ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf162a04 |
|---|---|
| Clone Library Name | barley_pub |
>Q38924:PPAF_ARATH Iron(III)-zinc(II) purple acid phosphatase precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 469 Score = 58.2 bits (139), Expect = 5e-08 Identities = 31/68 (45%), Positives = 37/68 (54%), Gaps = 2/68 (2%) Frame = +3 Query: 483 QVRITQGNH--GSTIITCVTTVKPGSSNVLYMT*EDNLNCSAKGNHLQYTFYKYTSRYIH 656 QV +TQGNH II+ VT VKPGS V Y + A+ Y F+ YTS YIH Sbjct: 62 QVHVTQGNHEGNGVIISWVTPVKPGSKTVQYWCENEKSRKQAEATVNTYRFFNYTSGYIH 121 Query: 657 HCAIKKLK 680 HC I L+ Sbjct: 122 HCLIDDLE 129 Score = 50.4 bits (119), Expect = 1e-05 Identities = 25/50 (50%), Positives = 32/50 (64%) Frame = +1 Query: 736 IQHLIMTFL*FDTKHYYVVEKL*VEESLRKFWFRTPLKSGPDVPYRFGVI 885 I H ++ L FDTK+YY + + R+FWF P KSGPDVPY FG+I Sbjct: 120 IHHCLIDDLEFDTKYYYEIGS---GKWSRRFWFFIPPKSGPDVPYTFGLI 166
>P80366:PPAF_PHAVU Iron(III)-zinc(II) purple acid phosphatase - Phaseolus vulgaris| (Kidney bean) (French bean) Length = 432 Score = 51.6 bits (122), Expect = 5e-06 Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 2/68 (2%) Frame = +3 Query: 483 QVRITQGN--HGSTIITCVTTVKPGSSNVLYMT*EDNLNCSAKGNHLQYTFYKYTSRYIH 656 QV ITQG+ + II+ VT +PGSS V Y + ++ AKG Y F+ Y+S +IH Sbjct: 29 QVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIH 88 Query: 657 HCAIKKLK 680 H I+KLK Sbjct: 89 HTTIRKLK 96 Score = 39.7 bits (91), Expect = 0.018 Identities = 21/50 (42%), Positives = 31/50 (62%) Frame = +1 Query: 736 IQHLIMTFL*FDTKHYYVVEKL*VEESLRKFWFRTPLKSGPDVPYRFGVI 885 I H + L ++TK+YY V + + R+F F TP ++G DVPY FG+I Sbjct: 87 IHHTTIRKLKYNTKYYYEVG---LRNTTRRFSFITPPQTGLDVPYTFGLI 133
>Q09131:PPAF_SOYBN Purple acid phosphatase precursor - Glycine max (Soybean)| Length = 464 Score = 47.8 bits (112), Expect = 7e-05 Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%) Frame = +3 Query: 483 QVRITQGN--HGSTIITCVTTVKPGSSNVLYMT*EDNLNCSAKGNHLQYTFYKYTSRYIH 656 QV ITQG+ + I++ VT +PGSS V Y + + A+G + Y F+ Y+S +IH Sbjct: 56 QVHITQGDLVGKAVIVSWVTVDEPGSSEVHYWSENSDKKKIAEGKLVTYRFFNYSSGFIH 115 Query: 657 HCAIKKLK 680 H I+ L+ Sbjct: 116 HTTIRNLE 123 Score = 45.8 bits (107), Expect = 3e-04 Identities = 23/50 (46%), Positives = 31/50 (62%) Frame = +1 Query: 736 IQHLIMTFL*FDTKHYYVVEKL*VEESLRKFWFRTPLKSGPDVPYRFGVI 885 I H + L + TK+YY V + + R+FWF TP + GPDVPY FG+I Sbjct: 114 IHHTTIRNLEYKTKYYYEVG---LGNTTRQFWFVTPPEIGPDVPYTFGLI 160
>P06918:VL2_HPV05 Minor capsid protein L2 - Human papillomavirus type 5| Length = 518 Score = 35.4 bits (80), Expect = 0.34 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Frame = +2 Query: 2 EPSSQRHPSP--PRMTLPPIPISTSCSAPHRASPSPLPPATTRACRGQIH 145 E ++ HP P P + P + ST SA +P P+PP R R Q H Sbjct: 134 ETIAEIHPVPEGPSVDTPVVTTSTGSSAVLEVAPEPIPPTRVRVSRTQYH 183
