>Q4KLF8:ARPC5_RAT Actin-related protein 2/3 complex subunit 5 - Rattus norvegicus|
           (Rat)
          Length = 151
 Score = 58.2 bits (139), Expect = 5e-08
 Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
 Frame = +3

Query: 219 KIETLLKQSKPVEALKTALEGSPLKTRDERCKSANWIVVHRAMMAIR--DIDGMFNSLDT 392
           ++++ L+Q     AL+ AL+  P+ T+ +  K     +V + +++ +  DI+    SLD 
Sbjct: 41  EVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDK 100

Query: 393 EYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTERAGLGCILRSL 527
              D+LMKY+Y+G  +    +    L+ HEK     G+G I+R L
Sbjct: 101 NGVDLLMKYIYKGFESPSDNSSAMLLQWHEKALAAGGVGSIVRVL 145

>Q5R516:ARPC5_PONPY Actin-related protein 2/3 complex subunit 5 - Pongo pygmaeus|
           (Orangutan)
          Length = 151

 Score = 58.2 bits (139), Expect = 5e-08
 Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
 Frame = +3

Query: 219 KIETLLKQSKPVEALKTALEGSPLKTRDERCKSANWIVVHRAMMAIR--DIDGMFNSLDT 392
           ++++ L+Q     AL+ AL+  P+ T+ +  K     +V + +++ +  DI+    SLD 
Sbjct: 41  EVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDK 100

Query: 393 EYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTERAGLGCILRSL 527
              D+LMKY+Y+G  +    +    L+ HEK     G+G I+R L
Sbjct: 101 NGVDLLMKYIYKGFESPSDNSSAMLLQWHEKALAAGGVGSIVRVL 145

>O15511:ARPC5_HUMAN Actin-related protein 2/3 complex subunit 5 - Homo sapiens (Human)|
          Length = 151

 Score = 58.2 bits (139), Expect = 5e-08
 Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
 Frame = +3

Query: 219 KIETLLKQSKPVEALKTALEGSPLKTRDERCKSANWIVVHRAMMAIR--DIDGMFNSLDT 392
           ++++ L+Q     AL+ AL+  P+ T+ +  K     +V + +++ +  DI+    SLD 
Sbjct: 41  EVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDK 100

Query: 393 EYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTERAGLGCILRSL 527
              D+LMKY+Y+G  +    +    L+ HEK     G+G I+R L
Sbjct: 101 NGVDLLMKYIYKGFESPSDNSSAMLLQWHEKALAAGGVGSIVRVL 145

>Q9CPW4:ARPC5_MOUSE Actin-related protein 2/3 complex subunit 5 - Mus musculus (Mouse)|
          Length = 151

 Score = 57.4 bits (137), Expect = 8e-08
 Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
 Frame = +3

Query: 219 KIETLLKQSKPVEALKTALEGSPLKTRDERCKSANWIVVHRAMMAIR--DIDGMFNSLDT 392
           ++++ L+Q     AL+ AL+  P+ T+ +  K     +V + +++ +  DI+    SLD 
Sbjct: 41  EVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDK 100

Query: 393 EYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTERAGLGCILRSL 527
              D+LMKY+Y+G  +    +    L+ HEK     G+G I+R L
Sbjct: 101 NGVDLLMKYIYKGFESPSDNSSAVLLQWHEKALAAGGVGSIVRVL 145

>Q3SYX9:ARPC5_BOVIN Actin-related protein 2/3 complex subunit 5 - Bos taurus (Bovine)|
          Length = 151

 Score = 57.4 bits (137), Expect = 8e-08
 Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
 Frame = +3

Query: 219 KIETLLKQSKPVEALKTALEGSPLKTRDERCKSANWIVVHRAMMAIR--DIDGMFNSLDT 392
           ++++ L+Q     AL+ AL+  P+ T+ +  K     +V + +++ +  DI+    SLD 
Sbjct: 41  EVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDK 100

Query: 393 EYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTERAGLGCILRSL 527
              D+LMKY+Y+G  +    +    L+ HEK     G+G I+R L
Sbjct: 101 NGVDLLMKYIYKGFESPSDNSSAVLLQWHEKALAAGGVGSIVRVL 145

