| Clone Name | FLbaf155p13 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 208 bits (105), Expect = 8e-50 Identities = 147/161 (91%) Strand = Plus / Plus Query: 224 agagcaatctgccgctacatagcagaaacctacgagcagcgtgggtatcctttcctcctg 283 |||||||| ||||||||||||||||||||||| || |||||||||||||||||||| ||| Sbjct: 27603362 agagcaatttgccgctacatagcagaaacctatgaacagcgtgggtatcctttcctgctg 27603421 Query: 284 gggaaggatgtcctggagagggcttccatcgagcaatggctccggcacgaggagcacgcc 343 || |||||||| ||||||||||||||||| || ||||||||||| || |||||||| || Sbjct: 27603422 ggaaaggatgttctggagagggcttccattgaacaatggctccgtcatgaggagcatgcg 27603481 Query: 344 ttcgatcctccgagccgggcattgttctgccacctggcctt 384 || ||||||||||||||||||||||| |||||||||||||| Sbjct: 27603482 tttgatcctccgagccgggcattgttttgccacctggcctt 27603522 Score = 153 bits (77), Expect = 4e-33 Identities = 148/171 (86%), Gaps = 3/171 (1%) Strand = Plus / Plus Query: 434 ctggaggaagtcctggaggtttacgagcaaaggcttggcgagagcgagttccttgctggg 493 ||||| |||||||| || || || || ||||||||||| ||||| ||||||||||||||| Sbjct: 27603572 ctggaagaagtccttgaagtctatgaacaaaggcttggtgagagtgagttccttgctggg 27603631 Query: 494 aacaagttcactcttgccgaccttgttcacctgccaaacacccatcacatagtgacgtcc 553 ||||||||||| ||||| |||||||||||| ||||||||||||| ||| | ||||| || Sbjct: 27603632 aacaagttcacccttgctgaccttgttcacttgccaaacacccaccaccttgtgacatc- 27603690 Query: 554 gacgagttcgcctacctgtatgactcgaggaagaacgtgcagaggtggtgg 604 || || ||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 27603691 --tgaatttgcctacctgtatgactcaaggaagaatgtgcagaggtggtgg 27603739 Score = 149 bits (75), Expect = 6e-32 Identities = 141/163 (86%) Strand = Plus / Plus Query: 4 catggcggggctcggcaccggcgcgggggctcctcttgtgaaggtgtaccatgagaagtc 63 |||||| ||||| ||||||| || || ||||| |||||||| | ||||||||||| || Sbjct: 27602103 catggcagggcttagcaccggagcaggtgctccagttgtgaagttataccatgagaaatc 27602162 Query: 64 catgatcctgcccgatgtgtcgagggtgcttgcttgcctgtacgagaaaaacatcgagtt 123 ||||||| |||| |||||||| || |||||||| |||||||| ||||||||||||||||| Sbjct: 27602163 catgatcatgcctgatgtgtccagagtgcttgcatgcctgtatgagaaaaacatcgagtt 27602222 Query: 124 tgaaaccgtcaaagattcctacaaggacatactcaggctccag 166 ||| || ||||| ||||| ||||||||||| |||||||||||| Sbjct: 27602223 tgagactgtcaaggattcttacaaggacatcctcaggctccag 27602265 Score = 69.9 bits (35), Expect = 5e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 172 gaggagtgttccggttccattctacgacggacccacatttcgacaag 218 |||||||||||| |||||||||||||| ||||||||||||| ||||| Sbjct: 27602403 gaggagtgttccagttccattctacgatggacccacatttctacaag 27602449 Score = 54.0 bits (27), Expect = 0.003 Identities = 75/91 (82%) Strand = Plus / Plus Query: 2400 tgaaaaacaacagaaataatagcaaatcggatggctcaagcaaacccacccaatttgatg 2459 |||||| |||||||||||| |||||| | |||||||||| ||||||| |||||||| Sbjct: 27607320 tgaaaagcaacagaaataacagcaaaccagatggctcaactgaacccacttcatttgatg 27607379 Query: 2460 gtaataaaggtgatgtccctgagtgacagag 2490 | ||| ||||| || | ||||||| |||||| Sbjct: 27607380 gcaatgaaggtaatcttcctgagtcacagag 27607410
