ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf162l01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK061231:Os05g0186000 | 95 | 3e-20 | 2 | AK060420:Os05g0186000 | 95 | 3e-20 | 3 | AK058675:Os05g0186000 | 86 | 1e-17 | 4 | Os07g0108200:Os07g0108200 | 32 | 0.38 | 5 | Os10g0508300:Os10g0508300 | 30 | 0.83 | 6 | Os12g0515500:Os12g0515500 | 29 | 1.9 | 7 | AK101322:Os02g0139300 | 29 | 1.9 | 8 | AK072088:Os02g0139300 | 29 | 1.9 | 9 | AK108047:Os11g0231400 | 29 | 2.4 | 10 | AK104052: | 28 | 3.2 | 11 | AK073887: | 28 | 3.2 | 12 | AK109917:Os01g0588000 | 28 | 4.1 | 13 | AK120246:Os05g0135500 | 28 | 5.4 | 14 | AK106200:Os05g0135500 | 28 | 5.4 | 15 | AK104641:Os05g0135500 | 28 | 5.4 | 16 | AK104300:Os05g0135500 | 28 | 5.4 | 17 | AK104219:Os05g0135500 | 28 | 5.4 | 18 | AK061553:Os05g0135500 | 28 | 5.4 | 19 | AK060998:Os05g0135500 | 28 | 5.4 | 20 | AK059096:Os09g0528100 | 28 | 5.4 | 21 | Os06g0284500:Os06g0284500 | 27 | 7.0 | 22 | Os04g0413000:Os04g0413000 | 27 | 7.0 | 23 | AK110228: | 27 | 7.0 | 24 | AK111045:Os06g0686800 | 27 | 7.0 | 25 | AK109877:Os03g0391300 | 27 | 7.1 | 26 | AK121206:Os02g0559300 | 27 | 9.1 | 27 | AK105765:Os10g0554200 | 27 | 9.1 | 28 | AK100088:Os02g0559300 | 27 | 9.1 | 29 | AK068409:Os10g0554200 | 27 | 9.1 | 30 | AK066544:Os07g0102100 | 27 | 9.1 | 31 | AK110516: | 27 | 9.2 |
|---|
>AK061231:Os05g0186000 | Length = 126 Score = 95.1 bits (235), Expect = 3e-20 Identities = 58/111 (52%), Positives = 64/111 (57%), Gaps = 4/111 (3%) Frame = +2 Query: 59 MALLAVQGMAMSTAAFPS-HHHGAVSSFSFGLSATVSFCRSARSLAATA---VSAPPTSV 226 MALLAV MA S A FPS HHH AVSS+ L A +F RS +AA A +SAP T V Sbjct: 1 MALLAVHAMAASPATFPSSHHHAAVSSYC-ALPAAAAFSRSRSRVAAAAAATLSAPLTPV 59 Query: 227 LDVYCXXXXXXXXXXXXFSHSYGNARPRNKKKGTGXXXXXXXXXXXXKDQF 379 L+VYC F+HSYGNARPRNKKKGTG KDQF Sbjct: 60 LEVYCGRGDKKTKRGKRFNHSYGNARPRNKKKGTGPARLFAPPAPPRKDQF 110
>AK060420:Os05g0186000 | Length = 126 Score = 95.1 bits (235), Expect = 3e-20 Identities = 58/111 (52%), Positives = 64/111 (57%), Gaps = 4/111 (3%) Frame = +2 Query: 59 MALLAVQGMAMSTAAFPS-HHHGAVSSFSFGLSATVSFCRSARSLAATA---VSAPPTSV 226 MALLAV MA S A FPS HHH AVSS+ L A +F RS +AA A +SAP T V Sbjct: 1 MALLAVHAMAASPATFPSSHHHAAVSSYC-ALPAAAAFSRSRSRVAAAAAATLSAPLTPV 59 Query: 227 LDVYCXXXXXXXXXXXXFSHSYGNARPRNKKKGTGXXXXXXXXXXXXKDQF 379 L+VYC F+HSYGNARPRNKKKGTG KDQF Sbjct: 60 LEVYCGRGDKKTKRGKRFNHSYGNARPRNKKKGTGPARLFAPPAPPRKDQF 110
