No.
Definition
Score (bits)
E Value
1 emb|CR855041.1| Oryza sativa genomic DNA, chromosome 4, BAC clon...
204
8e-49
2 ref|NM_001058712.1| Oryza sativa (japonica cultivar-group) Os04g...
198
5e-47
3 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...
198
5e-47
4 emb|AL662936.4|OSJN00137 Oryza sativa genomic DNA, chromosome 4,...
198
5e-47
5 dbj|AK071546.1| Oryza sativa (japonica cultivar-group) cDNA clon...
198
5e-47
6 emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4,...
198
5e-47
7 ref|NM_001058707.1| Oryza sativa (japonica cultivar-group) Os04g...
184
7e-43
8 dbj|AK071864.1| Oryza sativa (japonica cultivar-group) cDNA clon...
184
7e-43
9 gb|AF029857.1|AF029857 Sorghum bicolor cytochrome P450 CYP99A1 (...
170
1e-38
10 emb|CR855057.1| Oryza sativa genomic DNA, chromosome 4, BAC clon...
139
4e-29
11 gb|AF321864.1|AF321864 Lolium rigidum clone Lol-5-v putative cyt...
101
8e-18
12 ref|NM_001057877.1| Oryza sativa (japonica cultivar-group) Os03g...
58
1e-04
13 gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genom...
58
1e-04
14 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
58
1e-04
15 gb|AF321856.1|AF321856 Lolium rigidum clone FHH-t putative cytoc...
58
1e-04
16 gb|DQ341412.1| Oryza sativa (indica cultivar-group) bentazon and...
58
1e-04
17 dbj|AK104825.1| Oryza sativa (japonica cultivar-group) cDNA clon...
58
1e-04
18 dbj|AK066760.1| Oryza sativa (japonica cultivar-group) cDNA clon...
58
1e-04
19 gb|AF321863.1|AF321863 Lolium rigidum clone Lol-3-k putative cyt...
56
4e-04
20 dbj|AB159039.1| Lolium rigidum mRNA for P450, complete cds, clon...
56
4e-04
21 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
50
0.027
22 gb|AF321855.1|AF321855 Lolium rigidum clone FHH-v putative cytoc...
50
0.027
23 dbj|AP005719.3| Oryza sativa (japonica cultivar-group) genomic D...
50
0.027
24 dbj|AB159038.1| Lolium rigidum mRNA for P450, complete cds, clon...
50
0.027
25 dbj|AB159037.1| Lolium rigidum mRNA for P450, complete cds, clon...
50
0.027
26 dbj|AP005160.3| Oryza sativa (japonica cultivar-group) genomic D...
50
0.027
27 ref|NM_001069821.1| Oryza sativa (japonica cultivar-group) Os09g...
48
0.11
28 ref|NM_001069820.1| Oryza sativa (japonica cultivar-group) Os09g...
48
0.11
29 ref|NM_001069819.1| Oryza sativa (japonica cultivar-group) Os09g...
48
0.11
30 ref|NM_001068726.1| Oryza sativa (japonica cultivar-group) Os08g...
48
0.11
31 ref|NM_001067321.1| Oryza sativa (japonica cultivar-group) Os08g...
48
0.11
32 ref|NM_001067320.1| Oryza sativa (japonica cultivar-group) Os08g...
48
0.11
33 ref|NM_001061843.1| Oryza sativa (japonica cultivar-group) Os05g...
48
0.11
34 ref|NM_001057319.1| Oryza sativa (japonica cultivar-group) Os03g...
48
0.11
35 gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome...
48
0.11
36 gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome...
48
0.11
37 gb|AY072299.1| Zea mays cytochrome P450 monooxygenase CYP71C3v2 ...
48
0.11
38 gb|AY072298.1| Zea mays cytochrome P450 monooxygenase CYP71C3v2 ...
48
0.11
39 gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome...
48
0.11
40 gb|AF488521.1| Oryza sativa Cyt-P450 monooxygenase (PM-I) mRNA, ...
48
0.11
41 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...
48
0.11
42 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...
48
0.11
43 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...
48
0.11
44 gb|AF321857.1|AF321857 Lolium rigidum clone FHH-y putative cytoc...
48
0.11
45 dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ...
48
0.11
46 dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic D...
48
0.11
47 dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic D...
48
0.11
48 dbj|AP005254.3| Oryza sativa (japonica cultivar-group) genomic D...
48
0.11
49 dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic D...
48
0.11
50 dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic D...
48
0.11
51 dbj|AK111616.1| Oryza sativa (japonica cultivar-group) cDNA clon...
48
0.11
52 dbj|AK107584.1| Oryza sativa (japonica cultivar-group) cDNA clon...
48
0.11
53 dbj|AK100321.1| Oryza sativa (japonica cultivar-group) cDNA clon...
48
0.11
54 emb|Y11403.1|ZMCI31AC3 Z.mays cyp71c3 gene
48
0.11
55 emb|X81830.1|ZMCYP71C3 Z.mays CYP71C3 mRNA for cytochrome P-450
48
0.11
56 gb|AY103613.1| Zea mays PCO142958 mRNA sequence
48
0.11
57 emb|CT835295.1| Oryza sativa (indica cultivar-group) cDNA clone:...
46
0.42
58 ref|NM_001064708.1| Oryza sativa (japonica cultivar-group) Os06g...
46
0.42
59 ref|NM_001052176.1| Oryza sativa (japonica cultivar-group) Os02g...
46
0.42
60 gb|AF047659.1| Caenorhabditis elegans cosmid K07H8, complete seq...
46
0.42
61 ref|NM_068990.2| Caenorhabditis elegans K07H8.10 (K07H8.10) mRNA...
46
0.42
62 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...
46
0.42
63 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
46
0.42
64 gb|AC009334.8| Homo sapiens chromosome 1, clone RP11-45L2, compl...
46
0.42
65 emb|AL121997.7|HSJ1043F6 Human DNA sequence from clone RP5-1043F...
46
0.42
66 dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic D...
46
0.42
67 dbj|AP004769.3| Oryza sativa (japonica cultivar-group) genomic D...
46
0.42
68 dbj|AK099951.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.42
69 ref|XM_001186213.1| PREDICTED: Strongylocentrotus purpuratus sim...
44
1.6
70 ref|XM_777911.2| PREDICTED: Strongylocentrotus purpuratus simila...
44
1.6
71 ref|NM_001071588.1| Oryza sativa (japonica cultivar-group) Os10g...
44
1.6
72 dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp...
44
1.6
73 dbj|AB124857.1| Triticum aestivum CYP71C8v3 mRNA for P450, compl...
44
1.6
74 dbj|AK138881.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu...
44
1.6
75 gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 gen...
44
1.6
76 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...
44
1.6
77 emb|CR555306.1| Azoarcus sp. EbN1 complete genome
44
1.6
78 emb|AL604066.9| Mouse DNA sequence from clone RP23-174M12 on chr...
44
1.6
79 dbj|AB042629.1| Triticum aestivum CYP71C8v2 mRNA for P450, compl...