>dbj|AP005251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0011H15 Length = 130146 Score = 208 bits (105), Expect = 8e-50 Identities = 147/161 (91%) Strand = Plus / Plus Query: 224 agagcaatctgccgctacatagcagaaacctacgagcagcgtgggtatcctttcctcctg 283 |||||||| ||||||||||||||||||||||| || |||||||||||||||||||| ||| Sbjct: 706 agagcaatttgccgctacatagcagaaacctatgaacagcgtgggtatcctttcctgctg 765 Query: 284 gggaaggatgtcctggagagggcttccatcgagcaatggctccggcacgaggagcacgcc 343 || |||||||| ||||||||||||||||| || ||||||||||| || |||||||| || Sbjct: 766 ggaaaggatgttctggagagggcttccattgaacaatggctccgtcatgaggagcatgcg 825 Query: 344 ttcgatcctccgagccgggcattgttctgccacctggcctt 384 || ||||||||||||||||||||||| |||||||||||||| Sbjct: 826 tttgatcctccgagccgggcattgttttgccacctggcctt 866 Score = 153 bits (77), Expect = 4e-33 Identities = 148/171 (86%), Gaps = 3/171 (1%) Strand = Plus / Plus Query: 434 ctggaggaagtcctggaggtttacgagcaaaggcttggcgagagcgagttccttgctggg 493 ||||| |||||||| || || || || ||||||||||| ||||| ||||||||||||||| Sbjct: 916 ctggaagaagtccttgaagtctatgaacaaaggcttggtgagagtgagttccttgctggg 975 Query: 494 aacaagttcactcttgccgaccttgttcacctgccaaacacccatcacatagtgacgtcc 553 ||||||||||| ||||| |||||||||||| ||||||||||||| ||| | ||||| || Sbjct: 976 aacaagttcacccttgctgaccttgttcacttgccaaacacccaccaccttgtgacatc- 1034 Query: 554 gacgagttcgcctacctgtatgactcgaggaagaacgtgcagaggtggtgg 604 || || ||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 1035 --tgaatttgcctacctgtatgactcaaggaagaatgtgcagaggtggtgg 1083 Score = 54.0 bits (27), Expect = 0.003 Identities = 75/91 (82%) Strand = Plus / Plus Query: 2400 tgaaaaacaacagaaataatagcaaatcggatggctcaagcaaacccacccaatttgatg 2459 |||||| |||||||||||| |||||| | |||||||||| ||||||| |||||||| Sbjct: 4664 tgaaaagcaacagaaataacagcaaaccagatggctcaactgaacccacttcatttgatg 4723 Query: 2460 gtaataaaggtgatgtccctgagtgacagag 2490 | ||| ||||| || | ||||||| |||||| Sbjct: 4724 gcaatgaaggtaatcttcctgagtcacagag 4754
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 208 bits (105), Expect = 8e-50 Identities = 147/161 (91%) Strand = Plus / Plus Query: 224 agagcaatctgccgctacatagcagaaacctacgagcagcgtgggtatcctttcctcctg 283 |||||||| ||||||||||||||||||||||| || |||||||||||||||||||| ||| Sbjct: 85652 agagcaatttgccgctacatagcagaaacctatgaacagcgtgggtatcctttcctgctg 85711 Query: 284 gggaaggatgtcctggagagggcttccatcgagcaatggctccggcacgaggagcacgcc 343 || |||||||| ||||||||||||||||| || ||||||||||| || |||||||| || Sbjct: 85712 ggaaaggatgttctggagagggcttccattgaacaatggctccgtcatgaggagcatgcg 85771 Query: 344 ttcgatcctccgagccgggcattgttctgccacctggcctt 384 || ||||||||||||||||||||||| |||||||||||||| Sbjct: 85772 tttgatcctccgagccgggcattgttttgccacctggcctt 85812 Score = 153 bits (77), Expect = 4e-33 Identities = 148/171 (86%), Gaps = 3/171 (1%) Strand = Plus / Plus Query: 434 ctggaggaagtcctggaggtttacgagcaaaggcttggcgagagcgagttccttgctggg 493 ||||| |||||||| || || || || ||||||||||| ||||| ||||||||||||||| Sbjct: 85862 ctggaagaagtccttgaagtctatgaacaaaggcttggtgagagtgagttccttgctggg 85921 Query: 494 