ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf153d08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9Y7B6:PANB_EMENI 3-methyl-2-oxobutanoate hydroxymethyltransfera... 30 8.7

>Q9Y7B6:PANB_EMENI 3-methyl-2-oxobutanoate hydroxymethyltransferase - Emericella|
           nidulans (Aspergillus nidulans)
          Length = 349
 Score = 30.4 bits (67), Expect = 8.7
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
 Frame = +3

Query: 6   HARSVPSIAQS---------GSSRACGLQELTVAENFVRAERDRGVRREGGSTMASSMQR 158
           H RSV   AQS         GS      Q L  A   V+  R +GV+ EGG  MA +++R
Sbjct: 129 HCRSVARAAQSAFTVSDLPMGSYEVSPEQALQSAIRIVKEGRVQGVKLEGGEEMAPAIKR 188


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 122,655,057
Number of extensions: 2459206
Number of successful extensions: 5580
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5578
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 100,686,439
Length adjustment: 111
Effective length of query: 159
Effective length of database: 70,239,694
Effective search space: 11168111346
Effective search space used: 11168111346
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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