44
1.6
80 dbj|AK105694.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
1.6
81 emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
44
1.6
82 gb|AC140304.3| Mus musculus BAC clone RP23-386K4 from 15, comple...
44
1.6
83 gb|AC127428.42| Medicago truncatula clone mth2-36c19, complete s...
42
6.5
84 emb|CT830689.1| Oryza sativa (indica cultivar-group) cDNA clone:...
42
6.5
85 emb|CT835106.1| Oryza sativa (indica cultivar-group) cDNA clone:...
42
6.5
86 emb|CT833523.1| Oryza sativa (indica cultivar-group) cDNA clone:...
42
6.5
87 dbj|AK241300.1| Oryza sativa (japonica cultivar-group) cDNA, clo...
42
6.5
88 ref|NM_001064243.1| Oryza sativa (japonica cultivar-group) Os06g...
42
6.5
89 ref|NM_001058439.1| Oryza sativa (japonica cultivar-group) Os03g...
42
6.5
90 ref|NM_001052860.1| Oryza sativa (japonica cultivar-group) Os02g...
42
6.5
91 gb|AC170599.2| Mus musculus BAC clone RP23-369P2 from chromosome...
42
6.5
92 gb|AC118192.13| Mus musculus chromosome 1, clone RP23-200C17, co...
42
6.5
93 gb|AC020895.8| Homo sapiens chromosome 19 clone CTC-312O10, comp...
42
6.5
94 gb|AY989887.1| Hordeum vulgare subsp. vulgare cytochrome P450 mo...
42
6.5
95 gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genom...
42
6.5
96 dbj|AP004684.3| Oryza sativa (japonica cultivar-group) genomic D...
42
6.5
97 dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic D...
42
6.5
98 gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genom...
42
6.5
99 dbj|AP005826.3| Oryza sativa (japonica cultivar-group) genomic D...
42
6.5
100 dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic D...
42
6.5
101 dbj|AK122138.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
6.5
102 dbj|AK122077.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
6.5
103 emb|CR406766.1| Gallus gallus finished cDNA, clone ChEST989d9
42
6.5
104 emb|BX322622.10| Zebrafish DNA sequence from clone DKEYP-14D3 in...
42
6.5
105 dbj|AK064029.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
6.5
106 emb|AJ495774.1|HVU495774 Hordeum vulgare partial mRNA for putati...
42
6.5
107 emb|BX088532.7| Zebrafish DNA sequence from clone CH211-127E17 i...
42
6.5
108 emb|Y11404.1|ZMCI31AC2 Z.mays cyp71c2 gene
42
6.5
109 emb|X81829.1|ZMCYP71C2 Z.mays CYP71C2 mRNA for cytochrome P-450
42
6.5
110 gb|AC102243.14| Mus musculus chromosome 18, clone RP24-141G8, co...
42
6.5
111 gb|AY109508.1| Zea mays CL1574_1 mRNA sequence
42
6.5
112 gb|AC163389.2| Mus musculus chromosome 1, clone RP23-397E23, com...
42
6.5
113 gb|AC163663.3| Mus musculus BAC clone RP24-241H23 from chromosom...
42
6.5
>emb|CR855041.1 | Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0105N24,
complete sequence
Length = 90501
Score = 204 bits (103), Expect = 8e-49
Identities = 262/315 (83%)
Strand = Plus / Plus
Query: 161 gcctccaggcccatggcgcctccccttgatcggaagcctccaccacgtcctcacgtcgca 220
||||||||| |||||| ||||||||||||||| |||||| |||| ||||| ||||||
Sbjct: 45752 gcctccagggccatggaacctccccttgatcggcggcctcctccacctcctccggtcgca 45811
Query: 221 gccgcaggtcgccctccgggacctggccaagaagcacggccctgtcatgtacctccggtt 280
||||||||||| ||||| || || |||| ||| ||||||| || |||| ||||||| |
Sbjct: 45812 tccgcaggtcgcgctccgcgagctcgccagcaagtacggcccggtgatgttcctccggat 45871
Query: 281 cggccagatggacaccgtcgtcgtctcctcgccggccgcggcgcaggaggtgctccggga 340
|| ||||| ||||| |||||||||||||||||||| || ||||||||||||||||| ||
Sbjct: 45872 ggggcagatcgacacggtcgtcgtctcctcgccggcggcagcgcaggaggtgctccgcga 45931
Query: 341 caaggacctctcattcgcgtcgaggcccaacatcttggtctcagagatcttctgctacgg 400
||||||| || ||||||||| |||| | | || | ||||| ||||||||||||||||
Sbjct: 45932 caaggacgtcatgttcgcgtcgcggccgagcctcctcgtctcggagatcttctgctacga 45991
Query: 401 gggccgtaacgtcatcctcgcgccctacggcccctactggcggatgacgcgcaagctctg 460
|| ||||| | |||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 45992 caacctcgacgtcggcttcgcgccctacggcgcctactggcggatgctgcgcaagctctg 46051
Query: 461 cacggttgagctcct 475
|||||| ||||||||
Sbjct: 46052 cacggtggagctcct 46066
Score = 135 bits (68), Expect = 6e-28
Identities = 275/344 (79%)
Strand = Plus / Plus
Query: 1118 ggtgatcaaggagaccatgaggttaaaccctgtggtgccgttgcttgtccctcatctctg 1177
||||||||||||||| |||||||| || || ||| ||||| |||| | || ||||||||
Sbjct: 46811 ggtgatcaaggagactatgaggttgaatccagtgttgccgctgctgatgccccatctctg 46870
Query: 1178 tcaggaaacctgcgatgttggcggatttgagatcaaggagggcaccagggtcttggtcaa 1237
| ||| |||||||| |||| || | |||| || |||||| |||||||| | ||||
Sbjct: 46871 ccgggagacctgcgacattggtggttatgaggtcgtggaggggaccagggtggtcatcaa 46930
Query: 1238 tgcatgggcgatggcgagaagccccgagtactgggaaaacgcagaggagttcatgccgga 1297
| | |||||||||||||| ||||||||||||||||| |||| |||||||| | ||| ||
Sbjct: 46931 ttcgtgggcgatggcgaggagccccgagtactgggatgacgcggaggagtttaagccaga 46990
Query: 1298 gaggttcgaggacggcacggccacctacaagggctcgcggttcgagtacttgccgttcgg 1357
|||||| ||||| |||| ||| |||||| ||||| || || |||||||||||||| ||
Sbjct: 46991 gaggtttgaggatggcatggcagactacaaaggctcccgttttgagtacttgccgtttgg 47050
