ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf155k19 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK070158:Os10g0452800 | 552 | e-157 | 2 | Os01g0713800:Os01g0713800 | 199 | 6e-51 | 3 | Os01g0713700:Os01g0713700 | 99 | 1e-20 | 4 | AK071287:Os03g0115200 | 35 | 0.11 | 5 | AK104046:Os05g0481500 | 31 | 2.0 | 6 | AK072560:Os05g0481500 | 31 | 2.0 | 7 | AK069634:Os07g0227400 | 31 | 2.6 | 8 | AK063274:Os01g0818300 | 31 | 2.6 | 9 | AK065405:Os03g0815700 | 30 | 4.5 | 10 | AK071403:Os03g0612600 | 30 | 5.9 | 11 | AK110349: | 29 | 7.7 | 12 | AK119275:Os02g0580800 | 29 | 7.7 | 13 | AK068477:Os02g0580800 | 29 | 7.7 | 14 | Os11g0212000:Os11g0212000 | 29 | 7.7 |
|---|
>AK070158:Os10g0452800 | Length = 395 Score = 552 bits (1422), Expect = e-157 Identities = 276/357 (77%), Positives = 301/357 (84%) Frame = +1 Query: 163 RRKGKHEKEKPWDDDPTIDRWTVEKFDPSWNEGGLLEVSSFSTLFPQYREKYLQETWPIV 342 R KGKH+K KPWDDDP ID W +EKFDPSWNEGG+LEVSSFSTLFPQYREKYLQE WPIV Sbjct: 25 RHKGKHDKPKPWDDDPNIDHWKIEKFDPSWNEGGMLEVSSFSTLFPQYREKYLQEAWPIV 84 Query: 343 KGALKEFGVSCELNLVEGSMTVTTTRKTKDPYIILKARDLIKLLSRSVPAPQAIKVLNDE 522 KGALKEFGV+CELNLVEGSMTV+TTRKT+DPYII+KA++LIKLLSRSVPAPQAIK+LNDE Sbjct: 85 KGALKEFGVACELNLVEGSMTVSTTRKTRDPYIIVKAKELIKLLSRSVPAPQAIKILNDE 144 Query: 523 MNCDIIKIGSIIRNKERFVKRRERLLGPNLSTLKAIEILTGCYILVQGNTVAAMGSFKGL 702 M+CDIIKIGSIIRNKERFVKRRERLLGPNLSTLKAIEILTGCYILVQGNTVAAMGS+KGL Sbjct: 145 MSCDIIKIGSIIRNKERFVKRRERLLGPNLSTLKAIEILTGCYILVQGNTVAAMGSWKGL 204 Query: 703 KQVRRIVEDCIKNIKHPVYHIKELLIKRELAKNPALATESWDRFLPXXXXXXXXXXXXXX 882 KQVRR+VEDCIKNIKHPVYHIKELLIKRELAKNPALA ESWDRFLP Sbjct: 205 KQVRRVVEDCIKNIKHPVYHIKELLIKRELAKNPALANESWDRFLPKFKKKNVKQKKPIT 264 Query: 883 XXXXQYTPFPPPQQPSKIDRELESGEYFLSDKVKAAXXXXXXXXXXXXXXXXXXXXXXAA 1062 YTPFPPPQQPSKID ELESGEYF+SDK K+A AA Sbjct: 265 KEKKPYTPFPPPQQPSKIDLELESGEYFMSDKKKSAKKWQEKLEKQSEKAEENKRKREAA 324 Query: 1063 FVPPKENTAGLSESAKSSNDNNEIADITKSLKKKAKKFRNSEAEGNVKIESYVASNE 1233 FVPPKE+TA ESAKS+++N+EIAD+ KSLKKKAK+FR SEA+ NV++ESYVASNE Sbjct: 325 FVPPKEDTATPYESAKSTSNNDEIADMAKSLKKKAKEFRKSEAQENVRLESYVASNE 381
>Os01g0713800:Os01g0713800 | Length = 229 Score = 199 bits (505), Expect = 6e-51 Identities = 120/226 (53%), Positives = 130/226 (57%) Frame = +1 Query: 523 MNCDIIKIGSIIRNKERFVKRRERLLGPNLSTLKAIEILTGCYILVQGNTVAAMGSFKGL 702 M+C IIKIGSIIRNKERFVKRR RLLGPNLSTLKAIEILTGCYILVQ Sbjct: 1 MSCAIIKIGSIIRNKERFVKRRGRLLGPNLSTLKAIEILTGCYILVQ------------- 47 Query: 703 KQVRRIVEDCIKNIKHPVYHIKELLIKRELAKNPALATESWDRFLPXXXXXXXXXXXXXX 882 ELLIKREL KNPALA ESWD+FLP Sbjct: 48 ----------------------ELLIKRELVKNPALAHESWDKFLPKFKKKNVKQKKPLT 85 Query: 883 XXXXQYTPFPPPQQPSKIDRELESGEYFLSDKVKAAXXXXXXXXXXXXXXXXXXXXXXAA 1062 QYTPFPPPQQPSKID ELESGE F+SDK K+A AA Sbjct: 86 KEKKQYTPFPPPQQPSKIDLELESGECFMSDKKKSAKEWQEKLEKQSQKAEENKRKREAA 145 Query: 1063 FVPPKENTAGLSESAKSSNDNNEIADITKSLKKKAKKFRNSEAEGN 1200 FV P E+ A ESAKS +N EIAD+ KSLKKKAK+ R +E + N Sbjct: 146 FVHPNEDIATPYESAKSIINNGEIADMAKSLKKKAKELRKNEEQEN 191
