ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf162a04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CT832273.1| Oryza sativa (indica cultivar-group) cDNA clone:... 84 1e-12
2ref|NM_001050951.1| Oryza sativa (japonica cultivar-group) Os01g... 84 1e-12
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 84 1e-12
4dbj|AP003344.2| Oryza sativa (japonica cultivar-group) genomic D... 84 1e-12
5dbj|AK071643.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 1e-12
6dbj|AK059025.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 1e-12
7emb|AL928631.4| Mouse DNA sequence from clone RP23-240K15 on chr... 48 0.058
8ref|XM_966249.1| PREDICTED: Tribolium castaneum similar to CG475... 44 0.91
9gb|AC091302.5| Oryza sativa chromosome 3 BAC OSJNBb0015I21 genom... 44 0.91
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.91
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.91
12gb|AC015917.30| Homo sapiens chromosome 17, clone CTD-2350C19, c... 44 0.91
13dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.91
14dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.91
15gb|AC193089.1| Homo sapiens chromosome 16 clone WI2-923N11, comp... 42 3.6
16gb|CP000454.1| Arthrobacter sp. FB24, complete genome 42 3.6
17gb|AC186974.5| Canis Familiaris chromosome 26, clone XX-245N19, ... 42 3.6
18gb|AC186053.6| Canis Familiaris chromosome 26, clone XX-221K12, ... 42 3.6
19gb|AC184830.5| Canis Familiaris chromosome 26, clone XX-4H7, com... 42 3.6
20ref|XM_001064241.1| PREDICTED: Rattus norvegicus similar to KIAA... 42 3.6
21ref|XM_343383.3| PREDICTED: Rattus norvegicus similar to KIAA105... 42 3.6
22ref|XR_014749.1| PREDICTED: Macaca mulatta calcium channel, volt... 42 3.6
23gb|DQ229107.1| Chara vulgaris chloroplast, complete genome 42 3.6
24gb|AF223563.3|AH009202S4 Homo sapiens low-voltage-activated calc... 42 3.6
25gb|AC164555.2| Mus musculus BAC clone RP23-346G13 from chromosom... 42 3.6
26gb|AC167141.2| Mus musculus BAC clone RP23-313L4 from chromosome... 42 3.6
27gb|AC116106.18| Mus musculus chromosome 16, clone RP23-23D5, com... 42 3.6
28gb|AC127553.3| Mus musculus BAC clone RP24-553F11 from chromosom... 42 3.6
29gb|AC129602.3| Mus musculus BAC clone RP23-37L24 from 16, comple... 42 3.6
30dbj|AK074965.1| Homo sapiens cDNA FLJ90484 fis, clone NT2RP30030... 42 3.6
31gb|AE006466.1| Homo sapiens 16p13.3 sequence section 5 of 8 42 3.6
32gb|AC120498.2| Homo sapiens chromosome 16 clone RP11-616M22, com... 42 3.6
33emb|AL592203.4| Human DNA sequence from clone RP11-268N1 on chro... 42 3.6
34emb|AL138885.21| Human DNA sequence from clone RP1-290I10 on chr... 42 3.6
35ref|NM_001005407.1| Homo sapiens calcium channel, voltage-depend... 42 3.6
36ref|NM_021098.2| Homo sapiens calcium channel, voltage-dependent... 42 3.6
37gb|AF051946.3|AF051946 Homo sapiens T-type calcium channel alpha... 42 3.6
38ref|NM_001030755.1| Gallus gallus LUC7-like 2 (S. cerevisiae) (L... 42 3.6
39gb|AC163707.3| Gallus gallus BAC clone CH261-71N11 from chromoso... 42 3.6
40ref|XM_722820.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 42 3.6
41gb|AF073931.1|AF073931 Homo sapiens low-voltage activated calciu... 42 3.6
42gb|AC015535.11| Mus musculus chromosome 5, clone RP23-39M18, com... 42 3.6
43gb|AC171199.1| Mus musculus BAC clone RP24-469I17 from chromosom... 42 3.6
44emb|AL031715.31|HS357D8 Human DNA sequence from clone LA16-357D8... 42 3.6
45emb|AJ420779.1|HSA420779 Homo sapiens mRNA for calcium channel, ... 42 3.6 
>emb|CT832273.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA127L24, full
           insert sequence
          Length = 2005
 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                       
Query: 818 tgagaaagttttggttcaggacccctctgaaaagtggcccagatgttccatatagatttg 877
           |||| |||||||||||||| |||||||  ||||||||||||||||||||||||| |||||
Sbjct: 636 tgaggaagttttggttcagaacccctccaaaaagtggcccagatgttccatatacatttg 695

