>ref|NM_001064898.1| Oryza sativa (japonica cultivar-group) Os06g0678500 (Os06g0678500)
           mRNA, complete cds
          Length = 369
 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 69/82 (84%), Gaps = 6/82 (7%)
 Strand = Plus / Plus

                                                                       
Query: 169 tgctccaggtcgtccggagctcgtcccgctcccgcaagaggga------cggcgtcttct 222
           |||||||||||||||||| |||||||||||| |||||| | ||      || ||||||||
Sbjct: 26  tgctccaggtcgtccggacctcgtcccgctcgcgcaagggcgagggcggcgtcgtcttct 85

                                 
Query: 223 ccgaggccgcgccctggcagca 244
           |||||| |||||| ||||||||
Sbjct: 86  ccgaggtcgcgccgtggcagca 107



 Score = 54.0 bits (27), Expect = 8e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 274 cgccgcggccgccagcgaggctggacaccatcgtcgaggaaga 316
           ||||||||||| | |||| ||||||||||||||| ||||||||
Sbjct: 158 cgccgcggccggcggcgaagctggacaccatcgtggaggaaga 200

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 69/82 (84%), Gaps = 6/82 (7%)
 Strand = Plus / Plus

                                                                            
Query: 169      tgctccaggtcgtccggagctcgtcccgctcccgcaagaggga------cggcgtcttct 222
                |||||||||||||||||| |||||||||||| |||||| | ||      || ||||||||
Sbjct: 27820260 tgctccaggtcgtccggacctcgtcccgctcgcgcaagggcgagggcggcgtcgtcttct 27820319

                                      
Query: 223      ccgaggccgcgccctggcagca 244
                |||||| |||||| ||||||||
Sbjct: 27820320 ccgaggtcgcgccgtggcagca 27820341



 Score = 54.0 bits (27), Expect = 8e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 274      cgccgcggccgccagcgaggctggacaccatcgtcgaggaaga 316
                ||||||||||| | |||| ||||||||||||||| ||||||||
Sbjct: 27820392 cgccgcggccggcggcgaagctggacaccatcgtggaggaaga 27820434

>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1153E06
          Length = 174588

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 69/82 (84%), Gaps = 6/82 (7%)
 Strand = Plus / Plus

                                                                          
Query: 169    tgctccaggtcgtccggagctcgtcccgctcccgcaagaggga------cggcgtcttct 222
              |||||||||||||||||| |||||||||||| |||||| | ||      || ||||||||
Sbjct: 169515 tgctccaggtcgtccggacctcgtcccgctcgcgcaagggcgagggcggcgtcgtcttct 169574

                                    
Query: 223    ccgaggccgcgccctggcagca 244
              |||||| |||||| ||||||||
Sbjct: 169575 ccgaggtcgcgccgtggcagca 169596



 Score = 54.0 bits (27), Expect = 8e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                         
Query: 274    cgccgcggccgccagcgaggctggacaccatcgtcgaggaaga 316
              ||||||||||| | |||| ||||||||||||||| ||||||||
Sbjct: 169647 cgccgcggccggcggcgaagctggacaccatcgtggaggaaga 169689

>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0710B08
          Length = 186991

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 69/82 (84%), Gaps = 6/82 (7%)
 Strand = Plus / Plus

                                                                          
Query: 169    tgctccaggtcgtccggagctcgtcccgctcccgcaagaggga------cggcgtcttct 222
              |||||||||||||||||| |||||||||||| |||||| | ||      || ||||||||
Sbjct: 122769 tgctccaggtcgtccggacctcgtcccgctcgcgcaagggcgagggcggcgtcgtcttct 122828

                                    
Query: 223    ccgaggccgcgccctggcagca 244
              |||||| |||||| ||||||||
Sbjct: 122829 ccgaggtcgcgccgtggcagca 122850



