>Q7LBR1:CHM1B_HUMAN Charged multivesicular body protein 1b - Homo sapiens (Human)|
          Length = 199
 Score =  146 bits (369), Expect = 1e-34
 Identities = 73/173 (42%), Positives = 116/173 (67%)
 Frame = +1

Query: 124 MGNPEKLMAQIFDLKFTSKSLQRQARKCXXXXXXXXXXXXXXXXXGNVDGARIYAENAIR 303
           M N EK    +F+LKF +K L R A+KC                 GN++ ARI+AENAIR
Sbjct: 1   MSNMEK---HLFNLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIR 57

Query: 304 KRTEHMNYLRLASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKMSETMDN 483
           ++ + +N+LR+++R+DAV +R+ T   M  + KSM  +VKS+D++L T NL+K+S  MD 
Sbjct: 58  QKNQAVNFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDK 117

Query: 484 FERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQ 642
           FE QF  ++VQ + ME  M+ +T+L+TP+ +V+ L+Q++AD+ GL++++ LPQ
Sbjct: 118 FEHQFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQ 170

>Q5E994:CHM1B_BOVIN Charged multivesicular body protein 1b - Bos taurus (Bovine)|
          Length = 199

 Score =  145 bits (365), Expect = 3e-34
 Identities = 73/173 (42%), Positives = 116/173 (67%)
 Frame = +1

Query: 124 MGNPEKLMAQIFDLKFTSKSLQRQARKCXXXXXXXXXXXXXXXXXGNVDGARIYAENAIR 303
           M N EK    +F+LKF +K L R A+KC                 GN++ ARI+AENAIR
Sbjct: 1   MSNMEK---HLFNLKFAAKELGRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIR 57

Query: 304 KRTEHMNYLRLASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKMSETMDN 483
           ++ + +N+LR+++R+DAV +R+ T   M  + KSM  +VKS+D++L T NL+K+S  MD 
Sbjct: 58  QKNQAVNFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDK 117

Query: 484 FERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQ 642
           FE QF  ++VQ + ME  M+ +T+L+TP+ +V+ L+Q++AD+ GL++++ LPQ
Sbjct: 118 FEHQFETLDVQTQQMEDTMSSTTTLTTPQGQVDMLLQEMADEAGLDLNMELPQ 170

>Q9CQD4:CH1B2_MOUSE Charged multivesicular body protein 1b-2 - Mus musculus (Mouse)|
          Length = 199

 Score =  144 bits (364), Expect = 4e-34
 Identities = 72/173 (41%), Positives = 115/173 (66%)
 Frame = +1

Query: 124 MGNPEKLMAQIFDLKFTSKSLQRQARKCXXXXXXXXXXXXXXXXXGNVDGARIYAENAIR 303
           M N EK    +F+LKF +K L R A+KC                 GN + ARI+AENAIR
Sbjct: 1   MSNMEK---HLFNLKFAAKELNRNAKKCDKEEKAEKAKIKKAIQKGNTEVARIHAENAIR 57

Query: 304 KRTEHMNYLRLASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKMSETMDN 483
           ++ + +N+LR+++R+DAV +R+ T   M  + KSM  +VKS+D++L + NL+K+S  MD 
Sbjct: 58  QKNQAINFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLRSMNLEKISALMDK 117

Query: 484 FERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQ 642
           FE QF  ++VQ + ME  M+ +T+L+TP+ +V+ L+Q++AD+ GL++++ LPQ
Sbjct: 118 FEHQFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQ 170

>Q99LU0:CH1B1_MOUSE Charged multivesicular body protein 1b-1 - Mus musculus (Mouse)|
          Length = 199

 Score =  144 bits (362), Expect = 7e-34
 Identities = 71/173 (41%), Positives = 116/173 (67%)
 Frame = +1

Query: 124 MGNPEKLMAQIFDLKFTSKSLQRQARKCXXXXXXXXXXXXXXXXXGNVDGARIYAENAIR 303
           M N EK    +F+LKF +K L R ++KC                 GN++ ARI+AENAIR
Sbjct: 1   MSNMEK---HLFNLKFAAKELNRSSKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIR 57

