ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf152p09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001063101.1| Oryza sativa (japonica cultivar-group) Os06g0107000 (Os06g0107000) mRNA, partial cds Length = 1378 Score = 131 bits (66), Expect = 6e-27 Identities = 207/254 (81%) Strand = Plus / Plus Query: 46 ccaaaacttccaggttgggtcaatcgctttgctaatgctggagacgcagctttggaggct 105 ||||||||||||| ||||||||||||||| || |||||||| || || ||| | |||| Sbjct: 418 ccaaaacttccagcttgggtcaatcgcttcgcaaatgctggggatgctgctctagaggta 477 Query: 106 gctgaaactacagcagtaaagctcaaacaagcaaaaaaggagatttttactgcatgcaaa 165 ||||||| |||||||| |||||| || |||||||||||||| ||| |||||||||| Sbjct: 478 gctgaaaatacagcagaaaagctgaagcaagcaaaaaaggacattgcgggtgcatgcaaa 537 Query: 166 gctgcatccacgtatttgactggtgcgccgtcaggcacaccatcagatgtggaggataca 225 || || |||| |||||||||||||| | ||| | |||||||| ||| || || || Sbjct: 538 gcagccaccacatatttgactggtgcatcttcaagttcaccatcaaatgcagatgactca 597 Query: 226 ggtggctcaacaagcaattctctttttgaggggacatggattagaagcattattggcatc 285 || || ||||||| | |||||||||||||||||||||| | ||||| || || |||||| Sbjct: 598 ggcggttcaacaaatagttctctttttgaggggacatggctcagaagtatcatcggcatc 657 Query: 286 agtatgaagccatc 299 |||||||| ||||| Sbjct: 658 agtatgaaaccatc 671 Score = 42.1 bits (21), Expect = 4.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 460 catcatccatgaagcccacaccatgatgtgcagaaagaggagcaa 504 |||||||||||||| ||||||| |||| | ||||||||||||| Sbjct: 827 catcatccatgaaggtcacaccacaatgtaccgaaagaggagcaa 871 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 764 tctcgcccatggtggtgaaggagat 788 ||||||||||| ||||||||||||| Sbjct: 1144 tctcgcccatgttggtgaaggagat 1168
>dbj|AK069627.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024I03, full insert sequence Length = 1378 Score = 131 bits (66), Expect = 6e-27 Identities = 207/254 (81%) Strand = Plus / Plus Query: 46 ccaaaacttccaggttgggtcaatcgctttgctaatgctggagacgcagctttggaggct 105 ||||||||||||| ||||||||||||||| || |||||||| || || ||| | |||| Sbjct: 418 ccaaaacttccagcttgggtcaatcgcttcgcaaatgctggggatgctgctctagaggta 477 Query: 106 gctgaaactacagcagtaaagctcaaacaagcaaaaaaggagatttttactgcatgcaaa 165 ||||||| |||||||| |||||| || |||||||||||||| ||| |||||||||| Sbjct: 478 gctgaaaatacagcagaaaagctgaagcaagcaaaaaaggacattgcgggtgcatgcaaa 537 Query: 166 gctgcatccacgtatttgactggtgcgccgtcaggcacaccatcagatgtggaggataca 225 || || |||| |||||||||||||| | ||| | |||||||| ||| || || || Sbjct: 538 gcagccaccacatatttgactggtgcatcttcaagttcaccatcaaatgcagatgactca 597 Query: 226 ggtggctcaacaagcaattctctttttgaggggacatggattagaagcattattggcatc 285 || || ||||||| | |||||||||||||||||||||| | ||||| || || |||||| Sbjct: 598 ggcggttcaacaaatagttctctttttgaggggacatggctcagaagtatcatcggcatc 657 Query: 286 agtatgaagccatc 299 |||||||| ||||| Sbjct: 658 agtatgaaaccatc 671 Score = 42.1 bits (21), Expect = 4.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 460 catcatccatgaagcccacaccatgatgtgcagaaagaggagcaa 504 |||||||||||||| ||||||| |||| | ||||||||||||| Sbjct: 827 catcatccatgaaggtcacaccacaatgtaccgaaagaggagcaa 871 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 764 tctcgcccatggtggtgaaggagat 788 ||||||||||| ||||||||||||| Sbjct: 1144 tctcgcccatgttggtgaaggagat 1168