 Score = 54.0 bits (27), Expect = 8e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                         
Query: 274    cgccgcggccgccagcgaggctggacaccatcgtcgaggaaga 316
              ||||||||||| | |||| ||||||||||||||| ||||||||
Sbjct: 122901 cgccgcggccggcggcgaagctggacaccatcgtggaggaaga 122943

>emb|CT836311.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN027O06, full
           insert sequence
          Length = 947

 Score = 54.0 bits (27), Expect = 8e-04
 Identities = 68/82 (82%), Gaps = 6/82 (7%)
 Strand = Plus / Plus

                                                                       
Query: 169 tgctccaggtcgtccggagctcgtcccgctcccgcaagaggga------cggcgtcttct 222
           |||||||||| ||||||| |||||||||||| |||||| | ||      || ||||||||
Sbjct: 105 tgctccaggtagtccggacctcgtcccgctcgcgcaagggcgagggcggcgtcgtcttct 164

                                 
Query: 223 ccgaggccgcgccctggcagca 244
           |||||| |||||| ||||||||
Sbjct: 165 ccgaggtcgcgccatggcagca 186



 Score = 54.0 bits (27), Expect = 8e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 274 cgccgcggccgccagcgaggctggacaccatcgtcgaggaaga 316
           ||||||||||| | |||| ||||||||||||||| ||||||||
Sbjct: 237 cgccgcggccggcggcgaagctggacaccatcgtggaggaaga 279

>ref|XM_384340.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG04164.1)
           partial mRNA
          Length = 987

 Score = 46.1 bits (23), Expect = 0.20
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 403 cgtcgtcctcgtccatggccgcg 425
           |||||||||||||||||||||||
Sbjct: 145 cgtcgtcctcgtccatggccgcg 123

>gb|AC169371.2| Sorghum bicolor clone SB_BBc0127F08, complete sequence
          Length = 70712

 Score = 46.1 bits (23), Expect = 0.20
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 264  agggcgcccccgccgcggccgcc 286
            |||||||||||||||||||||||
Sbjct: 1135 agggcgcccccgccgcggccgcc 1113

>dbj|AB037276.1| Cynomolgus Epstein-Barr Virus Si-IIA gene for EBNA-1, complete cds
          Length = 2259

 Score = 46.1 bits (23), Expect = 0.20
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 405 tcgtcctcgtccatggccgcggc 427
           |||||||||||||||||||||||
Sbjct: 397 tcgtcctcgtccatggccgcggc 375

>dbj|AB037275.1| Cynomolgus Epstein-Barr Virus TsB-B6 gene for EBNA-1, complete cds
          Length = 1969

 Score = 46.1 bits (23), Expect = 0.20
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 405 tcgtcctcgtccatggccgcggc 427
           |||||||||||||||||||||||
Sbjct: 259 tcgtcctcgtccatggccgcggc 237

>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence
          Length = 7497934

 Score = 44.1 bits (22), Expect = 0.77
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 256     gctccggcagggcgcccccgcc 277
               ||||||||||||||||||||||
Sbjct: 7393696 gctccggcagggcgcccccgcc 7393717

>ref|XM_860201.1| PREDICTED: Canis familiaris similar to Transcription factor SOX-8,
            transcript variant 4 (LOC490082), mRNA
          Length = 1392

 Score = 44.1 bits (22), Expect = 0.77
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 268  cgcccccgccgcggccgccagc 289
            ||||||||||||||||||||||
Sbjct: 1152 cgcccccgccgcggccgccagc 1173

>ref|XM_847131.1| PREDICTED: Canis familiaris similar to Transcription factor SOX-8,
            transcript variant 2 (LOC490082), mRNA
          Length = 1389

 Score = 44.1 bits (22), Expect = 0.77
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 268  cgcccccgccgcggccgccagc 289
            ||||||||||||||||||||||
Sbjct: 1149 cgcccccgccgcggccgccagc 1170