Query: 304 KRTEHMNYLRLASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKMSETMDN 483
           ++ + +N+LR+++R+DAV +R+ T   M  + KSM  +VKS+D++L + NL+K+S  MD 
Sbjct: 58  QKNQGVNFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKSMNLEKISALMDK 117

Query: 484 FERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQ 642
           FE QF  ++VQ + ME  M+ +T+L+TP+ +V+ L+Q++AD+ GL++++ LPQ
Sbjct: 118 FEHQFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQ 170

>Q5ZKX1:CHM1B_CHICK Charged multivesicular body protein 1b - Gallus gallus (Chicken)|
          Length = 199

 Score =  143 bits (360), Expect = 1e-33
 Identities = 70/173 (40%), Positives = 116/173 (67%)
 Frame = +1

Query: 124 MGNPEKLMAQIFDLKFTSKSLQRQARKCXXXXXXXXXXXXXXXXXGNVDGARIYAENAIR 303
           M N EK    +F+LKF +K L R +++C                 GN++ ARI+AENAIR
Sbjct: 1   MSNMEK---HLFNLKFAAKELNRNSKRCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIR 57

Query: 304 KRTEHMNYLRLASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKMSETMDN 483
           ++ + +N+LR+++R+DAV +R+ T   M  + KSM  +VKS+D++L + NL+K+S  MD 
Sbjct: 58  QKNQAINFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKSMNLEKISALMDK 117

Query: 484 FERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQ 642
           FE QF  ++VQ + ME  M+ +T+L+TP+ +V+ L+Q++AD+ GL++++ LPQ
Sbjct: 118 FEHQFETLDVQTQQMENTMSNTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQ 170

>Q5R605:CHM1A_PONPY Charged multivesicular body protein 1a - Pongo pygmaeus (Orangutan)|
          Length = 196

 Score =  142 bits (359), Expect = 2e-33
 Identities = 76/191 (39%), Positives = 116/191 (60%)
 Frame = +1

Query: 154 IFDLKFTSKSLQRQARKCXXXXXXXXXXXXXXXXXGNVDGARIYAENAIRKRTEHMNYLR 333
           +F LKFT+K L++ A+K                   NV+ AR+YAENAIRK+ E +N+LR
Sbjct: 5   LFQLKFTAKQLEKLAKKAEKDSKAEQAKVKKALLQKNVECARVYAENAIRKKNEGVNWLR 64

Query: 334 LASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKMSETMDNFERQFVNMEV 513
           +ASR+DAV S++ T   M+ + K+M  + K+LD +L+T +LQK+S  MD FE+Q  N++V
Sbjct: 65  MASRVDAVASKVQTAVTMKGVTKNMAQVTKALDKALSTMDLQKVSSVMDRFEQQVQNLDV 124

Query: 514 QAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQXXXXXXXXXXXXXXXXX 693
               ME +M+ +T+L+TP+ +V+SL+ Q+A++ GLEV   L Q                 
Sbjct: 125 HTSVMEDSMSSATTLTTPQEQVDSLIMQIAEENGLEVLDQLSQLPEGASAVGESSVRSQE 184

Query: 694 XXLTRRLAELK 726
             L+RRLA L+
Sbjct: 185 DQLSRRLAALR 195

>Q9HD42:CHM1A_HUMAN Charged multivesicular body protein 1a - Homo sapiens (Human)|
          Length = 196

 Score =  142 bits (359), Expect = 2e-33
 Identities = 76/191 (39%), Positives = 116/191 (60%)
 Frame = +1

Query: 154 IFDLKFTSKSLQRQARKCXXXXXXXXXXXXXXXXXGNVDGARIYAENAIRKRTEHMNYLR 333
           +F LKFT+K L++ A+K                   NV+ AR+YAENAIRK+ E +N+LR
Sbjct: 5   LFQLKFTAKQLEKLAKKAEKDSKAEQAKVKKALLQKNVECARVYAENAIRKKNEGVNWLR 64

Query: 334 LASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKMSETMDNFERQFVNMEV 513
           +ASR+DAV S++ T   M+ + K+M  + K+LD +L+T +LQK+S  MD FE+Q  N++V
Sbjct: 65  MASRVDAVASKVQTAVTMKGVTKNMAQVTKALDKALSTMDLQKVSSVMDRFEQQVQNLDV 124