>Q9UQ35:SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 - Homo sapiens (Human)| Length = 2752 Score = 34.3 bits (77), Expect = 0.77 Identities = 30/98 (30%), Positives = 41/98 (41%) Frame = +1 Query: 124 SLQGPDPCVEAAGEVDPKRAARRGSPEMTRKYGARHPMT*AGARQSRATADGHTR*RDPV 303 S P+P + P+R + R SPE+TRK AR R A++ TR R P Sbjct: 1672 SRSSPEP--KTKSRTPPRRRSSRSSPELTRK--AR-----LSRRSRSASSSPETRSRTPP 1722 Query: 304 RWCEVLPGRCGPPLLAGRAPRSWRGLSSPGIEKRNQRG 417 R P R+ R R SSP + ++RG Sbjct: 1723 RHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRG 1760
>Q02817:MUC2_HUMAN Mucin-2 precursor - Homo sapiens (Human)| Length = 5179 Score = 33.9 bits (76), Expect = 1.0 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 6/45 (13%) Frame = +2 Query: 5 PSSQRHPSPPRMTLPPIPISTSCSAPHRASPS------PLPPATT 121 P PSPP T P PI+T+ + P +PS P PP TT Sbjct: 1651 PPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTT 1695 Score = 30.8 bits (68), Expect = 8.5 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = +2 Query: 5 PSSQRHPSPPRMTLPPIPISTSCSAPHRASPSPLPPATT 121 P PSPP T P P T+ + P +PSP TT Sbjct: 1572 PPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTT 1610
>Q5U263:JHD1A_XENTR JmjC domain-containing histone demethylation protein 1A - Xenopus| tropicalis (Western clawed frog) (Silurana tropicalis) Length = 1146 Score = 33.9 bits (76), Expect = 1.0 Identities = 18/46 (39%), Positives = 22/46 (47%) Frame = +2 Query: 5 PSSQRHPSPPRMTLPPIPISTSCSAPHRASPSPLPPATTRACRGQI 142 P Q PSPP + LPP P S + P + PL RA R Q+ Sbjct: 737 PLGQSPPSPPLLLLPPSPSSAPPTPPSAQTQVPLASREERAKRRQL 782
>Q42783:BCCP_SOYBN Biotin carboxyl carrier protein of acetyl-CoA carboxylase,| chloroplast precursor - Glycine max (Soybean) Length = 262 Score = 33.9 bits (76), Expect = 1.0 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = +2 Query: 2 EPSSQRHPSPPRMTLPPIPISTSCSAPHRASPSPLPPATTRACRGQI 142 +PS P PP + PP+P ST RA+P+P ++ + + Sbjct: 139 QPSVVYSPPPPALPPPPVPASTPAPTLARATPTPTSAPAVKSAKSSL 185
>P26540:VL2_HPV5B Minor capsid protein L2 - Human papillomavirus type 5b| Length = 518 Score = 33.5 bits (75), Expect = 1.3 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Frame = +2 Query: 2 EPSSQRHPSP--PRMTLPPIPISTSCSAPHRASPSPLPPATTRACRGQIH 145 E ++ HP P P + P + ST SA +P P+PP R R H Sbjct: 134 ETIAEIHPVPEGPSVDTPVVTTSTGSSAVLEVAPEPIPPTRVRVSRTHYH 183
>P22425:VL2_HPV47 Minor capsid protein L2 - Human papillomavirus type 47| Length = 518 Score = 33.5 bits (75), Expect = 1.3 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Frame = +2 Query: 2 EPSSQRHPSP--PRMTLPPIPISTSCSAPHRASPSPLPPATTRACRGQIH 145 E ++ HP P P + P + +T SA +P P+PP R R Q H Sbjct: 134 ETIAEIHPIPEGPTIDSPVVTTTTGSSAVLEVAPEPVPPTRVRIARTQYH 183