             
Query: 878 gt 879
           ||
Sbjct: 696 gt 697



 Score = 48.1 bits (24), Expect = 0.058
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 618 cagtatacattctacaaatatacctcgagatacattcatcattgtgcaatcaagaagttg 677
           |||||||| |||||||| || |||||  ||||||||||||| ||| |||| || ||||||
Sbjct: 530 cagtatacgttctacaactacacctcaggatacattcatcactgtacaataaaaaagttg 589
to top
>ref|NM_001050951.1| Oryza sativa (japonica cultivar-group) Os01g0776600 (Os01g0776600)
           mRNA, complete cds
          Length = 2006

 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                       
Query: 818 tgagaaagttttggttcaggacccctctgaaaagtggcccagatgttccatatagatttg 877
           |||| |||||||||||||| |||||||  ||||||||||||||||||||||||| |||||
Sbjct: 694 tgaggaagttttggttcagaacccctccaaaaagtggcccagatgttccatatacatttg 753

             
Query: 878 gt 879
           ||
Sbjct: 754 gt 755



 Score = 48.1 bits (24), Expect = 0.058
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 618 cagtatacattctacaaatatacctcgagatacattcatcattgtgcaatcaagaagttg 677
           |||||||| |||||||| || |||||  ||||||||||||| ||| |||| || ||||||
Sbjct: 588 cagtatacgttctacaactacacctcaggatacattcatcactgtacaataaaaaagttg 647
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                            
Query: 818      tgagaaagttttggttcaggacccctctgaaaagtggcccagatgttccatatagatttg 877
                |||| |||||||||||||| |||||||  ||||||||||||||||||||||||| |||||
Sbjct: 32843745 tgaggaagttttggttcagaacccctccaaaaagtggcccagatgttccatatacatttg 32843686

                  
Query: 878      gt 879
                ||
Sbjct: 32843685 gt 32843684



 Score = 50.1 bits (25), Expect = 0.015
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                            
Query: 618      cagtatacattctacaaatatacctcgagatacattcatcattgtgcaatcaagaagttg 677
                |||||||| |||||||| || |||||  ||||||||||||| ||| |||| || ||||||
Sbjct: 32843925 cagtatacgttctacaactacacctcaggatacattcatcactgtacaataaaaaagttg 32843866

                     
Query: 678      aaggt 682
                 ||||
Sbjct: 32843865 gaggt 32843861
to top
>dbj|AP003344.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0413G02
          Length = 155633

 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                         
Query: 818   tgagaaagttttggttcaggacccctctgaaaagtggcccagatgttccatatagatttg 877
             |||| |||||||||||||| |||||||  ||||||||||||||||||||||||| |||||
Sbjct: 65150 tgaggaagttttggttcagaacccctccaaaaagtggcccagatgttccatatacatttg 65091

               
Query: 878   gt 879
             ||
Sbjct: 65090 gt 65089



 Score = 50.1 bits (25), Expect = 0.015
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                         
Query: 618   cagtatacattctacaaatatacctcgagatacattcatcattgtgcaatcaagaagttg 677
             |||||||| |||||||| || |||||  ||||||||||||| ||| |||| || ||||||
Sbjct: 65330 cagtatacgttctacaactacacctcaggatacattcatcactgtacaataaaaaagttg 65271

                  
Query: 678   aaggt 682
              ||||
Sbjct: 65270 gaggt 65266
to top
>dbj|AK071643.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105J09, full
           insert sequence
          Length = 2008

 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                       
Query: 818 tgagaaagttttggttcaggacccctctgaaaagtggcccagatgttccatatagatttg 877
           |||| |||||||||||||| |||||||  ||||||||||||||||||||||||| |||||
Sbjct: 694 tgaggaagttttggttcagaacccctccaaaaagtggcccagatgttccatatacatttg 753

             
Query: 878 gt 879
           ||
Sbjct: 754 gt 755



 Score = 48.1 bits (24), Expect = 0.058
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 618 cagtatacattctacaaatatacctcgagatacattcatcattgtgcaatcaagaagttg 677
           |||||||| |||||||| || |||||  ||||||||||||| ||| |||| || ||||||
Sbjct: 588 cagtatacgttctacaactacacctcaggatacattcatcactgtacaataaaaaagttg 647
to top
>dbj|AK059025.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B09, full
           insert sequence
          Length = 1536

