ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf159f01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Y09602.1|HVCPMII H.vulgare gene encoding serine carboxypeptidase II, CP-MII Length = 6225 Score = 1320 bits (666), Expect = 0.0 Identities = 682/690 (98%) Strand = Plus / Plus Query: 922 agcaaggcaaacgtgaaggcaaaatctccatcaaagaagaaacagaaaggaaaaaccatc 981 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 agcaaggcaaacgtgaaggcaaaatctccatcaaagaagaaacagaaaggaaaaaccatc 393 Query: 982 aatgagcgtgacatgtatcagaataactatttccatgccagcgaagcnnnnnnnncaatc 1041 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 394 aatgagcgtgacatgtatcagaataactatttccatgccagcgaagcttttttttcaatc 453 Query: 1042 cttctggacaaggacaacagctcgacaattctctcgctgaagaaagcaggtcccgagatc 1101 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 cttctggacaaggacaacagctcgacaattctctcgctgaagaaagcaggtcccgagatc 513 Query: 1102 actgaactgttgacacaatgctctattggtattgctggaactggtctggctgttcttctg 1161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 actgaactgttgacacaatgctctattggtattgctggaactggtctggctgttcttctg 573 Query: 1162 tcggtcgtgtgcaagatcgccattggcgggaggactccttttgccgctactcggctgctg 1221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tcggtcgtgtgcaagatcgccattggcgggaggactccttttgccgctactcggctgctg 633 Query: 1222 cacacaggcgttgggtttgggctcttctggctctcccacgcggtaaatggactgcggaac 1281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 634 cacacaggcgttgggtttgggctcttctggctctcccacgcggtaaatggactgcggaac 693 Query: 1282 acaatcaccaccgtattcagaggcccggtcgacgcaaagttggaggatgaggttgctgtg 1341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 694 acaatcaccaccgtattcagaggcccggtcgacgcaaagttggaggatgaggttgctgtg 753 Query: 1342 aagatacaaagaagcatgaacgatattctcttcagggccgtaactctcctggcaatcact 1401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 aagatacaaagaagcatgaacgatattctcttcagggccgtaactctcctggcaatcact 813 Query: 1402 gctttgaggtttgcataagctgttcctacactgctgtaacttgacgcacctcgatgtatg 1461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 814 gctttgaggtttgcataagctgttcctacactgctgtaacttgacgcacctcgatgtatg 873 Query: 1462 attacccttttggttcaggagtgcggtttctgtaggactaaagtgccaaataccttcatg 1521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 874 attacccttttggttcaggagtgcggtttctgtaggactaaagtgccaaataccttcatg 933 Query: 1522 attcatgatggcctcatagaaaatgtgagacgttgtaaattgtacagaattttgctggca 1581 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 934 attcatgatggcctcatagaaaatgtgagacgttgtaaattgtacagaattttgctggca 993 Query: 1582 gctcggtgtatatggaagatagattttgcc 1611 |||||||||||||||||||||||||||||| Sbjct: 994 gctcggtgtatatggaagatagattttgcc 1023
>ref|NM_001061150.1| Oryza sativa (japonica cultivar-group) Os05g0143300 (Os05g0143300) mRNA, complete cds Length = 1754 Score = 174 bits (88), Expect = 6e-40 Identities = 307/382 (80%), Gaps = 3/382 (0%) Strand = Plus / Plus Query: 879 atccaattcaaaatcagcaagcaccgcagttgatgctccaaaaagcaaggcaaacgtgaa 938 |||||||||||||| ||||||||| |||||||||||| ||||||||| ||||| | ||| Sbjct: 960 atccaattcaaaattagcaagcacagcagttgatgcttcaaaaagcactgcaaatgggaa 1019 Query: 939 ggcaaaatctccatcaaagaagaaacagaaaggaaaaaccatcaatgagcgtgacatgta 998 | |||||||| |||||| |||||| ||||| | |||| || || || |||||| |||| Sbjct: 1020 gtcaaaatcttcatcaaggaagaagcagaagagtaaaaatattaaagaacgtgacctgta 1079 Query: 999 tcagaataactatttccatgccagcgaagcnnnnnnnncaatccttctggacaaggacaa 1058 | ||| |||||||||||||| || ||||| | || || |||||||||||||| Sbjct: 1080 cccgaagaactatttccatgctagtgaagcatttttatctatgctcctggacaaggacaa 1139 Query: 1059 ---cagctcgacaattctctcgctgaagaaagcaggtcccgagatcactgaactgttgac 1115 |||||| ||||||| || ||||| ||||| ||||| ||||||| ||||||| |||| Sbjct: 1140 tagcagctcaacaattcattcactgaaaaaagctggtcctgagatcagtgaactgctgac 1199 Query: 1116 acaatgctctattggtattgctggaactggtctggctgttcttctgtcggtcgtgtgcaa 1175 | ||||||||||||| || ||||||||||| ||||||||||||| || || |||||||| Sbjct: 1200 aaaatgctctattggcatcgctggaactggcttggctgttcttctctcagttgtgtgcaa 1259 Query: 1176 gatcgccattggcgggaggactccttttgccgctactcggctgctgcacacaggcgttgg 1235 ||| || | || || || |||| |||| ||||| |||||| || |||| || ||||| Sbjct: 1260 gatggctaccggtatgaagagtcctattgctgctacgcggctggtgaacactggtgttgg 1319 Query: 1236 gtttgggctcttctggctctcc 1257 |||||||||| ||||||||| Sbjct: 1320 acttgggctcttttggctctcc 1341 Score = 149 bits (75), Expect = 4e-32 Identities = 141/163 (86%) Strand = Plus / Plus Query: 313 gccgcgctcatcgacgcgcaagattcccaccctgattcggttcgacttagccttgggatt 372 |||||||||||||||| ||||| || |||||||| || |||| |||||||||||||||| Sbjct: 409 gccgcgctcatcgacgtccaagactctcaccctgactcagttcaacttagccttgggatt 468 Query: 373 gctgagcagtgtgcaaggcaagagaaaatcctaaagtttctaatgtcagggtccgatgtc 432 || ||||| || ||||||| ||||||||||| || ||||||| ||||||||||||||| Sbjct: 469 gccgagcaatgctcaaggcaggagaaaatcctgaaatttctaaggtcagggtccgatgtg 528 Query: 433 aaagaacttgacgcctctttgcttactgaacttacgggacatc 475 ||||||||||| | ||||| || |||||||||||||| |||| Sbjct: 529 aaagaacttgatgtatctttactgactgaacttacggggcatc 571 Score = 97.6 bits (49), Expect = 1e-16 Identities = 85/97 (87%) Strand = Plus / Plus Query: 590 tccctgatgacaagttatctatctacgagtttggatcggaggagcccctgcagtatctat 649 ||||||| || |||||||||||||| ||||||| || ||| ||||||| |||||||||| Sbjct: 662 tccctgacgataagttatctatctatgagtttgaattggatgagccccagcagtatctac 721 Query: 650 cagaaaaccaacttatcatccctgatccacttttgga 686 ||||||| |||||| ||||||||||||| ||| |||| Sbjct: 722 cagaaaatcaacttgtcatccctgatcctcttgtgga 758 Score = 87.7 bits (44), Expect = 1e-13 Identities = 83/96 (86%) Strand = Plus / Plus Query: 502 caaccatatactcctgatgacaagttatctgtatatgagtttggattggaggagcctctg 561 |||||||||| ||||| || ||||||||| | |||||||||| |||||| ||||| | | Sbjct: 652 caaccatatatccctgacgataagttatctatctatgagtttgaattggatgagccccag 711 Query: 562 cagtatctagcagaaaatcaacttatcctccctgat 597 ||||||||| |||||||||||||| || |||||||| Sbjct: 712 cagtatctaccagaaaatcaacttgtcatccctgat 747 Score = 69.9 bits (35), Expect = 3e-08 Identities = 75/87 (86%), Gaps = 6/87 (6%) Strand = Plus / Plus Query: 51 gatggtgggcgacctgtcc---ctcctcgcctccgccacc---gcctcccccgtcctcct 104 ||||||||||||||| ||| ||||||||| ||||| || |||||||||||| |||| Sbjct: 144 gatggtgggcgacctctcctccctcctcgccgccgcctcctccgcctcccccgtcgtcct 203 Query: 105 agcgccatccaaggagctccatggcgt 131 |||||||| ||||||||||||||||| Sbjct: 204 cgcgccatcaaaggagctccatggcgt 230 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1552 cgttgtaaattgtacagaattttgctggcagctcggtgtatatggaagat 1601 |||||| || ||||||||||||||||||||||| |||||||||| ||||| Sbjct: 1654 cgttgtgaactgtacagaattttgctggcagcttggtgtatatgaaagat 1703 Score = 48.1 bits (24), Expect = 0.10 Identities = 63/76 (82%) Strand = Plus / Plus Query: 1345 atacaaagaagcatgaacgatattctcttcagggccgtaactctcctggcaatcactgct 1404 ||||||| ||||||||||| ||||||||||| || | ||| | |||||||||||||| Sbjct: 1432 atacaaaagagcatgaacgacattctcttcagagctatcactatattggcaatcactgct 1491 Query: 1405 ttgaggtttgcataag 1420 || | |||||| |||| Sbjct: 1492 tttaagtttgcgtaag 1507
>dbj|AK099030.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126M11, full insert sequence Length = 1756 Score = 174 bits (88), Expect = 6e-40 Identities = 307/382 (80%), Gaps = 3/382 (0%) Strand = Plus / Plus Query: 879 atccaattcaaaatcagcaagcaccgcagttgatgctccaaaaagcaaggcaaacgtgaa 938 |||||||||||||| ||||||||| |||||||||||| ||||||||| ||||| | ||| Sbjct: 962 atccaattcaaaattagcaagcacagcagttgatgcttcaaaaagcactgcaaatgggaa 1021 Query: 939 ggcaaaatctccatcaaagaagaaacagaaaggaaaaaccatcaatgagcgtgacatgta 998 | |||||||| |||||| |||||| ||||| | |||| || || || |||||| |||| Sbjct: 1022 gtcaaaatcttcatcaaggaagaagcagaagagtaaaaatattaaagaacgtgacctgta 1081 Query: 999 tcagaataactatttccatgccagcgaagcnnnnnnnncaatccttctggacaaggacaa 1058 | ||| |||||||||||||| || ||||| | || || |||||||||||||| Sbjct: 1082 cccgaagaactatttccatgctagtgaagcatttttatctatgctcctggacaaggacaa 1141 Query: 1059 ---cagctcgacaattctctcgctgaagaaagcaggtcccgagatcactgaactgttgac 1115 |||||| ||||||| || ||||| ||||| ||||| ||||||| ||||||| |||| Sbjct: 1142 tagcagctcaacaattcattcactgaaaaaagctggtcctgagatcagtgaactgctgac 1201 Query: 1116 acaatgctctattggtattgctggaactggtctggctgttcttctgtcggtcgtgtgcaa 1175 | ||||||||||||| || ||||||||||| ||||||||||||| || || |||||||| Sbjct: 1202 aaaatgctctattggcatcgctggaactggcttggctgttcttctctcagttgtgtgcaa 1261 Query: 1176 gatcgccattggcgggaggactccttttgccgctactcggctgctgcacacaggcgttgg 1235 ||| || | || || || |||| |||| ||||| |||||| || |||| || ||||| Sbjct: 1262 gatggctaccggtatgaagagtcctattgctgctacgcggctggtgaacactggtgttgg 1321 Query: 1236 gtttgggctcttctggctctcc 1257 |||||||||| ||||||||| Sbjct: 1322 acttgggctcttttggctctcc 1343 Score = 149 bits (75), Expect = 4e-32 Identities = 141/163 (86%) Strand = Plus / Plus Query: 313 gccgcgctcatcgacgcgcaagattcccaccctgattcggttcgacttagccttgggatt 372 |||||||||||||||| ||||| || |||||||| || |||| |||||||||||||||| Sbjct: 411 gccgcgctcatcgacgtccaagactctcaccctgactcagttcaacttagccttgggatt 470 Query: 373 gctgagcagtgtgcaaggcaagagaaaatcctaaagtttctaatgtcagggtccgatgtc 432 || ||||| || ||||||| ||||||||||| || ||||||| ||||||||||||||| Sbjct: 471 gccgagcaatgctcaaggcaggagaaaatcctgaaatttctaaggtcagggtccgatgtg 530 Query: 433 aaagaacttgacgcctctttgcttactgaacttacgggacatc 475 ||||||||||| | ||||| || |||||||||||||| |||| Sbjct: 531 aaagaacttgatgtatctttactgactgaacttacggggcatc 573 Score = 97.6 bits (49), Expect = 1e-16 Identities = 85/97 (87%) Strand = Plus / Plus Query: 590 