Query: 1358 cactggaaggaggaagtgccccggcgatacctttgggctggccacactggagctcgcggt 1417
|| || ||||||| ||||| || ||||| ||||| ||| | ||||||||| ||
Sbjct: 47051 aaccgggaggaggagatgccctggtgatacatttggtatggtcttgctggagctcatcgt 47110
Query: 1418 gacacggctcctctactattttgattggagcctccctgcgggaa 1461
| |||| || |||||||| || ||||||||||||||||| ||||
Sbjct: 47111 ggcacgccttctctactacttcgattggagcctccctgccggaa 47154
Score = 79.8 bits (40), Expect = 3e-11
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 941 ggatatgttcacggcagggacggagacgacgtcggcagtggccgagtgggtcatggctga 1000
|||||||||||||| |||||| |||||||||||| | | || |||||||||||| | ||
Sbjct: 46634 ggatatgttcacgggagggacagagacgacgtcgtcggccgcggagtgggtcatgtcgga 46693
Query: 1001 actcatgaggaacccaaaggtgatggccaagg 1032
|||||||||||||| |||| ||||||||||
Sbjct: 46694 gctcatgaggaaccctgaggtaatggccaagg 46725
Score = 71.9 bits (36), Expect = 7e-09
Identities = 102/124 (82%)
Strand = Plus / Plus
Query: 701 cggcggatccagcgtcggggacctggtcccgtcgctgtggttcgtcgacgccctcactgg 760
|||||||| | || |||| ||||| ||||||||||| ||||| |||||||| | || ||
Sbjct: 46310 cggcggattctgcttcggcgacctcttcccgtcgctgcggttcatcgacgccatgaccgg 46369
Query: 761 gctgagaggccgtctgtggcgtgcgcgccggcagctggatgccatcctggacaagatcat 820
|||||| |||| |||||||| || ||| |||||||||| || || | |||||||||||
Sbjct: 46370 gctgaggagccgcctgtggcgagcacgcgggcagctggactccgtcttcgacaagatcat 46429
Query: 821 cgct 824
||||
Sbjct: 46430 cgct 46433
Score = 52.0 bits (26), Expect = 0.007
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 600 tgcaccaacactatcaccgccaaggctacgttcggccaggtgtgcgacgaggagctccag 659
||||| ||||| |||||||||||||| ||||||| |||| ||||| || |||||||||
Sbjct: 46209 tgcacgaacacgatcaccgccaaggcggcgttcgggcaggcgtgcggcgtcgagctccag 46268
Query: 660 ga 661
||
Sbjct: 46269 ga 46270
>ref|NM_001058712.1 | Oryza sativa (japonica cultivar-group) Os04g0180400 (Os04g0180400)
mRNA, complete cds
Length = 1749
Score = 198 bits (100), Expect = 5e-47
Identities = 262/316 (82%)
Strand = Plus / Plus
Query: 160 ggcctccaggcccatggcgcctccccttgatcggaagcctccaccacgtcctcacgtcgc 219
|||||||||| |||||| |||||||||| |||| |||||| |||| ||||| |||||
Sbjct: 164 ggcctccagggccatggaacctccccttggtcggcggcctcctccacctcctccggtcgc 223
Query: 220 agccgcaggtcgccctccgggacctggccaagaagcacggccctgtcatgtacctccggt 279
| ||||||||||| ||||| || || |||| ||| ||||||| || |||| |||||||
Sbjct: 224 atccgcaggtcgcgctccgcgagctcgccagcaagtacggcccggtgatgttcctccgga 283
Query: 280 tcggccagatggacaccgtcgtcgtctcctcgccggccgcggcgcaggaggtgctccggg 339
| || ||||| ||||| ||||||||||| |||||||| |||||||||||||||||||| |
Sbjct: 284 tggggcagatcgacacggtcgtcgtctcatcgccggcggcggcgcaggaggtgctccgcg 343
Query: 340 acaaggacctctcattcgcgtcgaggcccaacatcttggtctcagagatcttctgctacg 399
|||||||| || ||||||||| |||| | | || | ||||| ||||||||||||||||
Sbjct: 344 acaaggacgtcatgttcgcgtcgcggccgagcctcctcgtctcggagatcttctgctacg 403
Query: 400 ggggccgtaacgtcatcctcgcgccctacggcccctactggcggatgacgcgcaagctct 459
|| ||||| | |||||||||||||| |||||||||||||| |||||||||||
Sbjct: 404 acaacctcgacgtcggcttcgcgccctacggcgcctactggcggatgctgcgcaagctct 463
Query: 460 gcacggttgagctcct 475
||||||| ||||||||
Sbjct: 464 gcacggtggagctcct 479
Score = 135 bits (68), Expect = 6e-28
Identities = 275/344 (79%)
Strand = Plus / Plus
Query: 1118 ggtgatcaaggagaccatgaggttaaaccctgtggtgccgttgcttgtccctcatctctg 1177
||||||||||||||| |||||||| || || ||| ||||| |||| | || ||||||||
Sbjct: 1134 ggtgatcaaggagactatgaggttgaatccagtgttgccgctgctgatgccccatctctg 1193
Query: 1178 tcaggaaacctgcgatgttggcggatttgagatcaaggagggcaccagggtcttggtcaa 1237
| ||| |||||||| |||| || | |||| || |||||| |||||||| || ||||
Sbjct: 1194 ccgggagacctgcgacattggtggttatgaggtcgtggaggggaccagggtggtgatcaa 1253
Query: 1238 tgcatgggcgatggcgagaagccccgagtactgggaaaacgcagaggagttcatgccgga 1297
| | |||||||||||||| ||||||||||||||||| |||| |||||||| | ||| ||
Sbjct: 1254 ttcgtgggcgatggcgaggagccccgagtactgggatgacgcggaggagtttaagccaga 1313
Query: 1298 gaggttcgaggacggcacggccacctacaagggctcgcggttcgagtacttgccgttcgg 1357
|||||| ||||| |||| ||| |||||| ||||| || || |||||||||||||| ||
Sbjct: 1314 gaggtttgaggatggcatggcagactacaaaggctcccgttttgagtacttgccgtttgg 1373
Query: 1358 cactggaaggaggaagtgccccggcgatacctttgggctggccacactggagctcgcggt 1417
|| || ||||||| ||||| || ||||| ||||| ||| | |||||||| ||
Sbjct: 1374 aaccgggaggaggagatgccctggtgatacatttggtatggtcttgttggagctcatcgt 1433
Query: 1418 gacacggctcctctactattttgattggagcctccctgcgggaa 1461
| |||| || |||||||| || ||||||||||||||||| ||||
Sbjct: 1434 ggcacgccttctctactacttcgattggagcctccctgccggaa 1477
Score = 99.6 bits (50), Expect = 3e-17
Identities = 116/138 (84%)
Strand = Plus / Plus
Query: 895 accttgaattccccatcgacatgacaaacatcaaggcgatcatattggatatgttcacgg 954
|||| ||||||||| ||| || || ||||||||||| || ||| |||||||||||||||
Sbjct: 911 acctcgaattccccttcggcacaacgaacatcaaggcaattatactggatatgttcacgg 970
Query: 955 cagggacggagacgacgtcggcagtggccgagtgggtcatggctgaactcatgaggaacc 1014
|||||| |||||||||||| | | || |||||||||||| | || |||||||||||||