>AK058675:Os05g0186000 | Length = 138 Score = 86.3 bits (212), Expect = 1e-17 Identities = 58/123 (47%), Positives = 64/123 (52%), Gaps = 16/123 (13%) Frame = +2 Query: 59 MALLAVQGMAMSTAAFP-SHHHGAVSSFSFGLSATVSFCRSARSLAATA---VSAPPTSV 226 MALLAV MA S A FP SHHH AVSS+ L A +F RS +AA A +SAP T V Sbjct: 1 MALLAVHAMAASPATFPSSHHHAAVSSYC-ALPAAAAFSRSRSRVAAAAAATLSAPLTPV 59 Query: 227 LDVYCXXXXXXXXXXXXFSHSYGN------------ARPRNKKKGTGXXXXXXXXXXXXK 370 L+VYC F+HSYGN ARPRNKKKGTG K Sbjct: 60 LEVYCGRGDKKTKRGKRFNHSYGNTCHLLTAVCSSQARPRNKKKGTGPARLFAPPAPPRK 119 Query: 371 DQF 379 DQF Sbjct: 120 DQF 122
>Os07g0108200:Os07g0108200 | Length = 568 Score = 31.6 bits (70), Expect = 0.38 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Frame = -1 Query: 228 RTDVGGAETAVAARLLAERQNDTVAESPKEKEDTAPWWWEGKAA---VDMAMPWTARS 64 R +GG E AVAA LL ++Q+ + + + WW+G+ A + A P A S Sbjct: 53 RVKMGGDERAVAAPLLQQQQDGGGGDGERRRRRWWWGWWDGEEAAGQLAFAAPMVATS 110
>Os10g0508300:Os10g0508300 | Length = 310 Score = 30.4 bits (67), Expect = 0.83 Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 15/56 (26%) Frame = +2 Query: 101 AFPSHHHGAVSSFSF---------------GLSATVSFCRSARSLAATAVSAPPTS 223 A P HHH + S GL A+ + CR+ S AA A PPTS Sbjct: 136 ANPPHHHSLLDEISTANSPTQLLLEQHGLGGLMASAASCRNNNSPAAAAAPPPPTS 191
>Os12g0515500:Os12g0515500 | Length = 619 Score = 29.3 bits (64), Expect = 1.9 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 7/47 (14%) Frame = -1 Query: 216 GGAETAVAARLLAERQNDT-------VAESPKEKEDTAPWWWEGKAA 97 GGAE AV+ARLL +D +A P ++ APW+ + A Sbjct: 5 GGAEAAVSARLLELAADDNAAGLGELLAAWPSLADEPAPWYTPARGA 51
>AK101322:Os02g0139300 | Length = 489 Score = 29.3 bits (64), Expect = 1.9 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 120 WWWEGKAAVDMAMPWTARSAIGGSREECVGLVW 22 WWW G+AA +A W +A E +G W Sbjct: 5 WWWHGRAAAAVAC-WVWLAAAAAVGVEAIGANW 36
>AK072088:Os02g0139300 | Length = 489 Score = 29.3 bits (64), Expect = 1.9 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 120 WWWEGKAAVDMAMPWTARSAIGGSREECVGLVW 22 WWW G+AA +A W +A E +G W Sbjct: 5 WWWHGRAAAAVAC-WVWLAAAAAVGVEAIGANW 36
>AK108047:Os11g0231400 | Length = 372 Score = 28.9 bits (63), Expect = 2.4 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 6/61 (9%) Frame = -3 Query: 442 ILIHSLHDVIINL------NCDDLPVFKLILPWRRWRGVKPCWACSLLLVTGPCISI*VA 281 +L+ HD I L + +LP + +LP R R W CSL + G CIS+ V Sbjct: 74 LLLQRDHDTAIRLLHPFTGDTAELPPLETLLPRVRCRSEVSRW-CSLRNICGACISVGVG 132 Query: 280 E 278 + Sbjct: 133 D 133
