ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf162c13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001061331.1| Oryza sativa (japonica cultivar-group) Os05g... 70 3e-08
2gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome... 70 3e-08
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 70 3e-08
4ref|NM_001061330.1| Oryza sativa (japonica cultivar-group) Os05g... 62 7e-06
5ref|NM_001061329.1| Oryza sativa (japonica cultivar-group) Os05g... 62 7e-06
6dbj|AK064652.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 7e-06
7dbj|AK064399.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 7e-06
8ref|NM_001061321.1| Oryza sativa (japonica cultivar-group) Os05g... 50 0.027
9gb|AC135426.2| Oryza sativa (japonica cultivar-group) chromosome... 50 0.027
10dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.11
11dbj|AP006753.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.11
12dbj|AP003811.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.11
13gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete ge... 44 1.7
14gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete s... 44 1.7
15gb|AC016368.3| Drosophila melanogaster clone BACR36A03, complete... 44 1.7
16gb|AC008257.6| Drosophila melanogaster clone BACR08A11, complete... 44 1.7
17ref|XM_818259.1| Trypanosoma brucei TREU927 CYC2-like cyclin (Tb... 44 1.7
18gb|AY157030.2| Trypanosoma brucei putative G1 cyclin CycE4 mRNA,... 44 1.7
19gb|AC105337.7| Homo sapiens chromosome 17, clone CTD-2116F7, com... 44 1.7
20emb|AL646016.8| Human DNA sequence from clone RP11-90L13 on chro... 44 1.7
21gb|AF228315.1|AF228315 Drosophila melanogaster phospholipase D g... 44 1.7
22emb|AL844482.6| Mouse DNA sequence from clone RP23-81A18 on chro... 44 1.7
23emb|AJ496593.1|TBR496593 Trypanosoma brucei CYC5 gene for cyclin 5 44 1.7
24gb|AC191223.2| Gallus gallus BAC clone CH261-26B9 from chromosom... 42 6.7
25emb|CT831244.1| Oryza sativa (indica cultivar-group) cDNA clone:... 42 6.7
26gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome 42 6.7
27ref|NM_001053747.1| Oryza sativa (japonica cultivar-group) Os02g... 42 6.7
28gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete s... 42 6.7
29emb|CR318605.17| Zebrafish DNA sequence from clone DKEY-109C12 i... 42 6.7
30gb|BT017471.1| Zea mays clone EL01N0408D01.c mRNA sequence 42 6.7
31gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 42 6.7
32dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 42 6.7
33gb|AC162903.3| Mus musculus BAC clone RP24-68D13 from chromosome... 42 6.7
34emb|CT009489.6| Mouse DNA sequence from clone RP23-97F8 on chrom... 42 6.7
35gb|AC006586.10| Arabidopsis thaliana chromosome 2 clone F7B19 ma... 42 6.7
36gb|AC006219.10| Arabidopsis thaliana chromosome 2 clone T14C8 ma... 42 6.7
37dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 6.7
38emb|AL135918.6| Human DNA sequence from clone RP1-89K8 on chromo... 42 6.7
39emb|AL035668.15|HS859D4 Human DNA sequence from clone RP5-859D4 ... 42 6.7
40emb|BX548069.7| Zebrafish DNA sequence from clone CH211-238G23 i... 42 6.7
41gb|AC008003.8|AC008003 Drosophila melanogaster, chromosome 2L, r... 42 6.7
42gb|AC109614.9| Mus musculus chromosome 5, clone RP23-107M21, com... 42 6.7
43gb|AC105762.4| Homo sapiens BAC clone RP11-689P15 from 2, comple... 42 6.7
44gb|AC154741.3| Mus musculus BAC clone RP24-392C9 from chromosome... 42 6.7
45dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic D... 42 6.7
46gb|AC013445.8| Homo sapiens BAC clone RP11-489J10 from 2, comple... 42 6.7
47gb|AC016955.15| Homo sapiens 3 BAC RP11-21I16 (Roswell Park Canc... 42 6.7
48gb|AC074362.5| Homo sapiens BAC clone RP11-1C10 from 2, complete... 42 6.7
49dbj|AK099974.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 6.7
50gb|AC005633.2|AC005633 Drosophila melanogaster, chromosome 2L, r... 42 6.7
51emb|CR974430.11| Mouse DNA sequence from clone RP23-373C24 on ch... 42 6.7
52emb|AL359352.21| Mouse DNA sequence from clone CT7-350K7 on chro... 42 6.7 
>ref|NM_001061331.1| Oryza sativa (japonica cultivar-group) Os05g0177400 (Os05g0177400)
           mRNA, complete cds
          Length = 978
 Score = 69.9 bits (35), Expect = 3e-08
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 311 cctcgtcgagatcctttcccgtgtgccctacaggtcgctctgccgattcaagtccgtgtc 370
           ||||||||||||||| || || |||||||||| |||||||||||||| ||||| ||| ||
Sbjct: 75  cctcgtcgagatcctctcgcgcgtgccctacaagtcgctctgccgatccaagtgcgtctc 134