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 71.9 bits (36), Expect = 5e-09 Identities = 117/144 (81%) Strand = Plus / Plus Query: 156 tgcatgcaaagctgcatccacgtatttgactggtgcgccgtcaggcacaccatcagatgt 215 |||||||||||| || |||| |||||||||||||| | ||| | |||||||| ||| Sbjct: 451880 tgcatgcaaagcagccaccacatatttgactggtgcatcttcaagttcaccatcaaatgc 451939 Query: 216 ggaggatacaggtggctcaacaagcaattctctttttgaggggacatggattagaagcat 275 || || |||| || ||||||| | |||||||||||||||||||||| | ||||| || Sbjct: 451940 agatgactcaggcggttcaacaaatagttctctttttgaggggacatggctcagaagtat 451999 Query: 276 tattggcatcagtatgaagccatc 299 || |||||||||||||| ||||| Sbjct: 452000 catcggcatcagtatgaaaccatc 452023 Score = 46.1 bits (23), Expect = 0.26 Identities = 56/67 (83%) Strand = Plus / Plus Query: 60 ttgggtcaatcgctttgctaatgctggagacgcagctttggaggctgctgaaactacagc 119 ||||||||||||||| || |||||||| || || ||| | |||| ||||||| |||||| Sbjct: 451111 ttgggtcaatcgcttcgcaaatgctggggatgctgctctagaggtagctgaaaatacagc 451170 Query: 120 agtaaag 126 || |||| Sbjct: 451171 agaaaag 451177 Score = 42.1 bits (21), Expect = 4.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 460 catcatccatgaagcccacaccatgatgtgcagaaagaggagcaa 504 |||||||||||||| ||||||| |||| | ||||||||||||| Sbjct: 452179 catcatccatgaaggtcacaccacaatgtaccgaaagaggagcaa 452223 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 764 tctcgcccatggtggtgaaggagat 788 ||||||||||| ||||||||||||| Sbjct: 452496 tctcgcccatgttggtgaaggagat 452520
>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644B06 Length = 194509 Score = 71.9 bits (36), Expect = 5e-09 Identities = 117/144 (81%) Strand = Plus / Plus Query: 156 tgcatgcaaagctgcatccacgtatttgactggtgcgccgtcaggcacaccatcagatgt 215 |||||||||||| || |||| |||||||||||||| | ||| | |||||||| ||| Sbjct: 161833 tgcatgcaaagcagccaccacatatttgactggtgcatcttcaagttcaccatcaaatgc 161892 Query: 216 ggaggatacaggtggctcaacaagcaattctctttttgaggggacatggattagaagcat 275 || || |||| || ||||||| | |||||||||||||||||||||| | ||||| || Sbjct: 161893 agatgactcaggcggttcaacaaatagttctctttttgaggggacatggctcagaagtat 161952 Query: 276 tattggcatcagtatgaagccatc 299 || |||||||||||||| ||||| Sbjct: 161953 catcggcatcagtatgaaaccatc 161976 Score = 46.1 bits (23), Expect = 0.26 Identities = 56/67 (83%) Strand = Plus / Plus Query: 60 ttgggtcaatcgctttgctaatgctggagacgcagctttggaggctgctgaaactacagc 119 ||||||||||||||| || |||||||| || || ||| | |||| ||||||| |||||| Sbjct: 161064 ttgggtcaatcgcttcgcaaatgctggggatgctgctctagaggtagctgaaaatacagc 161123 Query: 120 agtaaag 126 || |||| Sbjct: 161124 agaaaag 161130 Score = 42.1 bits (21), Expect = 4.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 460 catcatccatgaagcccacaccatgatgtgcagaaagaggagcaa 504 |||||||||||||| ||||||| |||| | ||||||||||||| Sbjct: 162132 catcatccatgaaggtcacaccacaatgtaccgaaagaggagcaa 162176 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 764 tctcgcccatggtggtgaaggagat 788 ||||||||||| ||||||||||||| Sbjct: 162449 tctcgcccatgttggtgaaggagat 162473
>dbj|AK227649.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-23-K13 Length = 988 Score = 61.9 bits (31), Expect = 4e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 55 ccaggttgggtcaatcgctttgctaatgctggagacgcagctttgga 101 ||||||||||| |||||||||||||||||||| ||| |||| ||||| Sbjct: 434 ccaggttgggttaatcgctttgctaatgctggggacacagccttgga 480
>ref|NM_118700.1| Arabidopsis thaliana unknown protein (AT4G25680) mRNA, complete cds Length = 1153 Score = 61.9 bits (31), Expect = 4e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 55 ccaggttgggtcaatcgctttgctaatgctggagacgcagctttgga 101 ||||||||||| |||||||||||||||||||| ||| |||| ||||| Sbjct: 579 ccaggttgggttaatcgctttgctaatgctggggacacagccttgga 625
>gb|AY084962.1| Arabidopsis thaliana clone 122917 mRNA, complete sequence Length = 1155 Score = 61.9 bits (31), Expect = 4e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 55 ccaggttgggtcaatcgctttgctaatgctggagacgcagctttgga 101 ||||||||||| |||||||||||||||||||| ||| |||| ||||| Sbjct: 579 ccaggttgggttaatcgctttgctaatgctggggacacagccttgga 625