tccctgatgacaagttatctatctacgagtttggatcggaggagcccctgcagtatctat 649 ||||||| || |||||||||||||| ||||||| || ||| ||||||| |||||||||| Sbjct: 664 tccctgacgataagttatctatctatgagtttgaattggatgagccccagcagtatctac 723 Query: 650 cagaaaaccaacttatcatccctgatccacttttgga 686 ||||||| |||||| ||||||||||||| ||| |||| Sbjct: 724 cagaaaatcaacttgtcatccctgatcctcttgtgga 760 Score = 87.7 bits (44), Expect = 1e-13 Identities = 83/96 (86%) Strand = Plus / Plus Query: 502 caaccatatactcctgatgacaagttatctgtatatgagtttggattggaggagcctctg 561 |||||||||| ||||| || ||||||||| | |||||||||| |||||| ||||| | | Sbjct: 654 caaccatatatccctgacgataagttatctatctatgagtttgaattggatgagccccag 713 Query: 562 cagtatctagcagaaaatcaacttatcctccctgat 597 ||||||||| |||||||||||||| || |||||||| Sbjct: 714 cagtatctaccagaaaatcaacttgtcatccctgat 749 Score = 69.9 bits (35), Expect = 3e-08 Identities = 75/87 (86%), Gaps = 6/87 (6%) Strand = Plus / Plus Query: 51 gatggtgggcgacctgtcc---ctcctcgcctccgccacc---gcctcccccgtcctcct 104 ||||||||||||||| ||| ||||||||| ||||| || |||||||||||| |||| Sbjct: 146 gatggtgggcgacctctcctccctcctcgccgccgcctcctccgcctcccccgtcgtcct 205 Query: 105 agcgccatccaaggagctccatggcgt 131 |||||||| ||||||||||||||||| Sbjct: 206 cgcgccatcaaaggagctccatggcgt 232 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1552 cgttgtaaattgtacagaattttgctggcagctcggtgtatatggaagat 1601 |||||| || ||||||||||||||||||||||| |||||||||| ||||| Sbjct: 1656 cgttgtgaactgtacagaattttgctggcagcttggtgtatatgaaagat 1705 Score = 44.1 bits (22), Expect = 1.6 Identities = 52/62 (83%) Strand = Plus / Plus Query: 1354 agcatgaacgatattctcttcagggccgtaactctcctggcaatcactgctttgaggttt 1413 ||||||||||| ||||||||||| || | ||| | |||||||||||||||| | |||| Sbjct: 1443 agcatgaacgacattctcttcagagctatcactatattggcaatcactgcttttaagttt 1502 Query: 1414 gc 1415 || Sbjct: 1503 gc 1504
>dbj|AK072841.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143G06, full insert sequence Length = 1728 Score = 174 bits (88), Expect = 6e-40 Identities = 307/382 (80%), Gaps = 3/382 (0%) Strand = Plus / Plus Query: 879 atccaattcaaaatcagcaagcaccgcagttgatgctccaaaaagcaaggcaaacgtgaa 938 |||||||||||||| ||||||||| |||||||||||| ||||||||| ||||| | ||| Sbjct: 966 atccaattcaaaattagcaagcacagcagttgatgcttcaaaaagcactgcaaatgggaa 1025 Query: 939 ggcaaaatctccatcaaagaagaaacagaaaggaaaaaccatcaatgagcgtgacatgta 998 | |||||||| |||||| |||||| ||||| | |||| || || || |||||| |||| Sbjct: 1026 gtcaaaatcttcatcaaggaagaagcagaagagtaaaaatattaaagaacgtgacctgta 1085 Query: 999 tcagaataactatttccatgccagcgaagcnnnnnnnncaatccttctggacaaggacaa 1058 | ||| |||||||||||||| || ||||| | || || |||||||||||||| Sbjct: 1086 cccgaagaactatttccatgctagtgaagcatttttatctatgctcctggacaaggacaa 1145 Query: 1059 ---cagctcgacaattctctcgctgaagaaagcaggtcccgagatcactgaactgttgac 1115 |||||| ||||||| || ||||| ||||| ||||| ||||||| ||||||| |||| Sbjct: 1146 tagcagctcaacaattcattcactgaaaaaagctggtcctgagatcagtgaactgctgac 1205 Query: 1116 acaatgctctattggtattgctggaactggtctggctgttcttctgtcggtcgtgtgcaa 1175 | ||||||||||||| || ||||||||||| ||||||||||||| || || |||||||| Sbjct: 1206 aaaatgctctattggcatcgctggaactggcttggctgttcttctctcagttgtgtgcaa 1265 Query: 1176 gatcgccattggcgggaggactccttttgccgctactcggctgctgcacacaggcgttgg 1235 ||| || | || || || |||| |||| ||||| |||||| || |||| || ||||| Sbjct: 1266 gatggctaccggtatgaagagtcctattgctgctacgcggctggtgaacactggtgttgg 1325 Query: 1236 gtttgggctcttctggctctcc 1257 |||||||||| ||||||||| Sbjct: 1326 acttgggctcttttggctctcc 1347 Score = 149 bits (75), Expect = 4e-32 Identities = 141/163 (86%) Strand = Plus / Plus Query: 313 gccgcgctcatcgacgcgcaagattcccaccctgattcggttcgacttagccttgggatt 372 |||||||||||||||| ||||| || |||||||| || |||| |||||||||||||||| Sbjct: 415 gccgcgctcatcgacgtccaagactctcaccctgactcagttcaacttagccttgggatt 474 Query: 373 gctgagcagtgtgcaaggcaagagaaaatcctaaagtttctaatgtcagggtccgatgtc 432 || ||||| || ||||||| ||||||||||| || ||||||| ||||||||||||||| Sbjct: 475 gccgagcaatgctcaaggcaggagaaaatcctgaaatttctaaggtcagggtccgatgtg 534 Query: 433 aaagaacttgacgcctctttgcttactgaacttacgggacatc 475 ||||||||||| | ||||| || |||||||||||||| |||| Sbjct: 535 aaagaacttgatgtatctttactgactgaacttacggggcatc 577 Score = 97.6 bits (49), Expect = 1e-16 Identities = 85/97 (87%) Strand = Plus / Plus Query: 590 tccctgatgacaagttatctatctacgagtttggatcggaggagcccctgcagtatctat 649 ||||||| || |||||||||||||| ||||||| || ||| ||||||| |||||||||| Sbjct: 668 tccctgacgataagttatctatctatgagtttgaattggatgagccccagcagtatctac 727 Query: 650 cagaaaaccaacttatcatccctgatccacttttgga 686 ||||||| |||||| ||||||||||||| ||| |||| Sbjct: 728 cagaaaatcaacttgtcatccctgatcctcttgtgga 764 Score = 87.7 bits (44), Expect = 1e-13 Identities = 83/96 (86%) Strand = Plus / Plus Query: 502 caaccatatactcctgatgacaagttatctgtatatgagtttggattggaggagcctctg 561 |||||||||| ||||| || ||||||||| | |||||||||| |||||| ||||| | | Sbjct: 658 caaccatatatccctgacgataagttatctatctatgagtttgaattggatgagccccag 717 Query: 562 cagtatctagcagaaaatcaacttatcctccctgat 597 ||||||||| |||||||||||||| || |||||||| Sbjct: 718 cagtatctaccagaaaatcaacttgtcatccctgat 753 Score = 69.9 bits (35), Expect = 3e-08 Identities = 75/87 (86%), Gaps = 6/87 (6%) Strand = Plus / Plus Query: 51 gatggtgggcgacctgtcc---ctcctcgcctccgccacc---gcctcccccgtcctcct 104 ||||||||||||||| ||| ||||||||| ||||| || |||||||||||| |||| Sbjct: 150 gatggtgggcgacctctcctccctcctcgccgccgcctcctccgcctcccccgtcgtcct 209 Query: 105 agcgccatccaaggagctccatggcgt 131 |||||||| ||||||||||||||||| Sbjct: 210 cgcgccatcaaaggagctccatggcgt 236 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1552 cgttgtaaattgtacagaattttgctggcagctcggtgtatatggaagat 1601 |||||| || ||||||||||||||||||||||| |||||||||| ||||| Sbjct: 1660 cgttgtgaactgtacagaattttgctggcagcttggtgtatatgaaagat 1709 Score = 54.0 bits (27), Expect = 0.002 Identities = 75/91 (82%) Strand = Plus / Plus Query: 1330 gaggttgctgtgaagatacaaagaagcatgaacgatattctcttcagggccgtaactctc 1389 |||||||| || | |||||||| ||||||||||| ||||||||||| || | ||| | Sbjct: 1423 gaggttgcagtcaggatacaaaagagcatgaacgacattctcttcagagctatcactata 1482 Query: 1390 ctggcaatcactgctttgaggtttgcataag 1420 |||||||||||||||| | |||||| |||| Sbjct: 1483 ttggcaatcactgcttttaagtttgcgtaag 1513
>gb|AY104709.1| Zea mays PCO125596 mRNA sequence Length = 691 Score = 135 bits (68), Expect = 6e-28 Identities = 110/124 (88%) Strand = Plus / Plus Query: 313 gccgcgctcatcgacgcgcaagattcccaccctgattcggttcgacttagccttgggatt 372 |||| ||||||||||| ||||||||| |||||||| ||||||| |||||||||||||||| Sbjct: 493 gccgtgctcatcgacgtgcaagattctcaccctgactcggttcaacttagccttgggatt 552 Query: 373 gctgagcagtgtgcaaggcaagagaaaatcctaaagtttctaatgtcagggtccgatgtc 432 || ||||| |||||||||||||||||| |||| |||||||| ||||||| || ||||| Sbjct: 553 gcggagcaatgtgcaaggcaagagaaactcctcaagtttctggtgtcaggatctgatgtt 612 Query: 433 aaag 436 |||| Sbjct: 613 aaag 616 Score = 101 bits (51), Expect = 8e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 50 cgatggtgggcgacctgtccctcctcgcctccgccaccgcctcccccgtcctcctagcgc 109 |||||||||| |||||||||||||||||| |||| |||||||||||||| |||| ||| Sbjct: 221 cgatggtgggggacctgtccctcctcgccgtcgcctccgcctcccccgtcgtcctcccgc 280 Query: 110 catccaaggagctccatggcgtcctgccgttccaggggaagag 152 | |||||||||||||||||||| || || ||||||| ||||| Sbjct: 281 cttccaaggagctccatggcgtgcttcctctccagggtaagag 323
>gb|AC104283.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1607_F09, complete sequence Length = 95755 Score = 127 bits (64), Expect = 1e-25 Identities = 118/136 (86%) Strand = Plus / Minus Query: 340 caccctgattcggttcgacttagccttgggattgctgagcagtgtgcaaggcaagagaaa 399 |||||||| || |||| |||||||||||||||||| ||||| || ||||||| |||||| Sbjct: 8840 caccctgactcagttcaacttagccttgggattgccgagcaatgctcaaggcaggagaaa 8781 Query: 400 atcctaaagtttctaatgtcagggtccgatgtcaaagaacttgacgcctctttgcttact 459 ||||| || ||||||| ||||||||||||||| ||||||||||| | ||||| || ||| Sbjct: 8780 atcctgaaatttctaaggtcagggtccgatgtgaaagaacttgatgtatctttactgact 8721 Query: 460 gaacttacgggacatc 475 ||||||||||| |||| Sbjct: 8720 gaacttacggggcatc 8705 Score = 117 bits (59), Expect = 1e-22 Identities = 257/325 (79%), Gaps = 3/325 (0%) Strand = Plus / Minus Query: 936 gaaggcaaaatctccatcaaagaagaaacagaaaggaaaaaccatcaatgagcgtgacat 995 |||| |||||||| |||||| |||||| ||||| | |||| || || || |||||| | Sbjct: 7257 gaagtcaaaatcttcatcaaggaagaagcagaagagtaaaaatattaaagaacgtgacct 7198 Query: 996 gtatcagaataactatttccatgccagcgaagcnnnnnnnncaatccttctggacaagga 1055 ||| | ||| |||||||||||||| || ||||| | || || ||||||||||| Sbjct: 7197 gtacccgaagaactatttccatgctagtgaagcatttttatctatgctcctggacaagga 7138 Query: 1056 caa---cagctcgacaattctctcgctgaagaaagcaggtcccgagatcactgaactgtt 1112 ||| |||||| ||||||| || ||||| ||||| ||||| ||||||| ||||||| | Sbjct: 7137 caatagcagctcaacaattcattcactgaaaaaagctggtcctgagatcagtgaactgct 7078 Query: 1113 gacacaatgctctattggtattgctggaactggtctggctgttcttctgtcggtcgtgtg 1172 |||| ||||||||||||| || ||||||||||| ||||||||||||| || || ||||| Sbjct: 7077 gacaaaatgctctattggcatcgctggaactggcttggctgttcttctctcagttgtgtg 7018 Query: 1173 caagatcgccattggcgggaggactccttttgccgctactcggctgctgcacacaggcgt 1232 |||||| || | || || || |||| |||| ||||| |||||| || |||| || || Sbjct: 7017 caagatggctaccggtatgaagagtcctattgctgctacgcggctggtgaacactggtgt 6958 Query: 1233 tgggtttgggctcttctggctctcc 1257 ||| |||||||||| ||||||||| Sbjct: 6957 tggacttgggctcttttggctctcc 6933 Score = 97.6 bits (49), Expect = 1e-16 Identities = 85/97 (87%) Strand = Plus / Minus Query: 