>ref|XM_547203.2| PREDICTED: Canis familiaris similar to Transcription factor SOX-8,
           transcript variant 1 (LOC490082), mRNA
          Length = 1217

 Score = 44.1 bits (22), Expect = 0.77
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 268 cgcccccgccgcggccgccagc 289
           ||||||||||||||||||||||
Sbjct: 977 cgcccccgccgcggccgccagc 998

>ref|XM_860152.1| PREDICTED: Canis familiaris similar to Transcription factor SOX-8,
            transcript variant 3 (LOC490082), mRNA
          Length = 1380

 Score = 44.1 bits (22), Expect = 0.77
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 268  cgcccccgccgcggccgccagc 289
            ||||||||||||||||||||||
Sbjct: 1140 cgcccccgccgcggccgccagc 1161

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 44.1 bits (22), Expect = 0.77
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 182     ccggagctcgtcccgctcccgc 203
               ||||||||||||||||||||||
Sbjct: 1598336 ccggagctcgtcccgctcccgc 1598315

>emb|AL591122.20| Human DNA sequence from clone RP11-415K20 on chromosome 1 Contains a
             peptidylprolyl isomerase A (cyclophilin A) (PPIA)
             pseudogene, complete sequence
          Length = 106172

 Score = 44.1 bits (22), Expect = 0.77
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 110   aggagtgaggagggagggaggg 131
             ||||||||||||||||||||||
Sbjct: 41531 aggagtgaggagggagggaggg 41552

>gb|AC130103.4| Rattus norvegicus  BAC CH230-41L20 (Children's Hospital Oakland
             Research Institute Rat (BN/SsNHsd/MCW) BAC library)
             complete sequence
          Length = 224716

 Score = 44.1 bits (22), Expect = 0.77
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 110   aggagtgaggagggagggaggg 131
             ||||||||||||||||||||||
Sbjct: 91541 aggagtgaggagggagggaggg 91520

>gb|AC102117.13| Mus musculus chromosome 7, clone RP23-154P9, complete sequence
          Length = 196717

 Score = 44.1 bits (22), Expect = 0.77
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 98    agagagggaccgaggagtgaggagggagggaggg 131
             |||||||||  |||||| ||||||||||||||||
Sbjct: 75358 agagagggagggaggagggaggagggagggaggg 75391

>ref|NM_001061941.1| Oryza sativa (japonica cultivar-group) Os05g0382400 (Os05g0382400)
           mRNA, complete cds
          Length = 1711

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 400 cgccgtcgtcctcgtccatggccgc 424
           ||||||| |||||||||||||||||
Sbjct: 733 cgccgtcctcctcgtccatggccgc 757

>ref|NM_001061940.1| Oryza sativa (japonica cultivar-group) Os05g0382500 (Os05g0382500)
           mRNA, complete cds
          Length = 1893

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 400 cgccgtcgtcctcgtccatggccgc 424
           ||||||| |||||||||||||||||
Sbjct: 934 cgccgtcctcctcgtccatggccgc 910

>emb|AM260479.1| Ralstonia eutropha H16 chromosome 1
          Length = 4052032

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 267    gcgcccccgccgcggccgccagcga 291
              |||||||||||||||||||| ||||
Sbjct: 454211 gcgcccccgccgcggccgccggcga 454187

>ref|XR_014466.1| PREDICTED: Macaca mulatta similar to G protein-coupled receptor 27
           (LOC720525), mRNA
          Length = 714

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 266 ggcgcccccgccgcggccgcc 286
           |||||||||||||||||||||
Sbjct: 266 ggcgcccccgccgcggccgcc 246

>gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088M05,
              complete sequence
          Length = 153368

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 400    cgccgtcgtcctcgtccatggccgc 424
              ||||||| |||||||||||||||||
Sbjct: 137221 cgccgtcctcctcgtccatggccgc 137197

>gb|AC133646.4| Mus musculus BAC clone RP23-254F11 from chromosome 18, complete
            sequence
          Length = 209764

