ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf159f01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK099030:Os05g0143300 | 482 | e-136 | 2 | AK072841:Os05g0143300 | 482 | e-136 | 3 | AK062363:Os06g0669200 | 37 | 0.040 | 4 | AK100757:Os04g0555000 | 36 | 0.090 | 5 | AK110509: | 32 | 1.3 | 6 | AK107005:Os01g0193400 | 31 | 2.9 | 7 | AK099271:Os01g0193400 | 31 | 2.9 | 8 | AK069948:Os01g0193400 | 31 | 2.9 | 9 | AY187621:Os01g0332100 | 31 | 2.9 | 10 | AK120720:Os01g0332100 | 31 | 2.9 | 11 | AK105155:Os01g0267100 | 30 | 4.9 | 12 | AK108178:Os02g0679700 | 30 | 5.0 | 13 | AK120219:Os12g0486800 | 29 | 8.4 | 14 | Os09g0306700:Os09g0306700 | 29 | 8.4 |
|---|
>AK099030:Os05g0143300 | Length = 453 Score = 482 bits (1240), Expect = e-136 Identities = 279/469 (59%), Positives = 325/469 (69%), Gaps = 14/469 (2%) Frame = +1 Query: 52 MVGDLS--LLASATASPVLLAPSKELHGV---LPFQGKRSQQQQQDAGRSAAVQLSPQQH 216 MVGDLS L A+++ASPV+LAPSKELHGV +P QGKR Q QDA AV + Sbjct: 1 MVGDLSSLLAAASSASPVVLAPSKELHGVHLPMPLQGKRPPLQPQDA----AVHIEAAAA 56 Query: 217 LLEGAYQAQQPLQMMVPGIGQXXXXXXXXXXXXX----LIDAQDSHPDSVRLSLGIAEQC 384 A+Q Q +MVPG LID QDSHPDSV+LSLGIAEQC Sbjct: 57 AAAAAFQGQ----VMVPGHAHAGAPAAFQAFAVPDMAALIDVQDSHPDSVQLSLGIAEQC 112 Query: 385 ARQEKILKFLMSGSDVKELDASLLTELTGHPMLSANMGSQPYTPDDKLSVYEFGLEEPLQ 564 +RQEKILKFL SGSDVKELD SLLTELTGH L N+G+QPY PDDKLS + Sbjct: 113 SRQEKILKFLRSGSDVKELDVSLLTELTGHQTLPINLGTQPYIPDDKLSALPISMA---- 168 Query: 565 YLAENQLILPDDKLSIYEFGSEEPLQYLSENQLIIPDPLLEFAQSQG-ALAIDENGRVIF 741 +Q +PDDKLSIYEF +EP QYL ENQL+IPDPL+EF QS G AL ID+N R++F Sbjct: 169 ----SQPYIPDDKLSIYEFELDEPQQYLPENQLVIPDPLVEFFQSHGSALTIDQNRRILF 224 Query: 742 TGSGEEMRDLLSVFLEFNVPKREPSGCKAAYLVPYFDRKRGR--NXXXXXXXXXXTAVDX 915 G+G++MR LLS+ L FN+ KRE S CK AYLVPYF+RKR + TAVD Sbjct: 225 NGNGDDMRYLLSIVLAFNMSKREISSCKTAYLVPYFERKRRSRASSHASNSKLASTAVDA 284 Query: 916 XXXXXXXXXXXXXXXXXXXXTINERDMYQNNYFHASEAFFSILLDKDNSS-TILSLKKAG 1092 I ERD+Y NYFHASEAF S+LLDKDNSS TI SLKKAG Sbjct: 285 SKSTANGKSKSSSRKKQKSKNIKERDLYPKNYFHASEAFLSMLLDKDNSSSTIHSLKKAG 344 Query: 1093 PEITELLTQCSIGIAGTGLAVLLSVVCKIAIGGRTPFAATRLLHTGVGFGLFWLSHAVNG 1272 PEI+ELLT+CSIGIAGTGLAVLLSVVCK+A G ++P AATRL++TGVG GLFWLS AVNG Sbjct: 345 PEISELLTKCSIGIAGTGLAVLLSVVCKMATGMKSPIAATRLVNTGVGLGLFWLSWAVNG 404 Query: 1273 LRNTITTVFRGPVDAKLED-EVAVKIQRSMNDILFRAVTLLAITALRFA 1416 LR+TIT++FR P D L+D EVAV+IQ+SMNDILFRA+T+LAITA +FA Sbjct: 405 LRDTITSIFRSPGDMNLKDEEVAVRIQKSMNDILFRAITILAITAFKFA 453