>AK104052: | Length = 191 Score = 28.5 bits (62), Expect = 3.2 Identities = 18/60 (30%), Positives = 31/60 (51%) Frame = +1 Query: 187 PRRHRRLGSSHISS*CLLWKRGQKDKERQKVQPLIWKCTAP*QEEGNRPSTALRPSSASK 366 PRR+RR ++ L ++ +RQ+V P+I C +P + EG+ T+ P A + Sbjct: 72 PRRNRRTRRQPVAVVDLEVDASREGNKRQRVAPVI-HCLSPERGEGSSLKTSNEPPKAKE 130
>AK073887: | Length = 191 Score = 28.5 bits (62), Expect = 3.2 Identities = 18/60 (30%), Positives = 31/60 (51%) Frame = +1 Query: 187 PRRHRRLGSSHISS*CLLWKRGQKDKERQKVQPLIWKCTAP*QEEGNRPSTALRPSSASK 366 PRR+RR ++ L ++ +RQ+V P+I C +P + EG+ T+ P A + Sbjct: 72 PRRNRRTRRQPVAVVDLEVDASREGNKRQRVAPVI-HCLSPERGEGSSLKTSNEPPKAKE 130
>AK109917:Os01g0588000 | Length = 269 Score = 28.1 bits (61), Expect = 4.1 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Frame = -1 Query: 201 AVAARLLAERQNDTVAESPK-EKEDTAPWWWEGKAAVDMAMPWTARSAIGGSRE 43 A ARL A++ A +P E E TA WW E A M + AIG ++E Sbjct: 196 AARARLAAQQAASRPAPAPAPEPEKTAAWWKERAAEEGMKL----AEAIGKNKE 245
>AK120246:Os05g0135500 | Length = 344 Score = 27.7 bits (60), Expect = 5.4 Identities = 19/61 (31%), Positives = 27/61 (44%) Frame = +2 Query: 26 TNPTHSSLLPPMALLAVQGMAMSTAAFPSHHHGAVSSFSFGLSATVSFCRSARSLAATAV 205 ++P SSL PMA A+ GM M ++ P A S G A C A ++ V Sbjct: 4 SSPAPSSLHVPMAAAALLGMLMMMSSAPEMKVEAAGGLSVGFYA--ESCPKAEAIVRDTV 61 Query: 206 S 208 + Sbjct: 62 T 62
>AK106200:Os05g0135500 | Length = 344 Score = 27.7 bits (60), Expect = 5.4 Identities = 19/61 (31%), Positives = 27/61 (44%) Frame = +2 Query: 26 TNPTHSSLLPPMALLAVQGMAMSTAAFPSHHHGAVSSFSFGLSATVSFCRSARSLAATAV 205 ++P SSL PMA A+ GM M ++ P A S G A C A ++ V Sbjct: 4 SSPAPSSLHVPMAAAALLGMLMMMSSAPEMKVEAAGGLSVGFYA--ESCPKAEAIVRDTV 61 Query: 206 S 208 + Sbjct: 62 T 62
>AK104641:Os05g0135500 | Length = 344 Score = 27.7 bits (60), Expect = 5.4 Identities = 19/61 (31%), Positives = 27/61 (44%) Frame = +2 Query: 26 TNPTHSSLLPPMALLAVQGMAMSTAAFPSHHHGAVSSFSFGLSATVSFCRSARSLAATAV 205 ++P SSL PMA A+ GM M ++ P A S G A C A ++ V Sbjct: 4 SSPAPSSLHVPMAAAALLGMLMMMSSAPEMKVEAAGGLSVGFYA--ESCPKAEAIVRDTV 61 Query: 206 S 208 + Sbjct: 62 T 62
>AK104300:Os05g0135500 | Length = 344 Score = 27.7 bits (60), Expect = 5.4 Identities = 19/61 (31%), Positives = 27/61 (44%) Frame = +2 Query: 26 TNPTHSSLLPPMALLAVQGMAMSTAAFPSHHHGAVSSFSFGLSATVSFCRSARSLAATAV 205 ++P SSL PMA A+ GM M ++ P A S G A C A ++ V Sbjct: 4 SSPAPSSLHVPMAAAALLGMLMMMSSAPEMKVEAAGGLSVGFYA--ESCPKAEAIVRDTV 61 Query: 206 S 208 + Sbjct: 62 T 62
>AK104219:Os05g0135500 | Length = 344 Score = 27.7 bits (60), Expect = 5.4 Identities = 19/61 (31%), Positives = 27/61 (44%) Frame = +2 Query: 26 TNPTHSSLLPPMALLAVQGMAMSTAAFPSHHHGAVSSFSFGLSATVSFCRSARSLAATAV 205 ++P SSL PMA A+ GM M ++ P A S G A C A ++ V Sbjct: 4 SSPAPSSLHVPMAAAALLGMLMMMSSAPEMKVEAAGGLSVGFYA--ESCPKAEAIVRDTV 61 Query: 206 S 208 + Sbjct: 62 T 62