>Os01g0713700:Os01g0713700 | Length = 70 Score = 98.6 bits (244), Expect = 1e-20 Identities = 40/55 (72%), Positives = 48/55 (87%) Frame = +1 Query: 148 EGKNWRRKGKHEKEKPWDDDPTIDRWTVEKFDPSWNEGGLLEVSSFSTLFPQYRE 312 EG+ R KGKH+K KPWDDDP ID W +E+FDPSWNEGG+LEV+SFSTLFPQ+R+ Sbjct: 15 EGRKPRHKGKHDKPKPWDDDPNIDHWKIEEFDPSWNEGGMLEVTSFSTLFPQWRD 69
>AK071287:Os03g0115200 | Length = 227 Score = 35.4 bits (80), Expect = 0.11 Identities = 33/142 (23%), Positives = 57/142 (40%), Gaps = 3/142 (2%) Frame = +1 Query: 298 PQYREKYLQETW-PIVKGALKEFGVSCELNLVEGSMTVTTTRKTKDPYIILKARDLIKLL 474 PQ+R L++ W I + + +NL + + T + T D + K D + Sbjct: 56 PQHRFAPLKKAWMDIYTPVYEHMKIDIRMNLKARRVELKTRQDTPDVSNLQKCADFVHAF 115 Query: 475 SRSVPAPQAIKVLN-DEMNCDIIKIGSIIRNKERFVKRR-ERLLGPNLSTLKAIEILTGC 648 A+ +L D++ D +I + + + R RL G T AIE T Sbjct: 116 MLGFDIADAVALLRLDDLYVDSFEIKDVKTLRGEHLSRAIGRLSGKGGKTKYAIENSTRT 175 Query: 649 YILVQGNTVAAMGSFKGLKQVR 714 I++ + +GSF +K R Sbjct: 176 RIVIADTKIHILGSFVNIKVAR 197
>AK104046:Os05g0481500 | Length = 282 Score = 31.2 bits (69), Expect = 2.0 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = +1 Query: 592 RLLGPNLSTLKAIEILTGCYILVQG 666 RLLGP ++LK IE TGC + ++G Sbjct: 156 RLLGPRGNSLKRIEASTGCRVFIRG 180
>AK072560:Os05g0481500 | Length = 282 Score = 31.2 bits (69), Expect = 2.0 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = +1 Query: 592 RLLGPNLSTLKAIEILTGCYILVQG 666 RLLGP ++LK IE TGC + ++G Sbjct: 156 RLLGPRGNSLKRIEASTGCRVFIRG 180
>AK069634:Os07g0227400 | Length = 286 Score = 30.8 bits (68), Expect = 2.6 Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%) Frame = +1 Query: 592 RLLGPNLSTLKAIEILTGCYILVQGNTVAAMGSFKGLKQVRRIV-EDCIKNIKHPVYHIK 768 R+LGP ++LK +E TGC + ++G GS K + ++ + +++ P++ Sbjct: 158 RILGPRGNSLKRVEASTGCRVFIRGK-----GSIKDADKEEKLKGKPGYEHLNDPLH--- 209 Query: 769 ELLIKRELAKN 801 +LI+ EL N Sbjct: 210 -ILIEAELPAN 219
>AK063274:Os01g0818300 | Length = 283 Score = 30.8 bits (68), Expect = 2.6 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = +1 Query: 592 RLLGPNLSTLKAIEILTGCYILVQG 666 RLLGP ++LK +E TGC + ++G Sbjct: 156 RLLGPRGNSLKRVEASTGCRVFIRG 180
>AK065405:Os03g0815700 | Length = 281 Score = 30.0 bits (66), Expect = 4.5 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = +1 Query: 592 RLLGPNLSTLKAIEILTGCYILVQG 666 R+LGP ++LK +E TGC + ++G Sbjct: 153 RILGPRGNSLKRVEASTGCRVFIRG 177