>AK072841:Os05g0143300 | Length = 453 Score = 482 bits (1240), Expect = e-136 Identities = 279/469 (59%), Positives = 325/469 (69%), Gaps = 14/469 (2%) Frame = +1 Query: 52 MVGDLS--LLASATASPVLLAPSKELHGV---LPFQGKRSQQQQQDAGRSAAVQLSPQQH 216 MVGDLS L A+++ASPV+LAPSKELHGV +P QGKR Q QDA AV + Sbjct: 1 MVGDLSSLLAAASSASPVVLAPSKELHGVHLPMPLQGKRPPLQPQDA----AVHIEAAAA 56 Query: 217 LLEGAYQAQQPLQMMVPGIGQXXXXXXXXXXXXX----LIDAQDSHPDSVRLSLGIAEQC 384 A+Q Q +MVPG LID QDSHPDSV+LSLGIAEQC Sbjct: 57 AAAAAFQGQ----VMVPGHAHAGAPAAFQAFAVPDMAALIDVQDSHPDSVQLSLGIAEQC 112 Query: 385 ARQEKILKFLMSGSDVKELDASLLTELTGHPMLSANMGSQPYTPDDKLSVYEFGLEEPLQ 564 +RQEKILKFL SGSDVKELD SLLTELTGH L N+G+QPY PDDKLS + Sbjct: 113 SRQEKILKFLRSGSDVKELDVSLLTELTGHQTLPINLGTQPYIPDDKLSALPISMA---- 168 Query: 565 YLAENQLILPDDKLSIYEFGSEEPLQYLSENQLIIPDPLLEFAQSQG-ALAIDENGRVIF 741 +Q +PDDKLSIYEF +EP QYL ENQL+IPDPL+EF QS G AL ID+N R++F Sbjct: 169 ----SQPYIPDDKLSIYEFELDEPQQYLPENQLVIPDPLVEFFQSHGSALTIDQNRRILF 224 Query: 742 TGSGEEMRDLLSVFLEFNVPKREPSGCKAAYLVPYFDRKRGR--NXXXXXXXXXXTAVDX 915 G+G++MR LLS+ L FN+ KRE S CK AYLVPYF+RKR + TAVD Sbjct: 225 NGNGDDMRYLLSIVLAFNMSKREISSCKTAYLVPYFERKRRSRASSHASNSKLASTAVDA 284 Query: 916 XXXXXXXXXXXXXXXXXXXXTINERDMYQNNYFHASEAFFSILLDKDNSS-TILSLKKAG 1092 I ERD+Y NYFHASEAF S+LLDKDNSS TI SLKKAG Sbjct: 285 SKSTANGKSKSSSRKKQKSKNIKERDLYPKNYFHASEAFLSMLLDKDNSSSTIHSLKKAG 344 Query: 1093 PEITELLTQCSIGIAGTGLAVLLSVVCKIAIGGRTPFAATRLLHTGVGFGLFWLSHAVNG 1272 PEI+ELLT+CSIGIAGTGLAVLLSVVCK+A G ++P AATRL++TGVG GLFWLS AVNG Sbjct: 345 PEISELLTKCSIGIAGTGLAVLLSVVCKMATGMKSPIAATRLVNTGVGLGLFWLSWAVNG 404 Query: 1273 LRNTITTVFRGPVDAKLED-EVAVKIQRSMNDILFRAVTLLAITALRFA 1416 LR+TIT++FR P D L+D EVAV+IQ+SMNDILFRA+T+LAITA +FA Sbjct: 405 LRDTITSIFRSPGDMNLKDEEVAVRIQKSMNDILFRAITILAITAFKFA 453
>AK062363:Os06g0669200 | Length = 102 Score = 37.0 bits (84), Expect = 0.040 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%) Frame = -2 Query: 182 LPASCCCCWDLF--PWNGRTPWSSLDGARRT 96 LP C CCW PWNGR P ++ G+RR+ Sbjct: 12 LPGGCWCCWRGMWPPWNGRLPTAAAAGSRRS 42
>AK100757:Os04g0555000 | Length = 711 Score = 35.8 bits (81), Expect = 0.090 Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 16/107 (14%) Frame = +1 Query: 91 SPVLLAPSKELHGVLPFQGKRSQQQQQDAGRS-AAVQLSPQQHLLE-------------- 225 +P P LH +PFQ + S Q ++A +S AA + QQHLL+ Sbjct: 309 APAQCLPFPTLHSAVPFQLQPSMQHPRNAMKSTAAAAAAQQQHLLDELAAAAKATEVGNS 368 Query: 226 -GAYQAQQPLQMMVPGIGQXXXXXXXXXXXXXLIDAQDSHPDSVRLS 363 GA + L +P IG+ L+ D H + RL+ Sbjct: 369 IGAREILARLNQQLPPIGKPFLRSASYLKDALLLALADGHHAATRLT 415
>AK110509: | Length = 185 Score = 32.0 bits (71), Expect = 1.3 Identities = 12/19 (63%), Positives = 12/19 (63%) Frame = -2 Query: 215 CCCGESCTAALLPASCCCC 159 CCC C AA ASCCCC Sbjct: 82 CCC---CAAAAAAASCCCC 97
>AK107005:Os01g0193400 | Length = 373 Score = 30.8 bits (68), Expect = 2.9 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 3/22 (13%) Frame = -2 Query: 215 CCCGESCTA---ALLPASCCCC 159 CCCGE C A +SCCCC Sbjct: 332 CCCGECCGCCWFACSWSSCCCC 353