>AK061553:Os05g0135500 | Length = 344 Score = 27.7 bits (60), Expect = 5.4 Identities = 19/61 (31%), Positives = 27/61 (44%) Frame = +2 Query: 26 TNPTHSSLLPPMALLAVQGMAMSTAAFPSHHHGAVSSFSFGLSATVSFCRSARSLAATAV 205 ++P SSL PMA A+ GM M ++ P A S G A C A ++ V Sbjct: 4 SSPAPSSLHVPMAAAALLGMLMMMSSAPEMKVEAAGGLSVGFYA--ESCPKAEAIVRDTV 61 Query: 206 S 208 + Sbjct: 62 T 62
>AK060998:Os05g0135500 | Length = 344 Score = 27.7 bits (60), Expect = 5.4 Identities = 19/61 (31%), Positives = 27/61 (44%) Frame = +2 Query: 26 TNPTHSSLLPPMALLAVQGMAMSTAAFPSHHHGAVSSFSFGLSATVSFCRSARSLAATAV 205 ++P SSL PMA A+ GM M ++ P A S G A C A ++ V Sbjct: 4 SSPAPSSLHVPMAAAALLGMLMMMSSAPEMKVEAAGGLSVGFYA--ESCPKAEAIVRDTV 61 Query: 206 S 208 + Sbjct: 62 T 62
>AK059096:Os09g0528100 | Length = 82 Score = 27.7 bits (60), Expect = 5.4 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = +2 Query: 149 LSATVSFCRSARSLAATAVSAPPTSVLDVYCXXXXXXXXXXXXFSHSYGNARPRNKKK 322 L+A +F R +SA +V C F SYGNARP+ +KK Sbjct: 5 LAAAAAFVRRLVPARNPVISAEAEAVT---CGRGDKKTKRGKRFKGSYGNARPKREKK 59
>Os06g0284500:Os06g0284500 | Length = 289 Score = 27.3 bits (59), Expect = 7.0 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 13/80 (16%) Frame = +2 Query: 32 PTHSSLLPPMALLAVQGMAM-------STAAFPSHHHGAVSSFS-FGLSATVSFCRSARS 187 P S LP A Q A + AA H + +SF+ +S + RS+ Sbjct: 178 PPPSQALPAFASFTAQPKAEEDVADAPALAATEQHRSSSAASFAAHSISPPFAAARSSDG 237 Query: 188 LAATAVSA-----PPTSVLD 232 AA A +A PPT+VLD Sbjct: 238 PAAAAAAAAADWAPPTAVLD 257
>Os04g0413000:Os04g0413000 | Length = 682 Score = 27.3 bits (59), Expect = 7.0 Identities = 21/61 (34%), Positives = 29/61 (47%) Frame = +2 Query: 38 HSSLLPPMALLAVQGMAMSTAAFPSHHHGAVSSFSFGLSATVSFCRSARSLAATAVSAPP 217 H+SLLP A L AM+T H +SS + L+ VS R S+ A ++ P Sbjct: 41 HASLLPHGAALRALATAMATPT--PMPHTPISSQTLTLAPHVSRRRCGGSVRARTLALPA 98 Query: 218 T 220 T Sbjct: 99 T 99
>AK110228: | Length = 1551 Score = 27.3 bits (59), Expect = 7.0 Identities = 20/58 (34%), Positives = 24/58 (41%) Frame = +2 Query: 41 SSLLPPMALLAVQGMAMSTAAFPSHHHGAVSSFSFGLSATVSFCRSARSLAATAVSAP 214 SS P A A S+AA A SF+FG S S + S A + SAP Sbjct: 876 SSAAPSFGFGAAPSSAASSAA-------AAPSFAFGASTAASSAAAESSSTAASTSAP 926
>AK111045:Os06g0686800 | Length = 93 Score = 27.3 bits (59), Expect = 7.0 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = +3 Query: 240 VEEGTERQREAKGSATHMEMHGPVTRRREQAQHGFTPLQ-RLQGRISLKTGR 392 V+ R+R A HGP +R+++ QH ++ + LQ R++ GR Sbjct: 31 VQHRRHRRRRPPRHARRGAHHGPQQQRQQRLQHSYSYINTTLQQRLNTYAGR 82