>gb|BT003130.1| Arabidopsis thaliana At4g25680 mRNA, complete cds Length = 759 Score = 61.9 bits (31), Expect = 4e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 55 ccaggttgggtcaatcgctttgctaatgctggagacgcagctttgga 101 ||||||||||| |||||||||||||||||||| ||| |||| ||||| Sbjct: 394 ccaggttgggttaatcgctttgctaatgctggggacacagccttgga 440
>emb|BX828491.1|CNS0A48U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH95ZF07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1328 Score = 61.9 bits (31), Expect = 4e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 55 ccaggttgggtcaatcgctttgctaatgctggagacgcagctttgga 101 ||||||||||| |||||||||||||||||||| ||| |||| ||||| Sbjct: 729 ccaggttgggttaatcgctttgctaatgctggggacacagccttgga 775
>emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 63 Length = 198777 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 56 caggttgggtcaatcgctttgctaatgctggagacgcagctttgga 101 |||||||||| |||||||||||||||||||| ||| |||| ||||| Sbjct: 171745 caggttgggttaatcgctttgctaatgctggggacacagccttgga 171790
>emb|AL050400.1|ATL73G19 Arabidopsis thaliana DNA chromosome 4, cosmid clone L73G19 (ESSA project) Length = 42446 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 56 caggttgggtcaatcgctttgctaatgctggagacgcagctttgga 101 |||||||||| |||||||||||||||||||| ||| |||| ||||| Sbjct: 20238 caggttgggttaatcgctttgctaatgctggggacacagccttgga 20283
>emb|CT830129.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA107C15, full insert sequence Length = 1069 Score = 52.0 bits (26), Expect = 0.004 Identities = 71/86 (82%) Strand = Plus / Plus Query: 1 aactgcaaccacttctgcaacgagttttgcgacaagctcggcgtgccaaaacttccaggt 60 |||||||||||||||||| ||| | | ||||| | ||||| ||| || || || ||||| Sbjct: 498 aactgcaaccacttctgcgacgtgctctgcgagaggctcgccgtccccaagctcccaggc 557 Query: 61 tgggtcaatcgctttgctaatgctgg 86 ||||| ||||| ||||| |||||||| Sbjct: 558 tgggttaatcgttttgccaatgctgg 583
>ref|NM_001071693.1| Oryza sativa (japonica cultivar-group) Os10g0533900 (Os10g0533900) mRNA, complete cds Length = 1072 Score = 52.0 bits (26), Expect = 0.004 Identities = 71/86 (82%) Strand = Plus / Plus Query: 1 aactgcaaccacttctgcaacgagttttgcgacaagctcggcgtgccaaaacttccaggt 60 |||||||||||||||||| ||| | | ||||| | ||||| ||| || || || ||||| Sbjct: 501 aactgcaaccacttctgcgacgtgctctgcgagaggctcgccgtccccaagctcccaggc 560 Query: 61 tgggtcaatcgctttgctaatgctgg 86 ||||| ||||| ||||| |||||||| Sbjct: 561 tgggttaatcgttttgccaatgctgg 586
>dbj|AK104667.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-312-A10, full insert sequence Length = 1085 Score = 52.0 bits (26), Expect = 0.004 Identities = 71/86 (82%) Strand = Plus / Plus Query: 1 aactgcaaccacttctgcaacgagttttgcgacaagctcggcgtgccaaaacttccaggt 60 |||||||||||||||||| ||| | | ||||| | ||||| ||| || || || ||||| Sbjct: 514 aactgcaaccacttctgcgacgtgctctgcgagaggctcgccgtccccaagctcccaggc 573 Query: 61 tgggtcaatcgctttgctaatgctgg 86 ||||| ||||| ||||| |||||||| Sbjct: 574 tgggttaatcgttttgccaatgctgg 599
>dbj|AK073543.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043D19, full insert sequence Length = 1058 Score = 52.0 bits (26), Expect = 0.004 Identities = 71/86 (82%) Strand = Plus / Plus Query: 1 aactgcaaccacttctgcaacgagttttgcgacaagctcggcgtgccaaaacttccaggt 60 |||||||||||||||||| ||| | | ||||| | ||||| ||| || || || ||||| Sbjct: 502 aactgcaaccacttctgcgacgtgctctgcgagaggctcgccgtccccaagctcccaggc 561 Query: 61 tgggtcaatcgctttgctaatgctgg 86 ||||| ||||| ||||| |||||||| Sbjct: 562 tgggttaatcgttttgccaatgctgg 587
