ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf155k19 |
|---|---|
| Clone Library Name | barley_pub |
>O74777:MIS3_SCHPO Ribosomal RNA assembly protein mis3 - Schizosaccharomyces pombe| (Fission yeast) Length = 327 Score = 344 bits (882), Expect = 6e-94 Identities = 176/305 (57%), Positives = 215/305 (70%), Gaps = 1/305 (0%) Frame = +1 Query: 175 KHEKEKPWDDDPTIDRWTVEKFDPSWNEGGLLEVSSFSTLFPQYREKYLQETWPIVKGAL 354 ++ ++KPWD D ID W +E F ++ LE SSF+TLFP+YREKYL+E WP V AL Sbjct: 19 RYRRDKPWDTDD-IDHWKIEPFTKDDSKESFLEESSFATLFPKYREKYLREVWPHVTRAL 77 Query: 355 KEFGVSCELNLVEGSMTVTTTRKTKDPYIILKARDLIKLLSRSVPAPQAIKVLNDEMNCD 534 +FG++C L+LVEGSMTV TTRKT DPY IL ARDLIKLL+RSVP PQA+K++ D + CD Sbjct: 78 DKFGITCVLDLVEGSMTVKTTRKTFDPYSILDARDLIKLLARSVPFPQAVKIMQDGVACD 137 Query: 535 IIKIGSIIRNKERFVKRRERLLGPNLSTLKAIEILTGCYILVQGNTVAAMGSFKGLKQVR 714 IIKIG+I+RNKERFVKRR+RL+G N TLKA+E+LT CYILVQG TVA MG +KGLK+VR Sbjct: 138 IIKIGNILRNKERFVKRRQRLIGTNGQTLKALELLTQCYILVQGTTVAVMGGYKGLKEVR 197 Query: 715 RIVEDCIKNIKHPVYHIKELLIKRELAKNPALATESWDRFLP-XXXXXXXXXXXXXXXXX 891 RIVEDC+ NI HP+YHIKEL+IKRELAK+P LA ESWDRFLP Sbjct: 198 RIVEDCMHNI-HPIYHIKELMIKRELAKDPTLANESWDRFLPQFKKRNVARRKPAKIRET 256 Query: 892 XQYTPFPPPQQPSKIDRELESGEYFLSDKVKAAXXXXXXXXXXXXXXXXXXXXXXAAFVP 1071 +YTPFPP Q PSK+D E+ESGEYFL + K AF+P Sbjct: 257 KEYTPFPPAQPPSKLDLEIESGEYFLKKEEKERKKRAEKKEQQKEKKKEKEKERMKAFIP 316 Query: 1072 PKENT 1086 P+E++ Sbjct: 317 PEESS 321
>P25586:KRR1_YEAST Ribosomal RNA assembly protein KRR1 - Saccharomyces cerevisiae| (Baker's yeast) Length = 316 Score = 331 bits (849), Expect = 4e-90 Identities = 169/274 (61%), Positives = 202/274 (73%), Gaps = 5/274 (1%) Frame = +1 Query: 178 HEKEKPWDDDPTIDRWTVEKFDPSWNEGG--LLEVSSFSTLFPQYREKYLQETWPIVKGA 351 H ++KPWD D ID+W +E+F N G E SSF TLFP+YRE YL+ W V A Sbjct: 5 HNRDKPWDTDD-IDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRA 63 Query: 352 LKEFGVSCELNLVEGSMTVTTTRKTKDPYIILKARDLIKLLSRSVPAPQAIKVLNDEMNC 531 L + ++C L+LVEGSMTV TTRKT DP IILKARDLIKLL+RSVP PQA+K+L D+M C Sbjct: 64 LDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMAC 123 Query: 532 DIIKIGSIIRNKERFVKRRERLLGPNLSTLKAIEILTGCYILVQGNTVAAMGSFKGLKQV 711 D+IKIG+ + NKERFVKRR+RL+GPN +TLKA+E+LT CYILVQGNTV+AMG FKGLK+V Sbjct: 124 DVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEV 183 Query: 712 RRIVEDCIKNIKHPVYHIKELLIKRELAKNPALATESWDRFLPXXXXXXXXXXXXXXXXX 891 RR+VEDC+KNI HP+YHIKEL+IKRELAK P LA E W RFLP Sbjct: 184 RRVVEDCMKNI-HPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRN 242 Query: 892 XQ---YTPFPPPQQPSKIDRELESGEYFLSDKVK 984 + YTPFPP Q P K+D E+ESGEYFLS + K Sbjct: 243 VEKKVYTPFPPAQLPRKVDLEIESGEYFLSKREK 276
