ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf161l13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK100277:Os01g0271700 | 91 | 8e-19 | 2 | AK072685:Os02g0689500 | 31 | 0.76 | 3 | Os03g0166300:Os03g0166300 | 30 | 1.3 | 4 | AK064922:Os01g0686100 | 29 | 2.2 | 5 | Os03g0262300:Os03g0262300 | 29 | 2.9 | 6 | Os04g0140800:Os04g0140800 | 28 | 3.8 | 7 | Os03g0145000:Os03g0145000 | 28 | 3.8 | 8 | Os06g0280500:Os06g0280500 | 28 | 4.9 | 9 | AK120223:Os05g0318700 | 28 | 4.9 | 10 | AK109841:Os12g0464200 | 28 | 4.9 | 11 | AK072312:Os01g0870100 | 28 | 4.9 | 12 | AK067564:Os01g0870100 | 28 | 4.9 | 13 | AK060539:Os01g0821700 | 28 | 4.9 | 14 | Os04g0120000:Os04g0120000 | 27 | 8.4 | 15 | AK109093: | 27 | 8.4 | 16 | AK106450: | 27 | 8.4 | 17 | AK120390:Os09g0472100 | 27 | 8.4 | 18 | AK101244:Os07g0194800 | 27 | 8.4 | 19 | AK100100:Os07g0194800 | 27 | 8.4 | 20 | AK063102:Os02g0551600 | 27 | 8.4 | 21 | AK108563:Os02g0629900 | 27 | 8.5 |
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>AK100277:Os01g0271700 | Length = 53 Score = 90.5 bits (223), Expect = 8e-19 Identities = 41/48 (85%), Positives = 45/48 (93%) Frame = +1 Query: 172 MTQKQTMFKGQTKKKSIPPSRHGKAPHIRKGKRAVKPTKCTKDMDADK 315 MTQKQ+ FKGQ KKK+IPP+RHGKAPH+RKGKRAVKPTK TKDMDADK Sbjct: 1 MTQKQSQFKGQGKKKTIPPNRHGKAPHVRKGKRAVKPTKFTKDMDADK 48
>AK072685:Os02g0689500 | Length = 290 Score = 30.8 bits (68), Expect = 0.76 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = +3 Query: 198 GADQEEVHPSQPPWQGAPHP*R 263 G+D+E P+ PPWQ +P P R Sbjct: 193 GSDEESSSPTDPPWQPSPSPMR 214
>Os03g0166300:Os03g0166300 | Length = 380 Score = 30.0 bits (66), Expect = 1.3 Identities = 16/29 (55%), Positives = 18/29 (62%) Frame = +3 Query: 3 PPTGLPPQPSRNPRQARSRRVSPTAIAGA 89 PP+G PPQP PR R RV+P A A A Sbjct: 296 PPSGHPPQPP-PPRGPRRSRVAPRAAAPA 323
>AK064922:Os01g0686100 | Length = 122 Score = 29.3 bits (64), Expect = 2.2 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 5/48 (10%) Frame = +3 Query: 3 PPTGLPPQPS-----RNPRQARSRRVSPTAIAGALRFSRNPRIPVAEH 131 PP PP P R+PRQ R +S A+ G R + +PVA H Sbjct: 26 PPRPAPPAPGGSPFRRSPRQRRVVPLSAGALPGITRPPPSSLLPVAVH 73
>Os03g0262300:Os03g0262300 | Length = 1300 Score = 28.9 bits (63), Expect = 2.9 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = -1 Query: 94 RRAPAMAVGDTRRLRACLGFRLGWGGSPVGG 2 + P+ A D RLR C+ +L WG GG Sbjct: 22 KATPSPASADGNRLRRCVQSKLSWGPPKAGG 52
>Os04g0140800:Os04g0140800 | Length = 360 Score = 28.5 bits (62), Expect = 3.8 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = -3 Query: 47 LPRVSAWLGRQPSW 6 LP V+AWLGR P W Sbjct: 56 LPAVTAWLGRAPGW 69
>Os03g0145000:Os03g0145000 | Length = 1324 Score = 28.5 bits (62), Expect = 3.8 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = +3 Query: 3 PPTGLPPQPSRNPRQARSRRVSP 71 PP LPP PS +P +ARS R+SP Sbjct: 1051 PPPLLPPPPS-DPAEARSGRLSP 1072
>Os06g0280500:Os06g0280500 | Length = 1168 Score = 28.1 bits (61), Expect = 4.9 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 Query: 3 PPTGLPPQPSRNPRQARSRRVSPTAIAGA 89 PP PPQ PR+ R + +SP A+A A Sbjct: 63 PPPPAPPQSRPAPRRRRRQDLSPLAVAVA 91
>AK120223:Os05g0318700 | Length = 798 Score = 28.1 bits (61), Expect = 4.9 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 4/34 (11%) Frame = +3 Query: 3 PPTGLPPQPSRNPR----QARSRRVSPTAIAGAL 92 PP LPP+P NP + +S+ V+P AI GA+ Sbjct: 418 PP--LPPKPGVNPNGGSSRGKSKSVAPAAIGGAV 449
>AK109841:Os12g0464200 | Length = 178 Score = 28.1 bits (61), Expect = 4.9 Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 2/69 (2%) Frame = +3 Query: 210 EEVHPSQPPWQGAPHP*REEGREADQVHQGHGRRQGPHKVHQPRERNKSCK*S*QRR--W 383 E +PP Q A P E H G R GPH+ H R R++ QRR W Sbjct: 53 ERTDRHRPPVQQAERPPEPE-------HHGAARLAGPHE-HLVRLRHR------QRRGAW 98 Query: 384 RPQHSEVRR 410 P HS R+ Sbjct: 99 TPVHSRRRQ 107