>AK099271:Os01g0193400 | Length = 373 Score = 30.8 bits (68), Expect = 2.9 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 3/22 (13%) Frame = -2 Query: 215 CCCGESCTA---ALLPASCCCC 159 CCCGE C A +SCCCC Sbjct: 332 CCCGECCGCCWFACSWSSCCCC 353
>AK069948:Os01g0193400 | Length = 373 Score = 30.8 bits (68), Expect = 2.9 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 3/22 (13%) Frame = -2 Query: 215 CCCGESCTA---ALLPASCCCC 159 CCCGE C A +SCCCC Sbjct: 332 CCCGECCGCCWFACSWSSCCCC 353
>AY187621:Os01g0332100 | Length = 628 Score = 30.8 bits (68), Expect = 2.9 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 4/46 (8%) Frame = +1 Query: 82 ATASPVLLA---PSKELHGV-LPFQGKRSQQQQQDAGRSAAVQLSP 207 ATA+P+ P LHG LPF + QQQQ +G++AA +P Sbjct: 38 ATATPLFPRCPHPHHHLHGRRLPFLASAASQQQQQSGQTAASPATP 83
>AK120720:Os01g0332100 | Length = 628 Score = 30.8 bits (68), Expect = 2.9 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 4/46 (8%) Frame = +1 Query: 82 ATASPVLLA---PSKELHGV-LPFQGKRSQQQQQDAGRSAAVQLSP 207 ATA+P+ P LHG LPF + QQQQ +G++AA +P Sbjct: 38 ATATPLFPRCPHPHHHLHGRRLPFLASAASQQQQQSGQTAASPATP 83
>AK105155:Os01g0267100 | Length = 172 Score = 30.0 bits (66), Expect = 4.9 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = -2 Query: 140 NGRTPWSSLDGARRTGEAVAEARRDRSPTIARGERI 33 + RTP SS GAR GE + R S + ARG ++ Sbjct: 18 HARTPASSSPGARTAGELLPHPRTPESSSPARGRQV 53
>AK108178:Os02g0679700 | Length = 281 Score = 30.0 bits (66), Expect = 5.0 Identities = 18/43 (41%), Positives = 26/43 (60%) Frame = +1 Query: 673 DPLLEFAQSQGALAIDENGRVIFTGSGEEMRDLLSVFLEFNVP 801 DPL +F QS + + ENG V +GE++R++L FL N P Sbjct: 180 DPLGDFRQSMLQMIV-ENGIV----AGEDLREMLRRFLTLNAP 217
>AK120219:Os12g0486800 | Length = 147 Score = 29.3 bits (64), Expect = 8.4 Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 9/48 (18%) Frame = -2 Query: 278 WPIPGTIICRGCCAW-*APSRRCC--------CGESCTAALLPASCCC 162 WP + C GCCA P RRC CG + A+C C Sbjct: 54 WPTSAPVTCAGCCASPPRPPRRCFRFSAIAAPCGPTAGPPPRAATCLC 101
>Os09g0306700:Os09g0306700 | Length = 842 Score = 29.3 bits (64), Expect = 8.4 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = +1 Query: 136 PFQGKRSQQQQQDAGRSAAVQLSPQQHLLEGAYQAQQPLQM 258 P Q ++ QQ QQ + Q+ QQ + + Q QQP Q+ Sbjct: 724 PLQQQQMQQMQQQQQQQQIQQMQQQQQMQQMQQQQQQPQQL 764 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 44,919,010 Number of extensions: 1065642 Number of successful extensions: 3223 Number of sequences better than 10.0: 14 Number of HSP's gapped: 3190 Number of HSP's successfully gapped: 14 Length of query: 542 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 437 Effective length of database: 11,195,550 Effective search space: 4892455350 Effective search space used: 4892455350 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
