>P19835:CEL_HUMAN Bile salt-activated lipase precursor - Homo sapiens (Human)|
          Length = 742
 Score = 35.4 bits (80), Expect = 0.38
 Identities = 22/64 (34%), Positives = 26/64 (40%)
 Frame = -1

Query: 876 PPLSTAGTAGPSHRLPRRPRAQPAKGSAGDEGSPALRLHG*RETPRIRPARVLGTSSRPP 697
           PP+   G AGP    P      P     GD G+P +   G  ET  + P    G S  PP
Sbjct: 657 PPVPPTGDAGPPPVPPTGDSGAPPVPPTGDSGAPPVTPTGDSETAPVPPT---GDSGAPP 713

Query: 696 RQPT 685
             PT
Sbjct: 714 VPPT 717

>O68326:FTSQ_CAUCR Cell division protein ftsQ homolog - Caulobacter crescentus|
           (Caulobacter vibrioides)
          Length = 302

 Score = 33.5 bits (75), Expect = 1.5
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -2

Query: 872 PCQPQAPRALATVSPVAHGPSQQRAQPATKAHLRCG 765
           P +P+ PRA A  SP    P+ ++AQPA K H   G
Sbjct: 9   PPKPRRPRAEAPASPSKGKPAPRKAQPAAKLHAARG 44

>P16818:UL61_HCMVA Uncharacterized protein UL61 - Human cytomegalovirus (strain AD169)|
           (HHV-5) (Human herpesvirus 5)
          Length = 431

 Score = 32.7 bits (73), Expect = 2.5
 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
 Frame = +3

Query: 396 RGAPGS-----DGAPGAC--PSSTTAPPAGRGHW*LSPGAETGSLGQKIR 524
           R APG+     DGAPG    P+   AP  GRG W    G E G  G+ +R
Sbjct: 317 RAAPGARPTAPDGAPGRWDGPADGPAPGLGRGGW--GVGREAGGSGRSVR 364

>Q3SWY1:ARI5A_BOVIN AT-rich interactive domain-containing protein 5A - Bos taurus|
           (Bovine)
          Length = 592

 Score = 32.7 bits (73), Expect = 2.5
 Identities = 34/104 (32%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
 Frame = -2

Query: 980 LPPSEKECRQRSLIVILQ*NPILLDFMLINPGLFFHPCQPQAPRALATVSPVAHGPSQQR 801
           L P  K C    +  +   +P+ L     +PGL          R+LA  S V HG  + R
Sbjct: 409 LYPKPKACWVSPMTKVPAESPVPLPTFPSSPGLGHK-------RSLAEDSSV-HGSKKLR 460

Query: 800 A-QPATKAH--LRCGSTANGRHLVFVLLASSALPRARRGNPLRC 678
           A  P  K      CG+   G  L    L   ALP A RG  LRC
Sbjct: 461 AVSPFLKEANAQECGTKPRGPDLAVSCLLGPALPEAYRGTLLRC 504

>P61153:SSI_STRLI Protease inhibitor precursor - Streptomyces lividans|
          Length = 144

 Score = 32.3 bits (72), Expect = 3.2
 Identities = 24/62 (38%), Positives = 27/62 (43%)
 Frame = -2

Query: 872 PCQPQAPRALATVSPVAHGPSQQRAQPATKAHLRCGSTANGRHLVFVLLASSALPRARRG 693
           P    AP AL  V  V HG S   A P     L C  TA+G H      A+ A  RA  G
Sbjct: 34  PASLYAPSAL--VLTVGHGESAATAAPLRAVTLTCAPTASGTHP--AAAAACAELRAAHG 89

Query: 692 NP 687
           +P
Sbjct: 90  DP 91

>P61152:SSI_STRCO Subtilase-type protease inhibitor precursor - Streptomyces|
           coelicolor
          Length = 144

 Score = 32.3 bits (72), Expect = 3.2
 Identities = 24/62 (38%), Positives = 27/62 (43%)
 Frame = -2