Query: 514 QAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQXXXXXXXXXXXXXXXXX 693
               ME +M+ +T+L+TP+ +V+SL+ Q+A++ GLEV   L Q                 
Sbjct: 125 HTSVMEDSMSSATTLTTPQEQVDSLIMQIAEENGLEVLDQLSQLPEGASAVGESSVRSQE 184

Query: 694 XXLTRRLAELK 726
             L+RRLA L+
Sbjct: 185 DQLSRRLAALR 195

>Q7SZB5:CHM1B_XENLA Charged multivesicular body protein 1b - Xenopus laevis (African|
           clawed frog)
          Length = 199

 Score =  142 bits (358), Expect = 2e-33
 Identities = 68/163 (41%), Positives = 111/163 (68%)
 Frame = +1

Query: 154 IFDLKFTSKSLQRQARKCXXXXXXXXXXXXXXXXXGNVDGARIYAENAIRKRTEHMNYLR 333
           +F+LKF +K L R A+KC                 GN + ARI+AENAIR++ + +N+LR
Sbjct: 8   LFNLKFAAKELNRNAKKCEKEEKTEKAKIKKAIQKGNTEIARIHAENAIRQKNQGINFLR 67

Query: 334 LASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKMSETMDNFERQFVNMEV 513
           +++R+DAV +R+ T   M  + KSM  +VKS+D++L + NL+K+S  MD FE QF  ++V
Sbjct: 68  MSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKSMNLEKISALMDKFEHQFETLDV 127

Query: 514 QAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQ 642
           Q + ME  M+ +T+L+TP+ +V++L+ ++AD+ GL++S+ LPQ
Sbjct: 128 QTQQMEDTMSNTTTLTTPQNQVDNLLHEMADEAGLDLSMELPQ 170

>Q7ZVB1:CHM1B_DANRE Charged multivesicular body protein 1b - Danio rerio (Zebrafish)|
           (Brachydanio rerio)
          Length = 199

 Score =  142 bits (357), Expect = 3e-33
 Identities = 67/163 (41%), Positives = 113/163 (69%)
 Frame = +1

Query: 154 IFDLKFTSKSLQRQARKCXXXXXXXXXXXXXXXXXGNVDGARIYAENAIRKRTEHMNYLR 333
           +F+LKF +K LQR ++KC                 GN++ ARI+AENAIR++ + +N+LR
Sbjct: 8   LFNLKFAAKELQRNSKKCDKEEKAEKVKVKKAIQKGNMEVARIHAENAIRQKNQSVNFLR 67

Query: 334 LASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKMSETMDNFERQFVNMEV 513
           +++R+DAV +R+ T   M  + KSM  +VK +D++L + NL+K+S  M+ FERQF  ++V
Sbjct: 68  MSARVDAVAARVQTAVTMNQVTKSMAGVVKGMDATLKSMNLEKISGLMEKFERQFETLDV 127

Query: 514 QAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQ 642
           Q   ME +M+ +T+L+TP+ +V++LM ++AD+ GL++++ LPQ
Sbjct: 128 QTAQMEDSMSSTTTLTTPQGQVDTLMMEMADEAGLDLNMELPQ 170

>Q6DF27:CHM1B_XENTR Charged multivesicular body protein 1b - Xenopus tropicalis|
           (Western clawed frog) (Silurana tropicalis)
          Length = 199

 Score =  141 bits (355), Expect = 5e-33
 Identities = 67/163 (41%), Positives = 111/163 (68%)
 Frame = +1

Query: 154 IFDLKFTSKSLQRQARKCXXXXXXXXXXXXXXXXXGNVDGARIYAENAIRKRTEHMNYLR 333
           +F+LKF +K L R A+KC                 GN + ARI+AENAIR++ + +N+LR
Sbjct: 8   LFNLKFAAKELHRNAKKCEKEEKTEKAKIKKAIQKGNTEIARIHAENAIRQKNQGINFLR 67

Query: 334 LASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKMSETMDNFERQFVNMEV 513
           +++R+DAV +R+ T   M  + KSM  +VKS+D++L + NL+K+S  MD FE QF  ++V
Sbjct: 68  MSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDTTLKSMNLEKISALMDKFEHQFETLDV 127