Sbjct: 971 gagggacagagacgacgtcgtcggccgcggagtgggtcatgtcggagctcatgaggaacc 1030
Query: 1015 caaaggtgatggccaagg 1032
| |||| ||||||||||
Sbjct: 1031 ctgaggtaatggccaagg 1048
Score = 71.9 bits (36), Expect = 7e-09
Identities = 102/124 (82%)
Strand = Plus / Plus
Query: 701 cggcggatccagcgtcggggacctggtcccgtcgctgtggttcgtcgacgccctcactgg 760
|||||||| | || |||| ||||| ||||||||||| ||||| |||||||| | || ||
Sbjct: 723 cggcggattctgcttcggcgacctcttcccgtcgctgcggttcatcgacgccatgaccgg 782
Query: 761 gctgagaggccgtctgtggcgtgcgcgccggcagctggatgccatcctggacaagatcat 820
|||||| |||| |||||||| || ||| |||||||||| || || | |||||||||||
Sbjct: 783 gctgaggagccgcctgtggcgagcacgcgggcagctggactccgtcttcgacaagatcat 842
Query: 821 cgct 824
||||
Sbjct: 843 cgct 846
Score = 52.0 bits (26), Expect = 0.007
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 600 tgcaccaacactatcaccgccaaggctacgttcggccaggtgtgcgacgaggagctccag 659
||||| ||||| |||||||||||||| ||||||| |||| ||||| || |||||||||
Sbjct: 622 tgcacgaacacgatcaccgccaaggcggcgttcgggcaggcgtgcggcgtcgagctccag 681
Query: 660 ga 661
||
Sbjct: 682 ga 683
>dbj|AP008210.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
Length = 35498469
Score = 198 bits (100), Expect = 5e-47
Identities = 262/316 (82%)
Strand = Plus / Plus
Query: 160 ggcctccaggcccatggcgcctccccttgatcggaagcctccaccacgtcctcacgtcgc 219
|||||||||| |||||| |||||||||| |||| |||||| |||| ||||| |||||
Sbjct: 5449869 ggcctccagggccatggaacctccccttggtcggcggcctcctccacctcctccggtcgc 5449928
Query: 220 agccgcaggtcgccctccgggacctggccaagaagcacggccctgtcatgtacctccggt 279
| ||||||||||| ||||| || || |||| ||| ||||||| || |||| |||||||
Sbjct: 5449929 atccgcaggtcgcgctccgcgagctcgccagcaagtacggcccggtgatgttcctccgga 5449988
Query: 280 tcggccagatggacaccgtcgtcgtctcctcgccggccgcggcgcaggaggtgctccggg 339
| || ||||| ||||| ||||||||||| |||||||| |||||||||||||||||||| |
Sbjct: 5449989 tggggcagatcgacacggtcgtcgtctcatcgccggcggcggcgcaggaggtgctccgcg 5450048
Query: 340 acaaggacctctcattcgcgtcgaggcccaacatcttggtctcagagatcttctgctacg 399
|||||||| || ||||||||| |||| | | || | ||||| ||||||||||||||||
Sbjct: 5450049 acaaggacgtcatgttcgcgtcgcggccgagcctcctcgtctcggagatcttctgctacg 5450108
Query: 400 ggggccgtaacgtcatcctcgcgccctacggcccctactggcggatgacgcgcaagctct 459
|| ||||| | |||||||||||||| |||||||||||||| |||||||||||
Sbjct: 5450109 acaacctcgacgtcggcttcgcgccctacggcgcctactggcggatgctgcgcaagctct 5450168
Query: 460 gcacggttgagctcct 475
||||||| ||||||||
Sbjct: 5450169 gcacggtggagctcct 5450184
Score = 184 bits (93), Expect = 7e-43
Identities = 261/317 (82%)
Strand = Plus / Minus
Query: 159 cggcctccaggcccatggcgcctccccttgatcggaagcctccaccacgtcctcacgtcg 218
|||||||| || |||||| |||||||||| |||| |||||| |||| ||||| ||||
Sbjct: 5299080 cggcctccggggccatggaacctccccttggtcggcggcctcctccacctcctccggtcg 5299021
Query: 219 cagccgcaggtcgccctccgggacctggccaagaagcacggccctgtcatgtacctccgg 278
|| ||||||||||| ||||| ||||| ||| ||| ||||||| || |||| ||| |||
Sbjct: 5299020 caaccgcaggtcgcactccgcgacctcgccggcaagtacggcccggtgatgttcctgcgg 5298961
Query: 279 ttcggccagatggacaccgtcgtcgtctcctcgccggccgcggcgcaggaggtgctccgg 338
|| ||| ||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 5298960 acggggcaggtggacaccgtcgtgatctcctcgccggcggcggcgcaggaggtgctccgc 5298901
Query: 339 gacaaggacctctcattcgcgtcgaggcccaacatcttggtctcagagatcttctgctac 398
||||||||| || | ||||||||| |||| | | || | ||||| |||||||||||||||
Sbjct: 5298900 gacaaggacgtcaccttcgcgtcgcggccgagcctcctcgtctcggagatcttctgctac 5298841
Query: 399 gggggccgtaacgtcatcctcgcgccctacggcccctactggcggatgacgcgcaagctc 458
|| || || || | |||||||||||||| |||||||||||||| ||||||||||
Sbjct: 5298840 ggcaacctcgacatcggcttcgcgccctacggcgcctactggcggatgctgcgcaagctc 5298781
Query: 459 tgcacggttgagctcct 475
|||||||| ||||||||
Sbjct: 5298780 tgcacggtggagctcct 5298764
Score = 135 bits (68), Expect = 6e-28
Identities = 275/344 (79%)
Strand = Plus / Plus
Query: 1118 ggtgatcaaggagaccatgaggttaaaccctgtggtgccgttgcttgtccctcatctctg 1177
||||||||||||||| |||||||| || || ||| ||||| |||| | || ||||||||
Sbjct: 5450929 ggtgatcaaggagactatgaggttgaatccagtgttgccgctgctgatgccccatctctg 5450988
Query: 1178 tcaggaaacctgcgatgttggcggatttgagatcaaggagggcaccagggtcttggtcaa 1237
| ||| |||||||| |||| || | |||| || |||||| |||||||| || ||||
Sbjct: 5450989 ccgggagacctgcgacattggtggttatgaggtcgtggaggggaccagggtggtgatcaa 5451048
Query: 1238 tgcatgggcgatggcgagaagccccgagtactgggaaaacgcagaggagttcatgccgga 1297
| | |||||||||||||| ||||||||||||||||| |||| |||||||| | ||| ||
Sbjct: 5451049 ttcgtgggcgatggcgaggagccccgagtactgggatgacgcggaggagtttaagccaga 5451108
Query: 1298 gaggttcgaggacggcacggccacctacaagggctcgcggttcgagtacttgccgttcgg 1357
|||||| ||||| |||| ||| |||||| ||||| || || |||||||||||||| ||
Sbjct: 5451109 gaggtttgaggatggcatggcagactacaaaggctcccgttttgagtacttgccgtttgg 5451168
Query: 1358 cactggaaggaggaagtgccccggcgatacctttgggctggccacactggagctcgcggt 1417
|| || ||||||| ||||| || ||||| ||||| ||| | |||||||| ||
Sbjct: 5451169 aaccgggaggaggagatgccctggtgatacatttggtatggtcttgttggagctcatcgt 5451228