aacaagttcactcttgccgaccttgttcacctgccaaacacccatcacatagtgacgtcc 553 ||||||||||| ||||| |||||||||||| ||||||||||||| ||| | ||||| || Sbjct: 85922 aacaagttcacccttgctgaccttgttcacttgccaaacacccaccaccttgtgacatc- 85980 Query: 554 gacgagttcgcctacctgtatgactcgaggaagaacgtgcagaggtggtgg 604 || || ||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 85981 --tgaatttgcctacctgtatgactcaaggaagaatgtgcagaggtggtgg 86029 Score = 149 bits (75), Expect = 6e-32 Identities = 141/163 (86%) Strand = Plus / Plus Query: 4 catggcggggctcggcaccggcgcgggggctcctcttgtgaaggtgtaccatgagaagtc 63 |||||| ||||| ||||||| || || ||||| |||||||| | ||||||||||| || Sbjct: 84393 catggcagggcttagcaccggagcaggtgctccagttgtgaagttataccatgagaaatc 84452 Query: 64 catgatcctgcccgatgtgtcgagggtgcttgcttgcctgtacgagaaaaacatcgagtt 123 ||||||| |||| |||||||| || |||||||| |||||||| ||||||||||||||||| Sbjct: 84453 catgatcatgcctgatgtgtccagagtgcttgcatgcctgtatgagaaaaacatcgagtt 84512 Query: 124 tgaaaccgtcaaagattcctacaaggacatactcaggctccag 166 ||| || ||||| ||||| ||||||||||| |||||||||||| Sbjct: 84513 tgagactgtcaaggattcttacaaggacatcctcaggctccag 84555 Score = 69.9 bits (35), Expect = 5e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 172 gaggagtgttccggttccattctacgacggacccacatttcgacaag 218 |||||||||||| |||||||||||||| ||||||||||||| ||||| Sbjct: 84693 gaggagtgttccagttccattctacgatggacccacatttctacaag 84739 Score = 54.0 bits (27), Expect = 0.003 Identities = 75/91 (82%) Strand = Plus / Plus Query: 2400 tgaaaaacaacagaaataatagcaaatcggatggctcaagcaaacccacccaatttgatg 2459 |||||| |||||||||||| |||||| | |||||||||| ||||||| |||||||| Sbjct: 89610 tgaaaagcaacagaaataacagcaaaccagatggctcaactgaacccacttcatttgatg 89669 Query: 2460 gtaataaaggtgatgtccctgagtgacagag 2490 | ||| ||||| || | ||||||| |||||| Sbjct: 89670 gcaatgaaggtaatcttcctgagtcacagag 89700
>ref|NM_001070366.1| Oryza sativa (japonica cultivar-group) Os09g0544400 (Os09g0544400) mRNA, complete cds Length = 12660 Score = 151 bits (76), Expect = 2e-32 Identities = 169/200 (84%) Strand = Plus / Plus Query: 185 gttccattctacgacggacccacatttcgacaagagtcgagagcaatctgccgctacata 244 ||||||||||| || ||||| ||||||| |||| || |||| ||||||||||||||| Sbjct: 175 gttccattctatgatggacctacatttctggaagaatccagagaaatctgccgctacatt 234 Query: 245 gcagaaacctacgagcagcgtgggtatcctttcctcctggggaaggatgtcctggagagg 304 |||||||| || || || | ||||||||| || ||||| |||||||||| ||| |||||| Sbjct: 235 gcagaaacttatgaacatcatgggtatccatttctccttgggaaggatgccctcgagagg 294 Query: 305 gcttccatcgagcaatggctccggcacgaggagcacgccttcgatcctccgagccgggca 364 |||||||||||||||||||||| || |||||||| || ||| | ||||| ||||| || Sbjct: 295 gcttccatcgagcaatggctccaccatgaggagcatgctttcaaccctccaagccgagcc 354 Query: 365 ttgttctgccacctggcctt 384 || ||||||||||||||||| Sbjct: 355 ttattctgccacctggcctt 374 Score = 77.8 bits (39), Expect = 2e-10 Identities = 144/179 (80%) Strand = Plus / Plus Query: 431 aagctggaggaagtcctggaggtttacgagcaaaggcttggcgagagcgagttccttgct 490 |||||||| || || ||||| ||||| ||||||||||| | || || || |||||||| Sbjct: 415 