                      
Query: 371 caagccgtggc 381
           || || |||||
Sbjct: 135 caggcggtggc 145
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>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0029B02, complete sequence
          Length = 156649

 Score = 69.9 bits (35), Expect = 3e-08
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                         
Query: 311   cctcgtcgagatcctttcccgtgtgccctacaggtcgctctgccgattcaagtccgtgtc 370
             ||||||||||||||| || || |||||||||| |||||||||||||| ||||| ||| ||
Sbjct: 74381 cctcgtcgagatcctctcgcgcgtgccctacaagtcgctctgccgatccaagtgcgtctc 74322

                        
Query: 371   caagccgtggc 381
             || || |||||
Sbjct: 74321 caggcggtggc 74311



 Score = 61.9 bits (31), Expect = 7e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                         
Query: 311   cctcgtcgagatcctttcccgtgtgccctacaggtcgctctgccgattcaagtccgtgtc 370
             ||||||||||||||| || || |||||||||| ||||||||||||  |||||| ||| ||
Sbjct: 62549 cctcgtcgagatcctctcgcgcgtgccctacaagtcgctctgccgcctcaagtgcgtctc 62608

                        
Query: 371   caagccgtggc 381
             || || |||||
Sbjct: 62609 catgcggtggc 62619



 Score = 61.9 bits (31), Expect = 7e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                         
Query: 311   cctcgtcgagatcctttcccgtgtgccctacaggtcgctctgccgattcaagtccgtgtc 370
             |||||| |||||||| || || |||||||||| |||||||||||||| ||||| ||| ||
Sbjct: 65217 cctcgtagagatcctctcgcgcgtgccctacaagtcgctctgccgatccaagtgcgtctc 65276

                        
Query: 371   caagccgtggc 381
             || || |||||
Sbjct: 65277 cacgcggtggc 65287



 Score = 50.1 bits (25), Expect = 0.027
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 311  cctcgtcgagatcctttcccgtgtgccctacaggtcgctctgccg 355
            |||||||||| |||| || || |||||||||| ||||||||||||
Sbjct: 8353 cctcgtcgaggtcctctcgcgcgtgccctacaagtcgctctgccg 8309
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 69.9 bits (35), Expect = 3e-08
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                           
Query: 311     cctcgtcgagatcctttcccgtgtgccctacaggtcgctctgccgattcaagtccgtgtc 370
               ||||||||||||||| || || |||||||||| |||||||||||||| ||||| ||| ||
Sbjct: 4563914 cctcgtcgagatcctctcgcgcgtgccctacaagtcgctctgccgatccaagtgcgtctc 4563855

                          
Query: 371     caagccgtggc 381
               || || |||||
Sbjct: 4563854 caggcggtggc 4563844



 Score = 61.9 bits (31), Expect = 7e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                           
Query: 311     cctcgtcgagatcctttcccgtgtgccctacaggtcgctctgccgattcaagtccgtgtc 370
               ||||||||||||||| || || |||||||||| ||||||||||||  |||||| ||| ||
Sbjct: 4552082 cctcgtcgagatcctctcgcgcgtgccctacaagtcgctctgccgcctcaagtgcgtctc 4552141

                          
Query: 371     caagccgtggc 381
               || || |||||
Sbjct: 4552142 catgcggtggc 4552152