Query: 1418 gacacggctcctctactattttgattggagcctccctgcgggaa 1461
| |||| || |||||||| || ||||||||||||||||| ||||
Sbjct: 5451229 ggcacgccttctctactacttcgattggagcctccctgccggaa 5451272
Score = 83.8 bits (42), Expect = 2e-12
Identities = 186/234 (79%)
Strand = Plus / Minus
Query: 1118 ggtgatcaaggagaccatgaggttaaaccctgtggtgccgttgcttgtccctcatctctg 1177
|||||||||||||||| ||||| | || || ||| ||||| |||| |||| ||| | ||
Sbjct: 5297794 ggtgatcaaggagaccctgaggctgaatccggtgttgccgctgctactcccccatttatg 5297735
Query: 1178 tcaggaaacctgcgatgttggcggatttgagatcaaggagggcaccagggtcttggtcaa 1237
|| ||| |||||||| | || || | |||||| |||||||||||| || ||| ||||
Sbjct: 5297734 tcgggagacctgcgaaatcggagggtatgagattgtggagggcaccagagtgttgatcaa 5297675
Query: 1238 tgcatgggcgatggcgagaagccccgagtactgggaaaacgcagaggagttcatgccgga 1297
| | |||||||||||||| ||||||||||| ||||| | || ||| ||||||| || ||
Sbjct: 5297674 ttcgtgggcgatggcgaggagccccgagtattgggacgatgcggagaagttcataccaga 5297615
Query: 1298 gaggttcgaggacggcacggccacctacaagggctcgcggttcgagtacttgcc 1351
|||||| ||||| ||||| || || ||| ||||| || || |||||||||||
Sbjct: 5297614 gaggtttgaggatggcacagcggacttcaaaggctcccgttttgagtacttgcc 5297561
Score = 79.8 bits (40), Expect = 3e-11
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 941 ggatatgttcacggcagggacggagacgacgtcggcagtggccgagtgggtcatggctga 1000
|||||||||||||| |||||| |||||||||||| | | || |||||||||||| | ||
Sbjct: 5450752 ggatatgttcacgggagggacagagacgacgtcgtcggccgcggagtgggtcatgtcgga 5450811
Query: 1001 actcatgaggaacccaaaggtgatggccaagg 1032
|||||||||||||| |||| ||||||||||
Sbjct: 5450812 gctcatgaggaaccctgaggtaatggccaagg 5450843
Score = 71.9 bits (36), Expect = 7e-09
Identities = 102/124 (82%)
Strand = Plus / Plus
Query: 701 cggcggatccagcgtcggggacctggtcccgtcgctgtggttcgtcgacgccctcactgg 760
|||||||| | || |||| ||||| ||||||||||| ||||| |||||||| | || ||
Sbjct: 5450428 cggcggattctgcttcggcgacctcttcccgtcgctgcggttcatcgacgccatgaccgg 5450487
Query: 761 gctgagaggccgtctgtggcgtgcgcgccggcagctggatgccatcctggacaagatcat 820
|||||| |||| |||||||| || ||| |||||||||| || || | |||||||||||
Sbjct: 5450488 gctgaggagccgcctgtggcgagcacgcgggcagctggactccgtcttcgacaagatcat 5450547
Query: 821 cgct 824
||||
Sbjct: 5450548 cgct 5450551
Score = 63.9 bits (32), Expect = 2e-06
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 1005 atgaggaacccaaaggtgatggccaaggcgcaggctgaagtgcg 1048
|||||||||||| ||||||||||||||| ||||||||| |||||
Sbjct: 5297907 atgaggaacccagaggtgatggccaaggtgcaggctgaggtgcg 5297864
Score = 52.0 bits (26), Expect = 0.007
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 600 tgcaccaacactatcaccgccaaggctacgttcggccaggtgtgcgacgaggagctccag 659
||||| ||||| |||||||||||||| ||||||| |||| ||||| || |||||||||
Sbjct: 5450327 tgcacgaacacgatcaccgccaaggcggcgttcgggcaggcgtgcggcgtcgagctccag 5450386
Query: 660 ga 661
||
Sbjct: 5450387 ga 5450388
Score = 46.1 bits (23), Expect = 0.42
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 587 gctgctcatttcctgcaccaacactatcaccgccaaggctacgttcggccaggtgtgcga 646
||||||||| || ||||| ||||| ||||||| ||||| ||||||| |||| |||||
Sbjct: 5298652 gctgctcatctcgtgcacgaacacgttcaccgcgaaggcggcgttcgggcaggcgtgcgg 5298593
Query: 647 cgaggagctccagga 661
|| |||||||||||
Sbjct: 5298592 cggcgagctccagga 5298578
>emb|AL662936.4 |OSJN00137 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0052P16,
complete sequence
Length = 155702
Score = 198 bits (100), Expect = 5e-47
Identities = 262/316 (82%)
Strand = Plus / Plus
Query: 160 ggcctccaggcccatggcgcctccccttgatcggaagcctccaccacgtcctcacgtcgc 219
|||||||||| |||||| |||||||||| |||| |||||| |||| ||||| |||||
Sbjct: 150518 ggcctccagggccatggaacctccccttggtcggcggcctcctccacctcctccggtcgc 150577
Query: 220 agccgcaggtcgccctccgggacctggccaagaagcacggccctgtcatgtacctccggt 279
| ||||||||||| ||||| || || |||| ||| ||||||| || |||| |||||||
Sbjct: 150578 atccgcaggtcgcgctccgcgagctcgccagcaagtacggcccggtgatgttcctccgga 150637
Query: 280 tcggccagatggacaccgtcgtcgtctcctcgccggccgcggcgcaggaggtgctccggg 339
| || ||||| ||||| ||||||||||| |||||||| |||||||||||||||||||| |
Sbjct: 150638 tggggcagatcgacacggtcgtcgtctcatcgccggcggcggcgcaggaggtgctccgcg 150697
Query: 340 acaaggacctctcattcgcgtcgaggcccaacatcttggtctcagagatcttctgctacg 399
|||||||| || ||||||||| |||| | | || | ||||| ||||||||||||||||
Sbjct: 150698 acaaggacgtcatgttcgcgtcgcggccgagcctcctcgtctcggagatcttctgctacg 150757
Query: 400 ggggccgtaacgtcatcctcgcgccctacggcccctactggcggatgacgcgcaagctct 459
|| ||||| | |||||||||||||| |||||||||||||| |||||||||||
Sbjct: 150758 acaacctcgacgtcggcttcgcgccctacggcgcctactggcggatgctgcgcaagctct 150817
Query: 460 gcacggttgagctcct 475
||||||| ||||||||
Sbjct: 150818 gcacggtggagctcct 150833
Score = 135 bits (68), Expect = 6e-28
Identities = 275/344 (79%)
Strand = Plus / Plus
Query: 1118 ggtgatcaaggagaccatgaggttaaaccctgtggtgccgttgcttgtccctcatctctg 1177
||||||||||||||| |||||||| || || ||| ||||| |||| | || ||||||||
Sbjct: 151578 ggtgatcaaggagactatgaggttgaatccagtgttgccgctgctgatgccccatctctg 151637