Query: 514 QAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQ 642
           Q + ME  M+ +T+L+TP+ +V++L+ ++AD+ GL++++ LPQ
Sbjct: 128 QTQQMEDTMSNTTTLTTPQNQVDNLLHEMADEAGLDLNMELPQ 170

>Q6PHF0:CHM1A_DANRE Charged multivesicular body protein 1a - Danio rerio (Zebrafish)|
           (Brachydanio rerio)
          Length = 198

 Score =  138 bits (348), Expect = 3e-32
 Identities = 71/163 (43%), Positives = 106/163 (65%)
 Frame = +1

Query: 154 IFDLKFTSKSLQRQARKCXXXXXXXXXXXXXXXXXGNVDGARIYAENAIRKRTEHMNYLR 333
           +F LKFTSK L+R A+K                   NV+ AR+YAENAIRK+ E +N+LR
Sbjct: 5   LFQLKFTSKQLERLAKKAEKDSKSEQAKVKKALQQKNVECARVYAENAIRKKNEGLNWLR 64

Query: 334 LASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKMSETMDNFERQFVNMEV 513
           +ASR+DAV S++ T   M+ + K+M  + K+LD +L++ +LQK+S  MD FE Q  N++V
Sbjct: 65  MASRVDAVASKVQTALTMKGVAKNMTQVTKALDKALSSMDLQKVSAVMDKFETQVQNLDV 124

Query: 514 QAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQ 642
               ME +M+ +T+LSTP+ +V+ L+ Q+A++ GLEV   L Q
Sbjct: 125 HTSVMEDSMSSATTLSTPQQQVDDLILQIAEESGLEVEDQLSQ 167

>Q921W0:CHM1A_MOUSE Charged multivesicular body protein 1a - Mus musculus (Mouse)|
          Length = 196

 Score =  138 bits (347), Expect = 4e-32
 Identities = 74/191 (38%), Positives = 115/191 (60%)
 Frame = +1

Query: 154 IFDLKFTSKSLQRQARKCXXXXXXXXXXXXXXXXXGNVDGARIYAENAIRKRTEHMNYLR 333
           +F LKFT+K L++ A+K                   NV+ AR+YAENAIRK+ E +N+LR
Sbjct: 5   LFQLKFTAKQLEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGVNWLR 64

Query: 334 LASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKMSETMDNFERQFVNMEV 513
           +ASR+DAV S++ T   M+ + K+M  + K+LD +L+  +LQK+S  MD FE+Q  N++V
Sbjct: 65  MASRVDAVASKVQTAVTMKGVTKNMAQVTKALDKALSAMDLQKVSAVMDRFEQQVQNLDV 124

Query: 514 QAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQXXXXXXXXXXXXXXXXX 693
               ME +++ +T+L+TP+ +V+SL+ Q+A++ GLEV   L Q                 
Sbjct: 125 HTSVMEDSVSSATTLTTPQEQVDSLIVQIAEENGLEVLDQLSQLPEGASAVGESSVRSQE 184

Query: 694 XXLTRRLAELK 726
             L+RRLA L+
Sbjct: 185 DQLSRRLAALR 195

>Q6NUD8:CHM1A_XENLA Charged multivesicular body protein 1a - Xenopus laevis (African|
           clawed frog)
          Length = 196

 Score =  136 bits (342), Expect = 2e-31
 Identities = 72/191 (37%), Positives = 115/191 (60%)
 Frame = +1

Query: 154 IFDLKFTSKSLQRQARKCXXXXXXXXXXXXXXXXXGNVDGARIYAENAIRKRTEHMNYLR 333
           +F LKFT+K L++ A+K                   NV+ AR+YAENAIRK+ E +N+LR
Sbjct: 5   LFQLKFTAKQLEKLAKKAEKDSNTEQAKVKKALQQKNVEVARVYAENAIRKKNEGLNWLR 64

Query: 334 LASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKMSETMDNFERQFVNMEV 513
           +ASR+DAV S++ T   M+ + K+M  + K+LD +L++ +LQK+S  MD F++Q  N++V
Sbjct: 65  MASRVDAVASKVQTAVTMKGVTKNMAQVTKALDKALSSMDLQKVSAVMDKFDQQVQNLDV 124