 Score = 61.9 bits (31), Expect = 7e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                           
Query: 311     cctcgtcgagatcctttcccgtgtgccctacaggtcgctctgccgattcaagtccgtgtc 370
               |||||| |||||||| || || |||||||||| |||||||||||||| ||||| ||| ||
Sbjct: 4554750 cctcgtagagatcctctcgcgcgtgccctacaagtcgctctgccgatccaagtgcgtctc 4554809

                          
Query: 371     caagccgtggc 381
               || || |||||
Sbjct: 4554810 cacgcggtggc 4554820



 Score = 50.1 bits (25), Expect = 0.027
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                            
Query: 311     cctcgtcgagatcctttcccgtgtgccctacaggtcgctctgccg 355
               |||||||||| |||| || || |||||||||| ||||||||||||
Sbjct: 4497886 cctcgtcgaggtcctctcgcgcgtgccctacaagtcgctctgccg 4497842
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>ref|NM_001061330.1| Oryza sativa (japonica cultivar-group) Os05g0177100 (Os05g0177100)
           mRNA, partial cds
          Length = 1515

 Score = 61.9 bits (31), Expect = 7e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 311 cctcgtcgagatcctttcccgtgtgccctacaggtcgctctgccgattcaagtccgtgtc 370
           |||||| |||||||| || || |||||||||| |||||||||||||| ||||| ||| ||
Sbjct: 183 cctcgtagagatcctctcgcgcgtgccctacaagtcgctctgccgatccaagtgcgtctc 242

                      
Query: 371 caagccgtggc 381
           || || |||||
Sbjct: 243 cacgcggtggc 253
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>ref|NM_001061329.1| Oryza sativa (japonica cultivar-group) Os05g0177000 (Os05g0177000)
           mRNA, complete cds
          Length = 1717

 Score = 61.9 bits (31), Expect = 7e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 311 cctcgtcgagatcctttcccgtgtgccctacaggtcgctctgccgattcaagtccgtgtc 370
           ||||||||||||||| || || |||||||||| ||||||||||||  |||||| ||| ||
Sbjct: 182 cctcgtcgagatcctctcgcgcgtgccctacaagtcgctctgccgcctcaagtgcgtctc 241

                      
Query: 371 caagccgtggc 381
           || || |||||
Sbjct: 242 catgcggtggc 252
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>dbj|AK064652.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-E10, full
           insert sequence
          Length = 1514

 Score = 61.9 bits (31), Expect = 7e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 311 cctcgtcgagatcctttcccgtgtgccctacaggtcgctctgccgattcaagtccgtgtc 370
           |||||| |||||||| || || |||||||||| |||||||||||||| ||||| ||| ||
Sbjct: 183 cctcgtagagatcctctcgcgcgtgccctacaagtcgctctgccgatccaagtgcgtctc 242

                      
Query: 371 caagccgtggc 381
           || || |||||
Sbjct: 243 cacgcggtggc 253
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>dbj|AK064399.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-G12, full
           insert sequence
          Length = 1717

 Score = 61.9 bits (31), Expect = 7e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 311 cctcgtcgagatcctttcccgtgtgccctacaggtcgctctgccgattcaagtccgtgtc 370
           ||||||||||||||| || || |||||||||| ||||||||||||  |||||| ||| ||
Sbjct: 182 cctcgtcgagatcctctcgcgcgtgccctacaagtcgctctgccgcctcaagtgcgtctc 241

                      
Query: 371 caagccgtggc 381
           || || |||||
Sbjct: 242 catgcggtggc 252
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>ref|NM_001061321.1| Oryza sativa (japonica cultivar-group) Os05g0175800 (Os05g0175800)
           mRNA, complete cds
          Length = 3540

 Score = 50.1 bits (25), Expect = 0.027
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 311 cctcgtcgagatcctttcccgtgtgccctacaggtcgctctgccg 355
           |||||||||| |||| || || |||||||||| ||||||||||||
Sbjct: 66  cctcgtcgaggtcctctcgcgcgtgccctacaagtcgctctgccg 110
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>gb|AC135426.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617A08,
              complete sequence
          Length = 144781

