ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf159m05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AY224520:Os06g0643300 | 295 | 3e-80 | 2 | AK104266:Os06g0643300 | 295 | 3e-80 | 3 | AK099061:Os06g0643300 | 295 | 3e-80 | 4 | AK061733:Os06g0643300 | 295 | 3e-80 | 5 | AK102553:Os06g0308300 | 32 | 0.70 | 6 | AK101549:Os06g0308300 | 32 | 0.70 | 7 | AK059211:Os06g0308300 | 32 | 0.70 | 8 | AK109924:Os11g0538400 | 31 | 1.6 | 9 | AK098870:Os04g0439900 | 28 | 7.7 | 10 | AK065119:Os04g0439900 | 28 | 7.7 | 11 | AK062578:Os04g0439900 | 28 | 7.7 |
|---|
>AY224520:Os06g0643300 | Length = 205 Score = 295 bits (755), Expect = 3e-80 Identities = 161/205 (78%), Positives = 165/205 (80%), Gaps = 1/205 (0%) Frame = +1 Query: 124 MGNPEKLMAQIFDLKFTSKSLQRQARKCXXXXXXXXXXXXXXXXXGNVDGARIYAENAIR 303 MGNPEKLM QIFDLKFTSKSLQRQARKC GN+DGARIYAENAIR Sbjct: 1 MGNPEKLMTQIFDLKFTSKSLQRQARKCEKEEKEQKLKVKKAIEKGNMDGARIYAENAIR 60 Query: 304 KRTEHMNYLRLASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKMSETMDN 483 KRTEHMNYLRLASRLDAVV+RLDTQAKMQ IGKSM NIVKSLDS+LATGNLQKMSETMDN Sbjct: 61 KRTEHMNYLRLASRLDAVVARLDTQAKMQVIGKSMANIVKSLDSALATGNLQKMSETMDN 120 Query: 484 FERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQ-XXXXXX 660 FERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQ Sbjct: 121 FERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQAAAHAIP 180 Query: 661 XXXXXXXXXXXXXLTRRLAELKARG 735 L+RRLAELKARG Sbjct: 181 AAKEKEKAVDEDDLSRRLAELKARG 205
>AK104266:Os06g0643300 | Length = 205 Score = 295 bits (755), Expect = 3e-80 Identities = 161/205 (78%), Positives = 165/205 (80%), Gaps = 1/205 (0%) Frame = +1 Query: 124 MGNPEKLMAQIFDLKFTSKSLQRQARKCXXXXXXXXXXXXXXXXXGNVDGARIYAENAIR 303 MGNPEKLM QIFDLKFTSKSLQRQARKC GN+DGARIYAENAIR Sbjct: 1 MGNPEKLMTQIFDLKFTSKSLQRQARKCEKEEKEQKLKVKKAIEKGNMDGARIYAENAIR 60 Query: 304 KRTEHMNYLRLASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKMSETMDN 483 KRTEHMNYLRLASRLDAVV+RLDTQAKMQ IGKSM NIVKSLDS+LATGNLQKMSETMDN Sbjct: 61 KRTEHMNYLRLASRLDAVVARLDTQAKMQVIGKSMANIVKSLDSALATGNLQKMSETMDN 120 Query: 484 FERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQ-XXXXXX 660 FERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQ Sbjct: 121 FERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQAAAHAIP 180 Query: 661 XXXXXXXXXXXXXLTRRLAELKARG 735 L+RRLAELKARG Sbjct: 181 AAKEKEKAVDEDDLSRRLAELKARG 205
>AK099061:Os06g0643300 | Length = 205 Score = 295 bits (755), Expect = 3e-80 Identities = 161/205 (78%), Positives = 165/205 (80%), Gaps = 1/205 (0%) Frame = +1 Query: 124 MGNPEKLMAQIFDLKFTSKSLQRQARKCXXXXXXXXXXXXXXXXXGNVDGARIYAENAIR 303 MGNPEKLM QIFDLKFTSKSLQRQARKC GN+DGARIYAENAIR Sbjct: 1 MGNPEKLMTQIFDLKFTSKSLQRQARKCEKEEKEQKLKVKKAIEKGNMDGARIYAENAIR 60 Query: 304 KRTEHMNYLRLASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKMSETMDN 483 KRTEHMNYLRLASRLDAVV+RLDTQAKMQ IGKSM NIVKSLDS+LATGNLQKMSETMDN Sbjct: 61 KRTEHMNYLRLASRLDAVVARLDTQAKMQVIGKSMANIVKSLDSALATGNLQKMSETMDN 120 Query: 484 FERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQ-XXXXXX 660 FERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQ Sbjct: 121 FERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQAAAHAIP 180 Query: 661 XXXXXXXXXXXXXLTRRLAELKARG 735 L+RRLAELKARG Sbjct: 181 AAKEKEKAVDEDDLSRRLAELKARG 205
>AK061733:Os06g0643300 | Length = 205 Score = 295 bits (755), Expect = 3e-80 Identities = 161/205 (78%), Positives = 165/205 (80%), Gaps = 1/205 (0%) Frame = +1 Query: 124 MGNPEKLMAQIFDLKFTSKSLQRQARKCXXXXXXXXXXXXXXXXXGNVDGARIYAENAIR 303 MGNPEKLM QIFDLKFTSKSLQRQARKC GN+DGARIYAENAIR Sbjct: 1 MGNPEKLMTQIFDLKFTSKSLQRQARKCEKEEKEQKLKVKKAIEKGNMDGARIYAENAIR 60 Query: 304 KRTEHMNYLRLASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKMSETMDN 483 KRTEHMNYLRLASRLDAVV+RLDTQAKMQ IGKSM NIVKSLDS+LATGNLQKMSETMDN Sbjct: 61 KRTEHMNYLRLASRLDAVVARLDTQAKMQVIGKSMANIVKSLDSALATGNLQKMSETMDN 120 Query: 484 FERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQ-XXXXXX 660 FERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQ Sbjct: 121 FERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQAAAHAIP 180 Query: 661 XXXXXXXXXXXXXLTRRLAELKARG 735 L+RRLAELKARG Sbjct: 181 AAKEKEKAVDEDDLSRRLAELKARG 205