Query: 514 QAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQXXXXXXXXXXXXXXXXX 693
               ME +M+ + +L+TP+ +V++L+ Q+A++ GLEV   L Q                 
Sbjct: 125 HTSVMEDSMSSAMTLTTPQEQVDNLIVQIAEENGLEVMDQLNQLPQGASSVGESSTRTQE 184

Query: 694 XXLTRRLAELK 726
             L+RRLA L+
Sbjct: 185 DQLSRRLASLR 195

>P69771:DID2_YEAST Vacuolar protein sorting-associated protein 46 - Saccharomyces|
           cerevisiae (Baker's yeast)
          Length = 204

 Score =  110 bits (274), Expect = 1e-23
 Identities = 60/157 (38%), Positives = 89/157 (56%)
 Frame = +1

Query: 154 IFDLKFTSKSLQRQARKCXXXXXXXXXXXXXXXXXGNVDGARIYAENAIRKRTEHMNYLR 333
           +F LKFTSK LQ+QA K                   N D +RIYA NAIRK+ E +  L+
Sbjct: 13  LFQLKFTSKQLQKQANKASKEEKQETNKLKRALNE-NEDISRIYASNAIRKKNERLQLLK 71

Query: 334 LASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKMSETMDNFERQFVNMEV 513
           LASR+D+V SR+ T   M+ +  SMG + K +D +L   NLQ+++  MD FE+QF +++ 
Sbjct: 72  LASRVDSVASRVQTAVTMRQVSASMGQVCKGMDKALQNMNLQQITMIMDKFEQQFEDLDT 131

Query: 514 QAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEV 624
                E     S ++     +V+ LM +VAD+ G+E+
Sbjct: 132 SVNVYEDMGVNSDAMLVDNDKVDELMSKVADENGMEL 168

>O14177:YDS1_SCHPO Uncharacterized protein C4F8.01 - Schizosaccharomyces pombe|
           (Fission yeast)
          Length = 210

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 42/168 (25%), Positives = 70/168 (41%)
 Frame = +1

Query: 136 EKLMAQIFDLKFTSKSLQRQARKCXXXXXXXXXXXXXXXXXGNVDGARIYAENAIRKRTE 315
           E+L A    L    + L R+  K                  GN   ARI A + +R R  
Sbjct: 16  EQLRAHQRSLGRAERELDRERTKLDQRERALIQEIKGSAKAGNTGAARIQARDLMRLRNS 75

Query: 316 HMNYLRLASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKMSETMDNFERQ 495
               +   ++L A+  RL T    + + +SM    + L     + N+  M+     FER+
Sbjct: 76  RKKMMNAKTQLQAISLRLQTMRTSEQMMQSMRGATRLLTGMNKSMNIPAMARITQQFERE 135

Query: 496 FVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLP 639
              ME + E ++  M  +      E E + L+ +V D+ G+++S GLP
Sbjct: 136 NEIMEQRQEMIDENMDDALE-EDDEEEADELVNKVLDEIGVDLSQGLP 182

>Q6NVL7:CHM2B_XENTR Charged multivesicular body protein 2b - Xenopus tropicalis|
           (Western clawed frog) (Silurana tropicalis)
          Length = 214

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 27/123 (21%), Positives = 60/123 (48%)
 Frame = +1

Query: 259 GNVDGARIYAENAIRKRTEHMNYLRLASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSS 438
           GN D  R+ A+  ++ R +      ++S++ ++ ++    +    +  +M    K++ + 
Sbjct: 53  GNKDACRVLAKQLVQLRKQKTRTYAVSSKVTSMSTQTKVMSSQMKMAGAMSTTAKTMQAV 112

Query: 439 LATGNLQKMSETMDNFERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGL 618
               + QK  +TM NF+++ + ME+  E +   +      S  E E   ++ QV D+ G+
Sbjct: 113 NKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDASDDEEESQDIVNQVLDEIGI 172

Query: 619 EVS 627
           E+S
Sbjct: 173 EIS 175

>Q66IV6:CH2BB_XENLA Charged multivesicular body protein 2b-B - Xenopus laevis (African|
           clawed frog)
          Length = 214

 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 27/123 (21%), Positives = 60/123 (48%)
 Frame = +1