>Q5R4M1:ARP5L_PONPY Actin-related protein 2/3 complex subunit 5-like protein - Pongo|
           pygmaeus (Orangutan)
          Length = 153

 Score = 55.1 bits (131), Expect = 4e-07
 Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
 Frame = +3

Query: 171 DENLEALISRIEQ--KSRKIETLLKQSKPVEALKTALEGSPLKTRDERCKSANWIVVHRA 344
           DE  EA  +  E      +++ LL+Q   + A   AL  SP+ T+++  K     VV + 
Sbjct: 25  DEQEEAAAAAAEPGPDPSEVDGLLRQGDMLRAFHAALRNSPVNTKNQAVKERAQGVVLKV 84

Query: 345 MMAIR--DIDGMFNSLDTEYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTERAGLGCIL 518
           +   +  +I+    SLD    D+LMKY+Y+G       +    L+ HEK     GLG I+
Sbjct: 85  LTNFKSSEIEQAVQSLDRNGVDLLMKYIYKGFEKPTENSSAVLLQWHEKALAVGGLGSII 144

Query: 519 RSL 527
           R L
Sbjct: 145 RVL 147

>Q9BPX5:ARP5L_HUMAN Actin-related protein 2/3 complex subunit 5-like protein - Homo|
           sapiens (Human)
          Length = 153

 Score = 55.1 bits (131), Expect = 4e-07
 Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
 Frame = +3

Query: 171 DENLEALISRIEQ--KSRKIETLLKQSKPVEALKTALEGSPLKTRDERCKSANWIVVHRA 344
           DE  EA  +  E      +++ LL+Q   + A   AL  SP+ T+++  K     VV + 
Sbjct: 25  DEQEEAAAAAAEPGPDPSEVDGLLRQGDMLRAFHAALRNSPVNTKNQAVKERAQGVVLKV 84

Query: 345 MMAIR--DIDGMFNSLDTEYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTERAGLGCIL 518
           +   +  +I+    SLD    D+LMKY+Y+G       +    L+ HEK     GLG I+
Sbjct: 85  LTNFKSSEIEQAVQSLDRNGVDLLMKYIYKGFEKPTENSSAVLLQWHEKALAVGGLGSII 144

Query: 519 RSL 527
           R L
Sbjct: 145 RVL 147

>Q9D898:ARP5L_MOUSE Actin-related protein 2/3 complex subunit 5-like protein - Mus|
           musculus (Mouse)
          Length = 153

 Score = 54.7 bits (130), Expect = 5e-07
 Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
 Frame = +3

Query: 219 KIETLLKQSKPVEALKTALEGSPLKTRDERCKSANWIVVHRAMMAIR--DIDGMFNSLDT 392
           +++ LL+Q   + A   AL  SP+ T+++  K     VV + +   +  +I+    SLD 
Sbjct: 43  EVDGLLRQGDMLRAFHAALRNSPINTKNQAVKERAQGVVLKVLTNFKSSEIEQAVQSLDR 102

Query: 393 EYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTERAGLGCILRSL 527
              D+LMKY+Y+G       +    L+ HEK     GLG I+R L
Sbjct: 103 NGIDLLMKYIYKGFEKPTENSSAVLLQWHEKALAVGGLGSIIRVL 147

>Q5E963:ARP5L_BOVIN Actin-related protein 2/3 complex subunit 5-like protein - Bos|
           taurus (Bovine)
          Length = 153

 Score = 54.7 bits (130), Expect = 5e-07
 Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
 Frame = +3

Query: 159 YLETDENLEALISRIEQKSRKIETLLKQSKPVEALKTALEGSPLKTRDERCKSANWIVVH 338
           +++  E   A          +++ LL+Q   + A   AL  SP+ T+++  K     VV 
Sbjct: 23  FVDEQEEAAAAAGEPGPDPSEVDGLLRQGDMLRAFHAALRNSPVNTKNQAVKERAQGVVL 82

Query: 339 RAMMAIR--DIDGMFNSLDTEYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTERAGLGC 512
           + +   +  +I+    SLD    D+LMKY+Y+G       +    L+ HEK     GLG 
Sbjct: 83  KVLTNFKSSEIEQAVQSLDRNGIDLLMKYIYKGFEKPTENSSAVLLQWHEKALAVGGLGS 142