>Q861W5:TNFL6_FELCA Tumor necrosis factor ligand superfamily member 6 - Felis| silvestris catus (Cat) Length = 280 Score = 33.5 bits (75), Expect = 1.3 Identities = 18/40 (45%), Positives = 19/40 (47%) Frame = +2 Query: 5 PSSQRHPSPPRMTLPPIPISTSCSAPHRASPSPLPPATTR 124 P +R P PP TLPP P P P PLPP TR Sbjct: 40 PGQRRPPPPPPPTLPPPP------PPPPLPPLPLPPLKTR 73
>Q6P9Q4:FHOD1_MOUSE FH1/FH2 domain-containing protein 1 - Mus musculus (Mouse)| Length = 1197 Score = 33.5 bits (75), Expect = 1.3 Identities = 19/42 (45%), Positives = 21/42 (50%) Frame = +2 Query: 5 PSSQRHPSPPRMTLPPIPISTSCSAPHRASPSPLPPATTRAC 130 PS P PP PP PI+ SC P P PLPP T +C Sbjct: 581 PSLSGGPPPPPP--PPPPITGSCPPP---PPPPLPPPATGSC 617
>P36752:VL2_HPV19 Minor capsid protein L2 - Human papillomavirus type 19| Length = 520 Score = 33.1 bits (74), Expect = 1.7 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Frame = +2 Query: 2 EPSSQRHPSP--PRMTLPPIPISTSCSAPHRASPSPLPPATTRACRGQIH 145 E ++ HP+P P P S+ SA +P P+PP+ R R Q H Sbjct: 133 ETIAEVHPTPSIPSTDTPVTTTSSGASAVLEVAPEPVPPSRVRVTRTQYH 182
>O88453:SAFB1_RAT Scaffold attachment factor B - Rattus norvegicus (Rat)| Length = 931 Score = 33.1 bits (74), Expect = 1.7 Identities = 28/90 (31%), Positives = 35/90 (38%), Gaps = 6/90 (6%) Frame = +1 Query: 190 RGSPEMTRKYGARHPMT*AGARQSRATADGHTR*RDPVRWC---EVLPGRCGPPLLAGRA 360 RG P + R+ H R + TADG RD RW + G GP + R Sbjct: 834 RGLPLLPRRDWGEHARRLEDDRAWQGTADGGMMERDQQRWQGGERSMSGHSGPGHMMNRG 893 Query: 361 PRSWRGLSSPGIEKRNQ---RGMREKKNGG 441 S RG +PG R RG + GG Sbjct: 894 GMSGRGSFAPGGASRRHVIPRGGMQAGFGG 923
>Q9FPQ6:GP1_CHLRE Vegetative cell wall protein gp1 precursor - Chlamydomonas| reinhardtii Length = 555 Score = 33.1 bits (74), Expect = 1.7 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = +2 Query: 5 PSSQRHPSPPRMT--LPPIPISTSCSAPHRASPSPLPPA 115 P S P+PP + PP P+ S + P A PSP PPA Sbjct: 225 PPSPPSPAPPSPSPPAPPSPVPPSPAPPSPAPPSPKPPA 263 Score = 32.3 bits (72), Expect = 2.9 Identities = 17/37 (45%), Positives = 19/37 (51%) Frame = +2 Query: 5 PSSQRHPSPPRMTLPPIPISTSCSAPHRASPSPLPPA 115 P S PSPP PP P S + P A PSP PP+ Sbjct: 70 PPSPAPPSPPSPA-PPSPAPPSPAPPSPAPPSPAPPS 105 Score = 31.6 bits (70), Expect = 5.0 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = +2 Query: 5 PSSQRHPSP-PRMTLPPIPISTSCSAPHRASPSPLPPA 115 P S PSP P PP P S + P A PSP PP+ Sbjct: 78 PPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPS 115 Score = 31.6 bits (70), Expect = 5.0 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = +2 Query: 5 PSSQRHPSP-PRMTLPPIPISTSCSAPHRASPSPLPPA 115 P S PSP P PP P S + P A PSP PP+ Sbjct: 83 PPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPS 120 Score = 31.6 bits (70), Expect = 5.0 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = +2 Query: 5 PSSQRHPSPPRMTLPPIPISTSCSAPHRASPSPLPPA 115 PS P+PP PP P S S +P SP+P+PP+ Sbjct: 291 PSPPPSPAPPT---PPTPPSPSPPSPVPPSPAPVPPS 324