>AK109877:Os03g0391300 | Length = 667 Score = 27.3 bits (59), Expect = 7.1 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%) Frame = -1 Query: 108 GKAAVDMAM---PWTARSAIGGSREECVGLVWICEV 10 G+ A+D A+ PW R A+G R VGLV + V Sbjct: 262 GRGALDAAVDVVPWLPRPALGDGRAGEVGLVEVAAV 297
>AK121206:Os02g0559300 | Length = 729 Score = 26.9 bits (58), Expect = 9.1 Identities = 9/27 (33%), Positives = 17/27 (62%) Frame = +2 Query: 41 SSLLPPMALLAVQGMAMSTAAFPSHHH 121 ++ +PP+ ++ + STA P+HHH Sbjct: 81 AAAVPPVVVITSLNKSYSTAGAPAHHH 107
>AK105765:Os10g0554200 | Length = 465 Score = 26.9 bits (58), Expect = 9.1 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +3 Query: 306 PVTRRREQAQHGFTPLQRLQGRISL 380 PV RR HG TPLQR+ +SL Sbjct: 281 PVARRATANPHGLTPLQRVFVGLSL 305
>AK100088:Os02g0559300 | Length = 725 Score = 26.9 bits (58), Expect = 9.1 Identities = 9/27 (33%), Positives = 17/27 (62%) Frame = +2 Query: 41 SSLLPPMALLAVQGMAMSTAAFPSHHH 121 ++ +PP+ ++ + STA P+HHH Sbjct: 81 AAAVPPVVVITSLNKSYSTAGAPAHHH 107
>AK068409:Os10g0554200 | Length = 596 Score = 26.9 bits (58), Expect = 9.1 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +3 Query: 306 PVTRRREQAQHGFTPLQRLQGRISL 380 PV RR HG TPLQR+ +SL Sbjct: 412 PVARRATANPHGLTPLQRVFVGLSL 436
>AK066544:Os07g0102100 | Length = 808 Score = 26.9 bits (58), Expect = 9.1 Identities = 22/72 (30%), Positives = 33/72 (45%) Frame = +2 Query: 5 SHTSQIHTNPTHSSLLPPMALLAVQGMAMSTAAFPSHHHGAVSSFSFGLSATVSFCRSAR 184 S +S + P HS+ PP + A S+A+ PS + SS S++ S SA Sbjct: 20 SASSTATSAPPHSTSTPPPSTAASATPTTSSASSPSSSTASSSS----PSSSTSTSPSAP 75 Query: 185 SLAATAVSAPPT 220 + TA +P T Sbjct: 76 TTTETAALSPST 87
>AK110516: | Length = 1175 Score = 26.9 bits (58), Expect = 9.2 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Frame = -1 Query: 147 PKEKEDTAPWWWEG--KAAVDMAMPWTARSAIGGSREECVG 31 PK ++ W ++G + PW + +A G S E C+G Sbjct: 529 PKPVQNVGDWTYQGCISDTNGLVFPWKSVNATGNSPEWCLG 569 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,521,185 Number of extensions: 345368 Number of successful extensions: 1195 Number of sequences better than 10.0: 31 Number of HSP's gapped: 1183 Number of HSP's successfully gapped: 31 Length of query: 188 Length of database: 15,399,855 Length adjustment: 95 Effective length of query: 93 Effective length of database: 11,595,960 Effective search space: 1078424280 Effective search space used: 1078424280 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
