2143 gattgacatgctgtaatatac 2163 ||||||||||||||||||||| Sbjct: 175 gattgacatgctgtaatatac 155
>gb|AC005276.1|AC005276 Homo sapiens clone fragment UWGC:gap3 from 7q31.3, complete sequence Length = 16168 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1222 ggtggtggactggatatggtt 1242 ||||||||||||||||||||| Sbjct: 13695 ggtggtggactggatatggtt 13675 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 376,637,675 Number of extensions: 19738695 Number of successful extensions: 98512 Number of sequences better than 10.0: 80 Number of HSP's gapped: 98500 Number of HSP's successfully gapped: 155 Length of query: 2219 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2196 Effective length of database: 18,503,978,556 Effective search space: 40634736908976 Effective search space used: 40634736908976 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