>gb|AC189309.1| Brassica rapa subsp. pekinensis clone KBrB034C07, complete sequence Length = 109282 Score = 50.1 bits (25), Expect = 0.017 Identities = 40/45 (88%) Strand = Plus / Plus Query: 56 caggttgggtcaatcgctttgctaatgctggagacgcagctttgg 100 |||||||||| |||||||||||| ||||||| ||| |||| |||| Sbjct: 82274 caggttgggtgaatcgctttgctcatgctggtgacacagccttgg 82318
>gb|DQ123891.1| Zea mays RFLP probe csu03 (CBM 1.05) cDNA sequence Length = 1064 Score = 50.1 bits (25), Expect = 0.017 Identities = 64/77 (83%) Strand = Plus / Plus Query: 7 aaccacttctgcaacgagttttgcgacaagctcggcgtgccaaaacttccaggttgggtc 66 ||||| |||||| ||| | | ||||| | ||||||||| || || || ||||||||||| Sbjct: 496 aaccatttctgcgacgtgctctgcgagaggctcggcgtccccaagctcccaggttgggtg 555 Query: 67 aatcgctttgctaatgc 83 ||||||||||| ||||| Sbjct: 556 aatcgctttgccaatgc 572
>gb|AY112353.1| Zea mays CL34571_1 mRNA sequence Length = 685 Score = 50.1 bits (25), Expect = 0.017 Identities = 64/77 (83%) Strand = Plus / Plus Query: 7 aaccacttctgcaacgagttttgcgacaagctcggcgtgccaaaacttccaggttgggtc 66 ||||| |||||| ||| | | ||||| | ||||||||| || || || ||||||||||| Sbjct: 109 aaccatttctgcgacgtgctctgcgagaggctcggcgtccccaagctcccaggttgggtg 168 Query: 67 aatcgctttgctaatgc 83 ||||||||||| ||||| Sbjct: 169 aatcgctttgccaatgc 185
>ref|NM_118698.1| Arabidopsis thaliana unknown protein (AT4G25660) mRNA, complete cds Length = 1234 Score = 46.1 bits (23), Expect = 0.26 Identities = 41/47 (87%) Strand = Plus / Plus Query: 55 ccaggttgggtcaatcgctttgctaatgctggagacgcagctttgga 101 ||||||||||| ||||| |||||| ||||||| ||| |||| ||||| Sbjct: 664 ccaggttgggtgaatcgttttgctcatgctggcgacacagccttgga 710
>gb|BT010326.1| Arabidopsis thaliana At4g25660 mRNA, complete cds Length = 768 Score = 46.1 bits (23), Expect = 0.26 Identities = 41/47 (87%) Strand = Plus / Plus Query: 55 ccaggttgggtcaatcgctttgctaatgctggagacgcagctttgga 101 ||||||||||| ||||| |||||| ||||||| ||| |||| ||||| Sbjct: 394 ccaggttgggtgaatcgttttgctcatgctggcgacacagccttgga 440
>gb|AY086059.1| Arabidopsis thaliana clone 20902 mRNA, complete sequence Length = 1234 Score = 46.1 bits (23), Expect = 0.26 Identities = 41/47 (87%) Strand = Plus / Plus Query: 55 ccaggttgggtcaatcgctttgctaatgctggagacgcagctttgga 101 ||||||||||| ||||| |||||| ||||||| ||| |||| ||||| Sbjct: 664 ccaggttgggtgaatcgttttgctcatgctggcgacacagccttgga 710
>gb|BT002000.1| Arabidopsis thaliana putative protein (At4g25660) mRNA, complete cds Length = 1123 Score = 46.1 bits (23), Expect = 0.26 Identities = 41/47 (87%) Strand = Plus / Plus Query: 55 ccaggttgggtcaatcgctttgctaatgctggagacgcagctttgga 101 ||||||||||| ||||| |||||| ||||||| ||| |||| ||||| Sbjct: 632 ccaggttgggtgaatcgttttgctcatgctggcgacacagccttgga 678
>gb|AC157698.2| Xenopus tropicalis clone ISB1-207O9, complete sequence Length = 64598 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 acaagcaaaaaaggagatttt 152 ||||||||||||||||||||| Sbjct: 63162 acaagcaaaaaaggagatttt 63142
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 acgaggacgaaaaggatgcaa 415 ||||||||||||||||||||| Sbjct: 2284370 acgaggacgaaaaggatgcaa 2284350
>gb|AC120413.20| Mus musculus chromosome 5, clone RP24-458L16, complete sequence Length = 163011 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 ctcaaacaagcaaaaaaggag 147 ||||||||||||||||||||| Sbjct: 35685 ctcaaacaagcaaaaaaggag 35665
>gb|AC004662.1| Homo sapiens chromosome 1, clone hRPC.842_A_23, complete sequence Length = 119903 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 aaggagatttttactgcatgc 162 ||||||||||||||||||||| Sbjct: 106052 aaggagatttttactgcatgc 106072
>gb|AC104142.6| Drosophila melanogaster X BAC RP98-13K19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 186753 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 acgaggacgaaaaggatgcaa 415 ||||||||||||||||||||| Sbjct: 147068 acgaggacgaaaaggatgcaa 147048
