ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf161n13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q8BZI6:CV013_MOUSE Uncharacterized protein C22orf13 homolog - Mu... 133 2e-30
2Q96NT3:CV013_HUMAN Uncharacterized protein C22orf13 - Homo sapie... 132 3e-30
3P15884:ITF2_HUMAN Transcription factor 4 - Homo sapiens (Human) 32 4.8
4Q28833:VWF_PIG von Willebrand factor precursor - Sus scrofa (Pig) 32 6.3
5P14727:YAV1_XANCV Hypothetical 122 kDa avirulence protein in avr... 32 8.2
6Q60722:ITF2_MOUSE Transcription factor 4 - Mus musculus (Mouse) 32 8.2

>Q8BZI6:CV013_MOUSE Uncharacterized protein C22orf13 homolog - Mus musculus (Mouse)|
          Length = 239
 Score =  133 bits (335), Expect = 2e-30
 Identities = 80/219 (36%), Positives = 118/219 (53%), Gaps = 9/219 (4%)
 Frame = +1

Query: 376  IDVPHVQQAFTWDCGLACVLMVLRTLG-LDCCHGIAELEKLCRTTSVWTVDLAYLLHKFS 552
            + VP +QQ + WDCGLAC  MVLR LG LD       L++L  T S+WT+DLAYL+  F 
Sbjct: 20   LPVPIIQQLYHWDCGLACSRMVLRYLGQLDDGEFENALQELQLTRSIWTIDLAYLMRHFG 79

Query: 553  VNFSFFTVTIGANPQYSGETFYREQLQEDIDRVDELFGKALDAGISIQCRSISAYDIAFL 732
            V   F T T+G +  Y  ++FYR+    +  RV++LF +A    + ++  ++S  DI   
Sbjct: 80   VRHRFCTQTLGVDKGYKNQSFYRKHFDTEETRVNQLFAQAKACKVQVEKCTVSVQDIQVH 139

Query: 733  LLSGHCIAIALVDKSKLNSSWMND--------VHDMQQFDEDSDYMGHYVVICGYDADTC 888
            L  GH +AI LV+   L+    +             + F    DY GH++V+ GY+  T 
Sbjct: 140  LAQGH-VAIVLVNSGVLHCDLCSSPVKYCCFTPSGHRCFCRTPDYQGHFIVLRGYNRATG 198

Query: 889  EFEIRDPASSRKREMVPMKSLDEARKSFGTDEDILLVSL 1005
                 +PA + +     + + +EAR S+GTDEDIL V L
Sbjct: 199  CIFYNNPAYADRMCSTSISNFEEARTSYGTDEDILFVYL 237



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>Q96NT3:CV013_HUMAN Uncharacterized protein C22orf13 - Homo sapiens (Human)|
          Length = 240

 Score =  132 bits (333), Expect = 3e-30
 Identities = 82/220 (37%), Positives = 116/220 (52%), Gaps = 10/220 (4%)
 Frame = +1

Query: 376  IDVPHVQQAFTWDCGLACVLMVLRTLG-LDCCHGIAELEKLCRTTSVWTVDLAYLLHKFS 552
            + VP +QQ + WDCGLAC  MVLR LG LD       L+KL  T S+WT+DLAYL+H F 
Sbjct: 20   LPVPVIQQLYHWDCGLACSRMVLRYLGQLDDSEFERALQKLQLTRSIWTIDLAYLMHHFG 79

Query: 553  VNFSFFTVTIGANPQYSGETFYREQLQEDIDRVDELFGKALDAGISIQCRSISAYDIAFL 732
            V   F T T+G +  Y  ++FYR+    +  RV++LF +A    + ++  ++S  DI   
Sbjct: 80   VRHRFCTQTLGVDKGYKNQSFYRKHFDTEETRVNQLFAQAKACKVLVEKCTVSVKDIQAH 139

Query: 733  LLSGHCIAIALVDKSKLNSSWMND--------VHDMQQFDEDSDYMGHYVVICGYDADT- 885
            L  GH +AI LV+   L+    +               F    DY GH++V+ GY+  T 
Sbjct: 140  LAQGH-VAIVLVNSGVLHCDLCSSPVKYCCFTPSGHHCFCRTPDYQGHFIVLRGYNRATG 198

Query: 886  CEFEIRDPASSRKREMVPMKSLDEARKSFGTDEDILLVSL 1005
            C F      +        + + +EAR S+GTDEDIL V L
Sbjct: 199  CIFYNNPAYADPGMCSTSISNFEEARTSYGTDEDILFVYL 238



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>P15884:ITF2_HUMAN Transcription factor 4 - Homo sapiens (Human)|
          Length = 667

 Score = 32.3 bits (72), Expect = 4.8
 Identities = 20/71 (28%), Positives = 35/71 (49%)
 Frame = -2

Query: 988 YPHQFQRICGPHLSFSWAPFHAS*NWLDPLSQTRKYQHRSHILQHNAPCNLNPHQTVAYH 809
           +P  F    G H S  W+    S + ++         + SHI Q ++ C+L+PH+ ++Y 
Sbjct: 211 FPSSFFMQDGHHSSDPWS----SSSGMNQPGYAGMLGNSSHIPQSSSYCSLHPHERLSYP 266

Query: 808 VHHSSKRNLTL 776
            H S+  N +L
Sbjct: 267 SHSSADINSSL 277



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>Q28833:VWF_PIG von Willebrand factor precursor - Sus scrofa (Pig)|
          Length = 2482

 Score = 32.0 bits (71), Expect = 6.3
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -2

Query: 868 HILQHNAPCNLNPHQTVAYHVHHSSKRNLTLIYPLVQLLCSA 743
           H  +  AP +L P   ++  + H SKR+L+   P+V+L+C A
Sbjct: 411 HCSRAGAPGSLQPEVVLSSPLSHRSKRSLSCRPPMVKLVCPA 452



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>P14727:YAV1_XANCV Hypothetical 122 kDa avirulence protein in avrBs3 region -|
           Xanthomonas campestris pv. vesicatoria
          Length = 1164

 Score = 31.6 bits (70), Expect = 8.2
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -2

Query: 850 APCNLNPHQTVAYHVHHSSKRNLTLIYPLVQLLCSA 743
           AP NL P Q VA   H   K+ L  +  L+ +LC A
Sbjct: 285 APLNLTPEQVVAIASHDGGKQALETVQRLLPVLCQA 320



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>Q60722:ITF2_MOUSE Transcription factor 4 - Mus musculus (Mouse)|
          Length = 670

 Score = 31.6 bits (70), Expect = 8.2
 Identities = 20/71 (28%), Positives = 35/71 (49%)
 Frame = -2

Query: 988 YPHQFQRICGPHLSFSWAPFHAS*NWLDPLSQTRKYQHRSHILQHNAPCNLNPHQTVAYH 809
           +P  F    G H S  W+    S + ++         + SHI Q ++ C+L+PH+ ++Y 
Sbjct: 210 FPSSFFMQDGHHSSDPWS----SSSGMNQPGYGGMLGNSSHIPQSSSYCSLHPHERLSYP 265

Query: 808 VHHSSKRNLTL 776
            H S+  N +L
Sbjct: 266 SHSSADINSSL 276


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 225,700,094
Number of extensions: 4813884
Number of successful extensions: 15112
Number of sequences better than 10.0: 6
Number of HSP's gapped: 15082
Number of HSP's successfully gapped: 6
Length of query: 459
Length of database: 100,686,439
Length adjustment: 117
Effective length of query: 342
Effective length of database: 68,593,924
Effective search space: 23459122008
Effective search space used: 23459122008
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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