 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                       
Query: 818 tgagaaagttttggttcaggacccctctgaaaagtggcccagatgttccatatagatttg 877
           |||| |||||||||||||| |||||||  ||||||||||||||||||||||||| |||||
Sbjct: 241 tgaggaagttttggttcagaacccctccaaaaagtggcccagatgttccatatacatttg 300

             
Query: 878 gt 879
           ||
Sbjct: 301 gt 302



 Score = 48.1 bits (24), Expect = 0.058
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 618 cagtatacattctacaaatatacctcgagatacattcatcattgtgcaatcaagaagttg 677
           |||||||| |||||||| || |||||  ||||||||||||| ||| |||| || ||||||
Sbjct: 135 cagtatacgttctacaactacacctcaggatacattcatcactgtacaataaaaaagttg 194
to top
>emb|AL928631.4| Mouse DNA sequence from clone RP23-240K15 on chromosome 4, complete
              sequence
          Length = 178426

 Score = 48.1 bits (24), Expect = 0.058
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 416    gaatgagggagaagaagaatgggg 439
              ||||||||||||||||||||||||
Sbjct: 114590 gaatgagggagaagaagaatgggg 114567
to top
>ref|XM_966249.1| PREDICTED: Tribolium castaneum similar to CG4751-PA (LOC659985),
           mRNA
          Length = 1953

 Score = 44.1 bits (22), Expect = 0.91
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 390 tggtatagaaaaaagaaaccagagaggaat 419
           ||||||||||||||||||  ||||||||||
Sbjct: 460 tggtatagaaaaaagaaagaagagaggaat 489
to top
>gb|AC091302.5| Oryza sativa chromosome 3 BAC OSJNBb0015I21 genomic sequence, complete
             sequence
          Length = 101073

 Score = 44.1 bits (22), Expect = 0.91
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 403   agaaaccagagaggaatgaggg 424
             ||||||||||||||||||||||
Sbjct: 74946 agaaaccagagaggaatgaggg 74925
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.91
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 90       cgtcgccatcgcccctgccgccggca 115
                ||||||||||||| ||||||||||||
Sbjct: 27180177 cgtcgccatcgccgctgccgccggca 27180202
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.91
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 403      agaaaccagagaggaatgaggg 424
                ||||||||||||||||||||||
Sbjct: 20553910 agaaaccagagaggaatgaggg 20553889
to top
>gb|AC015917.30| Homo sapiens chromosome 17, clone CTD-2350C19, complete sequence
          Length = 123794

 Score = 44.1 bits (22), Expect = 0.91
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 48   ctccaatccccatctccacctcctgc 73
            |||| |||||||||||||||||||||
Sbjct: 3593 ctcctatccccatctccacctcctgc 3568
to top
>dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1521_G02
          Length = 117964

 Score = 44.1 bits (22), Expect = 0.91
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 90    cgtcgccatcgcccctgccgccggca 115
             ||||||||||||| ||||||||||||
Sbjct: 81210 cgtcgccatcgccgctgccgccggca 81235
to top
>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0623F08
          Length = 154540

 Score = 44.1 bits (22), Expect = 0.91
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 90   cgtcgccatcgcccctgccgccggca 115
            ||||||||||||| ||||||||||||
Sbjct: 3380 cgtcgccatcgccgctgccgccggca 3405
to top
>gb|AC193089.1| Homo sapiens chromosome 16 clone WI2-923N11, complete sequence
          Length = 40844

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 57    ccatctccacctcctgcagcg 77
             |||||||||||||||||||||
Sbjct: 14986 ccatctccacctcctgcagcg 14966
to top
>gb|CP000454.1| Arthrobacter sp. FB24, complete genome
          Length = 4698945

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 93     cgccatcgcccctgccgccgg 113
              |||||||||||||||||||||
Sbjct: 227291 cgccatcgcccctgccgccgg 227311
to top
>gb|AC186974.5| Canis Familiaris chromosome 26, clone XX-245N19, complete sequence
          Length = 200735

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 57    ccatctccacctcctgcagcg 77
             |||||||||||||||||||||
Sbjct: 65745 ccatctccacctcctgcagcg 65765
to top
>gb|AC186053.6| Canis Familiaris chromosome 26, clone XX-221K12, complete sequence
          Length = 156281

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 57    ccatctccacctcctgcagcg 77
             |||||||||||||||||||||
Sbjct: 13383 ccatctccacctcctgcagcg 13363
to top
>gb|AC184830.5| Canis Familiaris chromosome 26, clone XX-4H7, complete sequence
          Length = 218386