>Q13601:KRR1_HUMAN KRR1 small subunit processome component homolog - Homo sapiens| (Human) Length = 381 Score = 313 bits (801), Expect = 2e-84 Identities = 170/345 (49%), Positives = 221/345 (64%), Gaps = 7/345 (2%) Frame = +1 Query: 175 KHEKEKPWDDDPTI-----DRWTVEKFDPSWNEGGLLEVSSFSTLFPQYREKYLQETWPI 339 +++K KP + D + D W F N GLLE SSF+TLFP+YRE YL+E WP+ Sbjct: 19 RNQKPKPENQDESELLTVPDGWKEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPL 78 Query: 340 VKGALKEFGVSCELNLVEGSMTVTTTRKTKDPYIILKARDLIKLLSRSVPAPQAIKVLND 519 V+ AL E V+ L+L+EGSMTV TT+KT DPYII++ARDLIKLL+RSV QA+++L D Sbjct: 79 VQKALNEHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQD 138 Query: 520 EMNCDIIKIGSIIRNKERFVKRRERLLGPNLSTLKAIEILTGCYILVQGNTVAAMGSFKG 699 ++ CDIIKIGS++RNKERFVKRR+RL+GP STLKA+E+LT CYI+VQGNTV+A+G F G Sbjct: 139 DVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSG 198 Query: 700 LKQVRRIVEDCIKNIKHPVYHIKELLIKRELAKNPALATESWDRFLP--XXXXXXXXXXX 873 LK+VR++V D +KNI HP+Y+IK L+IKRELAK+ L ++SW+RFLP Sbjct: 199 LKEVRKVVLDTMKNI-HPIYNIKSLMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKEP 257 Query: 874 XXXXXXXQYTPFPPPQQPSKIDRELESGEYFLSDKVKAAXXXXXXXXXXXXXXXXXXXXX 1053 +YTPFPPPQ S+ID+EL SGEYFL K Sbjct: 258 KKKTVKKEYTPFPPPQPESQIDKELASGEYFLKANQKKRQKMEAIKAKQAEAISKRQEER 317 Query: 1054 XAAFVPPKENTAGLSESAKSSNDNNEIADITKSLKKKAKKFRNSE 1188 AF+PPKE K + E S+K+K KK +N + Sbjct: 318 NKAFIPPKEKPI-----VKPKEASTETKIDVASIKEKVKKAKNKK 357
>Q8BGA5:KRR1_MOUSE KRR1 small subunit processome component homolog - Mus musculus| (Mouse) Length = 380 Score = 310 bits (795), Expect = 8e-84 Identities = 169/329 (51%), Positives = 216/329 (65%), Gaps = 3/329 (0%) Frame = +1 Query: 217 DRWTVEKFDPSWNEGGLLEVSSFSTLFPQYREKYLQETWPIVKGALKEFGVSCELNLVEG 396 D W F N GLLE SSF+TLFP+YRE YL+E WP+V+ AL E V L+L+EG Sbjct: 37 DGWKEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVKATLDLIEG 96 Query: 397 SMTVTTTRKTKDPYIILKARDLIKLLSRSVPAPQAIKVLNDEMNCDIIKIGSIIRNKERF 576 SMTV TT+KT DPYII++ARDLIKLL+RSV QA+++L D++ CDIIKIGS++RNKERF Sbjct: 97 SMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGSLVRNKERF 156 Query: 577 VKRRERLLGPNLSTLKAIEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCIKNIKHPV 756 VKRR+RL+GP STLKA+E+LT CY++VQGNTV+A+G F GLK+VR++V D +KNI HP+ Sbjct: 157 VKRRQRLIGPKGSTLKALELLTNCYVMVQGNTVSAIGPFSGLKEVRKVVLDTMKNI-HPI 215 Query: 757 YHIKELLIKRELAKNPALATESWDRFLP--XXXXXXXXXXXXXXXXXXQYTPFPPPQQPS 930 Y+IK L+IKRELAK+ L ++SW+RFLP +YTPFPPPQ S Sbjct: 216 YNIKTLMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKEPKKKSVKKEYTPFPPPQPES 275 Query: 931 KIDRELESGEYFLSDKVKAAXXXXXXXXXXXXXXXXXXXXXXAAFVPPKENTAGLSESAK 1110 +ID+EL SGEYFL K AF+PPKE A + A Sbjct: 276 QIDKELASGEYFLKASQKKRQKMEAIKAKQAEALTKRQEERNKAFIPPKEKPAVKPKEA- 334 Query: 1111 SSNDNNEIADITKSLKK-KAKKFRNSEAE 1194 S+ ++A I + +KK K KK AE Sbjct: 335 STETKIDVAAIKEKVKKAKTKKLGALTAE 363
>Q57885:Y443_METJA KH domain-containing protein MJ0443 - Methanococcus jannaschii| Length = 227 Score = 73.9 bits (180), Expect = 2e-12 Identities = 45/159 (28%), Positives = 81/159 (50%) Frame = +1 Query: 355 KEFGVSCELNLVEGSMTVTTTRKTKDPYIILKARDLIKLLSRSVPAPQAIKVLNDEMNCD 534 KE GV E++ +G++T+ T K KDP + KARD+++ + R A+K+++DE + Sbjct: 42 KELGVKLEID-ADGTVTIYGTDKQKDPLAVWKARDIVRAIGRGFNPEIALKLVSDEYVLE 100 Query: 535 IIKIGSIIRNKERFVKRRERLLGPNLSTLKAIEILTGCYILVQGNTVAAMGSFKGLKQVR 714 +I I + + + R++G + + IE LTG + V GNTVA +G + ++ + Sbjct: 101 VIDIEDYASSDNSIRRLKGRVIGKEGKSRRYIESLTGANVSVYGNTVAIVGEHEPVQIAK 160 Query: 715 RIVEDCIKNIKHPVYHIKELLIKRELAKNPALATESWDR 831 VE ++ H + ++RE K E W + Sbjct: 161 EAVEMLLRGASHAKTY---KFLERERQKIKRARFELWKK 196
>Q4WNG7:PNO1_ASPFU Pre-rRNA-processing protein pno1 - Aspergillus fumigatus (Sartorya| fumigata) Length = 252 Score = 48.1 bits (113), Expect = 9e-05 Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 4/176 (2%) Frame = +1 Query: 187 EKPWDDDPTIDRWTVEKFDPSWNEGGLLEVSSFSTLFPQYREKYLQETWPIVKGALKE-F 363 E D ID + F P + G +L V + P +R L+ WP + L E Sbjct: 43 ESAQHSDMRIDEESRPVFTPITDAGTVLRVETRKVPVPPHRMTPLKANWPKIYPPLVEHL 102 Query: 364 GVSCELNLVEGSMTVTTTRKTKDPYIILKARDLIKLLSRSVPAPQAIKVLN-DEMNCDII 540 + +N+ ++ + T++ T D + K D +K + AI +L D++ Sbjct: 103 KLQVRMNIKNRAVELRTSKFTTDTGALQKGEDFVKAFTLGFDVDDAIALLRLDDLYIRSF 162 Query: 541 KIGSI--IRNKERFVKRRERLLGPNLSTLKAIEILTGCYILVQGNTVAAMGSFKGL 702 +I + N E + R+ G + T AIE + +++QG V +G F+ L Sbjct: 163 EIRDVKASLNGEHLSRAIGRIAGKDGKTKFAIENASRTRVVLQGTKVTILGRFRDL 218
>Q1DQZ5:PNO1_COCIM Pre-rRNA-processing protein PNO1 - Coccidioides immitis| Length = 255 Score = 43.9 bits (102), Expect = 0.002 Identities = 38/182 (20%), Positives = 73/182 (40%), Gaps = 3/182 (1%) Frame = +1 Query: 199 DDDPTIDRWTVEKFDPSWNEGGLLEVSSFSTLFPQYREKYLQETWPIVKGALKE-FGVSC 375 D D +D F P G + + P +R L+ WP + L E + Sbjct: 51 DTDMHVDEEGRPLFTPITATDGAYRIENRKVPVPPHRMSPLKAAWPKIYPPLVEHLKLQV 110 Query: 376 ELNLVEGSMTVTTTRKTKDPYIILKARDLIKLLSRSVPAPQAIKVLN-DEMNCDIIKIGS 552 +N+ ++ + T++ T D + K D IK + AI +L D++ + +I Sbjct: 111 RMNIKSKAVELRTSKNTTDTGALQKGEDFIKAFTLGFDVDDAIALLRLDDLYIETFEIKD 170 Query: 553 I-IRNKERFVKRRERLLGPNLSTLKAIEILTGCYILVQGNTVAAMGSFKGLKQVRRIVED 729 + N E + R+ G + T AIE + +++ + +G F+ ++ R + Sbjct: 171 VKPLNGEHLGRAIGRIAGKDGKTKFAIENASRTRVVLADQKIHILGGFRNIRIAREAIVS 230 Query: 730 CI 735 I Sbjct: 231 LI 232