590 tccctgatgacaagttatctatctacgagtttggatcggaggagcccctgcagtatctat 649 ||||||| || |||||||||||||| ||||||| || ||| ||||||| |||||||||| Sbjct: 8614 tccctgacgataagttatctatctatgagtttgaattggatgagccccagcagtatctac 8555 Query: 650 cagaaaaccaacttatcatccctgatccacttttgga 686 ||||||| |||||| ||||||||||||| ||| |||| Sbjct: 8554 cagaaaatcaacttgtcatccctgatcctcttgtgga 8518 Score = 87.7 bits (44), Expect = 1e-13 Identities = 83/96 (86%) Strand = Plus / Minus Query: 502 caaccatatactcctgatgacaagttatctgtatatgagtttggattggaggagcctctg 561 |||||||||| ||||| || ||||||||| | |||||||||| |||||| ||||| | | Sbjct: 8624 caaccatatatccctgacgataagttatctatctatgagtttgaattggatgagccccag 8565 Query: 562 cagtatctagcagaaaatcaacttatcctccctgat 597 ||||||||| |||||||||||||| || |||||||| Sbjct: 8564 cagtatctaccagaaaatcaacttgtcatccctgat 8529 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Minus Query: 1552 cgttgtaaattgtacagaattttgctggcagctcggtgtatatggaagat 1601 |||||| || ||||||||||||||||||||||| |||||||||| ||||| Sbjct: 6620 cgttgtgaactgtacagaattttgctggcagcttggtgtatatgaaagat 6571 Score = 65.9 bits (33), Expect = 4e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 879 atccaattcaaaatcagcaagcaccgcagttgatgctccaaaaag 923 |||||||||||||| ||||||||| |||||||||||| ||||||| Sbjct: 7684 atccaattcaaaattagcaagcacagcagttgatgcttcaaaaag 7640 Score = 48.1 bits (24), Expect = 0.10 Identities = 63/76 (82%) Strand = Plus / Minus Query: 1345 atacaaagaagcatgaacgatattctcttcagggccgtaactctcctggcaatcactgct 1404 ||||||| ||||||||||| ||||||||||| || | ||| | |||||||||||||| Sbjct: 6842 atacaaaagagcatgaacgacattctcttcagagctatcactatattggcaatcactgct 6783 Query: 1405 ttgaggtttgcataag 1420 || | |||||| |||| Sbjct: 6782 tttaagtttgcgtaag 6767 Score = 44.1 bits (22), Expect = 1.6 Identities = 62/74 (83%), Gaps = 6/74 (8%) Strand = Plus / Minus Query: 51 gatggtgggcgacctgtcc---ctcctcgcctccgccacc---gcctcccccgtcctcct 104 ||||||||||||||| ||| ||||||||| ||||| || |||||||||||| |||| Sbjct: 9748 gatggtgggcgacctctcctccctcctcgccgccgcctcctccgcctcccccgtcgtcct 9689 Query: 105 agcgccatccaagg 118 |||||||| |||| Sbjct: 9688 cgcgccatcaaagg 9675 Score = 42.1 bits (21), Expect = 6.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 134 tgccgttccaggggaagaggtcccagcagcagcagcaggacgctg 178 ||||| |||||||||||||| | | || ||||| ||||||||||| Sbjct: 9576 tgccgctccaggggaagaggccgccgctgcagccgcaggacgctg 9532
>gb|AC104277.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1264_A04, complete sequence Length = 133271 Score = 127 bits (64), Expect = 1e-25 Identities = 118/136 (86%) Strand = Plus / Minus Query: 340 caccctgattcggttcgacttagccttgggattgctgagcagtgtgcaaggcaagagaaa 399 |||||||| || |||| |||||||||||||||||| ||||| || ||||||| |||||| Sbjct: 117418 caccctgactcagttcaacttagccttgggattgccgagcaatgctcaaggcaggagaaa 117359 Query: 400 atcctaaagtttctaatgtcagggtccgatgtcaaagaacttgacgcctctttgcttact 459 ||||| || ||||||| ||||||||||||||| ||||||||||| | ||||| || ||| Sbjct: 117358 atcctgaaatttctaaggtcagggtccgatgtgaaagaacttgatgtatctttactgact 117299 Query: 460 gaacttacgggacatc 475 ||||||||||| |||| Sbjct: 117298 gaacttacggggcatc 117283 Score = 117 bits (59), Expect = 1e-22 Identities = 257/325 (79%), Gaps = 3/325 (0%) Strand = Plus / Minus Query: 936 gaaggcaaaatctccatcaaagaagaaacagaaaggaaaaaccatcaatgagcgtgacat 995 |||| |||||||| |||||| |||||| ||||| | |||| || || || |||||| | Sbjct: 115835 gaagtcaaaatcttcatcaaggaagaagcagaagagtaaaaatattaaagaacgtgacct 115776 Query: 996 gtatcagaataactatttccatgccagcgaagcnnnnnnnncaatccttctggacaagga 1055 ||| | ||| |||||||||||||| || ||||| | || || ||||||||||| Sbjct: 115775 gtacccgaagaactatttccatgctagtgaagcatttttatctatgctcctggacaagga 115716 Query: 1056 caa---cagctcgacaattctctcgctgaagaaagcaggtcccgagatcactgaactgtt 1112 ||| |||||| ||||||| || ||||| ||||| ||||| ||||||| ||||||| | Sbjct: 115715 caatagcagctcaacaattcattcactgaaaaaagctggtcctgagatcagtgaactgct 115656 Query: 1113 gacacaatgctctattggtattgctggaactggtctggctgttcttctgtcggtcgtgtg 1172 |||| ||||||||||||| || ||||||||||| ||||||||||||| || || ||||| Sbjct: 115655 gacaaaatgctctattggcatcgctggaactggcttggctgttcttctctcagttgtgtg 115596 Query: 1173 caagatcgccattggcgggaggactccttttgccgctactcggctgctgcacacaggcgt 1232 |||||| || | || || || |||| |||| ||||| |||||| || |||| || || Sbjct: 115595 caagatggctaccggtatgaagagtcctattgctgctacgcggctggtgaacactggtgt 115536 Query: 1233 tgggtttgggctcttctggctctcc 1257 ||| |||||||||| ||||||||| Sbjct: 115535 tggacttgggctcttttggctctcc 115511 Score = 97.6 bits (49), Expect = 1e-16 Identities = 85/97 (87%) Strand = Plus / Minus Query: 590 tccctgatgacaagttatctatctacgagtttggatcggaggagcccctgcagtatctat 649 ||||||| || |||||||||||||| ||||||| || ||| ||||||| |||||||||| Sbjct: 117192 tccctgacgataagttatctatctatgagtttgaattggatgagccccagcagtatctac 117133 Query: 650 cagaaaaccaacttatcatccctgatccacttttgga 686 ||||||| |||||| ||||||||||||| ||| |||| Sbjct: 117132 cagaaaatcaacttgtcatccctgatcctcttgtgga 117096 Score = 87.7 bits (44), Expect = 1e-13 Identities = 83/96 (86%) Strand = Plus / Minus Query: 502 caaccatatactcctgatgacaagttatctgtatatgagtttggattggaggagcctctg 561 |||||||||| ||||| || ||||||||| | |||||||||| |||||| ||||| | | Sbjct: 117202 caaccatatatccctgacgataagttatctatctatgagtttgaattggatgagccccag 117143 Query: 562 cagtatctagcagaaaatcaacttatcctccctgat 597 ||||||||| |||||||||||||| || |||||||| Sbjct: 117142 cagtatctaccagaaaatcaacttgtcatccctgat 117107 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Minus Query: 1552 cgttgtaaattgtacagaattttgctggcagctcggtgtatatggaagat 1601 |||||| || ||||||||||||||||||||||| |||||||||| ||||| Sbjct: 115198 cgttgtgaactgtacagaattttgctggcagcttggtgtatatgaaagat 115149 Score = 65.9 bits (33), Expect = 4e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 879 atccaattcaaaatcagcaagcaccgcagttgatgctccaaaaag 923 |||||||||||||| ||||||||| |||||||||||| ||||||| Sbjct: 116262 atccaattcaaaattagcaagcacagcagttgatgcttcaaaaag 116218 Score = 48.1 bits (24), Expect = 0.10 Identities = 63/76 (82%) Strand = Plus / Minus Query: 1345 atacaaagaagcatgaacgatattctcttcagggccgtaactctcctggcaatcactgct 1404 ||||||| ||||||||||| ||||||||||| || | ||| | |||||||||||||| Sbjct: 115420 atacaaaagagcatgaacgacattctcttcagagctatcactatattggcaatcactgct 115361 Query: 1405 ttgaggtttgcataag 1420 || | |||||| |||| Sbjct: 115360 tttaagtttgcgtaag 115345 Score = 44.1 bits (22), Expect = 1.6 Identities = 62/74 (83%), Gaps = 6/74 (8%) Strand = Plus / Minus Query: 51 gatggtgggcgacctgtcc---ctcctcgcctccgccacc---gcctcccccgtcctcct 104 ||||||||||||||| ||| ||||||||| ||||| || |||||||||||| |||| Sbjct: 118326 gatggtgggcgacctctcctccctcctcgccgccgcctcctccgcctcccccgtcgtcct 118267 Query: 105 agcgccatccaagg 118 |||||||| |||| Sbjct: 118266 cgcgccatcaaagg 118253 Score = 42.1 bits (21), Expect = 6.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 134 tgccgttccaggggaagaggtcccagcagcagcagcaggacgctg 178 ||||| |||||||||||||| | | || ||||| ||||||||||| Sbjct: 118154 tgccgctccaggggaagaggccgccgctgcagccgcaggacgctg 118110
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 127 bits (64), Expect = 1e-25 Identities = 118/136 (86%) Strand = Plus / Minus Query: 340 caccctgattcggttcgacttagccttgggattgctgagcagtgtgcaaggcaagagaaa 399 |||||||| || |||| |||||||||||||||||| ||||| || ||||||| |||||| Sbjct: 2441818 caccctgactcagttcaacttagccttgggattgccgagcaatgctcaaggcaggagaaa 2441759 Query: 400 atcctaaagtttctaatgtcagggtccgatgtcaaagaacttgacgcctctttgcttact 459 ||||| || ||||||| ||||||||||||||| ||||||||||| | ||||| || ||| Sbjct: 2441758 atcctgaaatttctaaggtcagggtccgatgtgaaagaacttgatgtatctttactgact 2441699 Query: 460 gaacttacgggacatc 475 ||||||||||| |||| Sbjct: 2441698 gaacttacggggcatc 2441683 Score = 117 bits (59), Expect = 1e-22 Identities = 257/325 (79%), Gaps = 3/325 (0%) Strand = Plus / Minus Query: 936 gaaggcaaaatctccatcaaagaagaaacagaaaggaaaaaccatcaatgagcgtgacat 995 |||| |||||||| |||||| |||||| ||||| | |||| || || || |||||| | Sbjct: 2440235 gaagtcaaaatcttcatcaaggaagaagcagaagagtaaaaatattaaagaacgtgacct 2440176 Query: 996 gtatcagaataactatttccatgccagcgaagcnnnnnnnncaatccttctggacaagga 1055 ||| | ||| |||||||||||||| || ||||| | || || ||||||||||| Sbjct: 2440175 gtacccgaagaactatttccatgctagtgaagcatttttatctatgctcctggacaagga 2440116 Query: 1056 caa---cagctcgacaattctctcgctgaagaaagcaggtcccgagatcactgaactgtt 1112 ||| |||||| ||||||| || ||||| ||||| ||||| ||||||| ||||||| | Sbjct: 2440115 caatagcagctcaacaattcattcactgaaaaaagctggtcctgagatcagtgaactgct 2440056 Query: 1113 gacacaatgctctattggtattgctggaactggtctggctgttcttctgtcggtcgtgtg 1172 |||| ||||||||||||| || ||||||||||| ||||||||||||| || || ||||| Sbjct: 2440055 gacaaaatgctctattggcatcgctggaactggcttggctgttcttctctcagttgtgtg 2439996 Query: 1173 caagatcgccattggcgggaggactccttttgccgctactcggctgctgcacacaggcgt 1232 |||||| || | || || || |||| |||| ||||| |||||| || |||| || || Sbjct: 2439995 caagatggctaccggtatgaagagtcctattgctgctacgcggctggtgaacactggtgt 2439936 Query: 1233 tgggtttgggctcttctggctctcc 1257 ||| |||||||||| ||||||||| Sbjct: 2439935 tggacttgggctcttttggctctcc 2439911 Score = 97.6 bits (49), Expect = 1e-16 Identities = 85/97 (87%) Strand = Plus / Minus Query: 590 tccctgatgacaagttatctatctacgagtttggatcggaggagcccctgcagtatctat 649 ||||||| || |||||||||||||| ||||||| || ||| ||||||| |||||||||| Sbjct: 2441592 tccctgacgataagttatctatctatgagtttgaattggatgagccccagcagtatctac 2441533 Query: 650 cagaaaaccaacttatcatccctgatccacttttgga 686 ||||||| |||||| ||||||||||||| ||| |||| Sbjct: 2441532 cagaaaatcaacttgtcatccctgatcctcttgtgga 2441496 Score = 87.7 bits (44), Expect = 1e-13 Identities = 83/96 (86%) Strand = Plus / Minus Query: 502 caaccatatactcctgatgacaagttatctgtatatgagtttggattggaggagcctctg 561 |||||||||| ||||| || ||||||||| | |||||||||| |||||| ||||| | | Sbjct: 2441602 caaccatatatccctgacgataagttatctatctatgagtttgaattggatgagccccag 2441543 Query: 562 cagtatctagcagaaaatcaacttatcctccctgat 597 ||||||||| |||||||||||||| || |||||||| Sbjct: 2441542 cagtatctaccagaaaatcaacttgtcatccctgat 2441507 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Minus Query: 1552 cgttgtaaattgtacagaattttgctggcagctcggtgtatatggaagat 1601 |||||| || ||||||||||||||||||||||| |||||||||| ||||| Sbjct: 2439598 cgttgtgaactgtacagaattttgctggcagcttggtgtatatgaaagat 2439549 Score = 65.9 bits (33), Expect = 4e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 879 atccaattcaaaatcagcaagcaccgcagttgatgctccaaaaag 923 |||||||||||||| ||||||||| |||||||||||| ||||||| Sbjct: 2440662 atccaattcaaaattagcaagcacagcagttgatgcttcaaaaag 2440618 Score = 48.1 bits (24), Expect = 0.10 Identities = 63/76 (82%) Strand = Plus / Minus Query: 1345 atacaaagaagcatgaacgatattctcttcagggccgtaactctcctggcaatcactgct 1404 ||||||| ||||||||||| ||||||||||| || | ||| | |||||||||||||| Sbjct: 2439820 atacaaaagagcatgaacgacattctcttcagagctatcactatattggcaatcactgct 2439761 Query: 1405 ttgaggtttgcataag 1420 || | |||||| |||| Sbjct: 2439760 tttaagtttgcgtaag 2439745 Score = 44.1 bits (22), Expect = 1.6 Identities = 62/74 (83%), Gaps = 6/74 (8%) Strand = Plus / Minus Query: 51 gatggtgggcgacctgtcc---ctcctcgcctccgccacc---gcctcccccgtcctcct 104 ||||||||||||||| ||| ||||||||| ||||| || |||||||||||| |||| Sbjct: 2442726 gatggtgggcgacctctcctccctcctcgccgccgcctcctccgcctcccccgtcgtcct 2442667 Query: 105 agcgccatccaagg 118 |||||||| |||| Sbjct: 2442666 cgcgccatcaaagg 2442653 Score = 42.1 bits (21), Expect = 6.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 134 tgccgttccaggggaagaggtcccagcagcagcagcaggacgctg 178 ||||| |||||||||||||| | | || ||||| ||||||||||| Sbjct: 2442554 tgccgctccaggggaagaggccgccgctgcagccgcaggacgctg 2442510
>emb|CT832082.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA031E05, full insert sequence Length = 653 Score = 115 bits (58), Expect = 5e-22 Identities = 177/216 (81%), Gaps = 3/216 (1%) Strand = Plus / Plus Query: 1045 ctggacaaggacaa---cagctcgacaattctctcgctgaagaaagcaggtcccgagatc 1101 |||||||||||||| |||||| ||||||| || ||||| ||||| ||||| |||||| Sbjct: 63 ctggacaaggacaatagcagctcaacaattcattcactgaaaaaagctggtcctgagatc 122 Query: 1102 actgaactgttgacacaatgctctattggtattgctggaactggtctggctgttcttctg 1161 | ||||||| ||||| ||||||||||||| || ||||||||||| ||||||||||||| Sbjct: 123 agtgaactgctgacaaaatgctctattggcatcgctggaactggcttggctgttcttctc 182 Query: 1162 tcggtcgtgtgcaagatcgccattggcgggaggactccttttgccgctactcggctgctg 1221 || || ||||||||||| || | || || || |||| |||| ||||| |||||| || Sbjct: 183 tcagttgtgtgcaagatggctaccggtatgaagagtcctattgctgctacgcggctggtg 242 Query: 1222 cacacaggcgttgggtttgggctcttctggctctcc 1257 |||| || ||||| |||||||||| ||||||||| Sbjct: 243 aacactggtgttggacttgggctcttttggctctcc 278 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1552 cgttgtaaattgtacagaattttgctggcagctcggtgtatatggaagat 1601 |||||| || ||||||||||||||||||||||| |||||||||| ||||| Sbjct: 591 cgttgtgaactgtacagaattttgctggcagcttggtgtatatgaaagat 640 Score = 48.1 bits (24), Expect = 0.10 Identities = 63/76 (82%) Strand = Plus / Plus Query: 1345 atacaaagaagcatgaacgatattctcttcagggccgtaactctcctggcaatcactgct 1404 ||||||| ||||||||||| ||||||||||| || | ||| | |||||||||||||| Sbjct: 369 atacaaaagagcatgaacgacattctcttcagagctatcactatattggcaatcactgct 428 Query: 1405 ttgaggtttgcataag 1420 || | |||||| |||| Sbjct: 429 tttaagtttgcgtaag 444
>ref|NM_001060006.1| Oryza sativa (japonica cultivar-group) Os04g0546300 (Os04g0546300) mRNA, complete cds Length = 2935 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 145 gggaagaggtcccagcagcagcagcag 171 |||||||| |||||||||||||||||| Sbjct: 577 gggaagagctcccagcagcagcagcag 603
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence Length = 141787 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 145 gggaagaggtcccagcagcagcagcag 171 |||||||| |||||||||||||||||| Sbjct: 64076 gggaagagctcccagcagcagcagcag 64102
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 145 gggaagaggtcccagcagcagcagcag 171 |||||||| |||||||||||||||||| Sbjct: 27328148 gggaagagctcccagcagcagcagcag 27328174
>emb|BX601646.5| Zebrafish DNA sequence from clone CH211-204J16 in linkage group 19, complete sequence Length = 163533 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1109 tgttgacacaatgctctattggtattgctgg 1139 |||||||||||||||| ||||||||| |||| Sbjct: 115537 tgttgacacaatgctcaattggtattactgg 115507
>emb|BX510306.17| Zebrafish DNA sequence from clone CH211-195F19 in linkage group 13, complete sequence Length = 194184 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1110 gttgacacaatgctctattggta 1132 ||||||||||||||||||||||| Sbjct: 125482 gttgacacaatgctctattggta 125460
>dbj|AK102945.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114L22, full insert sequence Length = 2937 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 145 gggaagaggtcccagcagcagcagcag 171 |||||||| |||||||||||||||||| Sbjct: 579 gggaagagctcccagcagcagcagcag 605
>emb|AL953866.5| Zebrafish DNA sequence from clone DKEY-60I9 in linkage group 21, complete sequence Length = 198925 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1110 gttgacacaatgctctattggta 1132 ||||||||||||||||||||||| Sbjct: 49889 gttgacacaatgctctattggta 49911
>emb|CT030200.17| Zebrafish DNA sequence from clone CH73-331M9 in linkage group 14, complete sequence Length = 113136 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1109 tgttgacacaatgctctattggtatt 1134 |||||||||||||||| ||||||||| Sbjct: 76788 tgttgacacaatgctcaattggtatt 76763
>ref|NM_001065484.1| Oryza sativa (japonica cultivar-group) Os07g0162600 (Os07g0162600) mRNA, complete cds Length = 1772 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 462 cggccaggccgccgccgccgcc 483
>ref|XM_524672.2| PREDICTED: Pan troglodytes similar to POU domain, class 3, transcription factor 1 (LOC469287), mRNA Length = 2804 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 412 cggccaggccgccgccgccgcc 391
>ref|XM_001124673.1| PREDICTED: Homo sapiens similar to GTP binding protein 6 (putative) (LOC727733), mRNA Length = 1114 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 198 gctctccccgcagcagcacctcctcg 223 ||||||||||||||||| |||||||| Sbjct: 254 gctctccccgcagcagctcctcctcg 229
>emb|CR450698.8| Zebrafish DNA sequence from clone DKEY-49C17 in linkage group 12, complete sequence Length = 155402 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1109 tgttgacacaatgctctattggtatt 1134 |||||||||||||||| ||||||||| Sbjct: 82719 tgttgacacaatgctcaattggtatt 82744
>emb|CR936976.15| Zebrafish DNA sequence from clone CH211-286N19 in linkage group 7, complete sequence Length = 154888 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1109 tgttgacacaatgctctattggtatt 1134 |||||||||||||||| ||||||||| Sbjct: 55302 tgttgacacaatgctcaattggtatt 55277
>ref|XM_392563.3| PREDICTED: Apis mellifera hypothetical LOC409034 (LOC409034), mRNA Length = 8256 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 77 cctccgccaccgcctcccccgtcctc 102 ||||||||||||||||| |||||||| Sbjct: 3683 cctccgccaccgcctcctccgtcctc 3658
>ref|NM_002699.3| Homo sapiens POU domain, class 3, transcription factor 1 (POU3F1), mRNA Length = 2928 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 555 cggccaggccgccgccgccgcc 534
>ref|XM_001110192.1| PREDICTED: Macaca mulatta similar to POU domain, class 3, transcription factor 1 (Octamer-binding transcription factor 6) (Oct-6) (POU-domain transcription factor SCIP) (LOC718015), mRNA Length = 1710 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 556 cggccaggccgccgccgccgcc 535
>emb|CR533579.7| Zebrafish DNA sequence from clone CH211-232J20 in linkage group 6, complete sequence Length = 199327 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1109 tgttgacacaatgctctattggtatt 1134 |||||||||||||||| ||||||||| Sbjct: 10311 tgttgacacaatgctcaattggtatt 10286
>emb|AL929056.21| Zebrafish DNA sequence from clone CH211-227I14 in linkage group 8, complete sequence Length = 157468 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1109 tgttgacacaatgctctattggtatt 1134 |||||||||||||||| ||||||||| Sbjct: 17790 tgttgacacaatgctcaattggtatt 17765
>gb|BC078673.1| Homo sapiens cDNA clone IMAGE:6090579 Length = 2676 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 1614 cggccaggccgccgccgccgcc 1635
>gb|AC098886.4| Mus musculus BAC clone RP23-122M21 from 4, complete sequence Length = 219825 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 113438 cggccaggccgccgccgccgcc 113459
>gb|BC003204.1| Mus musculus N-acylsphingosine amidohydrolase 1, mRNA (cDNA clone MGC:6722 IMAGE:3587042), complete cds Length = 2215 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 571 gcagaaaatcaacttatcctcc 592 |||||||||||||||||||||| Sbjct: 122 gcagaaaatcaacttatcctcc 143
>gb|AC138565.3| Gallus gallus clone TAM31-10L3, complete sequence Length = 174604 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1544 atgtgagacgttgtaaattgtacaga 1569 ||||||||||||||||| |||||||| Sbjct: 78339 atgtgagacgttgtaaagtgtacaga 78314