Query: 872 PCQPQAPRALATVSPVAHGPSQQRAQPATKAHLRCGSTANGRHLVFVLLASSALPRARRG 693
           P    AP AL  V  V HG S   A P     L C  TA+G H      A+ A  RA  G
Sbjct: 34  PASLYAPSAL--VLTVGHGESAATAAPLRAVTLTCAPTASGTHP--AAAAACAELRAAHG 89

Query: 692 NP 687
           +P
Sbjct: 90  DP 91

>Q3IZY9:PSD_RHOS4 Phosphatidylserine decarboxylase proenzyme - Rhodobacter|
           sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
           158)
          Length = 232

 Score = 32.0 bits (71), Expect = 4.2
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 10/80 (12%)
 Frame = -2

Query: 839 TVSPVAHGP------SQQRAQPATKAHLRCGSTANGRHLVFV----LLASSALPRARRGN 690
           TV+ VA+ P      S  +A    + +      A+GR +  V    L+A   L   R G 
Sbjct: 116 TVTAVAYRPGKFLNASLDKASEDNERNALAIRLADGRQIAVVQIAGLVARRILCEVREGT 175

Query: 689 PLRCGSWTCVVRFGRRCDVF 630
           PL  G    ++RFG R DV+
Sbjct: 176 PLLTGERFGMIRFGSRLDVY 195

>O60292:SI1L3_HUMAN Signal-induced proliferation-associated 1-like protein 3 - Homo|
            sapiens (Human)
          Length = 1781

 Score = 32.0 bits (71), Expect = 4.3
 Identities = 20/58 (34%), Positives = 25/58 (43%)
 Frame = -1

Query: 852  AGPSHRLPRRPRAQPAKGSAGDEGSPALRLHG*RETPRIRPARVLGTSSRPPRQPTSM 679
            AG SH   RR    PA   AG       +L+    +    P  + G S  PPRQP+ M
Sbjct: 1351 AGRSHHADRRREVSPAPAVAGQSKGYRPKLYS---SGSSTPTGLAGGSRDPPRQPSDM 1405

>Q8K0V4:CNOT3_MOUSE CCR4-NOT transcription complex subunit 3 - Mus musculus (Mouse)|
          Length = 751

 Score = 32.0 bits (71), Expect = 4.3
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -1

Query: 900 ANQSRSLLPPLSTAGTAGPSHRLPRRPRAQPAKGSAGDEG 781
           A  ++++ PP      +GPS+  PR P AQP+ GS G  G
Sbjct: 369 APYAQAVAPP----NASGPSNAQPRPPSAQPSGGSGGGSG 404

>P22105:TENX_HUMAN Tenascin-X precursor - Homo sapiens (Human)|
          Length = 4289

 Score = 31.6 bits (70), Expect = 5.6
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = -1

Query: 933  FTIKPYPFRFHANQSRSLLPPLSTAGTAGPSHRLP-RRPRAQPAKGSAGDEGSPALRLHG 757
            F    Y  R  A   +SLLPP+ST+ T G   R+P  R   +  +  AG   +  + L+G
Sbjct: 4037 FPSTSYNARLQAMWGQSLLPPVSTSFTTG-GLRIPFPRDCGEEMQNGAGASRTSTIFLNG 4095

Query: 756  *RETP 742
             RE P
Sbjct: 4096 NRERP 4100

>Q9UEW3:MARCO_HUMAN Macrophage receptor MARCO - Homo sapiens (Human)|
          Length = 520

 Score = 31.2 bits (69), Expect = 7.2
 Identities = 19/47 (40%), Positives = 23/47 (48%)
 Frame = +3

Query: 396 RGAPGSDGAPGACPSSTTAPPAGRGHW*LSPGAETGSLGQKIRLGLP 536
           +GAPG  GA G           G G   + P  ETG+ G+K  LGLP
Sbjct: 210 QGAPGKQGATGTPGPQGEKGSKGDGGL-IGPKGETGTKGEKGDLGLP 255

>Q01955:CO4A3_HUMAN Collagen alpha-3(IV) chain precursor - Homo sapiens (Human)|
          Length = 1670

 Score = 31.2 bits (69), Expect = 7.2
 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +3