Query: 513 ILRSL 527
           I+R L
Sbjct: 143 IIRVL 147

>A1L108:ARP5L_RAT Actin-related protein 2/3 complex subunit 5-like protein - Rattus|
           norvegicus (Rat)
          Length = 153

 Score = 54.3 bits (129), Expect = 7e-07
 Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
 Frame = +3

Query: 219 KIETLLKQSKPVEALKTALEGSPLKTRDERCKSANWIVVHRAMMAIR--DIDGMFNSLDT 392
           +++ LL+Q   + A   AL  SP+ T+++  K     +V + +   +  +I+    SLD 
Sbjct: 43  EVDGLLRQGDMLRAFHAALRNSPINTKNQAVKERAQGIVLKVLTNFKSSEIEQAVQSLDR 102

Query: 393 EYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTERAGLGCILRSL 527
              D+LMKY+Y+G       +    L+ HEK     GLG I+R L
Sbjct: 103 NGIDLLMKYIYKGFEKPTENSSAVLLQWHEKALAVGGLGSIIRVL 147

>Q10316:ARPC5_SCHPO ARP2/3 complex 16 kDa subunit - Schizosaccharomyces pombe (Fission|
           yeast)
          Length = 152

 Score = 51.2 bits (121), Expect = 6e-06
 Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
 Frame = +3

Query: 165 ETDENLEALISRIEQKSRKIETLLKQSKPVEALKTALEGSPL--KTRDERCKSANWIVVH 338
           ET E ++A +S++  ++R   + ++    ++ LKT L   P     ++ R +  N  V  
Sbjct: 27  ETAEQVQAAVSQLIPQAR---SAIQTGNALQGLKTLLSYVPYGNDVQEVRTQYLNAFVDV 83

Query: 339 RAMMAIRDIDGMFNSLDTEYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTERAGLGCIL 518
            + +   DI        TE  D ++ ++YRGL+          L  HEK+ E +G+GCI+
Sbjct: 84  LSNIRAADIPAFVKECSTEEIDNIVNFIYRGLANPQAYNSSVLLNWHEKVVEISGIGCIV 143

Query: 519 RSL 527
           R L
Sbjct: 144 RVL 146

>P91167:ARPC5_CAEEL Probable actin-related protein 2/3 complex subunit 5 -|
           Caenorhabditis elegans
          Length = 146

 Score = 47.8 bits (112), Expect = 6e-05
 Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
 Frame = +3

Query: 216 RKIETLLKQSKPVEALKTALEGSPLKTRDERCKSANWIVVHRAMMAIR--DIDGMFNSLD 389
           +++   L+ ++   AL++ L   P    ++  K+   ++V   + A R  DI+   + L 
Sbjct: 34  QEVRQFLESNRLEYALQSVLLNPPFGHSEQELKNRAVLLVAEVIHAFRQTDIEESVHKLS 93

Query: 390 TEYYDILMKYLYRGLS-TGDRPTCDQCLKIHEKLTERAGLGCILRSLAD 533
            E  DILMKY+Y+ +    D  TC   L  H +L  + G G I+R L++
Sbjct: 94  NENGDILMKYIYKAMQLCSDSATCLSLLLWHSQLVSKFGQGSIVRVLSN 142

>Q6GPM0:R7BP_XENLA Regulator of G-protein signaling 7-binding protein - Xenopus laevis|
           (African clawed frog)
          Length = 254

 Score = 33.9 bits (76), Expect = 0.95
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = -1

Query: 764 YKPEKGSETDATKQTSSNKYDTIQQCSYLSTKQSNSKEKMSTITFCIYKVHAT 606
           YKPE+ S+      TSS+  D  QQC  +ST   N++  M  +   + K+  T
Sbjct: 164 YKPEESSDIPILDDTSSSPTDMQQQCWQVSTDIENTERDMREMKNLLSKLRET 216

>P40518:ARPC5_YEAST ARP2/3 complex 16 kDa subunit - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 154

 Score = 32.7 bits (73), Expect = 2.1
 Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
 Frame = +3