 Score = 50.1 bits (25), Expect = 0.027
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                           
Query: 311    cctcgtcgagatcctttcccgtgtgccctacaggtcgctctgccg 355
              |||||||||| |||| || || |||||||||| ||||||||||||
Sbjct: 119510 cctcgtcgaggtcctctcgcgcgtgccctacaagtcgctctgccg 119466
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.11
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 1174     ttgcagttcatccagattgcaatatgat 1201
                ||||||||||||||||||||||| ||||
Sbjct: 20956102 ttgcagttcatccagattgcaatttgat 20956129
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>dbj|AP006753.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0039D04
          Length = 184408

 Score = 48.1 bits (24), Expect = 0.11
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 1174   ttgcagttcatccagattgcaatatgat 1201
              ||||||||||||||||||||||| ||||
Sbjct: 166892 ttgcagttcatccagattgcaatttgat 166919
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>dbj|AP003811.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1131_E05
          Length = 122216

 Score = 48.1 bits (24), Expect = 0.11
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 1174  ttgcagttcatccagattgcaatatgat 1201
             ||||||||||||||||||||||| ||||
Sbjct: 84017 ttgcagttcatccagattgcaatttgat 84044
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>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome
          Length = 6988209

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 56      cggcgagcagcggcagccggcgtcgcggccgtcg 89
               ||||| || ||||| |||||||||||||||||||
Sbjct: 4711903 cggcgggcggcggcggccggcgtcgcggccgtcg 4711936
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>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence
          Length = 21146708

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 1553    cacctagccatttaatctattt 1574
               ||||||||||||||||||||||
Sbjct: 2136695 cacctagccatttaatctattt 2136716
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>gb|AC016368.3| Drosophila melanogaster clone BACR36A03, complete sequence
          Length = 165876

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1553  cacctagccatttaatctattt 1574
             ||||||||||||||||||||||
Sbjct: 20536 cacctagccatttaatctattt 20557
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>gb|AC008257.6| Drosophila melanogaster clone BACR08A11, complete sequence
          Length = 170478

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1553   cacctagccatttaatctattt 1574
              ||||||||||||||||||||||
Sbjct: 118692 cacctagccatttaatctattt 118713
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>ref|XM_818259.1| Trypanosoma brucei TREU927 CYC2-like cyclin (Tb10.26.0510) partial
           mRNA
          Length = 2700

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 65  gcggcagccggcgtcgcggccg 86
           ||||||||||||||||||||||
Sbjct: 368 gcggcagccggcgtcgcggccg 347
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>gb|AY157030.2| Trypanosoma brucei putative G1 cyclin CycE4 mRNA, complete cds
          Length = 2700

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 65  gcggcagccggcgtcgcggccg 86
           ||||||||||||||||||||||
Sbjct: 368 gcggcagccggcgtcgcggccg 347
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>gb|AC105337.7| Homo sapiens chromosome 17, clone CTD-2116F7, complete sequence
          Length = 126083

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1659  tttgtgttgttttcatctgttc 1680
             ||||||||||||||||||||||
Sbjct: 88551 tttgtgttgttttcatctgttc 88572
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>emb|AL646016.8| Human DNA sequence from clone RP11-90L13 on chromosome 1 Contains the
             3' end of the FMN2 gene for formin 2, complete sequence
          Length = 76813

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1658  atttgtgttgttttcatctgtt 1679
             ||||||||||||||||||||||
Sbjct: 13698 atttgtgttgttttcatctgtt 13677
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>gb|AF228315.1|AF228315 Drosophila melanogaster phospholipase D gene, complete cds
          Length = 7950

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1553 cacctagccatttaatctattt 1574
            ||||||||||||||||||||||
Sbjct: 1810 cacctagccatttaatctattt 1831
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>emb|AL844482.6| Mouse DNA sequence from clone RP23-81A18 on chromosome X, complete
             sequence
          Length = 141997

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1686  catttgttttatgcaaatatct 1707
             ||||||||||||||||||||||
Sbjct: 49905 catttgttttatgcaaatatct 49926
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>emb|AJ496593.1|TBR496593 Trypanosoma brucei CYC5 gene for cyclin 5
          Length = 2700

