ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf159f08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK063232:Os11g0557900 | 256 | 2e-68 | 2 | AK061428:Os01g0164400 | 31 | 1.1 | 3 | AK122178:Os06g0106800 | 25 | 1.2 | 4 | AK105911:Os06g0106800 | 25 | 1.2 | 5 | AK105782:Os06g0106800 | 25 | 1.2 | 6 | AK105650:Os06g0106800 | 25 | 1.2 | 7 | AK073364:Os06g0106800 | 25 | 1.2 | 8 | AK102333:Os12g0271600 | 30 | 2.4 | 9 | AK070395:Os12g0271600 | 30 | 2.4 | 10 | AK103564:Os04g0382200 | 30 | 3.1 | 11 | AK120466:Os02g0505400 | 29 | 5.3 | 12 | AK102812:Os02g0505400 | 29 | 5.3 | 13 | AK106333:Os01g0575200 | 28 | 6.9 | 14 | Os12g0288300:Os12g0288300 | 28 | 9.1 | 15 | AK120657:Os06g0595800 | 28 | 9.1 |
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>AK063232:Os11g0557900 | Length = 137 Score = 256 bits (654), Expect = 2e-68 Identities = 125/134 (93%), Positives = 132/134 (98%) Frame = +3 Query: 147 ASAAYLETDENLEALISRIEQKSRKIETLLKQSKPVEALKTALEGSPLKTRDERCKSANW 326 ++AAYL+ DENLEA+ISRIEQKSRKIETLLKQSKPVEALKTALEG+PLKTRDERCKSANW Sbjct: 4 SAAAYLDADENLEAIISRIEQKSRKIETLLKQSKPVEALKTALEGTPLKTRDERCKSANW 63 Query: 327 IVVHRAMMAIRDIDGMFNSLDTEYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTERAGL 506 IVVHRAMMAIRD+DGMFNSLD EYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTE+AGL Sbjct: 64 IVVHRAMMAIRDVDGMFNSLDPEYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTEKAGL 123 Query: 507 GCILRSLADTVNTV 548 GCILRSLADTVNTV Sbjct: 124 GCILRSLADTVNTV 137
>AK061428:Os01g0164400 | Length = 283 Score = 31.2 bits (69), Expect = 1.1 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = +2 Query: 113 APSEAGRPGRDGFGGVPRDGREPGGPHQPHRAEVTQDRDPP 235 AP+ GR G+GG RD GG H P+R + R P Sbjct: 242 APAYGHGGGRGGYGGGRRDNFRDGGGHGPNRHQGGGSRSRP 282
>AK122178:Os06g0106800 | Length = 499 Score = 25.4 bits (54), Expect(2) = 1.2 Identities = 26/77 (33%), Positives = 31/77 (40%) Frame = +2 Query: 317 GELDRGAPRHDGDQGHRWHVQLTGYRVL*HPHEVPVQRFVHRRPADV*PVPQNT*EADGE 496 G R PRH Q HR +Q+ V H H + VHRR A P A G Sbjct: 386 GHPGRPLPRHLHRQRHRHALQVAQVPVDLHRH----RGGVHRRHAGAVPA------AAGG 435 Query: 497 SRLRMHTAVTRRHCQHR 547 +R R+ V H HR Sbjct: 436 ARWRL--PVPHGHAAHR 450 Score = 24.3 bits (51), Expect(2) = 1.2 Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%) Frame = +2 Query: 134 PGRDGFGGVPRDGREPGG-PHQP 199 PGR G GGV + GR+ GG P +P Sbjct: 370 PGRGGHGGV-QGGRQAGGHPGRP 391