>AK072312:Os01g0870100 | Length = 943 Score = 28.1 bits (61), Expect = 4.9 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = +3 Query: 6 PTGLPPQPSRNPRQARSRRVSPTAIAGALRFSRNP 110 P+ L P SR PR RS++ +PT A A SR+P Sbjct: 104 PSFLGPHASR-PRPPRSQQQTPTTTAAAAADSRSP 137
>AK067564:Os01g0870100 | Length = 965 Score = 28.1 bits (61), Expect = 4.9 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = +3 Query: 6 PTGLPPQPSRNPRQARSRRVSPTAIAGALRFSRNP 110 P+ L P SR PR RS++ +PT A A SR+P Sbjct: 104 PSFLGPHASR-PRPPRSQQQTPTTTAAAAADSRSP 137
>AK060539:Os01g0821700 | Length = 155 Score = 28.1 bits (61), Expect = 4.9 Identities = 14/23 (60%), Positives = 15/23 (65%) Frame = +3 Query: 15 LPPQPSRNPRQARSRRVSPTAIA 83 LPP SR+PR AR RR P A A Sbjct: 16 LPPFSSRSPRAARLRRRVPAAAA 38
>Os04g0120000:Os04g0120000 | Length = 2422 Score = 27.3 bits (59), Expect = 8.4 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%) Frame = +3 Query: 3 PPTGLPPQPSRNPRQARSRR--VSPTAIAGA 89 PP PPQ PR+ R RR +SP A+A A Sbjct: 63 PPPPAPPQSRPAPRRRRRRRQDLSPLAVAVA 93
>AK109093: | Length = 351 Score = 27.3 bits (59), Expect = 8.4 Identities = 31/127 (24%), Positives = 38/127 (29%), Gaps = 21/127 (16%) Frame = +3 Query: 3 PPTGLPPQPSR---------NPRQARS--------RRVSPTA---IAGALRFSRNPRIPV 122 PP G P+ S NP ARS R P A G + +NP I Sbjct: 39 PPPGQDPRSSNLTPTSDYSLNPSSARSGSFPDYIQRSYQPGAQGQAPGGMAQQQNPSIAA 98 Query: 123 AEHHNXXXXXXXXXXXXXXXXXHVQGADQEEVHPSQPPWQGA-PHP*REEGREADQVHQG 299 A H G Q ++ S+P W G P P +H Sbjct: 99 ATSPTYSHQQQYSPYTPHHDMQHYPGHPQTPIYASRPEWAGQYPQP---------GMHYA 149 Query: 300 HGRRQGP 320 H GP Sbjct: 150 HPASSGP 156
>AK106450: | Length = 284 Score = 27.3 bits (59), Expect = 8.4 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = +3 Query: 3 PPTGLPPQPSRNPRQARSRRVSPTAIAGALRFSRNPRIP 119 P PP P+R PR+ R RR + T A A +R P P Sbjct: 11 PCRSSPPAPARRPRRIRRRRRTRTRRAAAT--TRRPPPP 47
>AK120390:Os09g0472100 | Length = 721 Score = 27.3 bits (59), Expect = 8.4 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 Query: 222 PSQPPWQGAPHP*REEGREADQVHQ 296 P+ P W+ P P R +GREAD V Q Sbjct: 8 PTVPRWK--PSPPRPQGREADDVDQ 30
>AK101244:Os07g0194800 | Length = 294 Score = 27.3 bits (59), Expect = 8.4 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = +3 Query: 3 PPTGLPPQPSRNPRQARSRRVSPTAIAGALRFSRNPRIP 119 PP PP PSR A + +P A R R PR+P Sbjct: 5 PPLPPPPPPSRTFHDAAAAAEAPRPRGPAPRRRRLPRLP 43
>AK100100:Os07g0194800 | Length = 295 Score = 27.3 bits (59), Expect = 8.4 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = +3 Query: 3 PPTGLPPQPSRNPRQARSRRVSPTAIAGALRFSRNPRIP 119 PP PP PSR A + +P A R R PR+P Sbjct: 6 PPLPPPPPPSRTFHDAAAAAEAPRPRGPAPRRRRLPRLP 44
>AK063102:Os02g0551600 | Length = 216 Score = 27.3 bits (59), Expect = 8.4 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +3 Query: 3 PPTGLPPQPSRNPRQARSRRVSPTAIAG 86 PP PP + PR+ R RR+ P++ G Sbjct: 7 PPPPPPPATTATPRRRRRRRLLPSSAGG 34
>AK108563:Os02g0629900 | Length = 115 Score = 27.3 bits (59), Expect = 8.5 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = -1 Query: 316 PCRRPCPWCTWSASRPSSLYGCGAP 242 P RRPC TW+ +P S G P Sbjct: 48 PARRPCTPATWTGRKPGSGGARGRP 72 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 17,078,362 Number of extensions: 380120 Number of successful extensions: 1412 Number of sequences better than 10.0: 21 Number of HSP's gapped: 1410 Number of HSP's successfully gapped: 21 Length of query: 208 Length of database: 15,399,855 Length adjustment: 96 Effective length of query: 112 Effective length of database: 11,555,919 Effective search space: 1294262928 Effective search space used: 1294262928 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