aagctggatgaggttctggaagtttatgagcaaaggctcagtgatagtgaattccttgcc 474 Query: 491 gggaacaagttcactcttgccgaccttgttcacctgccaaacacccatcacatagtgacg 550 || || || || |||||||| ||||| || |||||||||||| |||| |||| | Sbjct: 475 ggcaataaatttactcttgcagacctcgtacacctgccaaactcccactacatcaaagca 534 Query: 551 tccgacgagttcgcctacctgtatgactcgaggaagaacgtgcagaggtggtggaatgc 609 || | | |||| |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 535 tctggcaagtttgcctacctctatgactcaaggaagaatgtgcagaggtggtggaatgc 593 Score = 46.1 bits (23), Expect = 0.67 Identities = 47/55 (85%) Strand = Plus / Plus Query: 39 ttgtgaaggtgtaccatgagaagtccatgatcctgcccgatgtgtcgagggtgct 93 ||||||||||||| |||||||| || |||||| | || ||||| || |||||||| Sbjct: 29 ttgtgaaggtgtatcatgagaaatctatgatcttacctgatgtttcaagggtgct 83
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 137 bits (69), Expect = 2e-28 Identities = 138/161 (85%) Strand = Plus / Plus Query: 224 agagcaatctgccgctacatagcagaaacctacgagcagcgtgggtatcctttcctcctg 283 |||| ||||||||||||||| |||||||| || || || | ||||||||| || ||||| Sbjct: 21196847 agagaaatctgccgctacattgcagaaacttatgaacatcatgggtatccatttctcctt 21196906 Query: 284 gggaaggatgtcctggagagggcttccatcgagcaatggctccggcacgaggagcacgcc 343 |||||||||| ||| |||||||||||||||||||||||||||| || |||||||| || Sbjct: 21196907 gggaaggatgccctcgagagggcttccatcgagcaatggctccaccatgaggagcatgct 21196966 Query: 344 ttcgatcctccgagccgggcattgttctgccacctggcctt 384 ||| | ||||| ||||| || || ||||||||||||||||| Sbjct: 21196967 ttcaaccctccaagccgagccttattctgccacctggcctt 21197007 Score = 77.8 bits (39), Expect = 2e-10 Identities = 144/179 (80%) Strand = Plus / Plus Query: 431 aagctggaggaagtcctggaggtttacgagcaaaggcttggcgagagcgagttccttgct 490 |||||||| || || ||||| ||||| ||||||||||| | || || || |||||||| Sbjct: 21197048 aagctggatgaggttctggaagtttatgagcaaaggctcagtgatagtgaattccttgcc 21197107 Query: 491 gggaacaagttcactcttgccgaccttgttcacctgccaaacacccatcacatagtgacg 550 || || || || |||||||| ||||| || |||||||||||| |||| |||| | Sbjct: 21197108 ggcaataaatttactcttgcagacctcgtacacctgccaaactcccactacatcaaagca 21197167 Query: 551 tccgacgagttcgcctacctgtatgactcgaggaagaacgtgcagaggtggtggaatgc 609 || | | |||| |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 21197168 tctggcaagtttgcctacctctatgactcaaggaagaatgtgcagaggtggtggaatgc 21197226 Score = 46.1 bits (23), Expect = 0.67 Identities = 47/55 (85%) Strand = Plus / Plus Query: 39 ttgtgaaggtgtaccatgagaagtccatgatcctgcccgatgtgtcgagggtgct 93 ||||||||||||| |||||||| || |||||| | || ||||| || |||||||| Sbjct: 21195250 ttgtgaaggtgtatcatgagaaatctatgatcttacctgatgtttcaagggtgct 21195304
>dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0705E11 Length = 140729 Score = 137 bits (69), Expect = 2e-28 Identities = 138/161 (85%) Strand = Plus / Plus Query: 224 agagcaatctgccgctacatagcagaaacctacgagcagcgtgggtatcctttcctcctg 283 |||| ||||||||||||||| |||||||| || || || | ||||||||| || ||||| Sbjct: 67604 agagaaatctgccgctacattgcagaaacttatgaacatcatgggtatccatttctcctt 67663 Query: 284 gggaaggatgtcctggagagggcttccatcgagcaatggctccggcacgaggagcacgcc 343 |||||||||| ||| |||||||||||||||||||||||||||| || |||||||| || Sbjct: 67664 gggaaggatgccctcgagagggcttccatcgagcaatggctccaccatgaggagcatgct 67723 Query: 344 ttcgatcctccgagccgggcattgttctgccacctggcctt 384 ||| | ||||| ||||| || || ||||||||||||||||| Sbjct: 67724 ttcaaccctccaagccgagccttattctgccacctggcctt 67764 Score = 77.8 bits (39), Expect = 2e-10 Identities = 144/179 (80%) Strand = Plus / Plus Query: 431 aagctggaggaagtcctggaggtttacgagcaaaggcttggcgagagcgagttccttgct 490 |||||||| || || ||||| ||||| ||||||||||| | || || || |||||||| Sbjct: 67805 aagctggatgaggttctggaagtttatgagcaaaggctcagtgatagtgaattccttgcc 67864 Query: 491 gggaacaagttcactcttgccgaccttgttcacctgccaaacacccatcacatagtgacg 550 || || || || |||||||| ||||| || |||||||||||| |||| |||| | Sbjct: 67865 ggcaataaatttactcttgcagacctcgtacacctgccaaactcccactacatcaaagca 67924 Query: 551 tccgacgagttcgcctacctgtatgactcgaggaagaacgtgcagaggtggtggaatgc 609 || | | |||| |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 67925 tctggcaagtttgcctacctctatgactcaaggaagaatgtgcagaggtggtggaatgc 67983 Score = 46.1 bits (23), Expect = 0.67 Identities = 47/55 (85%) Strand = Plus / Plus Query: 39 ttgtgaaggtgtaccatgagaagtccatgatcctgcccgatgtgtcgagggtgct 93 ||||||||||||| |||||||| || |||||| | || ||||| || |||||||| Sbjct: 66007 ttgtgaaggtgtatcatgagaaatctatgatcttacctgatgtttcaagggtgct 66061
>gb|AF244681.1|AF244681 Zea mays glutathione S-transferase GST 16 mRNA, complete cds Length = 1098 Score = 101 bits (51), Expect = 1e-17 Identities = 90/103 (87%) Strand = Plus / Plus Query: 429 ggaagctggaggaagtcctggaggtttacgagcaaaggcttggcgagagcgagttccttg 488 ||||||| || || || ||||| ||||| ||||||||||| | || ||||| ||||||| Sbjct: 448 ggaagctagaagaggttctggaagtttatgagcaaaggctcagtgacagcgaattccttg 507 Query: 489 ctgggaacaagttcactcttgccgaccttgttcacctgccaaa 531 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 508 ttggaaacaagttcactcttgccgaccttgttcacctgccaaa 550 Score = 77.8 bits (39), Expect = 2e-10 Identities = 87/103 (84%) Strand = Plus / Plus Query: 269 tatcctttcctcctggggaaggatgtcctggagagggcttccatcgagcaatggctccgg 328 ||||| |||||||| || ||||||| ||| ||||||||||| || || |||||||||| Sbjct: 288 tatccgttcctccttggaaaggatgcccttgagagggcttcaattgaacaatggctccac 347 Query: 329 cacgaggagcacgccttcgatcctccgagccgggcattgttct 371 |||||||||| || ||| | |||||||||||||| ||||||| Sbjct: 348 aacgaggagcatgctttcaaccctccgagccgggccttgttct 390
>gb|AY111809.1| Zea mays CL1110_1 mRNA sequence Length = 1117 Score = 101 bits (51), Expect = 1e-17 Identities = 90/103 (87%) Strand = Plus / Plus Query: 429 ggaagctggaggaagtcctggaggtttacgagcaaaggcttggcgagagcgagttccttg 488 ||||||| || || || ||||| ||||| ||||||||||| | || ||||| ||||||| Sbjct: 448 ggaagctagaagaggttctggaagtttatgagcaaaggctcagtgacagcgaattccttg 507 Query: 489 ctgggaacaagttcactcttgccgaccttgttcacctgccaaa 531 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 508 ttggaaacaagttcactcttgccgaccttgttcacctgccaaa 550 Score = 77.8 bits (39), Expect = 2e-10 Identities = 87/103 (84%) Strand = Plus / Plus Query: 269 tatcctttcctcctggggaaggatgtcctggagagggcttccatcgagcaatggctccgg 328 ||||| |||||||| || ||||||| ||| ||||||||||| || || |||||||||| Sbjct: 288 tatccgttcctccttggaaaggatgcccttgagagggcttcaattgaacaatggctccac 347 Query: 329 cacgaggagcacgccttcgatcctccgagccgggcattgttct 371 |||||||||| || ||| | |||||||||||||| ||||||| Sbjct: 348 aacgaggagcatgctttcaaccctccgagccgggccttgttct 390