>AK102553:Os06g0308300 | Length = 576 Score = 32.0 bits (71), Expect = 0.70 Identities = 23/93 (24%), Positives = 50/93 (53%), Gaps = 4/93 (4%) Frame = +1 Query: 346 LDAVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKMSETMDNFERQFVNMEVQAEF 525 L ++S L +A + K+ G I + L + T L+K+++ + R+FVN++ Q + Sbjct: 68 LARLLSALGEKAIARTPEKTSGTIKQQLAAIAPT--LEKLNKQKNERVREFVNVQSQIDQ 125 Query: 526 MEGAMAGST----SLSTPETEVNSLMQQVADDY 612 + G +AG+T ++TP+ + L + +++ Sbjct: 126 ICGEIAGTTEVGEKVATPQVNEDDLTLERLEEF 158
>AK101549:Os06g0308300 | Length = 615 Score = 32.0 bits (71), Expect = 0.70 Identities = 23/93 (24%), Positives = 50/93 (53%), Gaps = 4/93 (4%) Frame = +1 Query: 346 LDAVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKMSETMDNFERQFVNMEVQAEF 525 L ++S L +A + K+ G I + L + T L+K+++ + R+FVN++ Q + Sbjct: 107 LARLLSALGEKAIARTPEKTSGTIKQQLAAIAPT--LEKLNKQKNERVREFVNVQSQIDQ 164 Query: 526 MEGAMAGST----SLSTPETEVNSLMQQVADDY 612 + G +AG+T ++TP+ + L + +++ Sbjct: 165 ICGEIAGTTEVGEKVATPQVNEDDLTLERLEEF 197
>AK059211:Os06g0308300 | Length = 519 Score = 32.0 bits (71), Expect = 0.70 Identities = 23/93 (24%), Positives = 50/93 (53%), Gaps = 4/93 (4%) Frame = +1 Query: 346 LDAVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKMSETMDNFERQFVNMEVQAEF 525 L ++S L +A + K+ G I + L + T L+K+++ + R+FVN++ Q + Sbjct: 107 LARLLSALGEKAIARTPEKTSGTIKQQLAAIAPT--LEKLNKQKNERVREFVNVQSQIDQ 164 Query: 526 MEGAMAGST----SLSTPETEVNSLMQQVADDY 612 + G +AG+T ++TP+ + L + +++ Sbjct: 165 ICGEIAGTTEVGEKVATPQVNEDDLTLERLEEF 197
>AK109924:Os11g0538400 | Length = 610 Score = 30.8 bits (68), Expect = 1.6 Identities = 16/27 (59%), Positives = 17/27 (62%), Gaps = 3/27 (11%) Frame = +3 Query: 390 GHRKVHGQHRQVARLL---PRHRQPPE 461 G R VHG HRQ A LL PR R PP+ Sbjct: 522 GERDVHGGHRQPAPLLPQPPRPRAPPQ 548
>AK098870:Os04g0439900 | Length = 429 Score = 28.5 bits (62), Expect = 7.7 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 5/67 (7%) Frame = +1 Query: 421 KSLDSSLATGNLQ---KMSETMDNFERQFVNMEVQAEFMEGAMAGST--SLSTPETEVNS 585 K L SSL T +++ K SETM++ E++ + EG+ +G+T S S P V++ Sbjct: 225 KELQSSLETVDVKSESKQSETMEDTEQKAPTNGTAFKMNEGSASGTTESSNSGPMLSVDT 284 Query: 586 LMQQVAD 606 + + + D Sbjct: 285 IEKMMED 291
>AK065119:Os04g0439900 | Length = 429 Score = 28.5 bits (62), Expect = 7.7 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 5/67 (7%) Frame = +1 Query: 421 KSLDSSLATGNLQ---KMSETMDNFERQFVNMEVQAEFMEGAMAGST--SLSTPETEVNS 585 K L SSL T +++ K SETM++ E++ + EG+ +G+T S S P V++ Sbjct: 225 KELQSSLETVDVKSESKQSETMEDTEQKAPTNGTAFKMNEGSASGTTESSNSGPMLSVDT 284 Query: 586 LMQQVAD 606 + + + D Sbjct: 285 IEKMMED 291
>AK062578:Os04g0439900 | Length = 429 Score = 28.5 bits (62), Expect = 7.7 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 5/67 (7%) Frame = +1 Query: 421 KSLDSSLATGNLQ---KMSETMDNFERQFVNMEVQAEFMEGAMAGST--SLSTPETEVNS 585 K L SSL T +++ K SETM++ E++ + EG+ +G+T S S P V++ Sbjct: 225 KELQSSLETVDVKSESKQSETMEDTEQKAPTNGTAFKMNEGSASGTTESSNSGPMLSVDT 284 Query: 586 LMQQVAD 606 + + + D Sbjct: 285 IEKMMED 291 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 14,838,044 Number of extensions: 235557 Number of successful extensions: 767 Number of sequences better than 10.0: 11 Number of HSP's gapped: 759 Number of HSP's successfully gapped: 11 Length of query: 331 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 230 Effective length of database: 11,355,714 Effective search space: 2611814220 Effective search space used: 2611814220 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