Query: 399 GAPGSDGAPGACPSSTTAPPAGRGHW*LSPG--AETGSLGQKIRLGLP 536
           G PG  G PGA      A P G G    +PG   E G+ G+   +GLP
Sbjct: 730 GLPGKPGLPGAKGEPAVAMPGGPG----TPGFPGERGNSGEHGEIGLP 773

>Q9YIB4:CO1A1_CYNPY Collagen alpha-1(I) chain precursor - Cynops pyrrhogaster (Japanese|
           common newt)
          Length = 1450

 Score = 31.2 bits (69), Expect = 7.2
 Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = +3

Query: 396 RGAPGSDGAPGA-CPSSTTAPPAGRGHW*LSPGA--ETGSLGQKIRLGLP 536
           RG+PG  G PGA  P+    PP   G     PGA  E+G  G K   G P
Sbjct: 782 RGSPGERGEPGAPGPAGICGPPGADG----QPGAKGESGDAGPKGDAGAP 827

>P02457:CO1A1_CHICK Collagen alpha-1(I) chain precursor - Gallus gallus (Chicken)|
          Length = 1453

 Score = 31.2 bits (69), Expect = 7.2
 Identities = 22/50 (44%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
 Frame = +3

Query: 396 RGAPGSDGAPG-ACPSSTTAPPAGRGHW*LSPGA--ETGSLGQKIRLGLP 536
           RGAPG  G PG   P+    PP   G     PGA  ETG  G K   G P
Sbjct: 785 RGAPGDRGEPGPPGPAGFAGPPGADG----QPGAKGETGDAGAKGDAGPP 830



 Score = 30.8 bits (68), Expect = 9.4
 Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
 Frame = +3

Query: 396 RGAPGSDGAPGACP-SSTTAPPAGRGHW*LSPGA-----ETGSLGQKIRLGLP 536
           RGAPGS G PGA   +    PP  RG    SPGA       G  G+    GLP
Sbjct: 476 RGAPGSRGFPGADGIAGPKGPPGERG----SPGAVGPKGSPGEAGRPGEAGLP 524

>Q63425:PRAX_RAT Periaxin - Rattus norvegicus (Rat)|
          Length = 1383

 Score = 31.2 bits (69), Expect = 7.3
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = -1

Query: 837  RLPRRPRAQPAKGSAGDEGSPALRLHG*RETPRIRPARV 721
            RLPR   A P+KGS G EG  A +     ++P+ R  RV
Sbjct: 1299 RLPRVGLASPSKGSKGQEGDAASKSPVGEKSPKFRFPRV 1337

>P35706:SSI2_STRLO Trypsin inhibitor STI2 precursor - Streptomyces longisporus|
          Length = 144

 Score = 30.8 bits (68), Expect = 9.4
 Identities = 18/43 (41%), Positives = 19/43 (44%)
 Frame = -2

Query: 872 PCQPQAPRALATVSPVAHGPSQQRAQPATKAHLRCGSTANGRH 744
           P    AP AL  V  V HG S   A P     L C  TA+G H
Sbjct: 34  PASLYAPSAL--VLTVGHGTSAAAASPLRAVTLNCAPTASGTH 74

>Q92IU5:PSD_RICCN Phosphatidylserine decarboxylase proenzyme - Rickettsia conorii|
          Length = 231

 Score = 30.8 bits (68), Expect = 9.4
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = -2

Query: 761 TANGRHLVFVLLASSALPRA----RRGNPLRCGSWTCVVRFGRRCDVF 630
           TA G+ +VFV +A     R       GN ++ G    ++RFG R DV+
Sbjct: 146 TAQGQKIVFVQIAGLIARRIVCDLEEGNEVKTGERYGIIRFGSRVDVY 193

>P25318:CO8A2_MOUSE Collagen alpha-2(VIII) chain precursor - Mus musculus (Mouse)|
          Length = 699

 Score = 30.8 bits (68), Expect = 9.4
 Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +3