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 57    ccatctccacctcctgcagcg 77
             |||||||||||||||||||||
Sbjct: 67315 ccatctccacctcctgcagcg 67335
to top
>ref|XM_001064241.1| PREDICTED: Rattus norvegicus similar to KIAA1052 protein (predicted)
            (RGD1561243_predicted), mRNA
          Length = 5137

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 61   ctccacctcctgcagcgctcc 81
            |||||||||||||||||||||
Sbjct: 4437 ctccacctcctgcagcgctcc 4457
to top
>ref|XM_343383.3| PREDICTED: Rattus norvegicus similar to KIAA1052 protein (predicted)
            (RGD1561243_predicted), mRNA
          Length = 5137

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 61   ctccacctcctgcagcgctcc 81
            |||||||||||||||||||||
Sbjct: 4437 ctccacctcctgcagcgctcc 4457
to top
>ref|XR_014749.1| PREDICTED: Macaca mulatta calcium channel, voltage-dependent, alpha
            1H subunit (CACNA1H), mRNA
          Length = 8245

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 57   ccatctccacctcctgcagcg 77
            |||||||||||||||||||||
Sbjct: 5800 ccatctccacctcctgcagcg 5780
to top
>gb|DQ229107.1| Chara vulgaris chloroplast, complete genome
          Length = 184933

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 760  ttgtagtttgatacaaagcat 780
            |||||||||||||||||||||
Sbjct: 9189 ttgtagtttgatacaaagcat 9209
to top
>gb|AF223563.3|AH009202S4 Homo sapiens low-voltage-activated calcium channel alpha13.2 subunit
             delta25B splice variant (CACNA1H) gene, exons 11 through
             36, and partial cds; and tryptase gamma 1 (TPSG1) gene,
             exon 6 and partial cds
          Length = 17799

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 57    ccatctccacctcctgcagcg 77
             |||||||||||||||||||||
Sbjct: 14271 ccatctccacctcctgcagcg 14251
to top
>gb|AC164555.2| Mus musculus BAC clone RP23-346G13 from chromosome 17, complete sequence
          Length = 211631

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 420    gagggagaagaagaatggggggagaagga 448
              ||||||||||||||||||| | |||||||
Sbjct: 101077 gagggagaagaagaatgggagaagaagga 101105
to top
>gb|AC167141.2| Mus musculus BAC clone RP23-313L4 from chromosome 16, complete sequence
          Length = 192972

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 863   ttccatatagatttggtgtga 883
             |||||||||||||||||||||
Sbjct: 20255 ttccatatagatttggtgtga 20235
to top
>gb|AC116106.18| Mus musculus chromosome 16, clone RP23-23D5, complete sequence
          Length = 252718

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 863   ttccatatagatttggtgtga 883
             |||||||||||||||||||||
Sbjct: 32522 ttccatatagatttggtgtga 32542
to top
>gb|AC127553.3| Mus musculus BAC clone RP24-553F11 from chromosome 5, complete sequence
          Length = 159693

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 50     ccaatccccatctccacctcc 70
              |||||||||||||||||||||
Sbjct: 108089 ccaatccccatctccacctcc 108069
to top
>gb|AC129602.3| Mus musculus BAC clone RP23-37L24 from 16, complete sequence
          Length = 185729

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 863   ttccatatagatttggtgtga 883
             |||||||||||||||||||||
Sbjct: 54635 ttccatatagatttggtgtga 54615
to top
>dbj|AK074965.1| Homo sapiens cDNA FLJ90484 fis, clone NT2RP3003000, highly similar to
            Voltage-dependent T-type calcium channelalpha-1H subunit
          Length = 3464

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 57   ccatctccacctcctgcagcg 77
            |||||||||||||||||||||
Sbjct: 1491 ccatctccacctcctgcagcg 1471
to top
>gb|AE006466.1| Homo sapiens 16p13.3 sequence section 5 of 8
          Length = 265786

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 57     ccatctccacctcctgcagcg 77
              |||||||||||||||||||||
Sbjct: 154272 ccatctccacctcctgcagcg 154252
to top
>gb|AC120498.2| Homo sapiens chromosome 16 clone RP11-616M22, complete sequence
          Length = 195680

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 57    ccatctccacctcctgcagcg 77
             |||||||||||||||||||||
Sbjct: 97552 ccatctccacctcctgcagcg 97532
to top
>emb|AL592203.4| Human DNA sequence from clone RP11-268N1 on chromosome 1, complete
            sequence
          Length = 181535

