>Q9W020:NOM1_DROME Nucleolar MIF4G domain-containing protein 1 homolog - Drosophila|
           melanogaster (Fruit fly)
          Length = 854
 Score = 34.7 bits (78), Expect = 0.58
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = +1

Query: 331 FVLSSPKPREKSDELKARLEKLREMQERKEYAELVKDVAPKEENTEPFSSYKD 489
           FVL   + + K +E + R +KL+E QE++E      +   KE+  EP  ++ +
Sbjct: 208 FVLDDEEEKRKWEEKQERKKKLKEQQEKEEAGMWSDEEEDKEDRDEPMDNFSE 260

>P27194:PA_THOGV Polymerase acidic protein - Thogoto virus (isolate SiAr 126) (Tho)|
          Length = 622

 Score = 32.3 bits (72), Expect = 2.9
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +1

Query: 25  SAHQISPPSSPLFVAIWSHPQSEAAAMSAGTATPGLVVTA-TDSIRSFLSSATGSP 189
           S + + PP +      W H QSE   +    +TP  V+T  T S++SF   A G+P
Sbjct: 237 SEYIVCPPGTDQEAISWIHSQSEIECIRESKSTPASVITCLTSSLQSF---AEGNP 289

>O15178:BRAC_HUMAN Brachyury protein - Homo sapiens (Human)|
          Length = 435

 Score = 32.3 bits (72), Expect = 2.9
 Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 7/43 (16%)
 Frame = +1

Query: 7   HP*ILPSAHQISPP-SSPLFVAIWS------HPQSEAAAMSAG 114
           HP +LP +H  SPP SS  + ++WS       P S+AAA+S G
Sbjct: 328 HPSMLPVSHNASPPTSSSQYPSLWSVSNGAVTPGSQAAAVSNG 370

>Q5JHN1:RAD50_PYRKO DNA double-strand break repair rad50 ATPase - Pyrococcus|
           kodakaraensis (Thermococcus kodakaraensis)
          Length = 883

 Score = 31.6 bits (70), Expect = 4.9
 Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
 Frame = +1

Query: 358 EKSDELKARLEKLREMQE-RKEYAELVKDVAPKEENT----EPFSSYKDQLGFG 504
           E+ DE+KA LEKLRE +E RKE A+ ++ +    E      E   +YK+ L  G
Sbjct: 689 ERRDEVKASLEKLREEKETRKEKAKELEKLKKARERVQRLREKVKAYKNLLKEG 742

>Q8TEW8:PAR3L_HUMAN Partitioning-defective 3 homolog B - Homo sapiens (Human)|
          Length = 1205

 Score = 31.6 bits (70), Expect = 4.9
 Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
 Frame = +1

Query: 319  QGAQFVLSSPKPREKSDEL--KAR-LEKLREMQERKEYAEL-VKDVAPKEENTEPFSSYK 486
            QGA    S+P+   + +++  KAR ++K +E +++KE  +L VK+   KEEN +P    K
Sbjct: 809  QGALNCESAPQGNSELEDMENKARKVKKTKEKEKKKEKGKLKVKEKKRKEENEDPERKIK 868

Query: 487  DQLGFG 504
             + GFG
Sbjct: 869  KK-GFG 873

>Q5RAS8:CQ032_PONPY Uncharacterized protein C17orf32 homolog - Pongo pygmaeus|
           (Orangutan)
          Length = 208

 Score = 31.6 bits (70), Expect = 4.9
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = +1

Query: 304 LRQLLQGAQFVLSSPKPREKSDELKARLEKLREMQERKEYAELVKDV 444
           L +LL+G++  L       ++ EL ARLEK++     +EY  + ++V
Sbjct: 76  LHELLEGSEIYLPEVVKPPRNPELVARLEKIKIQLANEEYKRITRNV 122

>Q8N511:CQ032_HUMAN Uncharacterized protein C17orf32 - Homo sapiens (Human)|
          Length = 208

 Score = 31.6 bits (70), Expect = 4.9
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = +1

Query: 304 LRQLLQGAQFVLSSPKPREKSDELKARLEKLREMQERKEYAELVKDV 444
           L +LL+G++  L       ++ EL ARLEK++     +EY  + ++V
Sbjct: 76  LHELLEGSEIYLPEVVKPPRNPELVARLEKIKIQLANEEYKRITRNV 122


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 127,857,596
Number of extensions: 2534086
Number of successful extensions: 7245
Number of sequences better than 10.0: 7
Number of HSP's gapped: 7242
Number of HSP's successfully gapped: 7
Length of query: 317
Length of database: 100,686,439
Length adjustment: 113
Effective length of query: 204
Effective length of database: 69,691,104
Effective search space: 14216985216
Effective search space used: 14216985216
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)