>emb|CR361552.19| Zebrafish DNA sequence from clone CH211-239J15 in linkage group 22, complete sequence Length = 166346 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1111 ttgacacaatgctctattggta 1132 |||||||||||||||||||||| Sbjct: 153283 ttgacacaatgctctattggta 153304
>ref|NM_053407.2| Rattus norvegicus N-acylsphingosine amidohydrolase 1 (Asah1), mRNA gb|BC061540.1| Rattus norvegicus N-acylsphingosine amidohydrolase 1, mRNA (cDNA clone MGC:72746 IMAGE:6919949), complete cds Length = 2439 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 571 gcagaaaatcaacttatcctcc 592 |||||||||||||||||||||| Sbjct: 126 gcagaaaatcaacttatcctcc 147
>emb|CR956424.18| Pig DNA sequence from clone PigE-234J24 on chromosome 6, complete sequence Length = 118731 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 26618 cggccaggccgccgccgccgcc 26639
>emb|CR759945.8| Zebrafish DNA sequence from clone CH211-167E4 in linkage group 13, complete sequence Length = 146960 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1111 ttgacacaatgctctattggta 1132 |||||||||||||||||||||| Sbjct: 25923 ttgacacaatgctctattggta 25902
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 3378242 cggccaggccgccgccgccgcc 3378221
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 276 ccaggccgccgccgccgcctac 297 |||||||||||||||||||||| Sbjct: 26303199 ccaggccgccgccgccgcctac 26303178
>dbj|AB221691.1| Mus musculus adult male liver DNA, clone:V02Y028A13 Length = 1350 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 514 cggccaggccgccgccgccgcc 493
>dbj|AK223412.1| Homo sapiens mRNA for pseudoautosomal GTP-binding protein-like protein variant, clone: FCC109C11 Length = 1726 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 198 gctctccccgcagcagcacctcctcg 223 ||||||||||||||||| |||||||| Sbjct: 242 gctctccccgcagcagctcctcctcg 217
>emb|AL139158.11| Human DNA sequence from clone RP5-884C9 on chromosome 1p34.1-35.3, complete sequence Length = 115614 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 20656 cggccaggccgccgccgccgcc 20677
>emb|BX957357.12| Zebrafish DNA sequence from clone DKEY-98L21 in linkage group 19, complete sequence Length = 226454 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1109 tgttgacacaatgctctattggtatt 1134 |||||||||||||||| ||||||||| Sbjct: 43086 tgttgacacaatgctcaattggtatt 43111
>emb|BX323007.11| Zebrafish DNA sequence from clone CH211-262K23 in linkage group 19, complete sequence Length = 130807 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1109 tgttgacacaatgctctattggtatt 1134 |||||||||||||||| ||||||||| Sbjct: 67250 tgttgacacaatgctcaattggtatt 67225
>gb|AC116369.5| Oryza sativa chromosome 3 BAC OSJNBb0113I20 genomic sequence, complete sequence Length = 122939 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 276 ccaggccgccgccgccgcctac 297 |||||||||||||||||||||| Sbjct: 41349 ccaggccgccgccgccgcctac 41328
>emb|Z18284.1|HSOCT6TR Homo sapiens Oct-6 transcription factor Length = 1733 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 739 cggccaggccgccgccgccgcc 718
>emb|X57482.1|MMOCT6R M.musculus Oct-6 mRNA for octamer binding protein Length = 1504 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 533 cggccaggccgccgccgccgcc 512
>emb|X56959.1|MDSCIP Mouse SCIP mRNA for a POU-domain transcription factor Length = 1516 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 549 cggccaggccgccgccgccgcc 528
>ref|NM_011141.1| Mus musculus POU domain, class 3, transcription factor 1 (Pou3f1), mRNA emb|X54628.1|MMOCT6GR M. musculus oct6 gene for the octamer binding factor oct6 Length = 1517 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 568 cggccaggccgccgccgccgcc 547
>emb|BX530030.12| Zebrafish DNA sequence from clone DKEY-38K9 in linkage group 21, complete sequence Length = 180154 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1111 ttgacacaatgctctattggta 1132 |||||||||||||||||||||| Sbjct: 19751 ttgacacaatgctctattggta 19730
>emb|BX511081.8| Zebrafish DNA sequence from clone DKEY-6B12 in linkage group 21, complete sequence Length = 210246 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1109 tgttgacacaatgctctattggtatt 1134 |||||||||||||||| ||||||||| Sbjct: 108731 tgttgacacaatgctcaattggtatt 108756
>emb|BX649488.9| Zebrafish DNA sequence from clone DKEY-21O6 in linkage group 22, complete sequence Length = 183230 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1111 ttgacacaatgctctattggta 1132 |||||||||||||||||||||| Sbjct: 100605 ttgacacaatgctctattggta 100584
>gb|AF214647.1|AF214647 Rattus norvegicus ceramidase mRNA, complete cds Length = 1280 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 571 gcagaaaatcaacttatcctcc 592 |||||||||||||||||||||| Sbjct: 103 gcagaaaatcaacttatcctcc 124
>gb|AC009970.10| Homo sapiens BAC clone RP11-440P5 from 2, complete sequence Length = 137009 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 274 ggccaggccgccgccgccgcct 295 |||||||||||||||||||||| Sbjct: 79391 ggccaggccgccgccgccgcct 79412
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 3969897 cggccaggccgccgccgccgcc 3969876
>emb|BX914203.24| Zebrafish DNA sequence from clone CH211-22E19 in linkage group 11, complete sequence Length = 179563 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1109 tgttgacacaatgctctattgg 1130 |||||||||||||||||||||| Sbjct: 70667 tgttgacacaatgctctattgg 70688
>emb|BX537314.17| Zebrafish DNA sequence from clone CH211-120E1 in linkage group 19, complete sequence Length = 168538 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1109 tgttgacacaatgctctattggtatt 1134 |||||||||||||||| ||||||||| Sbjct: 71738 tgttgacacaatgctcaattggtatt 71713
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 258 gatggtccccgggatcggccaggccgccgc 287 |||||| ||||||||||||| ||||||||| Sbjct: 2893772 gatggtgcccgggatcggcccggccgccgc 2893801
>dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0428D12 Length = 141678 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 18062 cggccaggccgccgccgccgcc 18041
>emb|BX510312.7| Zebrafish DNA sequence from clone CH211-240B21 in linkage group 5, complete sequence Length = 177177 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1109 tgttgacacaatgctctattggtatt 1134 ||||||||||||||| |||||||||| Sbjct: 62199 tgttgacacaatgctgtattggtatt 62224
>dbj|AK024630.1| Homo sapiens cDNA: FLJ20977 fis, clone ADSU01840, highly similar to HSY14391 Homo sapiens mRNA for putative GTP-binding protein Length = 1853 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 198 gctctccccgcagcagcacctcctcg 223 ||||||||||||||||| |||||||| Sbjct: 236 gctctccccgcagcagctcctcctcg 211
>dbj|AK106274.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-G12, full insert sequence Length = 1772 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 462 cggccaggccgccgccgccgcc 483
>dbj|AK105789.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H03, full insert sequence Length = 1189 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 462 cggccaggccgccgccgccgcc 483
>emb|BX005188.15| Zebrafish DNA sequence from clone CH211-89H11, complete sequence Length = 202570 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1109 tgttgacacaatgctctattggtatt 1134 |||||||||||||||| ||||||||| Sbjct: 87018 tgttgacacaatgctcaattggtatt 86993
>emb|BX247950.12| Zebrafish DNA sequence from clone CH211-51G21, complete sequence Length = 172752 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1109 tgttgacacaatgctctattggtatt 1134 |||||||||||||||| ||||||||| Sbjct: 139823 tgttgacacaatgctcaattggtatt 139798
>emb|BX322787.5| Zebrafish DNA sequence from clone CH211-198H5 in linkage group 7, complete sequence Length = 92049 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1111 ttgacacaatgctctattggta 1132 |||||||||||||||||||||| Sbjct: 57031 ttgacacaatgctctattggta 57052
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 187935 cggccaggccgccgccgccgcc 187914
>emb|BX294109.5| Zebrafish DNA sequence from clone CH211-283P23 in linkage group 2, complete sequence Length = 72487 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1111 ttgacacaatgctctattggta 1132 |||||||||||||||||||||| Sbjct: 36533 ttgacacaatgctctattggta 36512
>emb|BX004984.6| Zebrafish DNA sequence from clone DKEY-3N4, complete sequence Length = 264738 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1109 tgttgacacaatgctctattggtatt 1134 |||||||||||||||| ||||||||| Sbjct: 128773 tgttgacacaatgctcaattggtatt 128748
>emb|AL928668.7| Zebrafish DNA sequence from clone CH211-208M1, complete sequence Length = 241975 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1111 ttgacacaatgctctattggta 1132 |||||||||||||||||||||| Sbjct: 193932 ttgacacaatgctctattggta 193953
>gb|AC131238.3| Homo sapiens 12 BAC RP11-136L23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 60500 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 19037 cggccaggccgccgccgccgcc 19058
>emb|AL772273.11| Zebrafish DNA sequence from clone CH211-153P8, complete sequence Length = 171830 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1111 ttgacacaatgctctattggta 1132 |||||||||||||||||||||| Sbjct: 95980 ttgacacaatgctctattggta 96001