>gb|AC104332.2| Homo sapiens chromosome 1 clone RP11-330C7, complete sequence Length = 183838 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 aaggagatttttactgcatgc 162 ||||||||||||||||||||| Sbjct: 182350 aaggagatttttactgcatgc 182370
>emb|AL157785.8| Human DNA sequence from clone RP11-169O16 on chromosome 10, complete sequence Length = 46283 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1036 atgatttggggttgtttgtcc 1056 ||||||||||||||||||||| Sbjct: 4966 atgatttggggttgtttgtcc 4946
>emb|AL133332.12| Human DNA sequence from clone RP5-846D11 on chromosome 1, complete sequence Length = 152100 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 aaggagatttttactgcatgc 162 ||||||||||||||||||||| Sbjct: 108030 aaggagatttttactgcatgc 108050
>ref|XM_648502.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (78.t00027) partial mRNA Length = 2277 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 aacaagcaattctctttttga 254 ||||||||||||||||||||| Sbjct: 1289 aacaagcaattctctttttga 1269
>emb|AL133504.2|DMBH7M4 Drosophila melanogaster BAC clone BACH7M4 Length = 48553 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 acgaggacgaaaaggatgcaa 415 ||||||||||||||||||||| Sbjct: 16554 acgaggacgaaaaggatgcaa 16534
>gb|AC063973.10|AC063973 Genomic Sequence For Arabidopsis thaliana Clone T6F08 From Chromosome V, complete sequence Length = 138940 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 585 cttgtgacgaccaagaattggaagctgcg 613 ||||||||| ||||||| ||||||||||| Sbjct: 44703 cttgtgacggccaagaaatggaagctgcg 44731
>gb|AC023158.28| Homo sapiens 12 BAC RP11-438D14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 146530 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 941 atgatgttcattttttaaaat 961 ||||||||||||||||||||| Sbjct: 51541 atgatgttcattttttaaaat 51561
>dbj|AB046436.1| Arabidopsis thaliana DNA, chromosome 5 centromere region, clone:T32O2 Length = 108720 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 585 cttgtgacgaccaagaattggaagctgcg 613 ||||||||| ||||||| ||||||||||| Sbjct: 31833 cttgtgacggccaagaaatggaagctgcg 31861
>dbj|AP006393.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03B16, TM0276, complete sequence Length = 91654 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 aagcaaaaaaggagattttta 154 ||||||||||||||||||||| Sbjct: 34406 aagcaaaaaaggagattttta 34426
>dbj|AP004474.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT13B22, TM0009, complete sequence Length = 77319 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 aagcaaaaaaggagattttta 154 ||||||||||||||||||||| Sbjct: 44988 aagcaaaaaaggagattttta 44968
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 caaccacttctgcaacgagtt 26 ||||||||||||||||||||| Sbjct: 3157101 caaccacttctgcaacgagtt 3157081
>ref|XM_735228.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000075.00.0) partial mRNA Length = 699 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 332 cagacgatgaaacatctgatgatga 356 ||||||||||| ||||||||||||| Sbjct: 256 cagacgatgaaccatctgatgatga 232 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 197,214,763 Number of extensions: 10809909 Number of successful extensions: 224669 Number of sequences better than 10.0: 39 Number of HSP's gapped: 224667 Number of HSP's successfully gapped: 51 Length of query: 1085 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1062 Effective length of database: 18,503,978,556 Effective search space: 19651225226472 Effective search space used: 19651225226472 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