>P50827:VL2_HPV36 Minor capsid protein L2 - Human papillomavirus type 36| Length = 518 Score = 32.3 bits (72), Expect = 2.9 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Frame = +2 Query: 2 EPSSQRHP--SPPRMTLPPIPISTSCSAPHRASPSPLPPATTRACRGQIH 145 E ++ HP P + P + ST SA +P P+PP R R Q H Sbjct: 134 ETIAEIHPVAEGPSVDTPVVTTSTGSSAVLEVAPEPIPPTRVRISRTQYH 183
>Q8BTI8:SRRM2_MOUSE Serine/arginine repetitive matrix protein 2 - Mus musculus (Mouse)| Length = 2703 Score = 32.3 bits (72), Expect = 2.9 Identities = 39/144 (27%), Positives = 55/144 (38%), Gaps = 8/144 (5%) Frame = +1 Query: 10 LPAP--------SESSAHDPASNPHLHLLQRSSPCVAIAPAAGND*SLQGPDPCVEAAGE 165 +PAP S SS+ + +P SSP A S +P + Sbjct: 1582 IPAPRALPRHSRSGSSSKERGPSPEGSSSSESSPEHAPKSRTARRGSRSSIEP--KTKSR 1639 Query: 166 VDPKRAARRGSPEMTRKYGARHPMT*AGARQSRATADGHTR*RDPVRWCEVLPGRCGPPL 345 P+R + R SPE+TRK AR R A++ R R P R P Sbjct: 1640 TPPRRRSSRSSPELTRK--AR-----VSRRSRSASSSPEIRSRTPPRRRRSPSVSSPEPT 1692 Query: 346 LAGRAPRSWRGLSSPGIEKRNQRG 417 R+ R R +SSP + ++RG Sbjct: 1693 EKSRSSRRRRSVSSPRTKTTSRRG 1716
>Q20365:RAB33_CAEEL Ras-related protein Rab-33 - Caenorhabditis elegans| Length = 307 Score = 32.3 bits (72), Expect = 2.9 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +2 Query: 20 HPSPPRMTLPPIPISTSCSAPHRASPSPLPPATTRACRG 136 HPS P+ P +P ST P+ +P P+PPA G Sbjct: 44 HPSAPQDPSPAVP-STPVRVPYPTAPPPIPPAPEAVTAG 81
>O14556:G3PT_HUMAN Glyceraldehyde-3-phosphate dehydrogenase, testis-specific - Homo| sapiens (Human) Length = 408 Score = 32.3 bits (72), Expect = 2.9 Identities = 20/58 (34%), Positives = 27/58 (46%) Frame = +2 Query: 2 EPSSQRHPSPPRMTLPPIPISTSCSAPHRASPSPLPPATTRACRGQIHAWKRQGRLIL 175 EP Q P+P R + P P PH A+P P + R I+ + R GRL+L Sbjct: 37 EPQPQPEPTPVREEIKPPPPPLP---PHPATPPPKMVSVARELTVGINGFGRIGRLVL 91
>P21917:DRD4_HUMAN D(4) dopamine receptor - Homo sapiens (Human)| Length = 467 Score = 32.3 bits (72), Expect = 2.9 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Frame = +2 Query: 26 SPPRMTLPPIPISTSCSAPH----RASPSPLPPATTRACRGQIHAWKRQGRLIL 175 +PP LPP P ++C+ P A P PP T R R +I +R+ +L Sbjct: 343 APPAPGLPPDPCGSNCAPPDAVRAAALPPQTPPQTRRRRRAKITGRERKAMRVL 396
>Q99490:CENG1_HUMAN Centaurin-gamma 1 - Homo sapiens (Human)| Length = 1192 Score = 32.3 bits (72), Expect = 2.9 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 6/43 (13%) Frame = +2 Query: 8 SSQRHP-----SPPRMTLPPIPI-STSCSAPHRASPSPLPPAT 118 +S HP SPP +TLPP P +T+ +A P P PP T Sbjct: 278 NSDLHPGPPAGSPPPLTLPPTPSPATAVTAASAQPPGPAPPIT 320
>P50794:VL2_HPV20 Minor capsid protein L2 - Human papillomavirus type 20| Length = 518 Score = 32.0 bits (71), Expect = 3.8 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = +2 Query: 2 EPSSQRHPSPPRM-TLPPIPISTS-CSAPHRASPSPLPPATTRACRGQIH 145 E ++ HP P R T P+ +TS SA +P P PPA R R Q H Sbjct: 134 ETIAEIHPGPSRPPTDTPVTSTTSGSSAVLEVAPEPTPPARVRVSRTQYH 183