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 65   gcggcagccggcgtcgcggccg 86
            ||||||||||||||||||||||
Sbjct: 2333 gcggcagccggcgtcgcggccg 2354
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>gb|AC191223.2| Gallus gallus BAC clone CH261-26B9 from chromosome z, complete sequence
          Length = 214682

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1242   atggataatcagaaagtgcatgtta 1266
              |||||| ||||||||||||||||||
Sbjct: 100490 atggattatcagaaagtgcatgtta 100514
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>emb|CT831244.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN082M11, full
           insert sequence
          Length = 789

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 21  gccgccgcaccgttccccctc 41
           |||||||||||||||||||||
Sbjct: 426 gccgccgcaccgttccccctc 406
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>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome
          Length = 9965640

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 62      gcagcggcagccggcgtcgcg 82
               |||||||||||||||||||||
Sbjct: 3389375 gcagcggcagccggcgtcgcg 3389355
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>ref|NM_001053747.1| Oryza sativa (japonica cultivar-group) Os02g0575500 (Os02g0575500)
           mRNA, complete cds
          Length = 2632

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 21  gccgccgcaccgttccccctc 41
           |||||||||||||||||||||
Sbjct: 407 gccgccgcaccgttccccctc 387
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>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence
          Length = 23011544

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 265     tgaggaagaagcagcagcagc 285
               |||||||||||||||||||||
Sbjct: 4053920 tgaggaagaagcagcagcagc 4053900
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>emb|CR318605.17| Zebrafish DNA sequence from clone DKEY-109C12 in linkage group 7,
             complete sequence
          Length = 110124

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 421   cacagaccctctctggcttct 441
             |||||||||||||||||||||
Sbjct: 96073 cacagaccctctctggcttct 96093
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>gb|BT017471.1| Zea mays clone EL01N0408D01.c mRNA sequence
          Length = 1159

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 266 gaggaagaagcagcagcagcc 286
           |||||||||||||||||||||
Sbjct: 702 gaggaagaagcagcagcagcc 722
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 12      cccaaaccagccgccgcaccg 32
               |||||||||||||||||||||
Sbjct: 4561778 cccaaaccagccgccgcaccg 4561798
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 443    ttaccatgatgaaggccatgg 463
              |||||||||||||||||||||
Sbjct: 280591 ttaccatgatgaaggccatgg 280571
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>gb|AC162903.3| Mus musculus BAC clone RP24-68D13 from chromosome 9, complete sequence
          Length = 198549

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 438    ttcttttaccatgatgaaggc 458
              |||||||||||||||||||||
Sbjct: 157182 ttcttttaccatgatgaaggc 157162
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>emb|CT009489.6| Mouse DNA sequence from clone RP23-97F8 on chromosome 14, complete
             sequence
          Length = 150382

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1523  gggtgagggtactgattagtt 1543
             |||||||||||||||||||||
Sbjct: 88767 gggtgagggtactgattagtt 88747
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>gb|AC006586.10| Arabidopsis thaliana chromosome 2 clone F7B19 map mi421, complete
            sequence
          Length = 117728

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1657 tatttgtgttgttttcatctg 1677
            |||||||||||||||||||||
Sbjct: 535  tatttgtgttgttttcatctg 555
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>gb|AC006219.10| Arabidopsis thaliana chromosome 2 clone T14C8 map g4532, complete
             sequence
          Length = 82532

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1657  tatttgtgttgttttcatctg 1677
             |||||||||||||||||||||
Sbjct: 72934 tatttgtgttgttttcatctg 72954
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 21       gccgccgcaccgttccccctc 41
                |||||||||||||||||||||
Sbjct: 22097288 gccgccgcaccgttccccctc 22097268
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>emb|AL135918.6| Human DNA sequence from clone RP1-89K8 on chromosome 6, complete
             sequence
          Length = 110716

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1246  ataatcagaaagtgcatgtta 1266
             |||||||||||||||||||||
Sbjct: 54170 ataatcagaaagtgcatgtta 54150
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>emb|AL035668.15|HS859D4 Human DNA sequence from clone RP5-859D4 on chromosome 20p12.1-13
             Contains the BMP2 gene for bone morphogenetic protein 2, a
             novel gene and a CpG island, complete sequence
          Length = 173308

