ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf159d15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9K015:NORM_NEIMB Probable multidrug resistance protein norM - N... 31 6.5

>Q9K015:NORM_NEIMB Probable multidrug resistance protein norM - Neisseria meningitidis|
           serogroup B
          Length = 459
 Score = 30.8 bits (68), Expect = 6.5
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
 Frame = +1

Query: 490 AIKGQKVTPTPIHTHST---NIRVIC*TILVVH-NMSVYGLEELVSTSVCIVSVTLVGML 657
           A++G KVT  P+  H+       ++   +L    NM +YG    +  S+ I ++ LV   
Sbjct: 386 ALRGYKVTKVPMFIHAAAFWGCGLLPGYLLAYRFNMGIYGFWTALIASLTIAAIALV--- 442

Query: 658 WCID*CRK 681
           WC++ C +
Sbjct: 443 WCLELCSR 450


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 98,709,259
Number of extensions: 1627806
Number of successful extensions: 4072
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4069
Number of HSP's successfully gapped: 1
Length of query: 266
Length of database: 100,686,439
Length adjustment: 111
Effective length of query: 155
Effective length of database: 70,239,694
Effective search space: 10887152570
Effective search space used: 10887152570
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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