>emb|BX004887.2| Zebrafish DNA sequence from clone CH211-150E4, complete sequence Length = 186834 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1109 tgttgacacaatgctctattggtatt 1134 |||||||||||||||| ||||||||| Sbjct: 166587 tgttgacacaatgctcaattggtatt 166612
>emb|AL953891.10| Zebrafish DNA sequence from clone DKEY-28P22, complete sequence Length = 242282 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1109 tgttgacacaatgctctattggtatt 1134 |||||||||||||||| ||||||||| Sbjct: 58959 tgttgacacaatgctcaattggtatt 58934
>emb|AL606907.9| Mouse DNA sequence from clone RP23-230F2 on chromosome 4, complete sequence Length = 208265 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 101881 cggccaggccgccgccgccgcc 101902
>ref|NM_012227.1| Homo sapiens GTP binding protein 6 (putative) (GTPBP6), mRNA emb|Y14391.2|HSY14391 Homo sapiens mRNA for putative GTP-binding protein Length = 1867 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 198 gctctccccgcagcagcacctcctcg 223 ||||||||||||||||| |||||||| Sbjct: 255 gctctccccgcagcagctcctcctcg 230
>gb|L26494.1|HUMOCT6A Homo sapiens (oct-6) mRNA, complete cds Length = 2170 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 552 cggccaggccgccgccgccgcc 531
>gb|M63712.1|RATTST1POU Rat POU domain protein (Tst-1) mRNA, 3' end Length = 1549 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 418 cggccaggccgccgccgccgcc 397
>ref|NM_138838.1| Rattus norvegicus POU domain, class 3, transcription factor 1 (Pou3f1), mRNA gb|M72711.1|RATSCIP Rat transcriptional repressor of myelin-specific genes (SCIP) mRNA, complete cds Length = 2977 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 557 cggccaggccgccgccgccgcc 536
>gb|M88302.1|MUSPOUDOMD Mouse scip POU-domain protein, complete cds Length = 2766 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 cggccaggccgccgccgccgcc 294 |||||||||||||||||||||| Sbjct: 1214 cggccaggccgccgccgccgcc 1193
>ref|XM_001238744.1| Eimeria tenella str. Houghton hypothetical protein (ETEN145) mRNA, complete cds Length = 4701 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 aggtcccagcagcagcagcag 171 ||||||||||||||||||||| Sbjct: 1742 aggtcccagcagcagcagcag 1762
>emb|CT573126.9| Zebrafish DNA sequence from clone CH73-1O10 in linkage group 4, complete sequence Length = 89546 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1108 ctgttgacacaatgctctattggta 1132 ||||||||||||||||| ||||||| Sbjct: 43273 ctgttgacacaatgctcaattggta 43249
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gccgccgccgcctaccaggcc 303 ||||||||||||||||||||| Sbjct: 2945316 gccgccgccgcctaccaggcc 2945296
>emb|CT831721.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA032L01, full insert sequence Length = 1105 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 71 tcctcgcctccgccaccgcctcccccgtcctcc 103 |||||||||||||| ||||||||| || ||||| Sbjct: 261 tcctcgcctccgccgccgcctcccacgacctcc 293
>ref|NM_001074935.1| Oryza sativa (japonica cultivar-group) Os11g0660300 (Os11g0660300) mRNA, complete cds Length = 1205 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 cctcgcctccgccaccgcctccccc 96 ||||||||||||| ||||||||||| Sbjct: 259 cctcgcctccgccgccgcctccccc 283
>ref|NM_001052875.1| Oryza sativa (japonica cultivar-group) Os02g0225300 (Os02g0225300) mRNA, partial cds Length = 1075 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 71 tcctcgcctccgccaccgcctcccccgtcctcc 103 |||||||||||||| ||||||||| || ||||| Sbjct: 262 tcctcgcctccgccgccgcctcccacgacctcc 294
>ref|NM_001051716.1| Oryza sativa (japonica cultivar-group) Os01g0914600 (Os01g0914600) mRNA, complete cds Length = 1782 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 cctcgcctccgccaccgcctccccc 96 ||||||||||||| ||||||||||| Sbjct: 169 cctcgcctccgcctccgcctccccc 193
>ref|XR_018834.1| PREDICTED: Homo sapiens similar to ligand-gated ion channel subunit (LOC339979), mRNA Length = 1043 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 agcagcagcagcaggacgctg 178 ||||||||||||||||||||| Sbjct: 721 agcagcagcagcaggacgctg 701
>ref|XR_016706.1| PREDICTED: Homo sapiens similar to ligand-gated ion channel subunit (LOC645003), mRNA Length = 653 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 agcagcagcagcaggacgctg 178 ||||||||||||||||||||| Sbjct: 331 agcagcagcagcaggacgctg 311
>gb|AC188186.2| Taeniopygia guttata BAC clone TGMCBa-34H12 from chromosome unknown, complete sequence Length = 118331 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1333 gttgctgtgaagatacaaaga 1353 ||||||||||||||||||||| Sbjct: 10133 gttgctgtgaagatacaaaga 10113
>emb|CR339055.8| Zebrafish DNA sequence from clone CH211-67C24 in linkage group 23, complete sequence Length = 163984 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1112 tgacacaatgctctattggta 1132 ||||||||||||||||||||| Sbjct: 94674 tgacacaatgctctattggta 94654
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 cgccgccgccgcctaccaggc 302 ||||||||||||||||||||| Sbjct: 5331170 cgccgccgccgcctaccaggc 5331150
>gb|AC189368.1| Brassica rapa subsp. pekinensis clone KBrB047A09, complete sequence Length = 142540 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 267 cgggatcggccaggccgccgccgcc 291 |||||||||| |||||||||||||| Sbjct: 62591 cgggatcggcgaggccgccgccgcc 62567
>gb|DQ774519.1| Synthetic construct Vibrio cholerae clone FLH200719.01F vieS gene, complete sequence Length = 3441 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 930 aaacgtgaaggcaaaatctccatca 954 |||||||||| |||||||||||||| Sbjct: 1952 aaacgtgaagccaaaatctccatca 1928
>ref|XM_001056128.1| PREDICTED: Rattus norvegicus GLI-Kruppel family member GLI1 (Gli1), mRNA Length = 3912 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 aggtcccagcagcagcagcag 171 ||||||||||||||||||||| Sbjct: 2993 aggtcccagcagcagcagcag 3013
>ref|XM_345832.3| PREDICTED: Rattus norvegicus GLI-Kruppel family member GLI1 (Gli1), mRNA Length = 3912 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 aggtcccagcagcagcagcag 171 ||||||||||||||||||||| Sbjct: 2993 aggtcccagcagcagcagcag 3013
>ref|NW_001509355.1| Eimeria tenella str. Houghton chromosome 1 emb|AM269894.1| Eimeria tenella chromosome 1, ordered contigs Length = 1347714 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 aggtcccagcagcagcagcag 171 ||||||||||||||||||||| Sbjct: 1039189 aggtcccagcagcagcagcag 1039169
>ref|XM_001114201.1| PREDICTED: Macaca mulatta similar to synaptotagmin 3 (LOC719650), mRNA Length = 1918 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ccgccgccgcctaccaggcct 304 ||||||||||||||||||||| Sbjct: 612 ccgccgccgcctaccaggcct 592
>emb|CR847984.14| Zebrafish DNA sequence from clone DKEY-61O18 in linkage group 11, complete sequence Length = 78361 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1110 gttgacacaatgctctattggtatt 1134 ||||||||||||||| ||||||||| Sbjct: 41603 gttgacacaatgctcaattggtatt 41627
>emb|AL732354.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0901F07, complete sequence Length = 110682 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 279 ggccgccgccgccgcctaccaggcc 303 ||||||||||||||||| ||||||| Sbjct: 32085 ggccgccgccgccgcctcccaggcc 32109
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 cggccaggccgccgccgccgc 293 ||||||||||||||||||||| Sbjct: 3457942 cggccaggccgccgccgccgc 3457922
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 273 cggccaggccgccgccgccgcctaccagg 301 ||||||||||||||||| || |||||||| Sbjct: 3892522 cggccaggccgccgccggcgtctaccagg 3892494
>ref|NM_026821.2| Mus musculus DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed (D4Bwg0951e), mRNA gb|BC030404.1| Mus musculus DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed, mRNA (cDNA clone MGC:40727 IMAGE:5354204), complete cds Length = 1717 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 gccaggccgccgccgccgcct 295 ||||||||||||||||||||| Sbjct: 602 gccaggccgccgccgccgcct 622
>gb|AY023154.1| Oryza sativa microsatellite MRG5479 containing (GCC)X9, genomic sequence Length = 227 Score = 42.1 bits (21), Expect = 6.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 134 tgccgttccaggggaagaggtcccagcagcagcagcaggacgctg 178 ||||| |||||||||||||| | | || ||||| ||||||||||| Sbjct: 42 tgccgctccaggggaagaggccgccgctgcagccgcaggacgctg 86
>gb|BC021501.1| Mus musculus DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed, mRNA (cDNA clone MGC:38429 IMAGE:5346437), complete cds Length = 1598 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 gccaggccgccgccgccgcct 295 ||||||||||||||||||||| Sbjct: 485 gccaggccgccgccgccgcct 505
>gb|AC147367.3| Mus musculus BAC clone RP24-424M5 from chromosome 18, complete sequence Length = 175316 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1473 ggttcaggagtgcggtttctg 1493 ||||||||||||||||||||| Sbjct: 143093 ggttcaggagtgcggtttctg 143113
>gb|AC146504.2| Danio rerio clone CH211-86L16, complete sequence Length = 181948 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1108 ctgttgacacaatgctctattggta 1132 ||||||||||||||||| ||||||| Sbjct: 154368 ctgttgacacaatgctcaattggta 154344
>gb|AC124669.8| Mus musculus chromosome 1, clone RP23-110B5, complete sequence Length = 201456 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 aggtcccagcagcagcagcag 171 ||||||||||||||||||||| Sbjct: 49768 aggtcccagcagcagcagcag 49748