>ref|NM_001068982.1| Oryza sativa (japonica cultivar-group) Os08g0550500 (Os08g0550500) mRNA, complete cds Length = 1944 Score = 54.0 bits (27), Expect = 0.003 Identities = 75/91 (82%) Strand = Plus / Plus Query: 2400 tgaaaaacaacagaaataatagcaaatcggatggctcaagcaaacccacccaatttgatg 2459 |||||| |||||||||||| |||||| | |||||||||| ||||||| |||||||| Sbjct: 1576 tgaaaagcaacagaaataacagcaaaccagatggctcaactgaacccacttcatttgatg 1635 Query: 2460 gtaataaaggtgatgtccctgagtgacagag 2490 | ||| ||||| || | ||||||| |||||| Sbjct: 1636 gcaatgaaggtaatcttcctgagtcacagag 1666
>dbj|AK058423.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-D11, full insert sequence Length = 1944 Score = 54.0 bits (27), Expect = 0.003 Identities = 75/91 (82%) Strand = Plus / Plus Query: 2400 tgaaaaacaacagaaataatagcaaatcggatggctcaagcaaacccacccaatttgatg 2459 |||||| |||||||||||| |||||| | |||||||||| ||||||| |||||||| Sbjct: 1576 tgaaaagcaacagaaataacagcaaaccagatggctcaactgaacccacttcatttgatg 1635 Query: 2460 gtaataaaggtgatgtccctgagtgacagag 2490 | ||| ||||| || | ||||||| |||||| Sbjct: 1636 gcaatgaaggtaatcttcctgagtcacagag 1666
>gb|AC113430.2| Homo sapiens chromosome 5 clone RP11-811I15, complete sequence Length = 82406 Score = 48.1 bits (24), Expect = 0.17 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1878 atgaggcagtcaaaccctcaattg 1901 |||||||||||||||||||||||| Sbjct: 28410 atgaggcagtcaaaccctcaattg 28433
>dbj|AP006257.1| Homo sapiens genomic DNA, chromosome Un, clone:CMC-251D12, Telomere region, complete sequence Length = 39954 Score = 48.1 bits (24), Expect = 0.17 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1878 atgaggcagtcaaaccctcaattg 1901 |||||||||||||||||||||||| Sbjct: 4377 atgaggcagtcaaaccctcaattg 4354
>emb|AL606469.8| Human DNA sequence from clone RP11-371A19 on chromosome 10 Contains the 5' end of a novel gene (MGC46732) and a novel gene, complete sequence Length = 103069 Score = 46.1 bits (23), Expect = 0.67 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2141 aaggatattagcaagcaaacagatgaa 2167 ||||||||||||||||| ||||||||| Sbjct: 66416 aaggatattagcaagcatacagatgaa 66442
>gb|AC156553.17| Mus musculus chromosome 8, clone RP23-106I21, complete sequence Length = 211915 Score = 46.1 bits (23), Expect = 0.67 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1320 caaagcatgtggcattcagagac 1342 ||||||||||||||||||||||| Sbjct: 45572 caaagcatgtggcattcagagac 45550
>emb|CT831460.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA104C06, full insert sequence Length = 1015 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 ggcggggctcggcaccggcgcg 28 |||||||||||||||||||||| Sbjct: 547 ggcggggctcggcaccggcgcg 568
