| Clone Name | FLbaf162b13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK103881:Os01g0390900 | 74 | 1e-13 | 2 | AK121808:Os05g0161200 | 30 | 2.8 | 3 | AB042936:Os05g0161200 | 30 | 2.8 | 4 | AK120950:Os08g0430000 | 28 | 6.2 | 5 | AK066952:Os06g0298400 | 28 | 6.2 | 6 | AK106892:Os02g0694700 | 28 | 8.1 | 7 | AK066534:Os06g0251700 | 28 | 8.1 |
|---|
>AK103881:Os01g0390900 | Length = 199 Score = 73.9 bits (180), Expect = 1e-13 Identities = 35/52 (67%), Positives = 40/52 (76%) Frame = +1 Query: 40 MSVPEAGQSAGRDEQEMDDYEQHQTRVLMALMQGLCAARYRKADNTPCLVDQ 195 MS+PEAG+S ++ DDYEQ Q RVLMALMQG CAARYRKADN PC + Q Sbjct: 1 MSMPEAGRSERDGREQDDDYEQQQARVLMALMQGFCAARYRKADNIPCPIVQ 52
>AK121808:Os05g0161200 | Length = 583 Score = 29.6 bits (65), Expect = 2.8 Identities = 15/23 (65%), Positives = 15/23 (65%) Frame = +3 Query: 168 RQHPLPRRPGLTAPRPLFHHRFP 236 RQHP PRRPGL PR L R P Sbjct: 20 RQHPHPRRPGL-RPRRLHRLRLP 41
>AB042936:Os05g0161200 | Length = 583 Score = 29.6 bits (65), Expect = 2.8 Identities = 15/23 (65%), Positives = 15/23 (65%) Frame = +3 Query: 168 RQHPLPRRPGLTAPRPLFHHRFP 236 RQHP PRRPGL PR L R P Sbjct: 20 RQHPHPRRPGL-RPRRLHRLRLP 41
>AK120950:Os08g0430000 | Length = 1463 Score = 28.5 bits (62), Expect = 6.2 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 5/69 (7%) Frame = -1 Query: 669 HLPLNSKTTCSSMANNSSRSLAPSNGKSYSRKPSRILAGMRQ-----WISLSDSNGVLTS 505 H +N + S+A+ R + SR SR +G R W S + V+ + Sbjct: 1192 HANVNMSSARCSLASRQRRFPQHRASLNLSRAHSRSPSGSRSRSPHAWTSPRNRREVMVN 1251 Query: 504 DSNGFWRHS 478 S+ WRHS Sbjct: 1252 GSSSLWRHS 1260
>AK066952:Os06g0298400 | Length = 860 Score = 28.5 bits (62), Expect = 6.2 Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Frame = -1 Query: 645 TCSSMANN--SSRSLAPSNGKSYSRKPSRILAGMRQWISLSDSNGVLTSDSN 496 T SS+ +N SS +LAP+N +SR+ I++ + SLS G ++ ++ Sbjct: 633 TSSSVLDNTTSSSNLAPANSSLHSRESDNIISKEAKLASLSQPVGATSASAS 684
>AK106892:Os02g0694700 | Length = 415 Score = 28.1 bits (61), Expect = 8.1 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Frame = -2 Query: 389 CSTTQIPVPQKNGSCDLDQRILANLH-QETPTMLPTLDAAIQH*IASGDPIRWETVVEER 213 C TQ + K GS +A L +T P A ++ + G+ RWE++V Sbjct: 276 CMETQCRIHVKEGS-------VARLTCPDTSCRRPLPPALLRGLLGDGEYARWESLVLRG 328 Query: 212 PWSR-QTWSTRQG 177 W+R TW T G Sbjct: 329 CWTRCPTWPTAPG 341
>AK066534:Os06g0251700 | Length = 608 Score = 28.1 bits (61), Expect = 8.1 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = -1 Query: 621 SSRSLAPSNGKSYSRKPSRILA-GMRQWISLSDSNGVLTSDSNGFWRHSYL 472 S S P+ GKS+S PSR L+ G +S NG+L S F S L Sbjct: 363 SGSSRLPTEGKSFSNGPSRRLSLGGADNMSKLSPNGLLARRSPSFHSRSSL 413 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 24,497,117 Number of extensions: 572895 Number of successful extensions: 1485 Number of sequences better than 10.0: 7 Number of HSP's gapped: 1481 Number of HSP's successfully gapped: 7 Length of query: 283 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 184 Effective length of database: 11,435,796 Effective search space: 2104186464 Effective search space used: 2104186464 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)