>P21997:SSGP_VOLCA Sulfated surface glycoprotein 185 precursor - Volvox carteri| Length = 485 Score = 32.0 bits (71), Expect = 3.8 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +2 Query: 23 PSPPRMTLPPIPISTSCSAPHRASPSPLPPA 115 P+P LPP P T+ S P PSP PP+ Sbjct: 222 PAPNNSPLPPSPQPTASSRPPSPPPSPRPPS 252 Score = 31.6 bits (70), Expect = 5.0 Identities = 16/35 (45%), Positives = 17/35 (48%) Frame = +2 Query: 8 SSQRHPSPPRMTLPPIPISTSCSAPHRASPSPLPP 112 +S R PSPP PP P S S P P P PP Sbjct: 237 ASSRPPSPPPSPRPPSPPPPSPSPPPPPPPPPPPP 271
>O43516:WIPF1_HUMAN WAS/WASL-interacting protein family member 1 - Homo sapiens (Human)| Length = 503 Score = 31.6 bits (70), Expect = 5.0 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +2 Query: 23 PSPPRMTLPPIPISTSCSAPHRASPSPLPPA 115 P PP+ PP+P + SA +A P P PP+ Sbjct: 284 PPPPQNNKPPVPSTPRPSASSQAPPPPPPPS 314
>P10360:P53_CHICK Cellular tumor antigen p53 - Gallus gallus (Chicken)| Length = 367 Score = 31.6 bits (70), Expect = 5.0 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 6/45 (13%) Frame = +2 Query: 2 EPSSQRHPSPPRMTLPPIPISTSCS------APHRASPSPLPPAT 118 EPS P PP PP+P++ + P RA+PSP+ P+T Sbjct: 45 EPSDPPPPPPP----PPLPLAAAAPPPLNPPTPPRAAPSPVVPST 85
>Q6A7M5:IF2_PROAC Translation initiation factor IF-2 - Propionibacterium acnes| Length = 964 Score = 31.6 bits (70), Expect = 5.0 Identities = 35/148 (23%), Positives = 51/148 (34%) Frame = +1 Query: 13 PAPSESSAHDPASNPHLHLLQRSSPCVAIAPAAGND*SLQGPDPCVEAAGEVDPKRAARR 192 P P SSA ++ P L++ S P A S P P P + Sbjct: 109 PKPGRSSAARTSATPRPGLIKSSGASSQQEPPAAKPESKPTPKPGQNVPKPHAPAPKPKP 168 Query: 193 GSPEMTRKYGARHPMT*AGARQSRATADGHTR*RDPVRWCEVLPGRCGPPLLAGRAPRSW 372 G+P + K GAR G+ + A R GP AGR + Sbjct: 169 GAPSKSPKPGARPGPRPGGSAGLPSAA------------------RPGPRPGAGRRTGAP 210 Query: 373 RGLSSPGIEKRNQRGMREKKNGGRRTAG 456 R ++P + R + GG+R+ G Sbjct: 211 RPGNNPFASSQGMGQSRHRSEGGQRSGG 238
>Q08274:DMWD_MOUSE Dystrophia myotonica WD repeat-containing protein - Mus musculus| (Mouse) Length = 650 Score = 31.6 bits (70), Expect = 5.0 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = +2 Query: 5 PSSQRHPSPPRMTLPPIPISTSCSAPHRASPSPLPP 112 P+S + P+PP+ T PP P + S P A P+ PP Sbjct: 31 PTSAQTPAPPQPTQPP-PGPAAASGPGAAGPASSPP 65
>Q99MA0:CITE4_RAT Cbp/p300-interacting transactivator 4 - Rattus norvegicus (Rat)| Length = 179 Score = 31.6 bits (70), Expect = 5.0 Identities = 17/36 (47%), Positives = 19/36 (52%) Frame = +2 Query: 5 PSSQRHPSPPRMTLPPIPISTSCSAPHRASPSPLPP 112 PS R P+PP P P+ AP ASP PLPP Sbjct: 84 PSPGRMPAPPSAAGGPSPLQ---PAPGAASPLPLPP 116