>Q99216:PNO1_YEAST Pre-rRNA-processing protein PNO1 - Saccharomyces cerevisiae| (Baker's yeast) Length = 274 Score = 42.4 bits (98), Expect = 0.005 Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 4/200 (2%) Frame = +1 Query: 148 EGKNWRRKGKHEKEKPWDDDPTIDRWTVEKFDPSWNEGGLLEVSSFSTLFPQYREKYLQE 327 EG+ RK HE + DD R+T S +G ++ S + P +R L+ Sbjct: 57 EGEEGSRK-THESKTVVVDDQGKPRFT----SASKTQGNKIKFESRKIMVPPHRMTPLRN 111 Query: 328 TWPIVKGALKE-FGVSCELNLVEGSMTVTTTRK-TKDPYIILKARDLIKLLSRSVPAPQA 501 +W + L E + +NL S+ + T K T DP + K D IK + + Sbjct: 112 SWTKIYPPLVEHLKLQVRMNLKTKSVELRTNPKFTTDPGALQKGADFIKAFTLGFDLDDS 171 Query: 502 IKVLN-DEMNCDIIKIGSI-IRNKERFVKRRERLLGPNLSTLKAIEILTGCYILVQGNTV 675 I +L D++ + ++ + + + R+ G + T AIE T I++ + + Sbjct: 172 IALLRLDDLYIETFEVKDVKTLTGDHLSRAIGRIAGKDGKTKFAIENATRTRIVLADSKI 231 Query: 676 AAMGSFKGLKQVRRIVEDCI 735 +G F ++ R V I Sbjct: 232 HILGGFTHIRMARESVVSLI 251
>Q6BJ75:PNO1_DEBHA Pre-rRNA-processing protein PNO1 - Debaryomyces hansenii (Yeast)| (Torulaspora hansenii) Length = 255 Score = 42.4 bits (98), Expect = 0.005 Identities = 38/186 (20%), Positives = 76/186 (40%), Gaps = 3/186 (1%) Frame = +1 Query: 187 EKPWDDDPTIDRWTVEKFDPSWNEGGLLEVSSFSTLFPQYREKYLQETWPIVKGALKE-F 363 +K + +D KF + G +++ S P +R L+ TW + L + Sbjct: 47 KKKESSEMVLDESGKPKFSAASKSGMKVKLESRKVPVPPHRMTPLKNTWTKIYPPLVDHL 106 Query: 364 GVSCELNLVEGSMTVTTTRKTKDPYIILKARDLIKLLSRSVPAPQAIKVLN-DEMNCDII 540 + +NL ++ + T + T D + K D +K + AI +L D++ + Sbjct: 107 KLQVRMNLKTKTIEMKTNKNTVDQGALQKGADFVKAFTLGFDVDDAIALLRLDDLYIETF 166 Query: 541 KIGSI-IRNKERFVKRRERLLGPNLSTLKAIEILTGCYILVQGNTVAAMGSFKGLKQVRR 717 ++ + N + + R+ G + T AIE T I++ + + +G F ++ R Sbjct: 167 EVKDVKTLNGDHLSRAIGRIAGKDGKTKFAIENATRTRIVLADSKIHILGGFTHIRMARE 226 Query: 718 IVEDCI 735 V I Sbjct: 227 AVVSLI 232
>Q0UWT7:PNO1_PHANO Pre-rRNA-processing protein PNO1 - Phaeosphaeria nodorum (Septoria| nodorum) Length = 262 Score = 42.0 bits (97), Expect = 0.007 Identities = 39/182 (21%), Positives = 72/182 (39%), Gaps = 3/182 (1%) Frame = +1 Query: 199 DDDPTIDRWTVEKFDPSWNEGGLLEVSSFSTLFPQYREKYLQETWPIVKGALKE-FGVSC 375 DD P D KF P+ + P +R L+ WP + L E + Sbjct: 58 DDMPMTDESGRPKFAPAKSIPLAFRHEQRKVPIPPHRMTPLKTAWPKIYPPLVEHLKLQV 117 Query: 376 ELNLVEGSMTVTTTRKTKDPYIILKARDLIKLLSRSVPAPQAIKVLN-DEMNCDIIKIGS 552 +N+ S+ + T++ T D + K D +K + AI +L D++ + +I Sbjct: 118 RMNIKTKSVELRTSKSTTDTGALQKGEDFVKAFTLGFDVDDAIALLRLDDLYIETFEIKD 177 Query: 553 I-IRNKERFVKRRERLLGPNLSTLKAIEILTGCYILVQGNTVAAMGSFKGLKQVRRIVED 729 + E + R+ G + T AIE + +++ + + +G FK + R + Sbjct: 178 VKTLQGEHMGRAIGRIAGKDGKTKFAIENASRTRVVLADSKIHILGGFKNIHVAREAIVS 237 Query: 730 CI 735 I Sbjct: 238 LI 239