>gb|AC108870.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0682E05, complete sequence Length = 162223 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 cctcgcctccgccaccgcctccccc 96 ||||||||||||| ||||||||||| Sbjct: 123733 cctcgcctccgccgccgcctccccc 123757
>gb|AC133186.4| Mus musculus BAC clone RP23-320D8 from chromosome 18, complete sequence Length = 209380 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1473 ggttcaggagtgcggtttctg 1493 ||||||||||||||||||||| Sbjct: 109454 ggttcaggagtgcggtttctg 109434
>gb|AC076968.38| Homo sapiens 12 BAC RP11-686F15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 203038 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 280 gccgccgccgccgcctaccaggcct 304 |||||||||||||||| |||||||| Sbjct: 51998 gccgccgccgccgccttccaggcct 52022
>gb|AE004243.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 151 of 251 of the complete chromosome Length = 10208 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 930 aaacgtgaaggcaaaatctccatca 954 |||||||||| |||||||||||||| Sbjct: 7606 aaacgtgaagccaaaatctccatca 7630
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 cggccaggccgccgccgccgc 293 ||||||||||||||||||||| Sbjct: 3878168 cggccaggccgccgccgccgc 3878148
>dbj|AK127333.1| Homo sapiens cDNA FLJ45404 fis, clone BRHIP3029670 Length = 4370 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 cctcctcgcctccgccaccgcctcc 93 ||||||| ||||||||||||||||| Sbjct: 858 cctcctctcctccgccaccgcctcc 834
>dbj|AB232918.1| Oryzias latipes hox gene cluster, complete cds Length = 268959 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 ggccgccgccgccgcctacca 299 ||||||||||||||||||||| Sbjct: 153117 ggccgccgccgccgcctacca 153137
>gb|AC016931.21| Homo sapiens 3 BAC RP11-22E12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169032 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1486 ggtttctgtaggactaaagtg 1506 ||||||||||||||||||||| Sbjct: 27606 ggtttctgtaggactaaagtg 27626
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 gccgcgctcatcgacgcgcaa 333 ||||||||||||||||||||| Sbjct: 741567 gccgcgctcatcgacgcgcaa 741587
>gb|BC050076.1| Homo sapiens nephronophthisis 4, mRNA (cDNA clone IMAGE:5298892), complete cds Length = 3981 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 cctcctcgcctccgccaccgcctcc 93 ||||||| ||||||||||||||||| Sbjct: 757 cctcctctcctccgccaccgcctcc 733
>gb|BC028627.1| Homo sapiens nephronophthisis 4, mRNA (cDNA clone IMAGE:4827174), complete cds Length = 3986 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 cctcctcgcctccgccaccgcctcc 93 ||||||| ||||||||||||||||| Sbjct: 762 cctcctctcctccgccaccgcctcc 738
>gb|AC159890.2| Mus musculus BAC clone RP24-80J11 from chromosome 9, complete sequence Length = 226770 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 955 aagaagaaacagaaaggaaaa 975 ||||||||||||||||||||| Sbjct: 195578 aagaagaaacagaaaggaaaa 195598
>dbj|AB207983.1| Oryzias latipes gene for hoxA11a, complete cds Length = 1674 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 ggccgccgccgccgcctacca 299 ||||||||||||||||||||| Sbjct: 345 ggccgccgccgccgcctacca 365
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 cggccaggccgccgccgccgc 293 ||||||||||||||||||||| Sbjct: 1099295 cggccaggccgccgccgccgc 1099315
>emb|BX571706.24| Zebrafish DNA sequence from clone DKEYP-123H11 in linkage group 11, complete sequence Length = 196333 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1110 gttgacacaatgctctattggtatt 1134 ||||||||||||||| ||||||||| Sbjct: 111563 gttgacacaatgctcaattggtatt 111539
>emb|CR450690.7| Zebrafish DNA sequence from clone CH211-78C14 in linkage group 11, complete sequence Length = 163328 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1109 tgttgacacaatgctctattg 1129 ||||||||||||||||||||| Sbjct: 21679 tgttgacacaatgctctattg 21699
>gb|AF426312.1| Rattus norvegicus organic anion transporting polypeptide 2 (Oatp2) gene, 5' flanking sequence Length = 9576 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 952 tcaaagaagaaacagaaaggaaaaa 976 |||||||||||||| |||||||||| Sbjct: 4640 tcaaagaagaaacaaaaaggaaaaa 4616
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 cctcgcctccgccaccgcctccccc 96 ||||||||||||| ||||||||||| Sbjct: 25633686 cctcgcctccgccgccgcctccccc 25633710
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 cggccaggccgccgccgccgc 293 ||||||||||||||||||||| Sbjct: 2731400 cggccaggccgccgccgccgc 2731380
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 71 tcctcgcctccgccaccgcctcccccgtcctcc 103 |||||||||||||| ||||||||| || ||||| Sbjct: 7033703 tcctcgcctccgccgccgcctcccacgacctcc 7033671
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 72 cctcgcctccgccaccgcctccccc 96 ||||||||||||| ||||||||||| Sbjct: 39844517 cctcgcctccgcctccgcctccccc 39844493
>gb|AC074105.3| Oryza sativa chromosome 10 clone OSJNBa0030B02, complete sequence Length = 146836 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 cggccaggccgccgccgccgc 293 ||||||||||||||||||||| Sbjct: 58176 cggccaggccgccgccgccgc 58156
>emb|AL356693.37| Human DNA sequence from clone RP11-33M12 on chromosome 1 Contains the 3' end of the NPHP4 gene for nephronophthisis 4, complete sequence Length = 72610 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 cctcctcgcctccgccaccgcctcc 93 ||||||| ||||||||||||||||| Sbjct: 53442 cctcctctcctccgccaccgcctcc 53466
>emb|AL139241.11| Human DNA sequence from clone RP11-34A14 on chromosome 10 Contains the 3' end of gene FLJ37160, the LOXL4 gene for lysyl oxidase-like 4, a novel gene and a CpG island, complete sequence Length = 188192 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 949 ccatcaaagaagaaacagaaa 969 ||||||||||||||||||||| Sbjct: 27672 ccatcaaagaagaaacagaaa 27692
>emb|AL137245.11| Human DNA sequence from clone RP11-196I2 on chromosome 13 Contains a novel gene, complete sequence Length = 146994 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 989 gtgacatgtatcagaataact 1009 ||||||||||||||||||||| Sbjct: 77938 gtgacatgtatcagaataact 77918
>emb|CR388028.12| Zebrafish DNA sequence from clone DKEYP-36B12 in linkage group 8, complete sequence Length = 173485 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1108 ctgttgacacaatgctctattggta 1132 ||||||||||||||||| ||||||| Sbjct: 149978 ctgttgacacaatgctcaattggta 150002
>ref|NM_182673.1| Rattus norvegicus ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent) (Rnasel), mRNA gb|AY262823.1| Rattus norvegicus 2',5'-oligoisoadenylate synthetase-dependent ribonuclease L (Rnasel) mRNA, complete cds Length = 2499 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 978 catcaatgagcgtgacatgta 998 ||||||||||||||||||||| Sbjct: 383 catcaatgagcgtgacatgta 403
>gb|AF365974.1|AF365974 Oryzias latipes transcription factor SOHo mRNA, complete cds Length = 681 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 cagcagcagcagcaggacgct 177 ||||||||||||||||||||| Sbjct: 259 cagcagcagcagcaggacgct 279
>emb|CR790375.9| Zebrafish DNA sequence from clone CH211-251O16 in linkage group 4, complete sequence Length = 153499 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1108 ctgttgacacaatgctctattggta 1132 ||||||||||||||||| ||||||| Sbjct: 61656 ctgttgacacaatgctcaattggta 61680
>emb|CR751229.6| Zebrafish DNA sequence from clone CH211-116I17 in linkage group 4, complete sequence Length = 58988 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1108 ctgttgacacaatgctctattggta 1132 ||||||||||||||||| ||||||| Sbjct: 15723 ctgttgacacaatgctcaattggta 15747
>emb|BX537287.8| Zebrafish DNA sequence from clone CH211-206O8 in linkage group 19, complete sequence Length = 195505 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1110 gttgacacaatgctctattggtatt 1134 ||||||||||||||| ||||||||| Sbjct: 16577 gttgacacaatgctcaattggtatt 16601
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 gccgcctaccaggccttcgac 309 ||||||||||||||||||||| Sbjct: 2552706 gccgcctaccaggccttcgac 2552726
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 75 cgcctccgccaccgcctcccccgtc 99 |||| |||||||||||||||||||| Sbjct: 132625 cgccgccgccaccgcctcccccgtc 132601
>emb|AL672185.7| Zebrafish DNA sequence from clone BUSM1-172P2 in linkage group 19 Contains the 3' part of the abcb3l2 gene for ATP-binding cassette, sub-family B (MDR/TAP), member 3 like 2, the 5' part of the mhc1uaa gene (major histocompatibility complex class I UAA protein) and four CpG islands, complete sequence Length = 47697 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1110 gttgacacaatgctctattggtatt 1134 ||||||||||||||| ||||||||| Sbjct: 44691 gttgacacaatgctcaattggtatt 44667
>dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004D12 Length = 138136 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 72 cctcgcctccgccaccgcctccccc 96 ||||||||||||| ||||||||||| Sbjct: 25225 cctcgcctccgcctccgcctccccc 25201
>emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in linkage group 3, complete sequence Length = 241961 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1110 gttgacacaatgctctattggtatt 1134 ||||||||||||||| ||||||||| Sbjct: 84204 gttgacacaatgctcaattggtatt 84228
>emb|CR846083.9| Zebrafish DNA sequence from clone DKEYP-34A6 in linkage group 14, complete sequence Length = 163337 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1110 gttgacacaatgctctattggtatt 1134 ||||||||||||||| ||||||||| Sbjct: 130359 gttgacacaatgctcaattggtatt 130383