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 891  tgtcaaatttgctcagaatat 911
            |||||||||||||||||||||
Sbjct: 4833 tgtcaaatttgctcagaatat 4853
to top
>emb|AL138885.21| Human DNA sequence from clone RP1-290I10 on chromosome 6 Contains a
              ribosomal protein L7 (RPL7) pseudogene, the TFAP2A gene for
              transcription factor AP-2 alpha (activating
              enhancer-binding protein 2 alpha), four novel genes, a
              mitochondrial ribosomal protein L47 (MRPL47) pseudogene and
              11 CpG islands, complete sequence
          Length = 180133

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 3      aaccctcctcccagcgccatc 23
              |||||||||||||||||||||
Sbjct: 113644 aaccctcctcccagcgccatc 113664
to top
>ref|NM_001005407.1| Homo sapiens calcium channel, voltage-dependent, alpha 1H subunit
            (CACNA1H), transcript variant 2, mRNA
          Length = 8079

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 57   ccatctccacctcctgcagcg 77
            |||||||||||||||||||||
Sbjct: 6090 ccatctccacctcctgcagcg 6070
to top
>ref|NM_021098.2| Homo sapiens calcium channel, voltage-dependent, alpha 1H subunit
            (CACNA1H), transcript variant 1, mRNA
          Length = 8097

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 57   ccatctccacctcctgcagcg 77
            |||||||||||||||||||||
Sbjct: 6108 ccatctccacctcctgcagcg 6088
to top
>gb|AF051946.3|AF051946 Homo sapiens T-type calcium channel alpha 1H subunit (CACNA1H) mRNA,
            complete cds
          Length = 7762

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 57   ccatctccacctcctgcagcg 77
            |||||||||||||||||||||
Sbjct: 5939 ccatctccacctcctgcagcg 5919
to top
>ref|NM_001030755.1| Gallus gallus LUC7-like 2 (S. cerevisiae) (LUC7L2), mRNA
 emb|AJ719617.1| Gallus gallus mRNA for hypothetical protein, clone 4j8
          Length = 2208

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 175 aagcgggcggcgaggcggggg 195
           |||||||||||||||||||||
Sbjct: 29  aagcgggcggcgaggcggggg 49
to top
>gb|AC163707.3| Gallus gallus BAC clone CH261-71N11 from chromosome ul, complete
             sequence
          Length = 174599

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 175   aagcgggcggcgaggcggggg 195
             |||||||||||||||||||||
Sbjct: 63929 aagcgggcggcgaggcggggg 63949
to top
>ref|XM_722820.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY07120)
           partial mRNA
          Length = 741

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 621 tatacattctacaaatatacc 641
           |||||||||||||||||||||
Sbjct: 689 tatacattctacaaatatacc 709
to top
>gb|AF073931.1|AF073931 Homo sapiens low-voltage activated calcium channel alpha 1H mRNA,
            complete cds
          Length = 7898

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 57   ccatctccacctcctgcagcg 77
            |||||||||||||||||||||
Sbjct: 6108 ccatctccacctcctgcagcg 6088
to top
>gb|AC015535.11| Mus musculus chromosome 5, clone RP23-39M18, complete sequence
          Length = 263382

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 50     ccaatccccatctccacctcc 70
              |||||||||||||||||||||
Sbjct: 257064 ccaatccccatctccacctcc 257084
to top
>gb|AC171199.1| Mus musculus BAC clone RP24-469I17 from chromosome 16, complete
             sequence
          Length = 146976

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 406   aaccagagaggaatgagggag 426
             |||||||||||||||||||||
Sbjct: 54322 aaccagagaggaatgagggag 54342
to top
>emb|AL031715.31|HS357D8 Human DNA sequence from clone LA16-357D8 on chromosome 16, complete
             sequence
          Length = 36006

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 57    ccatctccacctcctgcagcg 77
             |||||||||||||||||||||
Sbjct: 13580 ccatctccacctcctgcagcg 13560
to top
>emb|AJ420779.1|HSA420779 Homo sapiens mRNA for calcium channel, voltage-dependent, T type,
            alpha 1Hb subunit (CACNA1HB gene)
          Length = 7044

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 57   ccatctccacctcctgcagcg 77
            |||||||||||||||||||||
Sbjct: 5842 ccatctccacctcctgcagcg 5822


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 165,716,579
Number of extensions: 8869482
Number of successful extensions: 175054
Number of sequences better than 10.0: 45
Number of HSP's gapped: 175054
Number of HSP's successfully gapped: 51
Length of query: 956
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 933
Effective length of database: 18,503,978,556
Effective search space: 17264211992748
Effective search space used: 17264211992748
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top