Query: 1178 tcaggaaacctgcgatgttggcggatttgagatcaaggagggcaccagggtcttggtcaa 1237
| ||| |||||||| |||| || | |||| || |||||| |||||||| || ||||
Sbjct: 151638 ccgggagacctgcgacattggtggttatgaggtcgtggaggggaccagggtggtgatcaa 151697
Query: 1238 tgcatgggcgatggcgagaagccccgagtactgggaaaacgcagaggagttcatgccgga 1297
| | |||||||||||||| ||||||||||||||||| |||| |||||||| | ||| ||
Sbjct: 151698 ttcgtgggcgatggcgaggagccccgagtactgggatgacgcggaggagtttaagccaga 151757
Query: 1298 gaggttcgaggacggcacggccacctacaagggctcgcggttcgagtacttgccgttcgg 1357
|||||| ||||| |||| ||| |||||| ||||| || || |||||||||||||| ||
Sbjct: 151758 gaggtttgaggatggcatggcagactacaaaggctcccgttttgagtacttgccgtttgg 151817
Query: 1358 cactggaaggaggaagtgccccggcgatacctttgggctggccacactggagctcgcggt 1417
|| || ||||||| ||||| || ||||| ||||| ||| | |||||||| ||
Sbjct: 151818 aaccgggaggaggagatgccctggtgatacatttggtatggtcttgttggagctcatcgt 151877
Query: 1418 gacacggctcctctactattttgattggagcctccctgcgggaa 1461
| |||| || |||||||| || ||||||||||||||||| ||||
Sbjct: 151878 ggcacgccttctctactacttcgattggagcctccctgccggaa 151921
Score = 79.8 bits (40), Expect = 3e-11
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 941 ggatatgttcacggcagggacggagacgacgtcggcagtggccgagtgggtcatggctga 1000
|||||||||||||| |||||| |||||||||||| | | || |||||||||||| | ||
Sbjct: 151401 ggatatgttcacgggagggacagagacgacgtcgtcggccgcggagtgggtcatgtcgga 151460
Query: 1001 actcatgaggaacccaaaggtgatggccaagg 1032
|||||||||||||| |||| ||||||||||
Sbjct: 151461 gctcatgaggaaccctgaggtaatggccaagg 151492
Score = 71.9 bits (36), Expect = 7e-09
Identities = 102/124 (82%)
Strand = Plus / Plus
Query: 701 cggcggatccagcgtcggggacctggtcccgtcgctgtggttcgtcgacgccctcactgg 760
|||||||| | || |||| ||||| ||||||||||| ||||| |||||||| | || ||
Sbjct: 151077 cggcggattctgcttcggcgacctcttcccgtcgctgcggttcatcgacgccatgaccgg 151136
Query: 761 gctgagaggccgtctgtggcgtgcgcgccggcagctggatgccatcctggacaagatcat 820
|||||| |||| |||||||| || ||| |||||||||| || || | |||||||||||
Sbjct: 151137 gctgaggagccgcctgtggcgagcacgcgggcagctggactccgtcttcgacaagatcat 151196
Query: 821 cgct 824
||||
Sbjct: 151197 cgct 151200
Score = 52.0 bits (26), Expect = 0.007
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 600 tgcaccaacactatcaccgccaaggctacgttcggccaggtgtgcgacgaggagctccag 659
||||| ||||| |||||||||||||| ||||||| |||| ||||| || |||||||||
Sbjct: 150976 tgcacgaacacgatcaccgccaaggcggcgttcgggcaggcgtgcggcgtcgagctccag 151035
Query: 660 ga 661
||
Sbjct: 151036 ga 151037
>dbj|AK071546.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023100C12, full
insert sequence
Length = 1750
Score = 198 bits (100), Expect = 5e-47
Identities = 262/316 (82%)
Strand = Plus / Plus
Query: 160 ggcctccaggcccatggcgcctccccttgatcggaagcctccaccacgtcctcacgtcgc 219
|||||||||| |||||| |||||||||| |||| |||||| |||| ||||| |||||
Sbjct: 165 ggcctccagggccatggaacctccccttggtcggcggcctcctccacctcctccggtcgc 224
Query: 220 agccgcaggtcgccctccgggacctggccaagaagcacggccctgtcatgtacctccggt 279
| ||||||||||| ||||| || || |||| ||| ||||||| || |||| |||||||
Sbjct: 225 atccgcaggtcgcgctccgcgagctcgccagcaagtacggcccggtgatgttcctccgga 284
Query: 280 tcggccagatggacaccgtcgtcgtctcctcgccggccgcggcgcaggaggtgctccggg 339
| || ||||| ||||| ||||||||||| |||||||| |||||||||||||||||||| |
Sbjct: 285 tggggcagatcgacacggtcgtcgtctcatcgccggcggcggcgcaggaggtgctccgcg 344
Query: 340 acaaggacctctcattcgcgtcgaggcccaacatcttggtctcagagatcttctgctacg 399
|||||||| || ||||||||| |||| | | || | ||||| ||||||||||||||||
Sbjct: 345 acaaggacgtcatgttcgcgtcgcggccgagcctcctcgtctcggagatcttctgctacg 404
Query: 400 ggggccgtaacgtcatcctcgcgccctacggcccctactggcggatgacgcgcaagctct 459
|| ||||| | |||||||||||||| |||||||||||||| |||||||||||
Sbjct: 405 acaacctcgacgtcggcttcgcgccctacggcgcctactggcggatgctgcgcaagctct 464
Query: 460 gcacggttgagctcct 475
||||||| ||||||||
Sbjct: 465 gcacggtggagctcct 480
Score = 135 bits (68), Expect = 6e-28
Identities = 275/344 (79%)
Strand = Plus / Plus
Query: 1118 ggtgatcaaggagaccatgaggttaaaccctgtggtgccgttgcttgtccctcatctctg 1177
||||||||||||||| |||||||| || || ||| ||||| |||| | || ||||||||
Sbjct: 1135 ggtgatcaaggagactatgaggttgaatccagtgttgccgctgctgatgccccatctctg 1194
Query: 1178 tcaggaaacctgcgatgttggcggatttgagatcaaggagggcaccagggtcttggtcaa 1237
| ||| |||||||| |||| || | |||| || |||||| |||||||| || ||||
Sbjct: 1195 ccgggagacctgcgacattggtggttatgaggtcgtggaggggaccagggtggtgatcaa 1254
Query: 1238 tgcatgggcgatggcgagaagccccgagtactgggaaaacgcagaggagttcatgccgga 1297
| | |||||||||||||| ||||||||||||||||| |||| |||||||| | ||| ||
Sbjct: 1255 ttcgtgggcgatggcgaggagccccgagtactgggatgacgcggaggagtttaagccaga 1314
Query: 1298 gaggttcgaggacggcacggccacctacaagggctcgcggttcgagtacttgccgttcgg 1357
|||||| ||||| |||| ||| |||||| ||||| || || |||||||||||||| ||
Sbjct: 1315 gaggtttgaggatggcatggcagactacaaaggctcccgttttgagtacttgccgtttgg 1374
Query: 1358 cactggaaggaggaagtgccccggcgatacctttgggctggccacactggagctcgcggt 1417
|| || ||||||| ||||| || ||||| ||||| ||| | |||||||| ||