Query: 259 GNVDGARIYAENAIRKRTEHMNYLRLASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSS 438
           GN D  R+ A+  ++ R +      ++S++ ++ ++    +    +  +M    K++ + 
Sbjct: 53  GNKDACRVLAKQLVQLRKQKTRTYAVSSKVTSMSTQTKVMSSQMKMAGAMSTTAKTMQAV 112

Query: 439 LATGNLQKMSETMDNFERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGL 618
               + QK  +TM NF+++ + ME+  E +   +      S  E E   ++ QV D+ G+
Sbjct: 113 NKKMDPQKTLQTMQNFQKENMKMEMTDEMINDTLDDIFDASEDEEESQDIVNQVLDEIGI 172

Query: 619 EVS 627
           E+S
Sbjct: 173 EIS 175

>Q7SYR0:CH2BA_XENLA Charged multivesicular body protein 2b-A - Xenopus laevis (African|
           clawed frog)
          Length = 214

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 26/123 (21%), Positives = 60/123 (48%)
 Frame = +1

Query: 259 GNVDGARIYAENAIRKRTEHMNYLRLASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSS 438
           GN D  ++ A+  ++ R +      ++S++ ++ ++    +    +  +M    K++ + 
Sbjct: 53  GNKDACKVLAKQLVQLRKQKTRTYAVSSKVTSMSTQTKVMSSQMKMAGAMSTTAKTMQAV 112

Query: 439 LATGNLQKMSETMDNFERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGL 618
               + QK  +TM NF+++ + ME+  E +   +      S  E E   ++ QV D+ G+
Sbjct: 113 NKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDASEDEEESQDIVNQVLDEIGI 172

Query: 619 EVS 627
           E+S
Sbjct: 173 EIS 175

>Q8BJF9:CHM2B_MOUSE Charged multivesicular body protein 2b - Mus musculus (Mouse)|
          Length = 213

 Score = 50.1 bits (118), Expect = 1e-05
 Identities = 26/123 (21%), Positives = 58/123 (47%)
 Frame = +1

Query: 259 GNVDGARIYAENAIRKRTEHMNYLRLASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSS 438
           GN +  R+ A+  +  R +      ++S++ ++ ++         +  +M    K++ + 
Sbjct: 53  GNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAV 112

Query: 439 LATGNLQKMSETMDNFERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGL 618
               + QK  +TM NF+++ + ME+  E +   +      S  E E   ++ QV D+ G+
Sbjct: 113 NKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGI 172

Query: 619 EVS 627
           E+S
Sbjct: 173 EIS 175

>Q3SX42:CHM2B_BOVIN Charged multivesicular body protein 2b - Bos taurus (Bovine)|
          Length = 213

 Score = 50.1 bits (118), Expect = 1e-05
 Identities = 26/123 (21%), Positives = 58/123 (47%)
 Frame = +1

Query: 259 GNVDGARIYAENAIRKRTEHMNYLRLASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSS 438
           GN +  R+ A+  +  R +      ++S++ ++ ++         +  +M    K++ + 
Sbjct: 53  GNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAV 112

Query: 439 LATGNLQKMSETMDNFERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGL 618
               + QK  +TM NF+++ + ME+  E +   +      S  E E   ++ QV D+ G+
Sbjct: 113 NKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGI 172

Query: 619 EVS 627
           E+S
Sbjct: 173 EIS 175

>Q5F3A2:CHM2B_CHICK Charged multivesicular body protein 2b - Gallus gallus (Chicken)|
          Length = 214

 Score = 49.7 bits (117), Expect = 2e-05
 Identities = 25/123 (20%), Positives = 59/123 (47%)
 Frame = +1

Query: 259 GNVDGARIYAENAIRKRTEHMNYLRLASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSS 438
           GN +  ++ A+  ++ R +      ++S++ ++ ++         +  +M    K++ + 
Sbjct: 53  GNKEACKVLAKQLVQLRKQKNRTYAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAV 112

Query: 439 LATGNLQKMSETMDNFERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGL 618
               + QK  +TM NF+++ + ME+  E +   +      S  E E   ++ QV D+ G+
Sbjct: 113 NKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDASDEEEESQDIVNQVLDEIGI 172