>AK105911:Os06g0106800 | Length = 499 Score = 25.4 bits (54), Expect(2) = 1.2 Identities = 26/77 (33%), Positives = 31/77 (40%) Frame = +2 Query: 317 GELDRGAPRHDGDQGHRWHVQLTGYRVL*HPHEVPVQRFVHRRPADV*PVPQNT*EADGE 496 G R PRH Q HR +Q+ V H H + VHRR A P A G Sbjct: 386 GHPGRPLPRHLHRQRHRHALQVAQVPVDLHRH----RGGVHRRHAGAVPA------AAGG 435 Query: 497 SRLRMHTAVTRRHCQHR 547 +R R+ V H HR Sbjct: 436 ARWRL--PVPHGHAAHR 450 Score = 24.3 bits (51), Expect(2) = 1.2 Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%) Frame = +2 Query: 134 PGRDGFGGVPRDGREPGG-PHQP 199 PGR G GGV + GR+ GG P +P Sbjct: 370 PGRGGHGGV-QGGRQAGGHPGRP 391
>AK105782:Os06g0106800 | Length = 499 Score = 25.4 bits (54), Expect(2) = 1.2 Identities = 26/77 (33%), Positives = 31/77 (40%) Frame = +2 Query: 317 GELDRGAPRHDGDQGHRWHVQLTGYRVL*HPHEVPVQRFVHRRPADV*PVPQNT*EADGE 496 G R PRH Q HR +Q+ V H H + VHRR A P A G Sbjct: 386 GHPGRPLPRHLHRQRHRHALQVAQVPVDLHRH----RGGVHRRHAGAVPA------AAGG 435 Query: 497 SRLRMHTAVTRRHCQHR 547 +R R+ V H HR Sbjct: 436 ARWRL--PVPHGHAAHR 450 Score = 24.3 bits (51), Expect(2) = 1.2 Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%) Frame = +2 Query: 134 PGRDGFGGVPRDGREPGG-PHQP 199 PGR G GGV + GR+ GG P +P Sbjct: 370 PGRGGHGGV-QGGRQAGGHPGRP 391
>AK105650:Os06g0106800 | Length = 499 Score = 25.4 bits (54), Expect(2) = 1.2 Identities = 26/77 (33%), Positives = 31/77 (40%) Frame = +2 Query: 317 GELDRGAPRHDGDQGHRWHVQLTGYRVL*HPHEVPVQRFVHRRPADV*PVPQNT*EADGE 496 G R PRH Q HR +Q+ V H H + VHRR A P A G Sbjct: 386 GHPGRPLPRHLHRQRHRHALQVAQVPVDLHRH----RGGVHRRHAGAVPA------AAGG 435 Query: 497 SRLRMHTAVTRRHCQHR 547 +R R+ V H HR Sbjct: 436 ARWRL--PVPHGHAAHR 450 Score = 24.3 bits (51), Expect(2) = 1.2 Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%) Frame = +2 Query: 134 PGRDGFGGVPRDGREPGG-PHQP 199 PGR G GGV + GR+ GG P +P Sbjct: 370 PGRGGHGGV-QGGRQAGGHPGRP 391
>AK073364:Os06g0106800 | Length = 499 Score = 25.4 bits (54), Expect(2) = 1.2 Identities = 26/77 (33%), Positives = 31/77 (40%) Frame = +2 Query: 317 GELDRGAPRHDGDQGHRWHVQLTGYRVL*HPHEVPVQRFVHRRPADV*PVPQNT*EADGE 496 G R PRH Q HR +Q+ V H H + VHRR A P A G Sbjct: 386 GHPGRPLPRHLHRQRHRHALQVAQVPVDLHRH----RGGVHRRHAGAVPA------AAGG 435 Query: 497 SRLRMHTAVTRRHCQHR 547 +R R+ V H HR Sbjct: 436 ARWRL--PVPHGHAAHR 450 Score = 24.3 bits (51), Expect(2) = 1.2 Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%) Frame = +2 Query: 134 PGRDGFGGVPRDGREPGG-PHQP 199 PGR G GGV + GR+ GG P +P Sbjct: 370 PGRGGHGGV-QGGRQAGGHPGRP 391
>AK102333:Os12g0271600 | Length = 461 Score = 30.0 bits (66), Expect = 2.4 Identities = 19/60 (31%), Positives = 29/60 (48%) Frame = +3 Query: 141 EMASAAYLETDENLEALISRIEQKSRKIETLLKQSKPVEALKTALEGSPLKTRDERCKSA 320 E A+ E + LEA +E E LK+++ EA K A+EG + R++ K A Sbjct: 326 EAVRASENEAIKKLEAARKEMEDMELATEEALKRAEMAEAAKRAVEGELRRWREKEQKKA 385