>Q4IN63:PNO1_GIBZE Pre-rRNA-processing protein PNO1 - Gibberella zeae (Fusarium| graminearum) Length = 255 Score = 39.7 bits (91), Expect = 0.034 Identities = 36/181 (19%), Positives = 77/181 (42%), Gaps = 3/181 (1%) Frame = +1 Query: 202 DDPTIDRWTVEKFDPSWNEGGLLEVSSFSTLFPQYREKYLQETWPIVKGALKE-FGVSCE 378 +D ID +F P+ + + V + P +R L+++W + L E + C Sbjct: 52 NDMQIDEEGRPRFAPARDIDPVTRVETRKIPIPPHRMTPLKQSWTSIYPPLVEHLKLQCR 111 Query: 379 LNLVEGSMTVTTTRKTKDPYIILKARDLIKLLSRSVPAPQAIKVLN-DEMNCDIIKIGSI 555 +N+ ++ + +++ T + + K D +K + AI +L D++ +I + Sbjct: 112 MNIKRKTVELRSSKHTTESGALQKGEDFVKAFTLGFDVDDAIALLRLDDLYIQSFEIKDV 171 Query: 556 -IRNKERFVKRRERLLGPNLSTLKAIEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDC 732 + + + R+ G + T AIE + I++ + + +G FK + R V Sbjct: 172 RTMHGDSQARAIGRIAGKDGKTKFAIENASRTRIVLADSKIHILGGFKNIHLARESVVSL 231 Query: 733 I 735 I Sbjct: 232 I 232
>Q5ACM4:PNO1_CANAL Pre-rRNA-processing protein PNO1 - Candida albicans (Yeast)| Length = 276 Score = 36.6 bits (83), Expect = 0.29 Identities = 35/170 (20%), Positives = 68/170 (40%), Gaps = 3/170 (1%) Frame = +1 Query: 235 KFDPSWNEGGLLEVSSFSTLFPQYREKYLQETWPIVKGALKE-FGVSCELNLVEGSMTVT 411 KF + +++ S P +R L+ W + L E + +NL ++ + Sbjct: 84 KFSAASKSNMKVKLESRKVAVPPHRMTPLKNVWSKIYPPLVEHLKLQVRMNLKTKTVELR 143 Query: 412 TTRKTKDPYIILKARDLIKLLSRSVPAPQAIKVLN-DEMNCDIIKIGSI-IRNKERFVKR 585 T + T D + K D +K + AI +L D++ + +I + + + Sbjct: 144 TNKYTTDVGALQKGADFVKAFTLGFDVDDAIALLRLDDLYIETFEIKDVKTLTGDHLSRA 203 Query: 586 RERLLGPNLSTLKAIEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCI 735 R+ G + T AIE T I++ + + +G F ++ R V I Sbjct: 204 IGRIAGKDGKTKFAIENATRTRIVLADSKIHILGGFTHIRMAREAVVSLI 253
>Q6C7G0:PNO1_YARLI Pre-rRNA-processing protein PNO1 - Yarrowia lipolytica (Candida| lipolytica) Length = 258 Score = 35.8 bits (81), Expect = 0.49 Identities = 35/187 (18%), Positives = 77/187 (41%), Gaps = 3/187 (1%) Frame = +1 Query: 184 KEKPWDDDPTIDRWTVEKFDPSWNEGGLLEVSSFSTLFPQYREKYLQETW-PIVKGALKE 360 +EK D + T+D+ +F + N G ++ P +R L+ W I +++ Sbjct: 49 QEKDDDAEMTLDQDGKPRFASAVNAGEGVKPGRMKVPIPPHRMAPLKNEWMKIYPPLVEQ 108 Query: 361 FGVSCELNLVEGSMTVTTTRKTKDPYIILKARDLIKLLSRSVPAPQAIKVLN-DEMNCDI 537 + +N + + + T T D + K D ++ + A+ ++ DE+ + Sbjct: 109 LKLQVRMNPRKKQLELRTCSNTVDNSALQKGTDFVRAFTLGFDVDDAMAIIRLDELYVET 168 Query: 538 IKIGSIIRNKERFVKRR-ERLLGPNLSTLKAIEILTGCYILVQGNTVAAMGSFKGLKQVR 714 +I + + + R R+ G + T AIE + +++ + + +G F +K R Sbjct: 169 FEIKDVKTLQGDHLGRAIGRIAGKDGKTKFAIENASRTRVVLADSKIHILGGFTNIKIAR 228 Query: 715 RIVEDCI 735 + I Sbjct: 229 EAIVSLI 235
