>Q10021:RSP5_CAEEL Probable splicing factor, arginine/serine-rich 5 - Caenorhabditis|
           elegans
          Length = 208
 Score = 33.1 bits (74), Expect = 3.6
 Identities = 25/88 (28%), Positives = 32/88 (36%)
 Frame = -2

Query: 264 LEQNRRKPRSIDGSLPEVARRRAGSPASAQETKPARR*IKRDSKRIEI*WIRGREQPRRR 85
           +E  R KPR  D       RRR+ SP     T P RR   RD KR      R   + R  
Sbjct: 69  VEMARGKPRGNDRHGSRSPRRRSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSRSRSP 128

Query: 84  EEATQAIDTGGAADPNESSNREGGGQRA 1
              ++      +  P     RE    R+
Sbjct: 129 VRESRRRSESRSPSPKRDLKREASRSRS 156

>O75683:SURF6_HUMAN Surfeit locus protein 6 - Homo sapiens (Human)|
          Length = 361

 Score = 32.0 bits (71), Expect = 8.0
 Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
 Frame = -2

Query: 399 TGESRPTVSKSEIAEEGRQVTEPRNRSDRSSTGN*PCFG-PLITQELEQNRRKPRSIDGS 223
           +G  RP  +K E A        P   +D  +T     F   ++ Q L +  ++ R   GS
Sbjct: 78  SGARRPEAAKEEAAWASSSAGNP---ADGLATEPESVFALDVLRQRLHEKIQEARG-QGS 133

Query: 222 LPEVARRRAGSPASAQETKPARR*IKRDSKRIEI*WIRGREQPRRREEATQAIDT----- 58
             E+      SPA+ ++ +  RR  +RD K+ +   +R +E+ R+ EEAT+A +      
Sbjct: 134 AKEL------SPAALEKRR--RRKQERDRKKRKRKELRAKEKARKAEEATEAQEVVEATP 185

Query: 57  -GGAADPNE 34
            G   +P E
Sbjct: 186 EGACTEPRE 194

>P54938:NFM_RABIT Neurofilament medium polypeptide - Oryctolagus cuniculus (Rabbit)|
          Length = 644

 Score = 32.0 bits (71), Expect = 8.0
 Identities = 26/131 (19%), Positives = 57/131 (43%)
 Frame = -2

Query: 393 ESRPTVSKSEIAEEGRQVTEPRNRSDRSSTGN*PCFGPLITQELEQNRRKPRSIDGSLPE 214
           ++  T  K E  EE  +V E + ++ + S            +++E+   KP+ +     E
Sbjct: 414 KAEATAGKGEQKEEEEKVEEEKKKAAKESPKE---------EKVEKKEEKPKDVPKKKAE 464

Query: 213 VARRRAGSPASAQETKPARR*IKRDSKRIEI*WIRGREQPRRREEATQAIDTGGAADPNE 34
              +   +  +A  TKP +  +++++K        G +  ++ +E  +A + GG    +E
Sbjct: 465 SPVKEEAAEEAATITKPTKVGLEKETK-------EGEKPLQQEKEKEKAGEEGG----SE 513

Query: 33  SSNREGGGQRA 1
               + G +RA
Sbjct: 514 EEGSDQGSKRA 524

>Q7RX84:CWC22_NEUCR Pre-mRNA-splicing factor cwc-22 - Neurospora crassa|
          Length = 1010

 Score = 32.0 bits (71), Expect = 8.0
 Identities = 37/147 (25%), Positives = 51/147 (34%)
 Frame = -2

Query: 450 TDDDGTRDERAGSGAGRTGESRPTVSKSEIAEEGRQVTEPRNRSDRSSTGN*PCFGPLIT 271
           T     RDE      G    S P+   S     G +   P  R DRS          L  
Sbjct: 24  TQSPSPRDEDGSRSPGERTPSPPSRDPSPYRSPGERTPSPSPRRDRS----------LSP 73

Query: 270 QELEQNRRKPRSIDGSLPEVARRRAGSPASAQETKPARR*IKRDSKRIEI*WIRGREQPR 91
           ++   +  + RS        +RR   SP S ++  PARR + R S        R R  P 
Sbjct: 74  RDQPHSHPRSRSPTPRSQSPSRRSVRSP-SPRQGSPARR-VDRSSSP------RARSPPP 125

Query: 90  RREEATQAIDTGGAADPNESSNREGGG 10
           RR   +  +       P    +R+ GG
Sbjct: 126 RRHSRSPPL----RGQPPPPRHRDAGG 148


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 276,425,422
Number of extensions: 5840641
Number of successful extensions: 13684
Number of sequences better than 10.0: 4
Number of HSP's gapped: 13674
Number of HSP's successfully gapped: 4
Length of query: 558
Length of database: 100,686,439
Length adjustment: 118
Effective length of query: 440
Effective length of database: 68,319,629
Effective search space: 30060636760
Effective search space used: 30060636760
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)