Sbjct: 1375 aaccgggaggaggagatgccctggtgatacatttggtatggtcttgttggagctcatcgt 1434
Query: 1418 gacacggctcctctactattttgattggagcctccctgcgggaa 1461
| |||| || |||||||| || ||||||||||||||||| ||||
Sbjct: 1435 ggcacgccttctctactacttcgattggagcctccctgccggaa 1478
Score = 99.6 bits (50), Expect = 3e-17
Identities = 116/138 (84%)
Strand = Plus / Plus
Query: 895 accttgaattccccatcgacatgacaaacatcaaggcgatcatattggatatgttcacgg 954
|||| ||||||||| ||| || || ||||||||||| || ||| |||||||||||||||
Sbjct: 912 acctcgaattccccttcggcacaacgaacatcaaggcaattatactggatatgttcacgg 971
Query: 955 cagggacggagacgacgtcggcagtggccgagtgggtcatggctgaactcatgaggaacc 1014
|||||| |||||||||||| | | || |||||||||||| | || |||||||||||||
Sbjct: 972 gagggacagagacgacgtcgtcggccgcggagtgggtcatgtcggagctcatgaggaacc 1031
Query: 1015 caaaggtgatggccaagg 1032
| |||| ||||||||||
Sbjct: 1032 ctgaggtaatggccaagg 1049
Score = 71.9 bits (36), Expect = 7e-09
Identities = 102/124 (82%)
Strand = Plus / Plus
Query: 701 cggcggatccagcgtcggggacctggtcccgtcgctgtggttcgtcgacgccctcactgg 760
|||||||| | || |||| ||||| ||||||||||| ||||| |||||||| | || ||
Sbjct: 724 cggcggattctgcttcggcgacctcttcccgtcgctgcggttcatcgacgccatgaccgg 783
Query: 761 gctgagaggccgtctgtggcgtgcgcgccggcagctggatgccatcctggacaagatcat 820
|||||| |||| |||||||| || ||| |||||||||| || || | |||||||||||
Sbjct: 784 gctgaggagccgcctgtggcgagcacgcgggcagctggactccgtcttcgacaagatcat 843
Query: 821 cgct 824
||||
Sbjct: 844 cgct 847
Score = 52.0 bits (26), Expect = 0.007
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 600 tgcaccaacactatcaccgccaaggctacgttcggccaggtgtgcgacgaggagctccag 659
||||| ||||| |||||||||||||| ||||||| |||| ||||| || |||||||||
Sbjct: 623 tgcacgaacacgatcaccgccaaggcggcgttcgggcaggcgtgcggcgtcgagctccag 682
Query: 660 ga 661
||
Sbjct: 683 ga 684
>emb|AL662934.3 |OSJN00136 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027O01,
complete sequence
Length = 150283
Score = 198 bits (100), Expect = 5e-47
Identities = 262/316 (82%)
Strand = Plus / Plus
Query: 160 ggcctccaggcccatggcgcctccccttgatcggaagcctccaccacgtcctcacgtcgc 219
|||||||||| |||||| |||||||||| |||| |||||| |||| ||||| |||||
Sbjct: 4499 ggcctccagggccatggaacctccccttggtcggcggcctcctccacctcctccggtcgc 4558
Query: 220 agccgcaggtcgccctccgggacctggccaagaagcacggccctgtcatgtacctccggt 279
| ||||||||||| ||||| || || |||| ||| ||||||| || |||| |||||||
Sbjct: 4559 atccgcaggtcgcgctccgcgagctcgccagcaagtacggcccggtgatgttcctccgga 4618
Query: 280 tcggccagatggacaccgtcgtcgtctcctcgccggccgcggcgcaggaggtgctccggg 339
| || ||||| ||||| ||||||||||| |||||||| |||||||||||||||||||| |
Sbjct: 4619 tggggcagatcgacacggtcgtcgtctcatcgccggcggcggcgcaggaggtgctccgcg 4678
Query: 340 acaaggacctctcattcgcgtcgaggcccaacatcttggtctcagagatcttctgctacg 399
|||||||| || ||||||||| |||| | | || | ||||| ||||||||||||||||
Sbjct: 4679 acaaggacgtcatgttcgcgtcgcggccgagcctcctcgtctcggagatcttctgctacg 4738
Query: 400 ggggccgtaacgtcatcctcgcgccctacggcccctactggcggatgacgcgcaagctct 459
|| ||||| | |||||||||||||| |||||||||||||| |||||||||||
Sbjct: 4739 acaacctcgacgtcggcttcgcgccctacggcgcctactggcggatgctgcgcaagctct 4798
Query: 460 gcacggttgagctcct 475
||||||| ||||||||
Sbjct: 4799 gcacggtggagctcct 4814
Score = 135 bits (68), Expect = 6e-28
Identities = 275/344 (79%)
Strand = Plus / Plus
Query: 1118 ggtgatcaaggagaccatgaggttaaaccctgtggtgccgttgcttgtccctcatctctg 1177
||||||||||||||| |||||||| || || ||| ||||| |||| | || ||||||||
Sbjct: 5559 ggtgatcaaggagactatgaggttgaatccagtgttgccgctgctgatgccccatctctg 5618
Query: 1178 tcaggaaacctgcgatgttggcggatttgagatcaaggagggcaccagggtcttggtcaa 1237
| ||| |||||||| |||| || | |||| || |||||| |||||||| || ||||
Sbjct: 5619 ccgggagacctgcgacattggtggttatgaggtcgtggaggggaccagggtggtgatcaa 5678
Query: 1238 tgcatgggcgatggcgagaagccccgagtactgggaaaacgcagaggagttcatgccgga 1297
| | |||||||||||||| ||||||||||||||||| |||| |||||||| | ||| ||
Sbjct: 5679 ttcgtgggcgatggcgaggagccccgagtactgggatgacgcggaggagtttaagccaga 5738
Query: 1298 gaggttcgaggacggcacggccacctacaagggctcgcggttcgagtacttgccgttcgg 1357
|||||| ||||| |||| ||| |||||| ||||| || || |||||||||||||| ||
Sbjct: 5739 gaggtttgaggatggcatggcagactacaaaggctcccgttttgagtacttgccgtttgg 5798
Query: 1358 cactggaaggaggaagtgccccggcgatacctttgggctggccacactggagctcgcggt 1417
|| || ||||||| ||||| || ||||| ||||| ||| | |||||||| ||
Sbjct: 5799 aaccgggaggaggagatgccctggtgatacatttggtatggtcttgttggagctcatcgt 5858
Query: 1418 gacacggctcctctactattttgattggagcctccctgcgggaa 1461
| |||| || |||||||| || ||||||||||||||||| ||||
Sbjct: 5859 ggcacgccttctctactacttcgattggagcctccctgccggaa 5902
Score = 79.8 bits (40), Expect = 3e-11
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 941 ggatatgttcacggcagggacggagacgacgtcggcagtggccgagtgggtcatggctga 1000
|||||||||||||| |||||| |||||||||||| | | || |||||||||||| | ||
Sbjct: 5382 ggatatgttcacgggagggacagagacgacgtcgtcggccgcggagtgggtcatgtcgga 5441
Query: 1001 actcatgaggaacccaaaggtgatggccaagg 1032
|||||||||||||| |||| ||||||||||
Sbjct: 5442 gctcatgaggaaccctgaggtaatggccaagg 5473
Score = 71.9 bits (36), Expect = 7e-09