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1296  tatgttccatgttttgcagaa 1316
             |||||||||||||||||||||
Sbjct: 68889 tatgttccatgttttgcagaa 68909
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>emb|BX548069.7| Zebrafish DNA sequence from clone CH211-238G23 in linkage group 18,
              complete sequence
          Length = 142514

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1194   aatatgattttccttactgac 1214
              |||||||||||||||||||||
Sbjct: 105702 aatatgattttccttactgac 105682
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>gb|AC008003.8|AC008003 Drosophila melanogaster, chromosome 2L, region 24D-24D, BAC clone
              BACR48D02, complete sequence
          Length = 181728

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 265    tgaggaagaagcagcagcagc 285
              |||||||||||||||||||||
Sbjct: 101882 tgaggaagaagcagcagcagc 101862
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>gb|AC109614.9| Mus musculus chromosome 5, clone RP23-107M21, complete sequence
          Length = 194308

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 969    ccaaatgacttgccaaacatc 989
              |||||||||||||||||||||
Sbjct: 160723 ccaaatgacttgccaaacatc 160743
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>gb|AC105762.4| Homo sapiens BAC clone RP11-689P15 from 2, complete sequence
          Length = 76326

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 266   gaggaagaagcagcagcagcc 286
             |||||||||||||||||||||
Sbjct: 75020 gaggaagaagcagcagcagcc 75000
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>gb|AC154741.3| Mus musculus BAC clone RP24-392C9 from chromosome 9, complete sequence
          Length = 178684

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 438    ttcttttaccatgatgaaggc 458
              |||||||||||||||||||||
Sbjct: 171678 ttcttttaccatgatgaaggc 171698
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>dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0703B01
          Length = 137445

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 21    gccgccgcaccgttccccctc 41
             |||||||||||||||||||||
Sbjct: 71187 gccgccgcaccgttccccctc 71167
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>gb|AC013445.8| Homo sapiens BAC clone RP11-489J10 from 2, complete sequence
          Length = 183960

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1657  tatttgtgttgttttcatctg 1677
             |||||||||||||||||||||
Sbjct: 17307 tatttgtgttgttttcatctg 17287
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>gb|AC016955.15| Homo sapiens 3 BAC RP11-21I16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 169343

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 1015  gcttatatgcatggcagacagataatttt 1043
             |||| |||||| |||||||||||||||||
Sbjct: 22963 gcttctatgcaaggcagacagataatttt 22935
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>gb|AC074362.5| Homo sapiens BAC clone RP11-1C10 from 2, complete sequence
          Length = 149705

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 266 gaggaagaagcagcagcagcc 286
           |||||||||||||||||||||
Sbjct: 694 gaggaagaagcagcagcagcc 674
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>dbj|AK099974.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128D08, full
           insert sequence
          Length = 2633

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 21  gccgccgcaccgttccccctc 41
           |||||||||||||||||||||
Sbjct: 408 gccgccgcaccgttccccctc 388
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>gb|AC005633.2|AC005633 Drosophila melanogaster, chromosome 2L, region 24D3-24D5, P1 clone
             DS04766, complete sequence
          Length = 64879

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 265   tgaggaagaagcagcagcagc 285
             |||||||||||||||||||||
Sbjct: 50346 tgaggaagaagcagcagcagc 50326
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>emb|CR974430.11| Mouse DNA sequence from clone RP23-373C24 on chromosome 17, complete
              sequence
          Length = 199120

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1523   gggtgagggtactgattagtt 1543
              |||||||||||||||||||||
Sbjct: 134407 gggtgagggtactgattagtt 134387
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>emb|AL359352.21| Mouse DNA sequence from clone CT7-350K7 on chromosome 17, complete
             sequence
          Length = 162935

 Score = 42.1 bits (21), Expect = 6.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1523  gggtgagggtactgattagtt 1543
             |||||||||||||||||||||
Sbjct: 56394 gggtgagggtactgattagtt 56374


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 285,593,685
Number of extensions: 15998444
Number of successful extensions: 348024
Number of sequences better than 10.0: 52
Number of HSP's gapped: 348024
Number of HSP's successfully gapped: 58
Length of query: 1746
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1723
Effective length of database: 18,503,978,556
Effective search space: 31882355051988
Effective search space used: 31882355051988
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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