Query: 396 RGAPGSDGAPGACPSSTTAPPAGRGHW*LSPGAE--TGSLGQKIRLGLP 536
           RG PG+ G PG  P+     P   G     PG     G+LGQK  LGLP
Sbjct: 407 RGLPGAHGPPG--PTGPKGEPGFTGR----PGGPGVAGALGQKGDLGLP 449

>P25067:CO8A2_HUMAN Collagen alpha-2(VIII) chain precursor - Homo sapiens (Human)|
          Length = 703

 Score = 30.8 bits (68), Expect = 9.4
 Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
 Frame = +3

Query: 399 GAPGSDGAPGACPSSTTAPPAGRGHW*LSPGAE--TGSLGQKIRLGLP 536
           G PG  G PGA        P G   +   PG     G+LGQK  LGLP
Sbjct: 406 GVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLP 453

>O46392:CO1A2_CANFA Collagen alpha-2(I) chain precursor - Canis familiaris (Dog)|
          Length = 1366

 Score = 30.8 bits (68), Expect = 9.4
 Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +3

Query: 396 RGAPGSDGAPGA-CPSSTTAPPAGRGHW*LSPGAETGSLGQKIRLGLP 536
           RG+PGS G PGA  P+    PP  RG     P    G  G   R G P
Sbjct: 399 RGSPGSRGLPGADGPAGVMGPPGPRGA--TGPAGVRGPNGDSGRPGEP 444

>Q3ULB5:PAK6_MOUSE Serine/threonine-protein kinase PAK 6 - Mus musculus (Mouse)|
          Length = 682

 Score = 30.8 bits (68), Expect = 9.5
 Identities = 20/72 (27%), Positives = 30/72 (41%)
 Frame = -1

Query: 900 ANQSRSLLPPLSTAGTAGPSHRLPRRPRAQPAKGSAGDEGSPALRLHG*RETPRIRPARV 721
           + Q      PL+T+ T+ P   L   P A P  G +   GS           PR R A++
Sbjct: 312 SEQPMGTFSPLTTSDTSSPQKSLRTAPAAGPLPGRSSPAGS-----------PRTRHAQI 360

Query: 720 LGTSSRPPRQPT 685
             ++   P+ PT
Sbjct: 361 STSNLYLPQDPT 372

>Q9I3P8:FLHF_PSEAE Flagellar biosynthesis protein flhF - Pseudomonas aeruginosa|
          Length = 429

 Score = 30.8 bits (68), Expect = 9.5
 Identities = 31/111 (27%), Positives = 44/111 (39%), Gaps = 12/111 (10%)
 Frame = +1

Query: 625 WRKTSHRRPKRTTHVQLPHRSGLPRR----------ARGSAEDASRTNTRCLPLAVEPQR 774
           W +  H+RP++    +   R GLP            A G    A R     L  AV+   
Sbjct: 143 WGQLQHQRPQQANLWRRLQRMGLPAELSKPLLERVAAVGDTRQAWRMLLAHLSRAVQTPE 202

Query: 775 R*AFVAG*ALCWLGPWATGETVARARGACG--*QGWKKRPGLISMKSKRIG 921
           +    AG  L  +GP   G+T   A+ A     +   +   L+SM S RIG
Sbjct: 203 QDPLDAGGVLALVGPAGAGKTTTLAKMAARYVLKYGAQSLALVSMDSYRIG 253

>Q28083:COBA1_BOVIN Collagen alpha-1(XI) chain precursor - Bos taurus (Bovine)|
          Length = 911

 Score = 30.8 bits (68), Expect = 9.5
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = -1

Query: 864 TAGTAGPSHRLPRRPRAQPAKGSAGDEGSP 775
           +AGTAGP   LP RP  Q   G AG++G+P
Sbjct: 831 SAGTAGPIG-LPGRPGPQGPPGPAGEKGAP 859


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 166,354,321
Number of extensions: 3477075
Number of successful extensions: 12865
Number of sequences better than 10.0: 23
Number of HSP's gapped: 12600
Number of HSP's successfully gapped: 24
Length of query: 344
Length of database: 100,686,439
Length adjustment: 114
Effective length of query: 230
Effective length of database: 69,416,809
Effective search space: 15965866070
Effective search space used: 15965866070
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)