Identities = 102/124 (82%)
Strand = Plus / Plus
Query: 701 cggcggatccagcgtcggggacctggtcccgtcgctgtggttcgtcgacgccctcactgg 760
|||||||| | || |||| ||||| ||||||||||| ||||| |||||||| | || ||
Sbjct: 5058 cggcggattctgcttcggcgacctcttcccgtcgctgcggttcatcgacgccatgaccgg 5117
Query: 761 gctgagaggccgtctgtggcgtgcgcgccggcagctggatgccatcctggacaagatcat 820
|||||| |||| |||||||| || ||| |||||||||| || || | |||||||||||
Sbjct: 5118 gctgaggagccgcctgtggcgagcacgcgggcagctggactccgtcttcgacaagatcat 5177
Query: 821 cgct 824
||||
Sbjct: 5178 cgct 5181
Score = 52.0 bits (26), Expect = 0.007
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 600 tgcaccaacactatcaccgccaaggctacgttcggccaggtgtgcgacgaggagctccag 659
||||| ||||| |||||||||||||| ||||||| |||| ||||| || |||||||||
Sbjct: 4957 tgcacgaacacgatcaccgccaaggcggcgttcgggcaggcgtgcggcgtcgagctccag 5016
Query: 660 ga 661
||
Sbjct: 5017 ga 5018
>emb|CR855057.1 | Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0109M01,
complete sequence
Length = 91447
Score = 139 bits (70), Expect = 4e-29
Identities = 199/242 (82%)
Strand = Plus / Minus
Query: 159 cggcctccaggcccatggcgcctccccttgatcggaagcctccaccacgtcctcacgtcg 218
|||||||| || |||||| |||||||||| |||| |||||| |||| ||||| ||||
Sbjct: 2430 cggcctccggggccatggaacctccccttggtcggcggcctcctccacctcctccggtcg 2371
Query: 219 cagccgcaggtcgccctccgggacctggccaagaagcacggccctgtcatgtacctccgg 278
|| ||||||||||| ||||| ||||| ||| ||| ||||||| || |||| ||| |||
Sbjct: 2370 caaccgcaggtcgcactccgcgacctcgccggcaagtacggcccggtgatgttcctgcgg 2311
Query: 279 ttcggccagatggacaccgtcgtcgtctcctcgccggccgcggcgcaggaggtgctccgg 338
|| ||| ||||||||||||| ||||| |||||||| || ||||||||||||||||||
Sbjct: 2310 acggggcaggtggacaccgtcgtggtctcgtcgccggcggcagcgcaggaggtgctccgg 2251
Query: 339 gacaaggacctctcattcgcgtcgaggcccaacatcttggtctcagagatcttctgctac 398
||||||||| || ||||||||| |||| | | || | ||||| |||||||||||||||
Sbjct: 2250 gacaaggacgtcatcttcgcgtcgcggccgagcctcctcgtctcggagatcttctgctac 2191
Query: 399 gg 400
||
Sbjct: 2190 gg 2189
Score = 99.6 bits (50), Expect = 3e-17
Identities = 161/198 (81%)
Strand = Plus / Minus
Query: 1118 ggtgatcaaggagaccatgaggttaaaccctgtggtgccgttgcttgtccctcatctctg 1177
|||||||||||||||| ||||| | || || ||| ||||| |||| |||| ||| ||||
Sbjct: 1143 ggtgatcaaggagaccctgaggctgaatccggtgttgccgctgctactcccccatttctg 1084
Query: 1178 tcaggaaacctgcgatgttggcggatttgagatcaaggagggcaccagggtcttggtcaa 1237
|| ||| |||||||| | || || | ||||||| |||||||||||| || ||| ||||
Sbjct: 1083 tcgggagacctgcgaaatcggagggtatgagatcgtggagggcaccagagtgttgatcaa 1024
Query: 1238 tgcatgggcgatggcgagaagccccgagtactgggaaaacgcagaggagttcatgccgga 1297
| | |||||||||||||| ||||||||||| ||||| | || ||| ||||||| || ||
Sbjct: 1023 ttcgtgggcgatggcgaggagccccgagtattgggacgatgcggagaagttcataccaga 964
Query: 1298 gaggttcgaggacggcac 1315
|||||| ||||| |||||
Sbjct: 963 gaggtttgaggatggcac 946
Score = 83.8 bits (42), Expect = 2e-12
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 418 tcgcgccctacggcccctactggcggatgacgcgcaagctctgcacggttgagctcct 475
|||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 2171 tcgcgccctacggcgcctactggcggatgctgcgcaagctctgcacggtggagctcct 2114
Score = 71.9 bits (36), Expect = 7e-09
Identities = 90/108 (83%)
Strand = Plus / Minus
Query: 941 ggatatgttcacggcagggacggagacgacgtcggcagtggccgagtgggtcatggctga 1000
|||||||||||||| |||||| |||||||| || | |||||||| ||||| | ||
Sbjct: 1320 ggatatgttcacgggagggacagagacgacatcatctaccaccgagtggctcatgtcgga 1261
Query: 1001 actcatgaggaacccaaaggtgatggccaaggcgcaggctgaagtgcg 1048
|| |||||||||||| ||||||||||||||| ||||||||| |||||
Sbjct: 1260 gctgatgaggaacccagaggtgatggccaaggtgcaggctgaggtgcg 1213
>emb|AL604066.9 | Mouse DNA sequence from clone RP23-174M12 on chromosome 11 Contains the
3' end of a novel gene, the Mnt gene for max binding
protein, two novel genes, the Srr gene for serine
racemase, the 5' end of a novel gene and five CpG islands,
complete sequence
Length = 184151
Score = 44.1 bits (22), Expect = 1.6
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1552 gtgcttgctaggcaaatactatctat 1577
||||||| ||||||||||||||||||
Sbjct: 164609 gtgcttggtaggcaaatactatctat 164634
>gb|AC163663.3 | Mus musculus BAC clone RP24-241H23 from chromosome 6, complete sequence
Length = 176956
Score = 42.1 bits (21), Expect = 6.5
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1567 atactatctatgtgctctctt 1587
|||||||||||||||||||||
Sbjct: 174584 atactatctatgtgctctctt 174604
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 250,714,291
Number of extensions: 13248172
Number of successful extensions: 240072
Number of sequences better than 10.0: 113
Number of HSP's gapped: 240061
Number of HSP's successfully gapped: 190
Length of query: 1707
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1684
Effective length of database: 18,503,978,556
Effective search space: 31160699888304
Effective search space used: 31160699888304
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)