>Q9C0K0:BC11B_HUMAN B-cell lymphoma/leukemia 11B - Homo sapiens (Human)| Length = 894 Score = 31.6 bits (70), Expect = 5.0 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = +2 Query: 14 QRHPSPPRMTLPPIPISTSCSAPHRASPSPLPPATTRACRGQIHAWKRQGRLIL 175 Q P P ++ PP+P P +P P PPA +++C +K Q LI+ Sbjct: 396 QPSPKSPFLSTPPLP-----PMPPGGTPPPQPPAKSKSCEFCGKTFKFQSNLIV 444
>P37370:VRP1_YEAST Verprolin - Saccharomyces cerevisiae (Baker's yeast)| Length = 817 Score = 31.2 bits (69), Expect = 6.5 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 6/49 (12%) Frame = +2 Query: 5 PSS--QRHPSPPRMTLPPIPISTSCSAPHR----ASPSPLPPATTRACR 133 PSS ++ PSPP PP+P ++ S P + + PSP P A T + R Sbjct: 642 PSSNLEKPPSPPVAAAPPLPTFSAPSLPQQSVSTSIPSPPPVAPTLSVR 690
>P50798:VL2_HPV24 Minor capsid protein L2 - Human papillomavirus type 24| Length = 523 Score = 31.2 bits (69), Expect = 6.5 Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%) Frame = +2 Query: 2 EPSSQRHPSP--PRMTLPPIPISTSCSAPHRASPSPLPPATTRACRGQIH 145 E ++ HP P P P + S SA +P P PP R R Q H Sbjct: 134 ETIAEVHPIPDVPTFDTPVVTTSKGSSAILEVAPEPTPPTRVRVSRTQYH 183
>P06419:VL2_HPV08 Minor capsid protein L2 - Human papillomavirus type 8| Length = 518 Score = 31.2 bits (69), Expect = 6.5 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Frame = +2 Query: 2 EPSSQRHPSP--PRMTLPPIPISTSCSAPHRASPSPLPPATTRACRGQIH 145 E ++ HP P P + P + S SA +P P PP R R Q H Sbjct: 134 ETIAEIHPVPEGPTIDSPVVTTSKGSSAILEVAPEPTPPTRVRVSRTQYH 183
>Q13183:S13A2_HUMAN Solute carrier family 13 member 2 - Homo sapiens (Human)| Length = 592 Score = 31.2 bits (69), Expect = 6.5 Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 3/60 (5%) Frame = +1 Query: 1 GTLLP---APSESSAHDPASNPHLHLLQRSSPCVAIAPAAGND*SLQGPDPCVEAAGEVD 171 G LP A SE AH S HLHL Q S CV + + G +L G P + G+++ Sbjct: 194 GQALPVTSASSEGRAH--LSQKHLHLTQCMSLCVCYSASIGGIATLTGTAPNLVLQGQIN 251
>Q6QD51:CCD80_RAT Coiled-coil domain-containing protein 80 precursor - Rattus| norvegicus (Rat) Length = 949 Score = 31.2 bits (69), Expect = 6.5 Identities = 16/46 (34%), Positives = 20/46 (43%) Frame = +2 Query: 14 QRHPSPPRMTLPPIPISTSCSAPHRASPSPLPPATTRACRGQIHAW 151 Q P+P TLPP P++T+ A R P TT A W Sbjct: 339 QPPPTPRATTLPPAPVTTATRATSRVVTVAARPTTTTAYPATQRPW 384
>Q8R2G6:CCD80_MOUSE Coiled-coil domain-containing protein 80 precursor - Mus musculus| (Mouse) Length = 949 Score = 31.2 bits (69), Expect = 6.5 Identities = 16/46 (34%), Positives = 20/46 (43%) Frame = +2 Query: 14 QRHPSPPRMTLPPIPISTSCSAPHRASPSPLPPATTRACRGQIHAW 151 Q P+P TLPP P++T+ A R P TT A W Sbjct: 339 QPPPTPRATTLPPAPVTTATRATSRVVTIAARPTTTTAYPATQRPW 384
>Q86V15:CASZ1_HUMAN Castor homolog 1 zinc finger protein - Homo sapiens (Human)| Length = 1044 Score = 31.2 bits (69), Expect = 6.5 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +2 Query: 29 PPRMTLPPIPISTSCSAPHRASPSPLPPAT 118 PP +L P P+++ SAP P P PPA+ Sbjct: 268 PPTPSLAPAPLASVPSAPSAPGPGPEPPAS 297