>AK070395:Os12g0271600 | Length = 647 Score = 30.0 bits (66), Expect = 2.4 Identities = 19/60 (31%), Positives = 29/60 (48%) Frame = +3 Query: 141 EMASAAYLETDENLEALISRIEQKSRKIETLLKQSKPVEALKTALEGSPLKTRDERCKSA 320 E A+ E + LEA +E E LK+++ EA K A+EG + R++ K A Sbjct: 512 EAVRASENEAIKKLEAARKEMEDMELATEEALKRAEMAEAAKRAVEGELRRWREKEQKKA 571
>AK103564:Os04g0382200 | Length = 688 Score = 29.6 bits (65), Expect = 3.1 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 4/43 (9%) Frame = +3 Query: 411 MKYLYRGLSTGDRPTCDQCLKIHEKLTERAGL----GCILRSL 527 +K + R L TG+R CDQ L + ++L + + GCI++ L Sbjct: 309 VKTVVRSLLTGERRICDQVLAVSDELRDECFVESTKGCIMQIL 351
>AK120466:Os02g0505400 | Length = 689 Score = 28.9 bits (63), Expect = 5.3 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 4/44 (9%) Frame = +3 Query: 411 MKYLYRGLSTGDRPTCDQCLKIHEKLTERAGL----GCILRSLA 530 +K + R L G+R CDQ L + ++L E + GCI++ L+ Sbjct: 307 VKTVVRVLLAGERRLCDQVLSVSDELREECFIESTKGCIMQILS 350
>AK102812:Os02g0505400 | Length = 689 Score = 28.9 bits (63), Expect = 5.3 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 4/44 (9%) Frame = +3 Query: 411 MKYLYRGLSTGDRPTCDQCLKIHEKLTERAGL----GCILRSLA 530 +K + R L G+R CDQ L + ++L E + GCI++ L+ Sbjct: 307 VKTVVRVLLAGERRLCDQVLSVSDELREECFIESTKGCIMQILS 350
>AK106333:Os01g0575200 | Length = 391 Score = 28.5 bits (62), Expect = 6.9 Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Frame = +2 Query: 107 GSAPSEAGRPGRDGFGGVPRDGREPGGPHQPHRAEVTQ-DRDPPQXXXXXXXXXXXXXXX 283 G A + AG P DG GGV R G G PH P +V + D+ + Sbjct: 291 GLAVAAAGEPDGDGDGGVRRGG--AGAPH-PGMPQVDEGDQRAVRLRRHLLAAASSQGHR 347 Query: 284 XXQDPRRAMQVGELDRG-APRHDGDQGHR 367 Q P R + L+RG PR D + G R Sbjct: 348 QHQAPDRGRR---LERGVVPRGDDEGGER 373
>Os12g0288300:Os12g0288300 | Length = 142 Score = 28.1 bits (61), Expect = 9.1 Identities = 16/35 (45%), Positives = 18/35 (51%) Frame = +1 Query: 25 SRGSRRTSGKQARRGRRCCWTAGARLGRICAVGSG 129 +RGSRR + A RG R A RL R A G G Sbjct: 17 ARGSRRPAESGATRGGRRRAAAAGRLARRAATGEG 51
>AK120657:Os06g0595800 | Length = 431 Score = 28.1 bits (61), Expect = 9.1 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 3/29 (10%) Frame = -1 Query: 107 RPRRA---PAVQQHLRPRRACLPEVRRLP 30 RPRRA P + +HL PR P+ RR P Sbjct: 338 RPRRAAHQPRLHRHLHPRPPLRPQARRPP 366 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 22,735,857 Number of extensions: 476267 Number of successful extensions: 1476 Number of sequences better than 10.0: 15 Number of HSP's gapped: 1475 Number of HSP's successfully gapped: 20 Length of query: 307 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 207 Effective length of database: 11,395,755 Effective search space: 2358921285 Effective search space used: 2358921285 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