Query: 619 EVS 627
           E+S
Sbjct: 173 EIS 175

>Q5RAV2:CHM2B_PONPY Charged multivesicular body protein 2b - Pongo pygmaeus (Orangutan)|
          Length = 213

 Score = 48.9 bits (115), Expect = 3e-05
 Identities = 25/123 (20%), Positives = 58/123 (47%)
 Frame = +1

Query: 259 GNVDGARIYAENAIRKRTEHMNYLRLASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSS 438
           GN +  ++ A+  +  R +      ++S++ ++ ++         +  +M    K++ + 
Sbjct: 53  GNKEACKVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAV 112

Query: 439 LATGNLQKMSETMDNFERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGL 618
               + QK  +TM NF+++ + ME+  E +   +      S  E E   ++ QV D+ G+
Sbjct: 113 NKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGI 172

Query: 619 EVS 627
           E+S
Sbjct: 173 EIS 175

>Q9UQN3:CHM2B_HUMAN Charged multivesicular body protein 2b - Homo sapiens (Human)|
          Length = 213

 Score = 48.9 bits (115), Expect = 3e-05
 Identities = 25/123 (20%), Positives = 58/123 (47%)
 Frame = +1

Query: 259 GNVDGARIYAENAIRKRTEHMNYLRLASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSS 438
           GN +  ++ A+  +  R +      ++S++ ++ ++         +  +M    K++ + 
Sbjct: 53  GNKEACKVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAV 112

Query: 439 LATGNLQKMSETMDNFERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGL 618
               + QK  +TM NF+++ + ME+  E +   +      S  E E   ++ QV D+ G+
Sbjct: 113 NKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGI 172

Query: 619 EVS 627
           E+S
Sbjct: 173 EIS 175

>P36108:DID4_YEAST DOA4-independent degradation protein 4 - Saccharomyces cerevisiae|
           (Baker's yeast)
          Length = 232

 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 36/165 (21%), Positives = 69/165 (41%), Gaps = 1/165 (0%)
 Frame = +1

Query: 136 EKLMAQIFDLKFTSKSLQRQARKCXXXXXXXXXXXXXXXXXGNVDGARIYAENAIRKRTE 315
           E+L      L+ T + L+R+ RK                  G V  A++ A++ +R R  
Sbjct: 16  ERLKKNQRALERTQRELEREKRKLELQDKKLVSEIKKSAKNGQVAAAKVQAKDLVRTRNY 75

Query: 316 HMNYLRLASRLDAVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKMSETMDNFERQ 495
              +  + ++L A+  R+        + +SM      L     T NL ++      FE+Q
Sbjct: 76  IQKFDNMKAQLQAISLRIQAVRSSDQMTRSMSEATGLLAGMNRTMNLPQLQRISMEFEKQ 135

Query: 496 FVNMEVQAEFMEGAMAGSTSLSTPE-TEVNSLMQQVADDYGLEVS 627
              M  + EFM+ A+         E  E + ++ +V D+ G++++
Sbjct: 136 SDLMGQRQEFMDEAIDNVMGDEVDEDEEADEIVNKVLDEIGVDLN 180

>O29209:Y1053_ARCFU Uncharacterized protein AF_1053 - Archaeoglobus fulgidus|
          Length = 269

 Score = 31.2 bits (69), Expect = 6.8
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
 Frame = +1

Query: 352 AVVSRLDTQAKMQAIGKSMGNIVKSLDSSLATGNLQKM----SETMDNFERQFVNMEVQA 519
           A +  +   A+       +  + K LD  +  G+++K+     ET++N E  F N++  A
Sbjct: 6   AAIDEILASAEADTAEGRIDRLEKELD--VLKGSVKKLLLDLRETLNNLENPFQNLQNLA 63

Query: 520 EFMEGAMAGSTSLSTPETEV 579
           E   GA+AG  S   P+ +V
Sbjct: 64  E---GALAGGASYQPPQIQV 80


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 89,764,193
Number of extensions: 1368939
Number of successful extensions: 4167
Number of sequences better than 10.0: 25
Number of HSP's gapped: 4157
Number of HSP's successfully gapped: 25
Length of query: 331
Length of database: 100,686,439
Length adjustment: 114
Effective length of query: 217
Effective length of database: 69,416,809
Effective search space: 15063447553
Effective search space used: 15063447553
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)