>emb|BX294100.11| Zebrafish DNA sequence from clone DKEYP-2G11 in linkage group 12, complete sequence Length = 173405 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1110 gttgacacaatgctctattggtatt 1134 ||||||||||||||| ||||||||| Sbjct: 24535 gttgacacaatgctcaattggtatt 24511
>emb|BX546485.12| Zebrafish DNA sequence from clone RP71-39A17 in linkage group 18, complete sequence Length = 153332 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1110 gttgacacaatgctctattggtatt 1134 ||||||||||||||| ||||||||| Sbjct: 62316 gttgacacaatgctcaattggtatt 62340
>emb|BX640470.7| Zebrafish DNA sequence from clone CH211-205H10 in linkage group 11, complete sequence Length = 131868 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1109 tgttgacacaatgctctattg 1129 ||||||||||||||||||||| Sbjct: 59373 tgttgacacaatgctctattg 59353
>gb|AC111200.7| Homo sapiens BAC clone RP11-1283H4 from 2, complete sequence Length = 186752 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 ggccaggccgccgccgccgcc 294 ||||||||||||||||||||| Sbjct: 81074 ggccaggccgccgccgccgcc 81054
>gb|AC157020.8| Mus musculus 10 BAC RP24-459C13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 183687 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 763 agagacttactttcagttttc 783 ||||||||||||||||||||| Sbjct: 56491 agagacttactttcagttttc 56471
>gb|AC156541.7| Mus musculus chromosome 1, clone RP23-478I8, complete sequence Length = 173297 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 649 tcagaaaaccaacttatcatc 669 ||||||||||||||||||||| Sbjct: 76635 tcagaaaaccaacttatcatc 76615
>gb|AY741536.1| Pennisetum glaucum TEL1 gene, partial sequence Length = 3162 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 ggccaggccgccgccgccgcc 294 ||||||||||||||||||||| Sbjct: 400 ggccaggccgccgccgccgcc 380
>dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0495C02 Length = 151467 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 71 tcctcgcctccgccaccgcctcccccgtcctcc 103 |||||||||||||| ||||||||| || ||||| Sbjct: 37122 tcctcgcctccgccgccgcctcccacgacctcc 37090
>dbj|AP004779.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0470A03 Length = 133167 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 71 tcctcgcctccgccaccgcctcccccgtcctcc 103 |||||||||||||| ||||||||| || ||||| Sbjct: 127325 tcctcgcctccgccgccgcctcccacgacctcc 127293
>emb|CR524481.5| Zebrafish DNA sequence from clone CH211-81C11 in linkage group 22, complete sequence Length = 191642 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1108 ctgttgacacaatgctctattggta 1132 ||||||||||||||||| ||||||| Sbjct: 154302 ctgttgacacaatgctcaattggta 154278
>gb|AC097721.3| Homo sapiens BAC clone RP11-36O6 from 2, complete sequence Length = 144493 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 954 aaagaagaaacagaaaggaaa 974 ||||||||||||||||||||| Sbjct: 101862 aaagaagaaacagaaaggaaa 101882
>ref|XM_950856.1| Neurospora crassa OR74A hypothetical protein (NCU06407.1) partial mRNA Length = 3396 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 gccgccgccgccgcctaccag 300 ||||||||||||||||||||| Sbjct: 3105 gccgccgccgccgcctaccag 3085
>dbj|AK109657.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-F06, full insert sequence Length = 1206 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 cctcgcctccgccaccgcctccccc 96 ||||||||||||| ||||||||||| Sbjct: 260 cctcgcctccgccgccgcctccccc 284
>emb|BX470224.5| Zebrafish DNA sequence from clone DKEY-13N15 in linkage group 5, complete sequence Length = 244492 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1110 gttgacacaatgctctattggtattgctggaac 1142 ||||||||||||||| ||||||| || |||||| Sbjct: 226652 gttgacacaatgctcaattggtactgatggaac 226684
>dbj|AK106012.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-B03, full insert sequence Length = 1782 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 cctcgcctccgccaccgcctccccc 96 ||||||||||||| ||||||||||| Sbjct: 169 cctcgcctccgcctccgcctccccc 193
>emb|BX322616.8| Zebrafish DNA sequence from clone DKEY-21K24 in linkage group 25, complete sequence Length = 232304 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1110 gttgacacaatgctctattggtatt 1134 ||||||||||||||| ||||||||| Sbjct: 161279 gttgacacaatgctcgattggtatt 161255
>emb|BX930374.2| Gallus gallus finished cDNA, clone ChEST626a14 Length = 611 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 cccagcagcagcagcaggacg 175 ||||||||||||||||||||| Sbjct: 58 cccagcagcagcagcaggacg 38
>dbj|AK064695.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-F08, full insert sequence Length = 1075 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 71 tcctcgcctccgccaccgcctcccccgtcctcc 103 |||||||||||||| ||||||||| || ||||| Sbjct: 262 tcctcgcctccgccgccgcctcccacgacctcc 294
>emb|BX321877.7| Zebrafish DNA sequence from clone DKEYP-27B10 in linkage group 18, complete sequence Length = 127643 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1110 gttgacacaatgctctattggtatt 1134 ||||||||||||||| ||||||||| Sbjct: 43102 gttgacacaatgctcaattggtatt 43078
>emb|BX934316.1| Gallus gallus finished cDNA, clone ChEST43h24 Length = 967 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 cccagcagcagcagcaggacg 175 ||||||||||||||||||||| Sbjct: 57 cccagcagcagcagcaggacg 37
>emb|AL844604.4| Mouse DNA sequence from clone RP24-318C20 on chromosome 4, complete sequence Length = 173133 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 gccaggccgccgccgccgcct 295 ||||||||||||||||||||| Sbjct: 36117 gccaggccgccgccgccgcct 36137
>emb|AL773520.3| Mouse DNA sequence from clone RP23-350F23 on chromosome 4, complete sequence Length = 214496 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 gccaggccgccgccgccgcct 295 ||||||||||||||||||||| Sbjct: 14207 gccaggccgccgccgccgcct 14227
>emb|AL928824.13| Zebrafish DNA sequence from clone CH211-105D18 in linkage group 6, complete sequence Length = 189742 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1110 gttgacacaatgctctattggtatt 1134 ||||||||||||||| ||||||||| Sbjct: 28053 gttgacacaatgctcaattggtatt 28029
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 310 agcgccgcgctcatcgacgcgcaag 334 ||||||||||| ||||||||||||| Sbjct: 631132 agcgccgcgcttatcgacgcgcaag 631156
>gb|AC101783.12| Mus musculus chromosome 1, clone RP24-136B19, complete sequence Length = 169909 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 649 tcagaaaaccaacttatcatc 669 ||||||||||||||||||||| Sbjct: 142339 tcagaaaaccaacttatcatc 142359
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gccgccgccgcctaccaggcc 303 ||||||||||||||||||||| Sbjct: 4615809 gccgccgccgcctaccaggcc 4615789
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 gccgccgccgcctaccaggcc 303 ||||||||||||||||||||| Sbjct: 1665879 gccgccgccgcctaccaggcc 1665899
>gb|AC005510.3|AC005510 Homo sapiens chromosome 4 clone B368A9 map 4q25, complete sequence Length = 168468 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 agcagcagcagcaggacgctg 178 ||||||||||||||||||||| Sbjct: 138063 agcagcagcagcaggacgctg 138043
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 cggccaggccgccgccgccgc 293 ||||||||||||||||||||| Sbjct: 3878842 cggccaggccgccgccgccgc 3878822
>emb|CR933737.7| Zebrafish DNA sequence from clone DKEY-35B9 in linkage group 11, complete sequence Length = 76356 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1109 tgttgacacaatgctctattg 1129 ||||||||||||||||||||| Sbjct: 17009 tgttgacacaatgctctattg 17029
>gb|AF031552.1|AF031552 Vibrio cholerae magnesium transporter (mgtE) gene, partial cds; sensor kinase (vieS), response regulator (vieA), and response regulator (vieB) genes, complete cds; and collagenase (vcc) gene, partial cds Length = 9861 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 930 aaacgtgaaggcaaaatctccatca 954 |||||||||| |||||||||||||| Sbjct: 3869 aaacgtgaagccaaaatctccatca 3845
>gb|AF059247.1|AF059247 Crithidia fasciculata RNA guanylyltransferase gene, complete cds Length = 2466 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 cctcctcgcctccgccaccgcctcc 93 |||||||||| |||||||||||||| Sbjct: 342 cctcctcgccaccgccaccgcctcc 366
>emb|CT030644.8| Mouse DNA sequence from clone RP24-82E11 on chromosome 9, complete sequence Length = 211707 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 955 aagaagaaacagaaaggaaaa 975 ||||||||||||||||||||| Sbjct: 134674 aagaagaaacagaaaggaaaa 134694
>gb|AF499468.1| Mus musculus MT-MC1 (Mtmc1) gene, complete cds Length = 12008 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 763 agagacttactttcagttttc 783 ||||||||||||||||||||| Sbjct: 8176 agagacttactttcagttttc 8156
>gb|AC165413.16| Mus musculus chromosome 1, clone RP23-242C11, complete sequence Length = 186380 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1527 tgatggcctcatagaaaatgt 1547 ||||||||||||||||||||| Sbjct: 100471 tgatggcctcatagaaaatgt 100491 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 286,437,110 Number of extensions: 16554478 Number of successful extensions: 737950 Number of sequences better than 10.0: 178 Number of HSP's gapped: 737921 Number of HSP's successfully gapped: 236 Length of query: 1626 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1603 Effective length of database: 18,503,978,556 Effective search space: 29661877625268 Effective search space used: 29661877625268 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