Query: 165 ETDENLEALISRIEQKSRKIETLLKQSKPVEALKTALEGSPLKTRDERCKSANWIVVHRA 344
           ET   L+ L  R+ Q  R + T       V+ L T     P  + D   K   +  V  A
Sbjct: 30  ETTVTLQELQPRMNQL-RSLATSGDSLGAVQLLTT----DPPYSADAPTKEQYFKSVLEA 84

Query: 345 MMAIR--DIDGMFNSLDTEYYDILMKYLYRGLSTGD-RPTCDQCLKIHEKLTERAGLGCI 515
           +  +R  DI  +  +L     D+L+KYLY+G+S    +      L   E++T+ +G+  I
Sbjct: 85  LTQVRQADIGNVIKNLSDSQRDVLVKYLYKGMSVPQGQKQGGVLLAWLERITQVSGVTPI 144

Query: 516 LRSLAD 533
           +  ++D
Sbjct: 145 VHYISD 150

>P35799:DPY2_CAEEL Cuticle collagen dpy-2 precursor - Caenorhabditis elegans|
          Length = 360

 Score = 32.3 bits (72), Expect = 2.8
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +2

Query: 116 PSEAGRPGRDGFGGVPRDGREPGGPHQP 199
           P  AG PG DG+ G P +   PG P  P
Sbjct: 252 PGSAGMPGEDGYAGTPGEKGWPGPPGAP 279

>P20785:CO6A1_CHICK Collagen alpha-1(VI) chain precursor - Gallus gallus (Chicken)|
          Length = 1019

 Score = 32.3 bits (72), Expect = 2.8
 Identities = 24/82 (29%), Positives = 28/82 (34%)
 Frame = +2

Query: 116 PSEAGRPGRDGFGGVPRDGREPGGPHQPHRAEVTQDRDPPQXXXXXXXXXXXXXXXXXQD 295
           P E G+PGR G  G P +   PG   +P     T D   P                    
Sbjct: 374 PGEDGKPGRQGIPGSPGEKGAPGNRGEPGPLGETGDEGSPGADGPPGERGSNGERGPPGS 433

Query: 296 PRRAMQVGELDRGAPRHDGDQG 361
           P      G+L  G P   GDQG
Sbjct: 434 PGDRGPRGDL--GEPGPPGDQG 453

>P02454:CO1A1_RAT Collagen alpha-1(I) chain precursor - Rattus norvegicus (Rat)|
          Length = 1453

 Score = 32.3 bits (72), Expect = 2.8
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = +2

Query: 122 EAGRPGRDGFGGVPRDGREPGGPHQPHRAEVTQDRDPP 235
           EAG PG  GF G P    +PG   +P    V  D  PP
Sbjct: 793 EAGPPGPAGFAGPPGADGQPGAKGEPGDTGVKGDAGPP 830

>P11087:CO1A1_MOUSE Collagen alpha-1(I) chain precursor - Mus musculus (Mouse)|
          Length = 1453

 Score = 32.3 bits (72), Expect = 2.8
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = +2

Query: 122 EAGRPGRDGFGGVPRDGREPGGPHQPHRAEVTQDRDPP 235
           EAG PG  GF G P    +PG   +P    V  D  PP
Sbjct: 793 EAGPPGPAGFAGPPGADGQPGAKGEPGDTGVKGDAGPP 830

>P20784:ROL6_CAEEL Cuticle collagen rol-6 - Caenorhabditis elegans|
          Length = 348

 Score = 32.0 bits (71), Expect = 3.6
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +2

Query: 113 APSEAGRPGRDGFGGVPRDGREPGGP 190
           A  + GRPGRDG  G+P D   PG P
Sbjct: 215 ARGQPGRPGRDGNPGMPGDCGPPGAP 240

>P16252:CUC2C_HAECO Cuticle collagen 2C - Haemonchus contortus (Barber pole worm)|
          Length = 210

 Score = 32.0 bits (71), Expect = 3.6
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +2

Query: 113 APSEAGRPGRDGFGGVPRDGREPGGPHQP 199
           AP E G  G+DG  G P +   PG P QP
Sbjct: 155 APGEKGPRGQDGHPGAPGNAGHPGQPGQP 183