>O94989:ARHGF_HUMAN Rho guanine nucleotide exchange factor 15 - Homo sapiens (Human)| Length = 841 Score = 31.2 bits (69), Expect = 6.5 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +2 Query: 11 SQRHPSPPRMTLPPIPISTSCSAPHRASPSPLPP 112 SQ P P T P P+S ++P A SP+PP Sbjct: 87 SQTSPDSPSSTPTPSPVSRRSASPEPAPRSPVPP 120
>P41479:Y091_NPVAC Hypothetical 24.1 kDa protein in LEF4-P33 intergenic region -| Autographa californica nuclear polyhedrosis virus (AcMNPV) Length = 224 Score = 30.8 bits (68), Expect = 8.5 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = +2 Query: 23 PSPPRMTLPPIPISTSCSAPHRASPSPLPP 112 P+PP +PP P T P +P+P PP Sbjct: 65 PTPPPTPIPPTPTPTPPPTPIPPTPTPTPP 94 Score = 30.8 bits (68), Expect = 8.5 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +2 Query: 23 PSPPRMTLPPIPISTSCSAPHRASPSPLPP 112 P+PP +PP P T +P +P+P PP Sbjct: 78 PTPPPTPIPPTPTPTPPPSPIPPTPTPSPP 107
>P36749:VL2_HPV14 Minor capsid protein L2 - Human papillomavirus type 14| Length = 519 Score = 30.8 bits (68), Expect = 8.5 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 5/53 (9%) Frame = +2 Query: 2 EPSSQRHPSPPRMTLPPI--PISTSC---SAPHRASPSPLPPATTRACRGQIH 145 E ++ HP P R PP P++TS SA +P P PP+ R R Q H Sbjct: 134 ETIAEVHPGPSR---PPTDTPVTTSTGGSSAILEVAPEPTPPSRVRVTRTQYH 183
>O95359:TACC2_HUMAN Transforming acidic coiled-coil-containing protein 2 - Homo sapiens| (Human) Length = 2948 Score = 30.8 bits (68), Expect = 8.5 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = +2 Query: 8 SSQRHPSPPRMTLPPIPISTSCSAPHRASPSPLPPATTRACRG 136 + Q H P + PP+P S A P PLP A + + RG Sbjct: 503 TEQSHEVQPGVPPPPLPKEQSHEVQPGAPPPPLPKAPSESARG 545
>Q8VHF2:MUCDL_MOUSE Mucin and cadherin-like protein precursor - Mus musculus (Mouse)| Length = 831 Score = 30.8 bits (68), Expect = 8.5 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 5/43 (11%) Frame = +2 Query: 5 PSSQRHPSP-PRMTLPPI----PISTSCSAPHRASPSPLPPAT 118 P+ R P P P++ PP+ P+S+S + P PSP P A+ Sbjct: 700 PTPNRKPEPSPKLAQPPLRPPSPMSSSPTPPSSTPPSPQPKAS 742
>Q05858:FMN_CHICK Formin - Gallus gallus (Chicken)| Length = 1213 Score = 30.8 bits (68), Expect = 8.5 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +2 Query: 47 PPIPISTSCSAPHRASPSPLPPATTRACR 133 PP+P + PH A PLPP + CR Sbjct: 685 PPLPTGPTSVTPHFAFGPPLPPQLSEGCR 713 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 170,913,028 Number of extensions: 3890924 Number of successful extensions: 13246 Number of sequences better than 10.0: 42 Number of HSP's gapped: 13028 Number of HSP's successfully gapped: 52 Length of query: 318 Length of database: 100,686,439 Length adjustment: 113 Effective length of query: 205 Effective length of database: 69,691,104 Effective search space: 14286676320 Effective search space used: 14286676320 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