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 111  ggagtgaggagggagggaggg 131
            |||||||||||||||||||||
Sbjct: 2004 ggagtgaggagggagggaggg 2024

>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 372    tattcatcgtcgtcaacgtcg 392
              |||||||||||||||||||||
Sbjct: 823142 tattcatcgtcgtcaacgtcg 823162

>gb|AC121886.2| Mus musculus BAC clone RP24-141K3 from 18, complete sequence
          Length = 140819

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 111    ggagtgaggagggagggaggg 131
              |||||||||||||||||||||
Sbjct: 106818 ggagtgaggagggagggaggg 106838

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 459     ccggccaccggcgcgcagcag 479
               |||||||||||||||||||||
Sbjct: 1143958 ccggccaccggcgcgcagcag 1143978

>gb|AY072796.1| Mus musculus chemokine receptor CCX CKR mRNA, complete cds
          Length = 2351

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 111 ggagtgaggagggagggaggg 131
           |||||||||||||||||||||
Sbjct: 364 ggagtgaggagggagggaggg 344

>gb|AC096970.2| Homo sapiens chromosome 3 clone RP11-321A23, complete sequence
          Length = 171297

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 266    ggcgcccccgccgcggccgcc 286
              |||||||||||||||||||||
Sbjct: 158980 ggcgcccccgccgcggccgcc 159000

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 400      cgccgtcgtcctcgtccatggccgc 424
                ||||||| |||||||||||||||||
Sbjct: 18344009 cgccgtcctcctcgtccatggccgc 18343985

>emb|BX571819.6| Zebrafish DNA sequence from clone CH211-105H3 in linkage group 24,
             complete sequence
          Length = 118635

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 740   atgtatcatgcatgtataatg 760
             |||||||||||||||||||||
Sbjct: 78163 atgtatcatgcatgtataatg 78143

>dbj|AK107158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-E10, full
           insert sequence
          Length = 1711

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 400 cgccgtcgtcctcgtccatggccgc 424
           ||||||| |||||||||||||||||
Sbjct: 733 cgccgtcctcctcgtccatggccgc 757

>dbj|AK107084.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G02, full
           insert sequence
          Length = 1893

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 400 cgccgtcgtcctcgtccatggccgc 424
           ||||||| |||||||||||||||||
Sbjct: 934 cgccgtcctcctcgtccatggccgc 910

>gb|AC156553.17| Mus musculus chromosome 8, clone RP23-106I21, complete sequence
          Length = 211915

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 110   aggagtgaggagggagggagg 130
             |||||||||||||||||||||
Sbjct: 13962 aggagtgaggagggagggagg 13942

>gb|AC114589.30| Mus musculus chromosome 8, clone RP23-365O13, complete sequence
          Length = 213866

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 110    aggagtgaggagggagggagg 130
              |||||||||||||||||||||
Sbjct: 187782 aggagtgaggagggagggagg 187762

>gb|AC145736.4| Mus musculus BAC clone RP24-296K18 from 9, complete sequence
          Length = 177964

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 111   ggagtgaggagggagggaggg 131
             |||||||||||||||||||||
Sbjct: 38069 ggagtgaggagggagggaggg 38089

>ref|NM_018971.1| Homo sapiens G protein-coupled receptor 27 (GPR27), mRNA
 dbj|AB040799.1| Homo sapiens mRNA for SREB1, complete cds
          Length = 1128

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 266 ggcgcccccgccgcggccgcc 286
           |||||||||||||||||||||
Sbjct: 266 ggcgcccccgccgcggccgcc 246


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 116,451,328
Number of extensions: 6342347
Number of successful extensions: 350399
Number of sequences better than 10.0: 37
Number of HSP's gapped: 350399
Number of HSP's successfully gapped: 47
Length of query: 812
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 790
Effective length of database: 18,508,616,841
Effective search space: 14621807304390
Effective search space used: 14621807304390
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)