>AK071403:Os03g0612600 | Length = 175 Score = 29.6 bits (65), Expect = 5.9 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = +3 Query: 261 RPAGSQLLLHPLPPVPREVSAGDVADREGRAEGVWSLMRAQSGGGIHDGYHHQE 422 R A S H + +PRE + A RE R+ V +++ A +G G +G H++ Sbjct: 20 RRAASASYHHTIQALPRETAGPRAAARERRSGRVPAVLLALAGAGPGEGVAHRK 73
>AK110349: | Length = 639 Score = 29.3 bits (64), Expect = 7.7 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%) Frame = +3 Query: 636 FNWLLHLSSGKYCC--CHGFL*GTETSPEDCRGLHKEHKASS 755 F W++HLS K C C FL + +P C + H S+ Sbjct: 66 FPWIVHLSHDKVVCHHCAVFLDSSSNAPRTCDRCKRAHYCSA 107
>AK119275:Os02g0580800 | Length = 318 Score = 29.3 bits (64), Expect = 7.7 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Frame = +3 Query: 225 DGGEVRPLLERGRPAG----SQLLLHPLPPVPREVSAGDVADREGRAE 356 DG EV+ ++ G AG S +L P PP+PR ++ REG E Sbjct: 16 DGKEVKAVVSPGAAAGANSGSPILASPHPPLPRR--RAEIRTREGDPE 61
>AK068477:Os02g0580800 | Length = 318 Score = 29.3 bits (64), Expect = 7.7 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Frame = +3 Query: 225 DGGEVRPLLERGRPAG----SQLLLHPLPPVPREVSAGDVADREGRAE 356 DG EV+ ++ G AG S +L P PP+PR ++ REG E Sbjct: 16 DGKEVKAVVSPGAAAGANSGSPILASPHPPLPRR--RAEIRTREGDPE 61
>Os11g0212000:Os11g0212000 | Length = 1155 Score = 29.3 bits (64), Expect = 7.7 Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 18/205 (8%) Frame = +1 Query: 214 IDRWTVEKFDPSWNEGGLLEVSSFSTLFPQYREKYLQ----------------ETWPIVK 345 +D W K + WNE L + SS + + Y++ + IVK Sbjct: 255 LDEWESVKDNDIWNESTLEDASSPHHVLASLKLSYVKMQPSLKLCFGYCAIFPKGQKIVK 314 Query: 346 GALKEFGVSCELNLVEGSMTVTTTRKTKDPYIILKARDLIKLLSRSVPAPQAIKVLNDEM 525 L +S LN ++ S T D +I+L DL+ L+RS V+ DE+ Sbjct: 315 DDLIHQWIS--LNFIKPSKTAGDYH---DNFILLTMHDLVHDLARS--------VMFDEI 361 Query: 526 NCDIIKIGSIIRNKERFVKRRERLLGPNLSTLKAIEILTGCYILVQGNTVAAMGSFKGLK 705 D ++ + RN R+ R E L TL+A+ + GC I + SF K Sbjct: 362 QNDGLQGDTSGRNC-RYALRTE--FSKPLETLRALRFM-GCSI----DNRLHNDSFSSAK 413 Query: 706 QVRRI-VEDC-IKNIKHPVYHIKEL 774 +R + + +C I+ + + +K+L Sbjct: 414 YLRLLDLSECSIQRLPDSIGQLKQL 438 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 34,669,653 Number of extensions: 698680 Number of successful extensions: 2303 Number of sequences better than 10.0: 14 Number of HSP's gapped: 2294 Number of HSP's successfully gapped: 15 Length of query: 502 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 397 Effective length of database: 11,195,550 Effective search space: 4444633350 Effective search space used: 4444633350 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