>Q6CUA5:PNO1_KLULA Pre-rRNA-processing protein PNO1 - Kluyveromyces lactis (Yeast)| (Candida sphaerica) Length = 274 Score = 33.1 bits (74), Expect = 3.2 Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 4/160 (2%) Frame = +1 Query: 268 LEVSSFSTLFPQYREKYLQETWPIVKGALKE-FGVSCELNLVEGSMTVTTTRK-TKDPYI 441 +++ S P +R L+ W + L + + +NL S+ + T K T DP Sbjct: 92 VKLESRKVSVPPHRMTPLKNNWSKIYPPLVDHLKLQVRMNLKTKSVELRTHPKHTTDPGA 151 Query: 442 ILKARDLIKLLSRSVPAPQAIKVLN-DEMNCDIIKIGSIIRNKERFVKRR-ERLLGPNLS 615 + K D IK + +I +L D++ + +I + + + R R+ G + Sbjct: 152 LQKGADFIKAFTLGFDLDDSIALLRLDDLYIETFEIKDVKTLQGDHLSRAIGRIAGKDGK 211 Query: 616 TLKAIEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCI 735 T AIE T I++ + + +G F ++ R V I Sbjct: 212 TKFAIENATRTRIVLADSKIHILGGFTHIRMARESVVSLI 251
>Q753C6:PNO1_ASHGO Pre-rRNA-processing protein PNO1 - Ashbya gossypii (Yeast)| (Eremothecium gossypii) Length = 267 Score = 33.1 bits (74), Expect = 3.2 Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 4/150 (2%) Frame = +1 Query: 298 PQYREKYLQETWPIVKGALKE-FGVSCELNLVEGSMTVTT-TRKTKDPYIILKARDLIKL 471 P +R L+ +W + L + + +NL S+ + T R T DP + K D IK Sbjct: 95 PPHRMTPLRNSWTKIYPPLVDHLKLQVRMNLKTKSVELRTHPRHTTDPGALQKGADFIKA 154 Query: 472 LSRSVPAPQAIKVLN-DEMNCDIIKIGSI-IRNKERFVKRRERLLGPNLSTLKAIEILTG 645 + +I +L D++ + +I + + + + R+ G + + AIE T Sbjct: 155 FTLGFDLDDSISLLRLDDLYIETFEIKDVKTLHGDHLSRAIGRIAGKDGKSKFAIENATR 214 Query: 646 CYILVQGNTVAAMGSFKGLKQVRRIVEDCI 735 I++ + + +G F ++ R V I Sbjct: 215 TRIVLADSKIHILGGFTHIRMAREAVVSLI 244
>P14749:AGAL_CYATE Alpha-galactosidase precursor - Cyamopsis tetragonoloba (Guar)| (Cluster bean) Length = 411 Score = 33.1 bits (74), Expect = 3.2 Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 4/124 (3%) Frame = +1 Query: 151 GKNWRRKGKHEKEKPWDDDPTI----DRWTVEKFDPSWNEGGLLEVSSFSTLFPQYREKY 318 G +WR G + E W+ +I D+W WN+ +LEV + +YR + Sbjct: 224 GNSWRTTG--DIEDNWNSMTSIADSNDKWASYAGPGGWNDPDMLEVGNGGMTTEEYRSHF 281 Query: 319 LQETWPIVKGALKEFGVSCELNLVEGSMTVTTTRKTKDPYIILKARDLIKLLSRSVPAPQ 498 W + K L V C++ +M TT + +I +D + + + V + Sbjct: 282 --SIWALAKAPLL---VGCDIR----AMDDTTHELISNAEVIAVNQDKLGVQGKKVKSTN 332 Query: 499 AIKV 510 ++V Sbjct: 333 DLEV 336