>P08122:CO4A2_MOUSE Collagen alpha-2(IV) chain precursor - Mus musculus (Mouse)|
          Length = 1707

 Score = 32.0 bits (71), Expect = 3.6
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +2

Query: 128 GRPGRDGFGGVPRDGREPGGPHQP 199
           G+PG  G GG+P D  EPG P  P
Sbjct: 849 GQPGSPGLGGLPGDRGEPGDPGVP 872

>P10760:SAHH_RAT Adenosylhomocysteinase - Rattus norvegicus (Rat)|
          Length = 432

 Score = 31.6 bits (70), Expect = 4.7
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 231 LLKQSKPVEALKTALEGSPLKTRDERCKSANWIV 332
           ++ +  P+ AL+ A+EG  + T DE CK  N  V
Sbjct: 240 IITEIDPINALQAAMEGYEVTTMDEACKEGNIFV 273

>P50247:SAHH_MOUSE Adenosylhomocysteinase - Mus musculus (Mouse)|
          Length = 432

 Score = 31.6 bits (70), Expect = 4.7
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 231 LLKQSKPVEALKTALEGSPLKTRDERCKSANWIV 332
           ++ +  P+ AL+ A+EG  + T DE CK  N  V
Sbjct: 240 IITEIDPINALQAAMEGYEVTTMDEACKEGNIFV 273

>P12105:CO3A1_CHICK Collagen alpha-1(III) chain precursor - Gallus gallus (Chicken)|
          Length = 1262

 Score = 31.6 bits (70), Expect = 4.7
 Identities = 24/83 (28%), Positives = 32/83 (38%)
 Frame = +2

Query: 116 PSEAGRPGRDGFGGVPRDGREPGGPHQPHRAEVTQDRDPPQXXXXXXXXXXXXXXXXXQD 295
           P  AG PG +G+ G P +  +PG    P  A +     PP                   +
Sbjct: 187 PGHAGPPGSNGYQGPPGEPGQPGPSGPPGPAGMIGPAGPP---------------GKDGE 231

Query: 296 PRRAMQVGELDRGAPRHDGDQGH 364
           P R  + G  DRG P   G +GH
Sbjct: 232 PGRPGRNG--DRGIPGLPGHKGH 252

>O10334:Y081_NPVOP Hypothetical 24.9 kDa protein - Orgyia pseudotsugata multicapsid|
           polyhedrosis virus (OpMNPV)
          Length = 218

 Score = 30.8 bits (68), Expect = 8.0
 Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
 Frame = +3

Query: 249 PVEALKTALEGSPLKTRDERCKSANWIVVHRAMMAIRDIDGMFNSLDTEYYDILMKYLYR 428
           P +AL        L T   R KS NW  V++               D+E   +L++YLY 
Sbjct: 8   PRKALSPTALNQNLATHRRRPKSKNWTSVNKI------------KYDSE---LLLQYLYE 52

Query: 429 GLSTGDRPTCD-QCLKIHEKLTERAGLGCILRSLADTVNTV*ASFVFIEG 575
           G    DRP  D   +K+++   ++ G   +    A    +    F F  G
Sbjct: 53  GFG-ADRPYSDINVIKVYKVKVKKTGASILAHYFAHVSTSTGYEFEFHPG 101

>Q5R7E7:NGRN_PONPY Neugrin - Pongo pygmaeus (Orangutan)|
          Length = 219

 Score = 30.8 bits (68), Expect = 8.0
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = +3

Query: 393 EYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTERAGLGCILRSLADTVNT 545
           E +D+    + R L +   PT +Q LK  +K+ ++AGL  +L+ L  + NT
Sbjct: 37  EGFDVSTDVIRRVLKSKFLPTLEQKLKQDQKVLKKAGLAPLLQQLRGSGNT 87


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 135,789,182
Number of extensions: 2674830
Number of successful extensions: 9633
Number of sequences better than 10.0: 26
Number of HSP's gapped: 9497
Number of HSP's successfully gapped: 26
Length of query: 307
Length of database: 100,686,439
Length adjustment: 113
Effective length of query: 194
Effective length of database: 69,691,104
Effective search space: 13520074176
Effective search space used: 13520074176
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)