>ref|NM_001071616.1| Oryza sativa (japonica cultivar-group) Os10g0519700 (Os10g0519700) mRNA, complete cds Length = 944 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 ggcggggctcggcaccggcgcg 28 |||||||||||||||||||||| Sbjct: 552 ggcggggctcggcaccggcgcg 573
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 44.1 bits (22), Expect = 2.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2243 cagttgcaaagtgacaagtccattac 2268 ||||||||||||| |||||||||||| Sbjct: 4173687 cagttgcaaagtgccaagtccattac 4173662
>gb|AC134438.3| Mus musculus BAC clone RP24-470G3 from chromosome 5, complete sequence Length = 140395 Score = 44.1 bits (22), Expect = 2.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 917 aaaatgaaagaaagtaacttctttcc 942 |||||||||||||| ||||||||||| Sbjct: 89539 aaaatgaaagaaagaaacttctttcc 89564
>gb|AC051634.6| Oryza sativa chromosome 10 BAC OSJNBb0018B10 genomic sequence, complete sequence Length = 135789 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 7 ggcggggctcggcaccggcgcg 28 |||||||||||||||||||||| Sbjct: 34004 ggcggggctcggcaccggcgcg 33983
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 7 ggcggggctcggcaccggcgcg 28 |||||||||||||||||||||| Sbjct: 19576813 ggcggggctcggcaccggcgcg 19576792
>gb|AC092217.1|AC092217 Drosophila melanogaster, chromosome 2L, region 24D-24E, BAC clone BACR11D14, complete sequence Length = 158347 Score = 44.1 bits (22), Expect = 2.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2243 cagttgcaaagtgacaagtccattac 2268 ||||||||||||| |||||||||||| Sbjct: 109198 cagttgcaaagtgccaagtccattac 109223
>gb|AC126475.5| Homo sapiens 3 BAC RP11-356O23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 115086 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2403 aaaacaacagaaataatagcaa 2424 |||||||||||||||||||||| Sbjct: 28217 aaaacaacagaaataatagcaa 28196
>dbj|AK107812.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-F03, full insert sequence Length = 944 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 ggcggggctcggcaccggcgcg 28 |||||||||||||||||||||| Sbjct: 552 ggcggggctcggcaccggcgcg 573
>gb|AC004371.1|AC004371 Drosophila melanogaster DNA sequence (P1 DS06482 (D76)), complete sequence Length = 87124 Score = 44.1 bits (22), Expect = 2.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2243 cagttgcaaagtgacaagtccattac 2268 ||||||||||||| |||||||||||| Sbjct: 52636 cagttgcaaagtgccaagtccattac 52611 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 468,422,934 Number of extensions: 23864419 Number of successful extensions: 127724 Number of sequences better than 10.0: 24 Number of HSP's gapped: 127724 Number of HSP's successfully gapped: 48 Length of query: 2720 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2697 Effective length of database: 18,503,978,556 Effective search space: 49905230165532 Effective search space used: 49905230165532 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)