>Q9R0I7:YLPM1_MOUSE YLP motif-containing protein 1 - Mus musculus (Mouse)| Length = 1386 Score = 32.0 bits (71), Expect = 7.0 Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 9/68 (13%) Frame = +3 Query: 219 PLDGGEVRPLLERGRPAGSQLLLHPLPPVPR---EVSAGDVAD------REGRAEGVWSL 371 P+ GGE R E P + L H PPVPR + + +V D RE R E + + Sbjct: 1019 PMFGGERRTYPEERMPLPAPALGHQPPPVPRVEKKPESKNVDDILKPPGRESRPERIVVI 1078 Query: 372 MRAQSGGG 395 MR G G Sbjct: 1079 MRGLPGSG 1086
>Q15424:SAFB1_HUMAN Scaffold attachment factor B - Homo sapiens (Human)| Length = 915 Score = 32.0 bits (71), Expect = 7.0 Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 4/86 (4%) Frame = +2 Query: 836 SRTLRKRMSSKRSPIPRRRNNTHPFRHLSSLA----RLIVNWXXXXXXXXXXXXQLRNIK 1003 SR R +S + PR+ ++ + + R+ W + + Sbjct: 596 SREKRSVVSFDKVKEPRKSRDSESHSRVRERSEREQRMQAQWEREERERLEIARERLAFQ 655 Query: 1004 RSRISNQRNQKKREEREKLHLFHQRR 1081 R R+ +R +++R ERE++H+ H+RR Sbjct: 656 RQRLERERMERERLERERMHVEHERR 681
>P07219:PHSA_PHAVU Phaseolin, alpha-type precursor - Phaseolus vulgaris (Kidney bean)| (French bean) Length = 436 Score = 32.0 bits (71), Expect = 7.0 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = +3 Query: 345 GRAEGVWSLMRAQSGGGIHDGYHHQEDQGSLHYSQGQ 455 G E V L+ QSG DG+HHQ++Q + Q Q Sbjct: 390 GSGEEVMKLINKQSGSYFVDGHHHQQEQQKGSHQQEQ 426
>Q6FMB3:PNO1_CANGA Pre-rRNA-processing protein PNO1 - Candida glabrata (Yeast)| (Torulopsis glabrata) Length = 261 Score = 31.6 bits (70), Expect = 9.2 Identities = 32/150 (21%), Positives = 62/150 (41%), Gaps = 4/150 (2%) Frame = +1 Query: 298 PQYREKYLQETW-PIVKGALKEFGVSCELNLVEGSMTVTTTRK-TKDPYIILKARDLIKL 471 P +R L+ +W I + + +NL ++ + T K T DP + K D IK Sbjct: 89 PPHRMTPLRNSWNKIYPPLVDHLKLQVRMNLKTRTVELRTHPKHTTDPGALQKGADFIKA 148 Query: 472 LSRSVPAPQAIKVLN-DEMNCDIIKIGSI-IRNKERFVKRRERLLGPNLSTLKAIEILTG 645 + +I +L D++ + ++ + + + R+ G + T AIE T Sbjct: 149 FTLGFDLDDSIALLRLDDLYIETFEVKDVKTLTGDHLSRAIGRIAGKDGKTKFAIENATR 208 Query: 646 CYILVQGNTVAAMGSFKGLKQVRRIVEDCI 735 I++ + + +G F ++ R V I Sbjct: 209 TRIVLADSKIHILGGFTHIRMAREAVVSLI 238 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 211,949,374 Number of extensions: 4134358 Number of successful extensions: 14170 Number of sequences better than 10.0: 20 Number of HSP's gapped: 14138 Number of HSP's successfully gapped: 20 Length of query: 502 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 385 Effective length of database: 68,593,924 Effective search space: 26408660740 Effective search space used: 26408660740 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
